Comparison of KIAA cDNA sequences between mouse and human (KIAA0109)
<<Original sequence data>>
mouse mKIAA0109 (msj02122) length: 2007 bp, CDS: 88 - 1398
human KIAA0109 (ha01466) length: 1868 bp, CDS: 78 - 1394
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 12 - 88 62 15 19.5
CDS: 89 - 1405 1213 99 7.5
3'UTR: 1406 - 1884 370 97 20.8
amino acid
CDS: 89 - 1405 434 5 1.1
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
msj02122 1 ATCTTGGGATCCGAGAGTGGCCAGGCCGGCCTTG.TGGGGGCTGCTGACT 49
|||||||||| ||||||| | |||||| | |||
ha01466 1 ...........GGAGAGTGGCCGGGCCGGCAGAGCAGGGGGCCGAGGACA 39
51 ----+----*----+----*----+----*----+----*----+----* 100
A A T M
msj02122 50 CCAGGTCTGTTCTCAGAGCAATGGGTCACAGAGACTGAGCTGCCACCATG 99
||||||||||||||||||| ||||| | | |||||||| ||||| |||||
ha01466 40 CCAGGTCTGTTCTCAGAGCGATGGGCCGCGGAGACTGATCTGCCGCCATG 89
S A A M
101 ----+----*----+----*----+----*----+----*----+----* 150
I G G L F I Y N H K G E V L I S R
msj02122 100 ATCGGAGGCTTATTCATCTATAATCACAAGGGGGAGGTGCTTATCTCCCG 149
|| |||||||||||||||||||||||||||||||||||||| ||||||||
ha01466 90 ATTGGAGGCTTATTCATCTATAATCACAAGGGGGAGGTGCTCATCTCCCG 139
I G G L F I Y N H K G E V L I S R
151 ----+----*----+----*----+----*----+----*----+----* 200
V Y R D D I G R N A V D A F R V N
msj02122 150 GGTCTACAGAGATGACATCGGGAGGAATGCTGTGGATGCCTTTCGGGTCA 199
|||||| ||||||||||||||||||| || |||||||||||||||||||
ha01466 140 AGTCTACCGAGATGACATCGGGAGGAACGCAGTGGATGCCTTTCGGGTCA 189
V Y R D D I G R N A V D A F R V N
201 ----+----*----+----*----+----*----+----*----+----* 250
V I H A R Q Q V R S P V T N I A
msj02122 200 ATGTCATTCATGCACGGCAGCAGGTGCGCAGCCCTGTCACAAACATCGCT 249
|||| || ||||| |||||||||||||||||||| ||||| ||||| |||
ha01466 190 ATGTTATCCATGCCCGGCAGCAGGTGCGCAGCCCCGTCACCAACATTGCT 239
V I H A R Q Q V R S P V T N I A
251 ----+----*----+----*----+----*----+----*----+----* 300
R T S F F H V K R S N I W L A A V
msj02122 250 CGCACCAGCTTCTTCCATGTTAAGCGGTCCAACATCTGGCTGGCCGCAGT 299
||||||||||||||||| ||||||||||||||||| |||||||| |||||
ha01466 240 CGCACCAGCTTCTTCCACGTTAAGCGGTCCAACATTTGGCTGGCAGCAGT 289
R T S F F H V K R S N I W L A A V
301 ----+----*----+----*----+----*----+----*----+----* 350
T K Q N V N A A M V F E F L Y K M
msj02122 300 CACCAAGCAGAATGTCAATGCTGCCATGGTCTTCGAATTCCTCTACAAGA 349
|||||||||||||||||| |||||||||||||||||||||||||| ||||
ha01466 290 CACCAAGCAGAATGTCAACGCTGCCATGGTCTTCGAATTCCTCTATAAGA 339
T K Q N V N A A M V F E F L Y K M
