Comparison of KIAA cDNA sequences between mouse and human (KIAA0112)
<<Original sequence data>>
mouse mKIAA0112 (msj01112) length: 2010 bp, CDS: 54 - 1175
human KIAA0112 (ha00609) length: 1696 bp, CDS: 3 - 1202
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 34 - 86 31 22 41.5
CDS: 87 - 1208 981 136 12.2
3'UTR: 1209 - 2066 278 208 42.8
amino acid
CDS: 87 - 1208 335 37 9.9
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
V * G A A
msj01112 1 .................................CGGTTTAGGGTGCTGCT 17
|||| || || ||
ha00609 1 GCATCCCGGCATCTGCACGTGGTTATGCTGCCGGAGTTTGGGCCGCCACT 50
I P A S A R G Y A A G V W A A T
51 ----+----*----+----*----+----*----+----*----+----* 100
V V A I R P A A V P K * G I R A G
msj01112 18 GTAGTGGCGATACGTCCCGCCGCTGTCCCGAAGTGAGGGATCCGAGCCGC 67
|||| || | | || || | ||| ||| ||| || ||||||||
ha00609 51 GTAGGAAAAGTAACTTCAGCTGCAGCCCCAAAGCGAGTGAGCCGAGCCG. 99
V G K V T S A A A P K R V S R A G
101 ----+----*----+----*----+----*----+----*----+----* 150
A M E G Q R V E E L L A K A E
msj01112 68 AGCGAGAGCCATGGAGGGCCAGCGCGTGGAGGAGCTGCTGGCCAAGGCAG 117
||||||||||||||||| |||||||||||||||| || |||||||
ha00609 100 .....GAGCCATGGAGGGCCAGAGCGTGGAGGAGCTGCTCGCAAAGGCAG 144
A M E G Q S V E E L L A K A E
151 ----+----*----+----*----+----*----+----*----+----* 200
Q E E A E K L Q R I T V H K E L
msj01112 118 AGCAGGAGGAGGCGGAGAAGCTGCAGCGCATCACGGTGCACAAGGAGCTG 167
||||||| ||||| |||||| |||| ||||||||||||||||||||||||
ha00609 145 AGCAGGACGAGGCAGAGAAGTTGCAACGCATCACGGTGCACAAGGAGCTG 194
Q D E A E K L Q R I T V H K E L
201 ----+----*----+----*----+----*----+----*----+----* 250
E L E F D L G N L L A S D R N P P
msj01112 168 GAGCTGGAGTTCGACCTGGGCAACCTGCTGGCTTCGGACCGCAACCCCCC 217
|||||| |||| |||||||||||||||||||| |||||||| ||||||||
ha00609 195 GAGCTGCAGTTTGACCTGGGCAACCTGCTGGCGTCGGACCGGAACCCCCC 244
E L Q F D L G N L L A S D R N P P
251 ----+----*----+----*----+----*----+----*----+----* 300
T V L R Q A G P S P E A E L R A L
msj01112 218 GACCGTGCTGCGCCAGGCCGGGCCGTCGCCGGAGGCCGAGCTGCGGGCCC 267
||||| |||||| ||||| || |||||||||||||||| | |||||
ha00609 245 GACCGGGCTGCGGTGCGCCGGACCCACGCCGGAGGCCGAGCTACAGGCCC 294
T G L R C A G P T P E A E L Q A L
301 ----+----*----+----*----+----*----+----*----+----* 350
A R D N T Q L L I N Q L W R L P
msj01112 268 TGGCGCGGGACAACACGCAGCTGCTCATCAACCAGCTGTGGCGGCTGCCG 317
||||||||||||||||||| |||||||||||||||||||||| ||||||
ha00609 295 TGGCGCGGGACAACACGCAACTGCTCATCAACCAGCTGTGGCAGCTGCCC 344
A R D N T Q L L I N Q L W Q L P
351 ----+----*----+----*----+----*----+----*----+----* 400
T E R V E E A V V A R L P E P A T
msj01112 318 ACCGAGCGCGTGGAGGAGGCGGTGGTCGCGCGCTTGCCGGAGCCCGCCAC 367
|| ||||||||||| |||||| | || ||||| ||||||||||| ||||
ha00609 345 ACGGAGCGCGTGGAAGAGGCGATAGTGGCGCGGCTGCCGGAGCCCACCAC 394
T E R V E E A I V A R L P E P T T
401 ----+----*----+----*----+----*----+----*----+----* 450
R L P R E K P L P R P R P L T R W
msj01112 368 TCGCCTGCCCCGCGAGAAGCCGCTGCCCCGACCACGGCCGCTCACCCGCT 417
