Comparison of KIAA cDNA sequences between mouse and human (FLJ00067)
<<Original sequence data>>
mouse mFLJ00067 (msh44296) length: 3275 bp, CDS: 2 - 2677
human (as00067) length: 4394 bp, CDS: 1210 - 2934
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 672 - 1230 328 44 11.8
CDS: 1231 - 2935 1362 292 17.7
3'UTR: 2936 - 4429 569 671 54.1
amino acid
CDS: 1231 - 2935 449 119 21.0
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
msh44296 1 .................................................. 1
as00067 1 CCCACGCGTCCGGCCCCAGGCTCTTTGCATAATCCTGTGGCTTCGCTGTC 50
51 ----+----*----+----*----+----*----+----*----+----* 100
msh44296 1 .................................................. 1
as00067 51 TTCACCCAGCACCAGCGGACAGGGAAGGGCAGAGAAGGCCACCATGGCGA 100
101 ----+----*----+----*----+----*----+----*----+----* 150
msh44296 1 .................................................. 1
as00067 101 CACTCCTCTCCCATCCGCAGCAGCGCCCTCCCTTCTTGCGCCAGGCCATC 150
151 ----+----*----+----*----+----*----+----*----+----* 200
msh44296 1 .................................................. 1
as00067 151 AAGATAAGGCGCCGCAGAGTCAGAGATCTACAGGATCCCCCGCCCCAAAT 200
201 ----+----*----+----*----+----*----+----*----+----* 250
msh44296 1 .................................................. 1
as00067 201 GGCCCCGGAGATCCAGCCTCCATCCCACCACTTCTCCCCCGAGCAGCGGG 250
251 ----+----*----+----*----+----*----+----*----+----* 300
msh44296 1 .................................................. 1
as00067 251 CCCTGCTCTACGAGGACGCACTCTACACTGTCTTGCACCGCCTGGGTCAT 300
301 ----+----*----+----*----+----*----+----*----+----* 350
msh44296 1 .................................................. 1
as00067 301 CCTGAGCCCAACCATGTGACGGAGGCCTCTGAGCTGCTGCGATACCTGCA 350
351 ----+----*----+----*----+----*----+----*----+----* 400
msh44296 1 .................................................. 1
as00067 351 GGAGGCCTTCCACGTGGAGCCCGAGGAGCACCAGCAGACACTGCAGCGGG 400
401 ----+----*----+----*----+----*----+----*----+----* 450
msh44296 1 .................................................. 1
as00067 401 TCAGGGAGCTTGAGAAGCCAATATTTTGTCTGAAGGCAACAGTGAAACAG 450
451 ----+----*----+----*----+----*----+----*----+----* 500
msh44296 1 .................................................. 1
as00067 451 GCCAAGGGCATTCTGGGCAAAGATGTCAGTGGGTTCAGCGACCCCTACTG 500
501 ----+----*----+----*----+----*----+----*----+----* 550
msh44296 1 .................................................. 1
as00067 501 CCTGCTGGGCATTGAGCAGGGGGTAGGTGTGCCAGGGGGCAGCCCCGGGT 550
551 ----+----*----+----*----+----*----+----*----+----* 600
msh44296 1 .................................................. 1
as00067 551 CCCGGCATCGGCAGAAGGCTGTGGTGAGGCACACCATCCCCGAGGAGGAG 600
601 ----+----*----+----*----+----*----+----*----+----* 650
msh44296 1 .................................................. 1
as00067 601 ACCCACCGCACGCAGGTCATCACCCAGACACTCAACCCCGTCTGGGACGA 650
651 ----+----*----+----*----+----*----+----*----+----* 700