351 ----+----*----+----*----+----*----+----*----+----* 400
C D V M A A Y F G K I S E E N I
msj02122 350 TGTGTGATGTAATGGCTGCTTACTTTGGCAAAATCAGCGAGGAGAACATC 399
||||||| || |||||||| ||||||||||| ||||||||||| ||||||
ha01466 340 TGTGTGACGTGATGGCTGCCTACTTTGGCAAGATCAGCGAGGAAAACATC 389
C D V M A A Y F G K I S E E N I
401 ----+----*----+----*----+----*----+----*----+----* 450
K N N F V L I Y E L L D E I L D F
msj02122 400 AAGAACAATTTTGTGCTCATATACGAGCTGCTGGATGAGATTCTGGACTT 449
||||||||||||||||||||||| |||||||||||||||||||| |||||
ha01466 390 AAGAACAATTTTGTGCTCATATATGAGCTGCTGGATGAGATTCTAGACTT 439
K N N F V L I Y E L L D E I L D F
451 ----+----*----+----*----+----*----+----*----+----* 500
G Y P Q N S E T G A L K T F I T Q
msj02122 450 TGGCTACCCACAGAACTCAGAGACAGGTGCACTGAAAACCTTCATCACCC 499
||||||||||||||| || |||||||| || ||||||||||||||||| |
ha01466 440 TGGCTACCCACAGAATTCCGAGACAGGCGCGCTGAAAACCTTCATCACGC 489
G Y P Q N S E T G A L K T F I T Q
501 ----+----*----+----*----+----*----+----*----+----* 550
Q G I K - Q T K E E Q S Q I
msj02122 500 AGCAGGGTATCAAGAG......TCAGACGAAGGAAGAACAGTCCCAGATC 543
||||||| |||||||| |||||| || ||||| ||||| ||||||
ha01466 490 AGCAGGGCATCAAGAGTCAGCATCAGACAAAAGAAGAGCAGTCACAGATC 539
Q G I K S Q H Q T K E E Q S Q I
551 ----+----*----+----*----+----*----+----*----+----* 600
T S Q V T G Q I G W R R E G I K Y
msj02122 544 ACCAGCCAGGTGACCGGGCAGATTGGCTGGCGGCGAGAAGGCATCAAGTA 593
||||||||||| || ||||||||||||||||||||||| || ||||||||
ha01466 540 ACCAGCCAGGTAACTGGGCAGATTGGCTGGCGGCGAGAGGGTATCAAGTA 589
T S Q V T G Q I G W R R E G I K Y
601 ----+----*----+----*----+----*----+----*----+----* 650
R R N E L F L D V L E S V N L L M
msj02122 594 TCGCCGGAATGAACTCTTCCTAGATGTTCTGGAGAGTGTGAACCTGCTTA 643
||| |||||||| |||||||| ||||| |||||||||||||||||||| |
ha01466 590 TCGTCGGAATGAGCTCTTCCTGGATGTGCTGGAGAGTGTGAACCTGCTCA 639
R R N E L F L D V L E S V N L L M
651 ----+----*----+----*----+----*----+----*----+----* 700
S P Q G Q V L S A H V S G R V V
msj02122 644 TGTCCCCACAGGGGCAGGTGCTGAGTGCCCATGTGTCAGGCCGGGTGGTG 693
|||||||||| |||||||||||||||||||||||||| ||||||||||||
ha01466 640 TGTCCCCACAAGGGCAGGTGCTGAGTGCCCATGTGTCGGGCCGGGTGGTG 689
S P Q G Q V L S A H V S G R V V
701 ----+----*----+----*----+----*----+----*----+----* 750
M K S Y L S G M P E C K F G M N D
msj02122 694 ATGAAGAGTTACCTGAGTGGCATGCCTGAGTGCAAGTTTGGAATGAATGA 743
|||||||| |||||||||||||||||||| ||||||||||| ||||||||