|||||||| || |||||||| ||||||||||| ||||| || || ||||
ha00609 395 ACGCCTGCCGCGAGAGAAGCCTCTGCCCCGACCGCGGCCACTTACACGCT 444
R L P R E K P L P R P R P L T R W
451 ----+----*----+----*----+----*----+----*----+----* 500
Q Q F A R L K G I R P K K K T N
msj01112 418 GGCAGCAGTTCGCGCGCCTTAAGGGAATCCGTCCCAAGAAGAAGACCAAC 467
||||||||||||||||||| ||||| ||||||||||||||||||||||||
ha00609 445 GGCAGCAGTTCGCGCGCCTCAAGGGCATCCGTCCCAAGAAGAAGACCAAC 494
Q Q F A R L K G I R P K K K T N
501 ----+----*----+----*----+----*----+----*----+----* 550
L V W D E A S G Q W R R R W G Y K
msj01112 468 CTCGTGTGGGACGAGGCGAGTGGCCAGTGGCGGCGCCGTTGGGGCTACAA 517
|| ||||||||||||| |||||||||||||||||| || ||||||||| |
ha00609 495 CTGGTGTGGGACGAGGTGAGTGGCCAGTGGCGGCGGCGCTGGGGCTACCA 544
L V W D E V S G Q W R R R W G Y Q
551 ----+----*----+----*----+----*----+----*----+----* 600
R A R D D T K E W L I E V P G S A
msj01112 518 GCGCGCCCGGGATGACACTAAAGAATGGCTGATCGAGGTGCCTGGGAGCG 567
|||||||||||| ||||| |||||||||||||| |||||||| || | |
ha00609 545 GCGCGCCCGGGACGACACCAAAGAATGGCTGATTGAGGTGCCCGGCAATG 594
R A R D D T K E W L I E V P G N A
601 ----+----*----+----*----+----*----+----*----+----* 650
D P M E D Q F A K R T Q A K K E
msj01112 568 CCGACCCCATGGAAGACCAGTTCGCCAAGAGGACTCAGGCCAAGAAAGAA 617
|||||||| |||| ||||||||||||||| ||| |||||||||||| |||
ha00609 595 CCGACCCCTTGGAGGACCAGTTCGCCAAGCGGATTCAGGCCAAGAAGGAA 644
D P L E D Q F A K R I Q A K K E
651 ----+----*----+----*----+----*----+----*----+----* 700
R V A K N E L N R L R N L A R A H
msj01112 618 CGCGTGGCCAAGAATGAGCTGAACCGTCTGCGGAACCTGGCTCGCGCGCA 667
| ||||||||||| ||||||||||| ||||| |||||||| ||||||||
ha00609 645 AGGGTGGCCAAGAACGAGCTGAACCGGCTGCGTAACCTGGCCCGCGCGCA 694
R V A K N E L N R L R N L A R A H
701 ----+----*----+----*----+----*----+----*----+----* 750
K M Q M P S S A G L H P T G H Q S
msj01112 668 CAAGATGCAGATGCCCAGCTCAGCCGGCCTGCACCCTACTGGACACCAGA 717
|||||||||| |||||||| | |||||| |||||||||| ||||||||||
ha00609 695 CAAGATGCAGCTGCCCAGCGCGGCCGGCTTGCACCCTACCGGACACCAGA 744
K M Q L P S A A G L H P T G H Q S
751 ----+----*----+----*----+----*----+----*----+----* 800
K E E L G R A M Q V A K V S T A
msj01112 718 GTAAGGAAGAGCTGGGCCGCGCCATGCAAGTGGCCAAGGTTTCCACCGCT 767
||||||| |||||||||||||||||||||||||||||||| ||||||||
ha00609 745 GTAAGGAGGAGCTGGGCCGCGCCATGCAAGTGGCCAAGGTCTCCACCGCC 794
K E E L G R A M Q V A K V S T A
801 ----+----*----+----*----+----*----+----*----+----* 850
S V G R F Q E R L P K E K A P R G
msj01112 768 TCGGTGGGACGCTTCCAGGAGCGCCTTCCCAAGGAGAAAGCTCCCCGGGG 817
|| ||||| ||||| ||||||||||| ||||||||||| | ||||||||
ha00609 795 TCTGTGGGGCGCTTTCAGGAGCGCCTCCCCAAGGAGAAGGTGCCCCGGGG 844
S V G R F Q E R L P K E K V P R G
851 ----+----*----+----*----+----*----+----*----+----* 900
S G K K R K F Q P L F G D F A A E
msj01112 818 CTCCGGCAAGAAGAGGAAGTTTCAGCCCCTCTTTGGGGACTTCGCAGCCG 867
|||||||||||| ||||||||||| ||||| || |||||||| |||||||
ha00609 845 CTCCGGCAAGAAAAGGAAGTTTCAACCCCTTTTCGGGGACTTTGCAGCCG 894