msh44296 1 .....................GGACATAGCCAATGCAAGCTTTCACCTGG 29
|||||| ||||||| |||||||| ||||
as00067 651 GACCTTCATCCTGGAGTTTGAGGACATCACCAATGCGAGCTTTCATCTGG 700
701 ----+----*----+----*----+----*----+----*----+----* 750
msh44296 30 ACATGTGGGACCTGGACACTGTGGAGTCTGTCAGGCAGAAGCTCGGGGAG 79
|||||||||||||||||||||||||||||||| | |||||||| ||||||
as00067 701 ACATGTGGGACCTGGACACTGTGGAGTCTGTCCGACAGAAGCTTGGGGAG 750
751 ----+----*----+----*----+----*----+----*----+----* 800
msh44296 80 CTCACGGACCTGCACGGGCTCCGGAGGATCTTTAAAGAAGCTCGGAAGGA 129
|||||||| ||||| ||||| || |||||||||||||| || ||||||||
as00067 751 CTCACGGATCTGCATGGGCTTCGCAGGATCTTTAAAGAGGCCCGGAAGGA 800
801 ----+----*----+----*----+----*----+----*----+----* 850
msh44296 130 TAAAGGCCAGGACGACTTTCTGGGGAATGTGGTTCTGAGGTTGCAGGACC 179
|||||||||||||||||||||||||| |||||||||||| |||||||||
as00067 801 CAAAGGCCAGGACGACTTTCTGGGGAACGTGGTTCTGAGGCTGCAGGACC 850
851 ----+----*----+----*----+----*----+----*----+----* 900
msh44296 180 TGCGCTGCCGAGAGGACCAGTGGTTCCCGCTAGAGCCCTGCACAGAGACC 229
|||||||||||||||||||||||| ||| || || ||| |||| ||||||
as00067 851 TGCGCTGCCGAGAGGACCAGTGGTACCCCCTGGAACCCCGCACTGAGACC 900
901 ----+----*----+----*----+----*----+----*----+----* 950
msh44296 230 TACCCAGACCGCGGCCAGTGCCACCTTCAGTTCCAGTTCATTCACAAGAG 279
||||||||||| |||||||||||||| |||||||| |||| || ||| |
as00067 901 TACCCAGACCGAGGCCAGTGCCACCTCCAGTTCCAACTCATCCATAAGCG 950
951 ----+----*----+----*----+----*----+----*----+----* 1000
msh44296 280 .................................................. 280
as00067 951 GGTAGGTCGGGTACTGGGCCAGTGGCCATGCCCAGCTCTTGCGGCGGTCT 1000
1001 ----+----*----+----*----+----*----+----*----+----* 1050
msh44296 280 .................................................. 280
as00067 1001 GCTGGGTTGCGGGGCTGGCTGCACCCAGTGTGAGGCCCTGTCTGCTCACA 1050
1051 ----+----*----+----*----+----*----+----*----+----* 1100
msh44296 280 ..............GAGAGCCACGGCGGCCAGCCGCTCTCAGCCCAGCTA 315
||||||||| ||||||||||||| ||||| |||||
as00067 1051 GAGGCCTCATTGCAGAGAGCCACTTCGGCCAGCCGCTCGCAGCCGAGCTA 1100
1101 ----+----*----+----*----+----*----+----*----+----* 1150
msh44296 316 CACTGTACACTTTCACCTACTGCAGCAGCTGGTGTCCCATGAAGTCACAC 365
||| || ||| | ||||| ||||||||||| |||||||| || ||||| |
as00067 1101 CACCGTGCACCTCCACCTCCTGCAGCAGCTTGTGTCCCACGAGGTCACCC 1150
1151 ----+----*----+----*----+----*----+----*----+----* 1200
msh44296 366 AGCAC............................................. 370
|||||
as00067 1151 AGCACGAGGTATTGCCCTCCTGGGGCTGGGCGTAGCCGGGGCTGCCCTTC 1200
1201 ----+----*----+----*----+----*----+----*----+----* 1250
Q A G S T S W
msh44296 371 ..............................CAGGCCGGCAGTACCTCCTG 390
||||| || || ||||||||
as00067 1201 AGGTCCTGACACTCCTCCACCTGCTCCCCTCAGGCGGGAAGCACCTCCTG 1250
H S S T C S P Q A G S T S W
1251 ----+----*----+----*----+----*----+----*----+----* 1300
D A S L S P Q A V T I L F L H A T
msh44296 391 GGACGCATCACTGAGTCCCCAGGCTGTCACCATCCTCTTTCTCCACGCCA 440