ha01466 690 ATGAAGAGCTACCTGAGTGGCATGCCTGAATGCAAGTTTGGGATGAATGA 739
M K S Y L S G M P E C K F G M N D
751 ----+----*----+----*----+----*----+----*----+----* 800
K I V I E K Q G K G T A D E T S K
msj02122 744 CAAGATTGTCATAGAAAAGCAGGGCAAAGGCACAGCTGATGAAACAAGCA 793
||||||||| || |||||||||||||||||||||||||||||||||||||
ha01466 740 CAAGATTGTTATTGAAAAGCAGGGCAAAGGCACAGCTGATGAAACAAGCA 789
K I V I E K Q G K G T A D E T S K
801 ----+----*----+----*----+----*----+----*----+----* 850
S G K Q S I A I D D C T F H Q C
msj02122 794 AGAGTGGTAAGCAGTCGATCGCCATTGATGACTGCACCTTCCACCAGTGT 843
|||| || ||||| || || ||||||||||||||||||||||||||||||
ha01466 790 AGAGCGGGAAGCAATCAATTGCCATTGATGACTGCACCTTCCACCAGTGT 839
S G K Q S I A I D D C T F H Q C
851 ----+----*----+----*----+----*----+----*----+----* 900
V R L S K F D S E R S I S F I P P
msj02122 844 GTGCGACTCAGCAAGTTTGACTCTGAGCGGAGCATCAGCTTCATCCCTCC 893
|||||||||||||||||||||||||| || ||||||||||| ||||| ||
ha01466 840 GTGCGACTCAGCAAGTTTGACTCTGAACGCAGCATCAGCTTTATCCCGCC 889
V R L S K F D S E R S I S F I P P
901 ----+----*----+----*----+----*----+----*----+----* 950
D G E F E L M R Y R T T K D I I L
msj02122 894 CGACGGAGAGTTTGAACTCATGAGATACCGTACTACCAAGGACATCATCC 943
|| ||||||||||| || ||||| || || || ||||||||||||||||
ha01466 890 AGATGGAGAGTTTGAGCTTATGAGGTATCGCACAACCAAGGACATCATCC 939
D G E F E L M R Y R T T K D I I L
951 ----+----*----+----*----+----*----+----*----+----* 1000
P F R V I P L V R E V G R T K L
msj02122 944 TTCCTTTCCGGGTGATCCCATTGGTGCGGGAGGTGGGGCGCACCAAACTG 993
|||| |||||||||||||| | ||||| || ||||| ||||||||||||
ha01466 940 TTCCCTTCCGGGTGATCCCGCTAGTGCGAGAAGTGGGACGCACCAAACTG 989
P F R V I P L V R E V G R T K L
1001 ----+----*----+----*----+----*----+----*----+----* 1050
E V K V V I K S N F K P S L L A Q
msj02122 994 GAGGTCAAGGTGGTCATCAAGTCCAACTTCAAGCCCTCACTTCTGGCCCA 1043
||||||||||||||||||||||||||||| || |||||||| ||||| ||
ha01466 990 GAGGTCAAGGTGGTCATCAAGTCCAACTTTAAACCCTCACTGCTGGCTCA 1039
E V K V V I K S N F K P S L L A Q
1051 ----+----*----+----*----+----*----+----*----+----* 1100
K I E V R I P T P L N T S G V Q V
msj02122 1044 GAAGATTGAGGTGAGGATCCCGACTCCATTGAACACAAGCGGGGTACAGG 1093
|||||| |||||||||||||| || ||| |||||||||||||||| ||||
ha01466 1040 GAAGATCGAGGTGAGGATCCCAACCCCACTGAACACAAGCGGGGTGCAGG 1089
K I E V R I P T P L N T S G V Q V
1101 ----+----*----+----*----+----*----+----*----+----* 1150
I C M K G K A K Y K A S E N A I