S G K K R K F Q P L F G D F A A E
901 ----+----*----+----*----+----*----+----*----+----* 950
K K N Q L E L L R V M N S K K P
msj01112 868 AGAAAAAGAACCAGTTGGAGCTACTTCGAGTCATGAACAGCAAGAAACCT 917
|||||||||||||||||||||| ||||| ||||||||||||||||| |||
ha00609 895 AGAAAAAGAACCAGTTGGAGCTGCTTCGTGTCATGAACAGCAAGAAGCCT 944
K K N Q L E L L R V M N S K K P
951 ----+----*----+----*----+----*----+----*----+----* 1000
R L D V T R A T N K Q M R E E D Q
msj01112 918 CGGCTGGACGTGACGAGGGCCACCAACAAGCAGATGAGGGAAGAGGACCA 967
| |||||| ||||| ||||||||||| |||||||||||||| ||||||||
ha00609 945 CAGCTGGATGTGACTAGGGCCACCAATAAGCAGATGAGGGAGGAGGACCA 994
Q L D V T R A T N K Q M R E E D Q
1001 ----+----*----+----*----+----*----+----*----+----* 1050
E E A A K R R K M S Q K G K R K G
msj01112 968 GGAGGAGGCTGCCAAGAGGAGGAAAATGAGCCAGAAAGGCAAGAGGAAAG 1017
||||||||| |||||||||||||||||||||||||| |||||||| || |
ha00609 995 GGAGGAGGCCGCCAAGAGGAGGAAAATGAGCCAGAAGGGCAAGAGAAAGG 1044
E E A A K R R K M S Q K G K R K G
1051 ----+----*----+----*----+----*----+----*----+----* 1100
G R Q G P S G K R K G G P P G Q
msj01112 1018 GGGGCCGGCAAGGACCTTCGGGCAAGAGAAAGGGCGGCCCGCCGGGTCAG 1067
| |||||||| || ||| ||||||||| || || |||||||| | |||
ha00609 1045 GAGGCCGGCAGGGGCCTGGGGGCAAGAGGAAAGGGGGCCCGCCCAGCCAG 1094
G R Q G P G G K R K G G P P S Q
1101 ----+----*----+----*----+----*----+----*----+----* 1150
G E K R K G G L G S K K H S W P S
msj01112 1068 GGAGAAAAGAGGAAAGGAGGCTTGGGAAGCAAAAAGCATTCCTGGCCTTC 1117
|||| ||||||||||| ||||||||| |||| | | |||| |||| |
ha00609 1095 GGAGGGAAGAGGAAAGGGGGCTTGGGAGGCAAGATGAATTCTGGGCCGCC 1144
G G K R K G G L G G K M N S G P P
1151 ----+----*----+----*----+----*----+----*----+----* 1200
A L A G K K K G V P P Q G G K R R
msj01112 1118 TGCTTTAGCTGGCAAGAAGAAAGGAGTGCCGCCCCAAGGTGGGAAGAGGA 1167
|| || | |||||||| ||||||| | || || ||| || |||||||
ha00609 1145 TGGCTTGGGTGGCAAGAGAAAAGGAGGACAGCGCCCAGGAGGAAAGAGGA 1194
G L G G K R K G G Q R P G G K R R
1201 ----+----*----+----*----+----*----+----*----+----* 1250
K -
msj01112 1168 GGAAGTA..GCGTTCTCCCCTCGGGACCAGTTCTGAAAAGCTGGGACT.. 1213
||||||| |||| | ||||| || ||| ||| | |||||
ha00609 1195 GGAAGTAATAGTTTCTAACTGTCGGACCCGT.CTGTAAACCAAGGACTAT 1243
K *
1251 ----+----*----+----*----+----*----+----*----+----* 1300
msj01112 1214 ..GTACTAAAAGTTAACTTGGGCGGTAT...................AGG 1242
||||||| ||||| || | || |
ha00609 1244 GAATACTAAATGTTAAGTTCTAGGCAATTATACGGGGACTCAGAAGGACC 1293
1301 ----+----*----+----*----+----*----+----*----+----* 1350
msj01112 1243 TGGCCGCTGCCCTCAGTGACATTTGACATTAAAAGGACGGGTTTG.CCTT 1291
||||||||||| ||| |||| ||||| |||| || ||| ||||
ha00609 1294 TGGCCGCTGCCTTCA.......TTGAGTTTAAAGGGACAGGATTGCCCTT 1336
1351 ----+----*----+----*----+----*----+----*----+----* 1400
msj01112 1292 CCCTCGAGTCAGTGCTGGACGAGTTAATAGAGACACTGACTGGAAATTGG 1341
|| || || ||| | || ||
ha00609 1337 CCGTCAAGAAAGT...........................ATGTAAGTGT 1359
1401 ----+----*----+----*----+----*----+----*----+----* 1450