||||| || |||||||||||||||| |||| |||||||||| |||||||
as00067 1251 GGACGGGTCGCTGAGTCCCCAGGCTGCCACCGTCCTCTTTCTGCACGCCA 1300
D G S L S P Q A A T V L F L H A T
1301 ----+----*----+----*----+----*----+----*----+----* 1350
Q K D L S D F H Q S M A Q W L A
msh44296 441 CTCAGAAGGACCTGTCGGACTTCCACCAGTCCATGGCGCAGTGGTTGGCC 490
| ||||||||||| || ||||||||||||||||||||||||||| |||||
as00067 1301 CACAGAAGGACCTATCCGACTTCCACCAGTCCATGGCGCAGTGGCTGGCC 1350
Q K D L S D F H Q S M A Q W L A
1351 ----+----*----+----*----+----*----+----*----+----* 1400
Y S R L Y Q S L E F P S S C L L H
msh44296 491 TACAGCCGCCTCTACCAGAGCCTGGAGTTCCCCAGCAGCTGCCTCCTGCA 540
||||||||||||||||||||||||||||||||||||||||||||||||||
as00067 1351 TACAGCCGCCTCTACCAGAGCCTGGAGTTCCCCAGCAGCTGCCTCCTGCA 1400
Y S R L Y Q S L E F P S S C L L H
1401 ----+----*----+----*----+----*----+----*----+----* 1450
P I T S I E Y Q W I Q G R L K A E
msh44296 541 CCCCATCACCAGCATAGAGTACCAGTGGATCCAGGGCCGACTCAAAGCAG 590
||||||||||||||| |||||||||||||||||||| || ||||| ||||
as00067 1401 CCCCATCACCAGCATCGAGTACCAGTGGATCCAGGGTCGGCTCAAGGCAG 1450
P I T S I E Y Q W I Q G R L K A E
1451 ----+----*----+----*----+----*----+----*----+----* 1500
Q R E E L A T S F T S L L A Y G
msh44296 591 AACAGCGGGAGGAGCTGGCCACCTCCTTCACATCCCTGTTGGCCTATGGC 640
|||||| ||||||||||||| |||| |||| |||||| || |||| |||
as00067 1451 AACAGCAGGAGGAGCTGGCCGCCTCATTCAGCTCCCTGCTGACCTACGGC 1500
Q Q E E L A A S F S S L L T Y G
1501 ----+----*----+----*----+----*----+----*----+----* 1550
L S L I R K F R S V F P L S V S D
msh44296 641 CTCTCCCTTATCCGGAAGTTCCGCTCCGTCTTTCCCCTGTCTGTCTCTGA 690
|||||||| ||||||| ||||||||| ||||| ||||| |||||||| ||
as00067 1501 CTCTCCCTCATCCGGAGGTTCCGCTCTGTCTTCCCCCTCTCTGTCTCGGA 1550
L S L I R R F R S V F P L S V S D
1551 ----+----*----+----*----+----*----+----*----+----* 1600
S P S R L Q S L L R V L V Q M C K
msh44296 691 CTCCCCATCCAGGCTGCAGTCCCTCCTCAGAGTCTTGGTCCAGATGTGCA 740
||||||| || |||||||||| || ||||| ||| |||| ||||||||||
as00067 1551 CTCCCCAGCCCGGCTGCAGTCTCTTCTCAGGGTCCTGGTACAGATGTGCA 1600
S P A R L Q S L L R V L V Q M C K
1601 ----+----*----+----*----+----*----+----*----+----* 1650
M K A F G E L C P D S A P L S Q
msh44296 741 AAATGAAGGCCTTTGGAGAACTGTGCCCAGACAGCGCTCCACTGTCCCAG 790
| |||||||||||||||||||||||||| ||| ||| ||| || |||||
as00067 1601 AGATGAAGGCCTTTGGAGAACTGTGCCCCAACACCGCCCCATTGCCCCAG 1650
M K A F G E L C P N T A P L P Q
1651 ----+----*----+----*----+----*----+----*----+----* 1700
L V S E A L R M G T V E W F H L M
msh44296 791 CTGGTTTCTGAAGCTCTGCGGATGGGCACAGTTGAGTGGTTTCACCTGAT 840
||||| |||| || |||| || ||||| ||| ||||| |||||||
as00067 1651 CTGGTGACTGAGGCCCTGCAGACTGGCACCACTGAATGGTTCCACCTGAA 1700
L V T E A L Q T G T T E W F H L K
1701 ----+----*----+----*----+----*----+----*----+----* 1750
Q Q H H Q P - G I L E A G K A
msh44296 841 GCAGCAACACCATCAGCCCAT......GGGCATCCTGGAGGCTGGCAAGG 884
|||||| |||||||| ||||| |||||||| |||||| |||||||