msj02122 1094 TGATCTGCATGAAGGGGAAGGCCAAGTACAAGGCCAGCGAGAACGCCATT 1143
||||||||||||||||||||||||||||||||||||||||||| |||||
ha01466 1090 TGATCTGCATGAAGGGGAAGGCCAAGTACAAGGCCAGCGAGAATGCCATC 1139
I C M K G K A K Y K A S E N A I
1151 ----+----*----+----*----+----*----+----*----+----* 1200
V W K I K R M A G M K E S Q I S A
msj02122 1144 GTATGGAAGATCAAGCGCATGGCAGGCATGAAGGAATCCCAGATCAGCGC 1193
|| ||||||||||||||||||||||||||||||||||| |||||||||||
ha01466 1140 GTGTGGAAGATCAAGCGCATGGCAGGCATGAAGGAATCGCAGATCAGCGC 1189
V W K I K R M A G M K E S Q I S A
1201 ----+----*----+----*----+----*----+----*----+----* 1250
E I E L L P T N D K K K W A R P P
msj02122 1194 AGAGATTGAGCTCCTGCCCACCAACGATAAGAAGAAATGGGCTCGGCCCC 1243
|||||||||||| ||||| |||||||| ||||||||||||||||| ||||
ha01466 1190 AGAGATTGAGCTTCTGCCTACCAACGACAAGAAGAAATGGGCTCGACCCC 1239
E I E L L P T N D K K K W A R P P
1251 ----+----*----+----*----+----*----+----*----+----* 1300
I S M N F E V P F A P S G L K V
msj02122 1244 CCATTTCCATGAACTTTGAGGTGCCATTCGCGCCTTCTGGCCTCAAGGTG 1293
|||||||||||||||||||||||||||||||||| |||||||||||||||
ha01466 1240 CCATTTCCATGAACTTTGAGGTGCCATTCGCGCCCTCTGGCCTCAAGGTG 1289
I S M N F E V P F A P S G L K V
1301 ----+----*----+----*----+----*----+----*----+----* 1350
R Y L K V F E P K L N Y S D H D V
msj02122 1294 CGCTACTTGAAGGTATTCGAACCGAAGCTGAACTACAGCGACCATGATGT 1343
|||||||||||||| || ||||||||||||||||||||||||||||||||
ha01466 1290 CGCTACTTGAAGGTGTTTGAACCGAAGCTGAACTACAGCGACCATGATGT 1339
R Y L K V F E P K L N Y S D H D V
1351 ----+----*----+----*----+----*----+----*----+----* 1400
I K W V R Y I G R S G I Y E T R C
msj02122 1344 CATCAAATGGGTGCGATACATTGGCCGCAGTGGCATTTATGAAACCCGCT 1393
||||||||||||||| ||||||||||||||||||||||||||||| ||||
ha01466 1340 CATCAAATGGGTGCGCTACATTGGCCGCAGTGGCATTTATGAAACTCGCT 1389
I K W V R Y I G R S G I Y E T R C
1401 ----+----*----+----*----+----*----+----*----+----* 1450
*
msj02122 1394 GCTAGCTGCCTAGTTGCAGCTGGCCCACCTCCCTACCCACCCTTC.CCAC 1442
|||||||||| |||||| ||||||||||| | ||||||| | ||||
ha01466 1390 GCTAGCTGCCACTAGGCAGCTAGCCCACCTCCCCAGCCACCCTCCTCCAC 1439
*
1451 ----+----*----+----*----+----*----+----*----+----* 1500
msj02122 1443 AGGTCCAAGTACCCCT.....AGTGACCACTCACCAGTGTCGTTCCTCCG 1487
||||||| || || || ||||| || ||||||| ||||||
ha01466 1440 AGGTCCAGGTGCCGCTCCCTCCCCCACCACACATCAGTGTC..TCCTCCC 1487
1501 ----+----*----+----*----+----*----+----*----+----* 1550
msj02122 1488 TCCTGCTCTGCTGCCTTTCCTTTCCAATAGCCCCTGAGTATAAGTCTGAA 1537