msj01112 1342 TGTATTTTGAGAATTATAGAAATGATATAGCCAGAACCAGGAATAAGTTA 1391
|| | | |||| |||| | | ||| |||
ha00609 1360 TGGACTGCACAAATT.....AATGTTTTTCCCACAAC............. 1391
1451 ----+----*----+----*----+----*----+----*----+----* 1500
msj01112 1392 AGGCCTGCCTTTTTATCTTGACTTTGGATACTGCGTTACAGTAGATTGGT 1441
| ||||||||| | | | | | |
ha00609 1392 ................CGAGACTTTGGAGATTAAG........AACTTAT 1417
1501 ----+----*----+----*----+----*----+----*----+----* 1550
msj01112 1442 TTCAACATTTTTGCATTATTTTTATAACAAAGCTTGTGTATTTATCAAAG 1491
|| | |||| | |||| |||| || | ||
ha00609 1418 TTGAGGATTTAAGAATTAGGGAAATAA............TTTGGTGGAAA 1455
1551 ----+----*----+----*----+----*----+----*----+----* 1600
msj01112 1492 CGGGGAGGGCGGGGGAAAATTATATCTACCTGTGATTTGCAAGTATTGTA 1541
| |||| | | | ||| |
ha00609 1456 CCGGGAATGAGTTCTATTCTTAAA.......................... 1479
1601 ----+----*----+----*----+----*----+----*----+----* 1650
msj01112 1542 AATGGATGCAGGTACCTGGTGTTGCTTTTAACTTTTACTGTCGGTAGAGG 1591
| || |||| ||||| ||| ||
ha00609 1480 ................CAGCCTTTTTTTTTCTTTTTAATGTTGG...... 1507
1651 ----+----*----+----*----+----*----+----*----+----* 1700
msj01112 1592 TTGCATGTGAAGCCAGTAACCTGGGCACCAATATGGAGTGTGCTTGAGAA 1641
|||| | | | | |||
ha00609 1508 ..............................ATATACGGCGAGGTAGAG.. 1525
1701 ----+----*----+----*----+----*----+----*----+----* 1750
msj01112 1642 AAACAAAGTAGTTACAGTGGTTCTAAAAAAGACCCCTTGTTTTAGGAAAA 1691
ha00609 1526 .................................................. 1526
1751 ----+----*----+----*----+----*----+----*----+----* 1800
msj01112 1692 CTTTGGCCCTAACTATAATATTAAAAGTATAGTGCTTTTTGGTGTTGGTT 1741
|||||| || | | | | | | | || | || ||
ha00609 1526 ..TTGGCCATATTTCAGAGACTTAGATTGACGTATATGTTTCTG...... 1567
1801 ----+----*----+----*----+----*----+----*----+----* 1850
msj01112 1742 CAGGTGGTGCATTTGGCCAATGGATTGCTTTAAGTCCAGAAATAGTTGTC 1791
|
ha00609 1568 .................................................C 1568
1851 ----+----*----+----*----+----*----+----*----+----* 1900
msj01112 1792 ATTTTGTTTGTAACCGGTGGCTTTTGTTTAATTGGCTTGGGTTTTAGATA 1841
||| | ||| ||| | ||||| || | || || |
ha00609 1569 ATTATTTTTACAACAAG.....TTTGTGTATCAGAGCGGGAGTTCGGGGG 1613
1901 ----+----*----+----*----+----*----+----*----+----* 1950
msj01112 1842 TTGTCAAAATATCTGGCATTCACTATGGAACCAAGGCTGCCCTGGAACTC 1891
| || | | | || |
ha00609 1614 AGGGAAAGAAAACAAACAGT.............................. 1633
1951 ----+----*----+----*----+----*----+----*----+----* 2000
msj01112 1892 AGGGCCAAGTGCTGAGATTATAATCGAGCAGCAGATTTCATGTTTATTTC 1941
| ||| | ||| | ||
ha00609 1634 ...........TTCAGAATTGAATAGGCAAG................... 1653
2001 ----+----*----+----*----+----*----+----*----+----* 2050
msj01112 1942 TGTCCTAGATGTTTTTCCCTGTTTCATTGTCTTATTTTGTTCTTAATAAA 1991
| | ||| ||| | |||||||
ha00609 1654 .......................TGACTGTTTTAAAGATTAAGTAATAAA 1680
2051 ----+----*----+---- 2069
msj01112 1992 CTTATCTTTGCATAATTAG 2010
| |||| |
ha00609 1681 GATGTCTTATCTAGTG... 1696