as00067 1701 GCAGCAGCACCATCAACCCATGGTGCAGGGCATCCCGGAGGCAGGCAAGG 1750
Q Q H H Q P M V Q G I P E A G K A
1751 ----+----*----+----*----+----*----+----*----+----* 1800
L L N L V Q D V M G D L Y Q C R
msh44296 885 CCTTGCTAAATCTGGTACAGGACGTCATGGGTGATCTGTACCAGTGTCGT 934
||||||| ||||||||||| ||||| || || ||| ||||||| |
as00067 1751 CCTTGCTGGGCCTGGTACAGGATGTCATTGGCGACCTGCACCAGTGCCAG 1800
L L G L V Q D V I G D L H Q C Q
1801 ----+----*----+----*----+----*----+----*----+----* 1850
R T W N K I F H N V L K I D L F S
msh44296 935 CGCACATGGAACAAGATTTTCCACAATGTCCTCAAGATAGACCTGTTCTC 984
||||||||| ||||||| ||||||||| ||||||||| |||| |||||
as00067 1801 CGCACATGGGACAAGATCTTCCACAATACCCTCAAGATCCACCTCTTCTC 1850
R T W D K I F H N T L K I H L F S
1851 ----+----*----+----*----+----*----+----*----+----* 1900
M A F L E L Q W L V A K R V Q D H
msh44296 985 CATGGCCTTCCTGGAACTGCAGTGGCTGGTGGCCAAGAGGGTACAGGACC 1034
|||||| |||| ||| ||||||||||||||||||||| |||| |||||||
as00067 1851 CATGGCTTTCCGGGAGCTGCAGTGGCTGGTGGCCAAGCGGGTGCAGGACC 1900
M A F R E L Q W L V A K R V Q D H
1901 ----+----*----+----*----+----*----+----*----+----* 1950
T V A A G N L V S P D I G E S L
msh44296 1035 ACACGGTGGCGGCTGGCAACCTTGTTTCTCCAGATATTGGAGAGAGTCTG 1084
||||| || | || | | || || ||||| || || |||||||||
as00067 1901 ACACGACGGTTGTGGGTGATGTAGTGTCCCCAGAGATGGGCGAGAGTCTG 1950
T T V V G D V V S P E M G E S L
1951 ----+----*----+----*----+----*----+----*----+----* 2000
F Q L Y V S L K E L C Q L G P V P
msh44296 1085 TTTCAGCTGTATGTCAGCCTGAAGGAGCTCTGCCAGCTGGGCCCTGTCCC 1134
|| ||||| || ||||||| |||||||||||||||||| || | |
as00067 1951 TTCCAGCTCTACATCAGCCTCAAGGAGCTCTGCCAGCTGCGCATGAGCTC 2000
F Q L Y I S L K E L C Q L R M S S
2001 ----+----*----+----*----+----*----+----*----+----* 2050
S D S R E V L A L D G F H R W F Q
msh44296 1135 CTCAGACAGCCGTGAAGTCCTGGCCCTGGATGGCTTCCACCGCTGGTTTC 1184
|||||| || || |||||||||||||||| |||||||||||||| |
as00067 2001 CTCAGAGAGGGATGGAGTCCTGGCCCTGGATAATTTCCACCGCTGGTTCC 2050
S E R D G V L A L D N F H R W F Q
2051 ----+----*----+----*----+----*----+----*----+----* 2100
P A I P S W L Q K T Y S V A L E
msh44296 1185 AGCCAGCCATCCCTTCCTGGCTGCAGAAGACTTACAGTGTCGCTCTGGAG 1234
|||| |||||||| ||||||||||||||||| |||| | || |||| |
as00067 2051 AGCCGGCCATCCCCTCCTGGCTGCAGAAGACGTACAACGAGGCCCTGGCG 2100
P A I P S W L Q K T Y N E A L A
2101 ----+----*----+----*----+----*----+----*----+----* 2150
R V Q R A V Q M D T L V P L G E L
msh44296 1235 CGGGTGCAGCGTGCCGTACAGATGGACACGCTGGTACCCCTGGGCGAACT 1284
||||||||||| || || |||||||| |||||| |||||||| |||||
as00067 2101 CGGGTGCAGCGCGCTGTGCAGATGGATGAGCTGGTGCCCCTGGGTGAACT 2150
R V Q R A V Q M D E L V P L G E L
2151 ----+----*----+----*----+----*----+----*----+----* 2200
T K H S T S A V D L S T C F A Q I
msh44296 1285 GACCAAGCACAGCACTTCTGCCGTGGATCTGTCTACCTGCTTTGCCCAAA 1334
||||||||||||||| || || |||||||| || |||||||||||||| |
as00067 2151 GACCAAGCACAGCACATCAGCGGTGGATCTATCCACCTGCTTTGCCCAGA 2200