||||||| ||||||||| ||||| || ||||| |||| || |||||
ha01466 1488 TCCTGCTTTGCTGCCTTCCCTTTGCACCAGCCC..GAGTCTAGGTCTGGG 1535
1551 ----+----*----+----*----+----*----+----*----+----* 1600
msj02122 1538 CCAGCCACACCAC.AGTGGAACTGGTCAGGTAGTGCCT.GGCTTCCTGGG 1585
||| |||| || ||||| || ||| | || ||| |||| ||||||
ha01466 1536 CCAAGCACATTACAAGTGGGACCGGTGGAGCAGCCCCTGGGCTCCCTGGG 1585
1601 ----+----*----+----*----+----*----+----*----+----* 1650
msj02122 1586 AGGGTGGTTTTTGAGGCT.......TCTCTTCCGTCTGTCTGTCCTGGCT 1628
|| | || ||||||| || | ||| ||||||||||||||
ha01466 1586 CAGGGGAGTTCTGAGGCTCCTGCTCTCCCATCCACCTGTCTGTCCTGGCC 1635
1651 ----+----*----+----*----+----*----+----*----+----* 1700
msj02122 1629 TAGCGCCAGGCCCTGAGTTTTGTGACCAAAGCCAGGT.GCTCTCCTCTTC 1677
|| ||||||| ||||||| ||||||||||||||||| | | ||| | |
ha01466 1636 TAATGCCAGGCTCTGAGTTCTGTGACCAAAGCCAGGTGGGTTCCCTTTCC 1685
1701 ----+----*----+----*----+----*----+----*----+----* 1750
msj02122 1678 TCTCTACCCCTGTGGCCACACCTCTGCAGTGGGAAGGTTGACTACCCCTC 1727
| | |||||||||| |||| ||||| ||||||| ||||| | ||||||
ha01466 1686 TTCCCACCCCTGTGGACACAGCTCTGGAGTGGGAGGGTTGGTTGCCCCTC 1735
1751 ----+----*----+----*----+----*----+----*----+----* 1800
msj02122 1728 ACCTCAGAGCTTCCCCAAAGGCCAGTAACAGATCCCCAGTCTTTAGTCCC 1777
||||||||||| |||||||||||||||| ||||||| | | | ||||||
ha01466 1736 ACCTCAGAGCTCCCCCAAAGGCCAGTAATGGATCCCC.GGCCTCAGTCCC 1784
1801 ----+----*----+----*----+----*----+----*----+----* 1850
msj02122 1778 CACTCTGCTTTGGGATAGTATGAGCTTCGTTTTGTACACGTGTGACTTTG 1827
|||||||||||||||||| |||||||| ||||||||||||||||||| |
ha01466 1785 TACTCTGCTTTGGGATAGTGTGAGCTTCATTTTGTACACGTGTGACTTCG 1834
1851 ----+----*----+----*----+----*----+----*----+----* 1900
msj02122 1828 TCCAGTTACAAACCCAATAAACAATAGAGTGGAGTTGCTGGCTAAATGTT 1877
|||||||||||||||||||||| | || | |
ha01466 1835 TCCAGTTACAAACCCAATAAACTCTGTAGAGTGG................ 1868
1901 ----+----*----+----*----+----*----+----*----+----* 1950
msj02122 1878 AATGGGGCCCGCAGAGGGTCTGACGGGACTATTATTACTCCATGCAGTTC 1927
ha01466 1869 .................................................. 1869
1951 ----+----*----+----*----+----*----+----*----+----* 2000
msj02122 1928 TGGCTGTCCTGGAACCTGTGTGTAGGCTCAGGAGATCTACTTCCTGAGTG 1977
ha01466 1869 .................................................. 1869
2001 ----+----*----+----*----+----* 2030
msj02122 1978 CTGAGATTAAAGTGTACACCACCATGCCAG 2007
ha01466 1869 .............................. 1869