T K H S T S A V D L S T C F A Q I
2201 ----+----*----+----*----+----*----+----*----+----* 2250
S H T A R Q L D W P D P E E A F
msh44296 1335 TTAGCCACACTGCCCGGCAGCTGGACTGGCCAGACCCAGAGGAGGCCTTC 1384
| ||||||||||||||||||||||||||||||||||||||||||||||||
as00067 2201 TCAGCCACACTGCCCGGCAGCTGGACTGGCCAGACCCAGAGGAGGCCTTC 2250
S H T A R Q L D W P D P E E A F
2251 ----+----*----+----*----+----*----+----*----+----* 2300
M I T V K F V E D T C R L A L V Y
msh44296 1385 ATGATCACTGTCAAGTTCGTGGAGGACACGTGCCGGCTGGCCCTGGTCTA 1434
||||| || |||||||| ||||||||||| || || ||||||||||| ||
as00067 2251 ATGATTACCGTCAAGTTTGTGGAGGACACCTGTCGCCTGGCCCTGGTGTA 2300
M I T V K F V E D T C R L A L V Y
2301 ----+----*----+----*----+----*----+----*----+----* 2350
C S L I K A R A R E L S A V Q K D
msh44296 1435 CTGTAGCCTTATAAAGGCCCGGGCCCGAGAGCTGTCTGCAGTTCAGAAGG 1484
||| ||||||||||||||||||||||| ||||| ||| ||| |||||||
as00067 2301 CTGCAGCCTTATAAAGGCCCGGGCCCGCGAGCTCTCTTCAGGCCAGAAGG 2350
C S L I K A R A R E L S S G Q K D
2351 ----+----*----+----*----+----*----+----*----+----* 2400
Q S Q A A D M L C V V V N N M E
msh44296 1485 ACCAGAGCCAGGCAGCTGACATGCTGTGTGTGGTGGTAAATAACATGGAG 1534
|||| |||||||||| ||||||||||||||||||| ||| ||||||||
as00067 2351 ACCAAGGCCAGGCAGCCAACATGCTGTGTGTGGTGGTGAATGACATGGAG 2400
Q G Q A A N M L C V V V N D M E
2401 ----+----*----+----*----+----*----+----*----+----* 2450
Q L R L I I D K L P T Q L A W E A
msh44296 1535 CAACTACGGTTGATCATCGACAAGCTACCCACTCAGCTGGCATGGGAGGC 1584
|| || ||| || | |||| |||| | ||| | |||||||||||||||||
as00067 2401 CAGCTGCGGCTGGTGATCGGCAAGTTGCCCGCCCAGCTGGCATGGGAGGC 2450
Q L R L V I G K L P A Q L A W E A
2451 ----+----*----+----*----+----*----+----*----+----* 2500
L E Q R V G A V L E E G Q L Q N T
msh44296 1585 ATTGGAGCAGCGGGTCGGGGCCGTGTTGGAGGAGGGGCAGCTGCAGAACA 1634
||||||||||||| ||||||||| ||||| ||||||||||||||||||
as00067 2451 CCTGGAGCAGCGGGTAGGGGCCGTGCTGGAGCAGGGGCAGCTGCAGAACA 2500
L E Q R V G A V L E Q G Q L Q N T
2501 ----+----*----+----*----+----*----+----*----+----* 2550
L H A Q L Q G A L A G L G H E I
msh44296 1635 CGTTACATGCTCAGCTGCAGGGCGCCTTGGCGGGGCTGGGCCATGAGATC 1684
|| | ||||| ||||||||| |||| |||| ||||||||||||||||||
as00067 2501 CGCTGCATGCCCAGCTGCAGAGCGCGCTGGCCGGGCTGGGCCATGAGATC 2550
L H A Q L Q S A L A G L G H E I
2551 ----+----*----+----*----+----*----+----*----+----* 2600
R T G V R T L A E Q L E V G I A T
msh44296 1685 CGTACTGGTGTCCGTACCCTGGCAGAGCAGTTGGAGGTGGGCATTGCCAC 1734
|| ||||| ||||| |||||||| |||||||||||||||||||| ||||
as00067 2551 CGCACTGGCGTCCGCACCCTGGCCGAGCAGTTGGAGGTGGGCATCGCCAA 2600
R T G V R T L A E Q L E V G I A K
2601 ----+----*----+----*----+----*----+----*----+----* 2650
H I Q K L I G V K E S V L P E D A
msh44296 1735 ACACATCCAGAAACTCATTGGCGTCAAGGAGTCTGTTCTGCCCGAGGATG 1784
|||||||||||||| | ||||||| ||||||||| ||||| |||||||
as00067 2601 GCACATCCAGAAACTGGTGGGCGTCAGGGAGTCTGTCCTGCCTGAGGATG 2650
H I Q K L V G V R E S V L P E D A
2651 ----+----*----+----*----+----*----+----*----+----* 2700
I L P L M K F L E V K L C Y M N
msh44296 1785 CCATTCTGCCCCTGATGAAATTCTTGGAGGTGAAGCTTTGCTACATGAAC 1834
||||||||||||||||||| ||| |||||||| |||||||||||||||||
as00067 2651 CCATTCTGCCCCTGATGAAGTTCCTGGAGGTGGAGCTTTGCTACATGAAC 2700
I L P L M K F L E V E L C Y M N
2701 ----+----*----+----*----+----*----+----*----+----* 2750
T N L V Q E N F S S L D S V V
msh44296 1835 ACCAACCTGGTCCAGGAGAACTTCAGCAGCCTT....CTGACTCTGTTGT 1880
|||||| |||| ||||||||||||||||| | | | | ||| |
as00067 2701 ACCAACTTGGTGCAGGAGAACTTCAGCAGGTCTGTAGCAGCCCCTGCCCT 2750
T N L V Q E N F S R S V A A P A L
2751 ----+----*----+----*----+----*----+----*----+----* 2800
D P H A Y -
msh44296 1881 GGACCCACACGCTTACT................................. 1897
|| | | | ||| ||
as00067 2751 GGGCGCGCTCGCCACCTCCCCCTCTCCTCCCACGGCCCCTCCTTCCTGGG 2800
G A L A T S P S P P T A P P S W A
2801 ----+----*----+----*----+----*----+----*----+----* 2850
V L V E V A S S Q R S S S
msh44296 1898 ...........GTGCTGGTGGAGGTGGCTTCTTCCCAGCGTAGCTCGTCC 1936
|| ||| || || || | | | || || |
as00067 2801 CCCCAGCATCCGTTCTGAGGGGTGTAGCAGCCCCTGCCCTGGGCGCGCTC 2850
P A S V L R G V A A P A L G A L
2851 ----+----*----+----*----+----*----+----*----+----* 2900
L A S G R L K V A L R T W R S A S
msh44296 1937 CTGGCTTCTGGCAGGCTGAAGGTCGCCCTTCAGAACCTGGAGGTCTGCTT 1986
| || | | |||| || ||||| || || |
as00067 2851 GCCACCTCCCCCTCTCCTCCCACGGCCCCTC.TTTCCTGGGCCTCAGCAT 2899
A T S P S P P T A P L S W A S A S
2901 ----+----*----+----*----+----*----+----*----+----* 2950
T L R A G L P P E A
msh44296 1987 CCACGCTGAGGGCT.GTGGTCTGCCACCAGAGGCCCTGCACACAGACACC 2035
|| ||||||| | | ||| | | | | | | |
as00067 2900 CCGTTCTGAGGGGTGGAGGTGAATCCCTTTGGTGACCTCCCTTATGGGTG 2949
V L R G G G E S L W *
2951 ----+----*----+----*----+----*----+----*----+----* 3000
msh44296 2036 TTCCAGGCTCTGC.AGAACGACCTGGAGCTGCAGGCGGCCTCCAGCCGGG 2084
|||||||||| | | ||| || | || || | | |
as00067 2950 CAACAGGCTCTGCTAAGGCTCGCTGCAGGGACGGGGAGCTTGCCACTTCT 2999
3001 ----+----*----+----*----+----*----+----*----+----* 3050
msh44296 2085 AGCTTATCCAGAAGTACTTCTGCAGCCGAATCCAGCAGCAGGCCGAAACC 2134
||| | | || |||| | | | || |
as00067 3000 CAGGCCTCCCCATTTCCTGCTGC......CTAGCTCTGAGTGCTTTGAGT 3043
3051 ----+----*----+----*----+----*----+----*----+----* 3100
msh44296 2135 ACTTCTGAGAGGCTGGGCGCAGTCACCGTCAAGGTCTCCTACCGCGCCTC 2184
|||| | ||| || || || | | |||| | |||
as00067 3044 TCTTC......CTTAGGCTGAGCCAAAATCTACCTGTCCT..TTCTCCTT 3085
3101 ----+----*----+----*----+----*----+----*----+----* 3150
msh44296 2185 TGAGCAGAGGCTTCGCGTGGAACTGCTCAGTGCTTCTAGCCTGCTGCCCC 2234
| | |||| | | | | || | ||||||| | |
as00067 3086 TAGTCCCAGGCCTGTCTT........CAGGGCCTCCCTGCCTGCTCCTCT 3127
3151 ----+----*----+----*----+----*----+----*----+----* 3200
msh44296 2235 TGGACTCCAATGGTTCCAGTGACCCCTTTGTTCAGTTGACACTGGAACCC 2284
| | | | | ||| |||| | || | | | |
as00067 3128 GCCCCCATTAGGTTACAGGTGGTCCCTGCCCACGGTGCAGGGAGAACTTC 3177
3201 ----+----*----+----*----+----*----+----*----+----* 3250
msh44296 2285 AGACATGAATTCCCTGAAGTGGCCCCCCGGGAGACCCAGAAGCACAAGAA 2334
| | | | | || | ||| | | || | | || |
as00067 3178 TAGCTAGGGTGTCTTATAGCAGGGACCCAGCATGCCAGGCAACAGGCGGT 3227
3251 ----+----*----+----*----+----*----+----*----+----* 3300
msh44296 2335 GGAACTTCACCCACTCTTTGATGAGACCTTTGAATTCCTGGTGCCTGCTG 2384
|| | | || | | || | || ||| | | |
as00067 3228 GG.AGTCCAGCACATGGGCTCTGGACCACCTGGGTTCAGACTCCGGCTTC 3276
3301 ----+----*----+----*----+----*----+----*----+----* 3350
msh44296 2385 AGCCTTGCCAAAAAGCCTGGGCATGCCTCCTGCTCACTGTGCTGGACCAC 2434
| | ||| | ||||| || | | || | |||| |
as00067 3277 ATCACTGCTTAGCAGCCTTGG......GCAAGTTCCCGGTGCAGATGAGA 3320
3351 ----+----*----+----*----+----*----+----*----+----* 3400
msh44296 2435 GACAGACTGGGAGCAGACGACCTGGAGGGAGAGGCCTTCTTACCGCTCTG 2484
| |||| | | || | | | | | ||| |
as00067 3321 GTAGTTCTGGCTTCTGTTGAGGATTA.AATGGGTCATGTGAGGTGCTGAG 3369
3401 ----+----*----+----*----+----*----+----*----+----* 3450
msh44296 2485 CAGGGTACCTGGACTGACGGACTGTGCAGAGCC.....GGGCGAAGCACC 2529
| ||| | | || | | | || ||| | | | | | ||
as00067 3370 CGTGGTGTCAGTACAAAGGAAGTGGTCAGTGACTATTAGCGGTAGTGACG 3419
3451 ----+----*----+----*----+----*----+----*----+----* 3500
msh44296 2530 TCAAATGCGCCTGCCTCTCACATACC........................ 2555
| | | || | ||| | ||
as00067 3420 ATGATGATGACAGCGCCCCACCTCCCTGTGGAATCTGGGCCCTGAAGAGG 3469
3501 ----+----*----+----*----+----*----+----*----+----* 3550
msh44296 2556 .....................CTGCCCCCAACGGGGACCCAATTCTGCGG 2584
| || || | | | || | | |
as00067 3470 CCGCAGCCCTCCTAGAGTTCTGTTCCACCCCCAGAGGTATAAGCCAGGGC 3519
3551 ----+----*----+----*----+----*----+----*----+----* 3600
msh44296 2585 CTGTTGGAGAGCCGGAAGGGGGATCGCGAGGCCCAGGCCTTTGTAAAGCT 2634
| | |||| | | || | ||| | | | || |
as00067 3520 CCCTCGGAGCCCGGCCGTTTTTATTTCTTAAACCATGTATATATATTTTT 3569
3601 ----+----*----+----*----+----*----+----*----+----* 3650
msh44296 2635 GAGGAGGCAGAGAGCCAAGCAGGC.....CTCCCAACATGCCCCGTGACA 2679
| |||| | | || | |||| || |
as00067 3570 TATTTTTTTGAGACGGAGTCTCGCTCTGTCGCCCAGGCTGGAGTGCAGTG 3619
3651 ----+----*----+----*----+----*----+----*----+----* 3700
msh44296 2680 GGGCGGTGGCTGCTGAAGCAAACGTTTGGGGTCTTTCTTGTCACAGGGAA 2729
| ||| | | ||| | ||| | | | | | || || ||
as00067 3620 GCGCGATCTCAGCTCACTGCAACCTCCG....CCTCCGGGTTCAAGTGAT 3665
3701 ----+----*----+----*----+----*----+----*----+----* 3750
msh44296 2730 GCCCTTCATC......CTGTGTAACACAGGGAGAACCAGCAGGGGGGGA. 2772
|||| | || ||| ||||| | | ||| | |
as00067 3666 TCCCTGCCTCAGCCTGCTGAGTAACTGGGACTACAGGTGCATGCCATTAT 3715
3751 ----+----*----+----*----+----*----+----*----+----* 3800
msh44296 2773 GGGGGCCTCAGAGGTCTTGACAGAACAGCTCTTGGTGATGACCGTGGCCA 2822
| | || | | | || ||| ||||| | | |||||
as00067 3716 GCCTGGCTAATTGTTTTTTTGAGATGGAGTCTTGCTCTGTTGCCAGGCCA 3765
3801 ----+----*----+----*----+----*----+----*----+----* 3850
msh44296 2823 G.GTTTTATCCTTTCTTGTGCCCTGGCTGTGCTCTCTGCCATATTGTAGC 2871
| || | | | | || ||| ||| ||| | | |
as00067 3766 GAGTGCAGTGGTGCAATCTTGGCTCACTGCAACCTCCGCCTCCTGGGTTC 3815
3851 ----+----*----+----*----+----*----+----*----+----* 3900
msh44296 2872 ACAGAGGAACATCTCCTGTCTCTGCTCCC..................... 2900
| | ||||||| ||| || ||
as00067 3816 ....AAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGC 3861
3901 ----+----*----+----*----+----*----+----*----+----* 3950
msh44296 2901 .TGCACCCCCGTCCCCCCAGAAACGCTGCTTTGGTAGGATAG........ 2941
| || | | || || || || ||| | ||
as00067 3862 ACGTGCCACAATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTT 3911
3951 ----+----*----+----*----+----*----+----*----+----* 4000
msh44296 2942 ....CATAGCGTCTAGGGCCATCTGCCTTTTGGAACTGCCAGTTCCAGCT 2987
||| | | ||| ||| | | || || | |||| |
as00067 3912 TCACCATGTTGGCCAGGATGGTCTCAATCTCTTGACCTCCTGATCCACCC 3961
4001 ----+----*----+----*----+----*----+----*----+----* 4050
msh44296 2988 ACTGGGGTGGGGCCAGACCACTGGGATCAGAGCTGTG.GCCACAACTTCA 3036
|| | ||| | ||||||| | || ||| ||||| || |
as00067 3962 AC.CTCGACCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCACGCCC 4010
4051 ----+----*----+----*----+----*----+----*----+----* 4100
msh44296 3037 GAGAGAGAGGACTGTCAAA............................... 3055
| | | | |||
as00067 4011 GGCCTGGTTCTGTCTTAAATCATGGTTGTCACTGGGGGCCTGGCCTCCTC 4060
4101 ----+----*----+----*----+----*----+----*----+----* 4150
msh44296 3056 ....................GGCATCCTGGTGCAGGACGGGGGTGG..CC 3083
|||| | | | | | |||| || |
as00067 4061 CCTGTCTCCAGCCTTGTTTGTGCATTCCGTTAGTGTGCTGGGGAGGGTTC 4110
4151 ----+----*----+----*----+----*----+----*----+----* 4200
msh44296 3084 ATCACTGAGG........................................ 3093
|||||||||
as00067 4111 CTCACTGAGGTTGAGAGGTGTGTTGGATAGGACTGATCCCACCTGCCCCT 4160
4201 ----+----*----+----*----+----*----+----*----+----* 4250
msh44296 3094 .....................................GAGGTGGGAAGAA 3106
| ||||||| |
as00067 4161 TGCTGGTCCTGTACCCACCCTCTCCCCAGCCTCACCTGGGGTGGGAGGCG 4210
4251 ----+----*----+----*----+----*----+----*----+----* 4300
msh44296 3107 GAGACTCTGGCT..CTGAGGTGAGAGCTGGCAGGAAGCTGGGTAGGCACA 3154
||| || | | || ||||||| | |||||||
as00067 4211 GAGGGGGAGGTTGGGGGTGGGAGGAGCTGGGGTGGGGCTGGGTCACTGAG 4260
4301 ----+----*----+----*----+----*----+----*----+----* 4350
msh44296 3155 GATGGACAGCCGCAGAAAGGGAGTTTGGCT.......GTCTACAGAATAG 3197
| | | | || | |||| | | || | |
as00067 4261 GCCGCCCCTTTCTCAAGAGCGTCTTTGCTTCCTCCTCCGCCACCGCCCTG 4310
4351 ----+----*----+----*----+----*----+----*----+----* 4400
msh44296 3198 CCTTCCTCCCTCAG.ATAGCACCTGCCACCTAGAAATGTTCTCAGAGAAA 3246
|| | || || | || | || ||| | | | || |
as00067 4311 CCGTGCTGTGTCCGCATCCCTCCGGCCCCGCCCCAGCCTCCTGACCCTGC 4360
4401 ----+----*----+----*----+----*----+-- 4437
msh44296 3247 ATAAAAATAAAACATTATCCACTGCCCTC........ 3275
| | ||| | ||| | ||
as00067 4361 TCTGGACCCACACACT...CACAGTGCTGGTGGAGGC 4394