Comparison of KIAA cDNA sequences between mouse and human (KIAA0538)

<<Original sequence data>>

mouse  mKIAA0538 (msh37311)     length:   2788 bp, CDS:     2 -  2482
human  hg03944mrp2  length:   5579 bp, CDS:     2 -  2452


<<Aligned sequence information>>

----------------------------------------------------------
            region      #match  #mismatch  %diff
----------------------------------------------------------
DNA

5'UTR:     21 -    21       1        0      0.0
  CDS:     22 -  2485    2059      391      16.0
3'UTR:   2486 -  5098     166      146      46.8

amino acid

  CDS:     22 -  2485     701      116      14.2
----------------------------------------------------------


<<Alignment>>

                1 ----+----*----+----*----+----*----+----*----+----* 50
                                       D  P  *  V  R  T  P  P  R  Q 
msh37311        1 CCCCTCCTTACCCCGAGAGGGGACCCATGAGTCCGAACCCCTCCCCGCCA 50
                                      ||||||  | ||| |    || ||  ||| 
hg03944mrp2     1 ....................GGACCCCGGTGTCTGGCTTCCCCCGAGCCG 30
                                       D  P  G  V  W  L  P  P  S  R 

               51 ----+----*----+----*----+----*----+----*----+----* 100
                   A               P  A  M  A  K  R  S  S  L  S  I  
msh37311       51 GGCCTCCACGTCGCCGACCCGCAATGGCCAAGCGCAGTTCGCTGTCCATC 100
                  || |             ||||| |||||||||||||| ||||||| ||||
hg03944mrp2    31 GGAC.............CCCGCGATGGCCAAGCGCAGCTCGCTGTACATC 67
                   D               P  A  M  A  K  R  S  S  L  Y  I  

              101 ----+----*----+----*----+----*----+----*----+----* 150
                  R  I  V  E  G  K  N  L  P  A  K  D  I  T  G  S  S 
msh37311      101 CGAATCGTAGAAGGGAAAAATCTGCCCGCCAAGGACATCACGGGCAGCAG 150
                  || ||||| || ||||| || || ||||||||||||||||| ||||||||
hg03944mrp2    68 CGCATCGTGGAGGGGAAGAACCTTCCCGCCAAGGACATCACTGGCAGCAG 117
                  R  I  V  E  G  K  N  L  P  A  K  D  I  T  G  S  S 

              151 ----+----*----+----*----+----*----+----*----+----* 200
                   D  P  Y  C  I  V  K  V  D  N  E  P  I  I  R  T  A
msh37311      151 CGACCCCTACTGCATCGTGAAGGTGGACAATGAACCCATCATCAGGACAG 200
                  ||||||||||||||||||||||||||||||||| ||||||||||||||||
hg03944mrp2   118 CGACCCCTACTGCATCGTGAAGGTGGACAATGAGCCCATCATCAGGACAG 167
                   D  P  Y  C  I  V  K  V  D  N  E  P  I  I  R  T  A

              201 ----+----*----+----*----+----*----+----*----+----* 250
                    T  V  W  K  T  L  C  P  F  W  G  E  D  Y  Q  V  
msh37311      201 CCACTGTGTGGAAGACCCTGTGCCCCTTCTGGGGTGAAGACTACCAAGTA 250
                  |||| |||||||||||||||||||||||||||||||| || |||||||| 
hg03944mrp2   168 CCACAGTGTGGAAGACCCTGTGCCCCTTCTGGGGTGAGGAGTACCAAGTG 217
                    T  V  W  K  T  L  C  P  F  W  G  E  E  Y  Q  V  

              251 ----+----*----+----*----+----*----+----*----+----* 300
                  H  L  P  P  T  F  H  T  V  A  F  Y  V  M  D  E  D 
msh37311      251 CACTTGCCCCCCACGTTCCACACGGTGGCCTTCTATGTCATGGATGAGGA 300
                  ||| |||| ||||| |||||| | ||||| ||||||||||||||||||||
hg03944mrp2   218 CACCTGCCGCCCACCTTCCACGCTGTGGCTTTCTATGTCATGGATGAGGA 267
                  H  L  P  P  T  F  H  A  V  A  F  Y  V  M  D  E  D 

              301 ----+----*----+----*----+----*----+----*----+----* 350
                   A  L  S  R  D  D  V  I  G  K  V  C  L  T  R  D  A
msh37311      301 TGCCCTTAGCCGGGACGATGTGATCGGGAAGGTCTGCCTCACGAGGGACG 350
                  |||||| ||||||||||| || ||||| ||||||||||| || |||||| 
hg03944mrp2   268 TGCCCTCAGCCGGGACGACGTTATCGGAAAGGTCTGCCTTACAAGGGACA 317
                   A  L  S  R  D  D  V  I  G  K  V  C  L  T  R  D  T

              351 ----+----*----+----*----+----*----+----*----+----* 400
                    L  A  S  H  P  K  G  F  S  G  W  T  H  L  V  E  
msh37311      351 CGCTAGCCTCTCACCCAAAGGGATTCAGTGGATGGACCCACCTGGTGGAG 400
                  |  ||||||||||||| ||||| ||||| || ||| ||||||||  ||||
hg03944mrp2   318 CCATAGCCTCTCACCCTAAGGGTTTCAGCGGGTGGGCCCACCTGACGGAG 367
                    I  A  S  H  P  K  G  F  S  G  W  A  H  L  T  E  

              401 ----+----*----+----*----+----*----+----*----+----* 450
                  V  D  P  N  E  E  V  Q  G  E  I  H  L  R  L  E  V 
msh37311      401 GTGGACCCGAACGAGGAGGTGCAGGGTGAGATCCACCTGCGCCTGGAGGT 450
                  || |||||  |||||||||||||||| |||||||||||||| ||||| ||
hg03944mrp2   368 GTCGACCCCGACGAGGAGGTGCAGGGCGAGATCCACCTGCGGCTGGAAGT 417
                  V  D  P  D  E  E  V  Q  G  E  I  H  L  R  L  E  V 

              451 ----+----*----+----*----+----*----+----*----+----* 500
                   V  P  G  V  H  A  S  R  L  R  C  A  V  L  E  A  R
msh37311      451 GGTGCCAGGGGTCCATGCCAGCCGGCTGCGCTGCGCGGTGCTTGAGGCGA 500
                  |  |||||||| ||  ||| ||||||| |||||| | ||||| ||||| |
hg03944mrp2   418 GTGGCCAGGGGCCCGGGCCTGCCGGCTACGCTGCTCTGTGCTGGAGGCCA 467
                   W  P  G  A  R  A  C  R  L  R  C  S  V  L  E  A  R

              501 ----+----*----+----*----+----*----+----*----+----* 550
                    D  L  A  P  K  D  R  N  G  A  S  D  P  F  V  R  
msh37311      501 GGGACTTAGCACCAAAAGATCGGAATGGCGCATCTGACCCTTTTGTCCGA 550
                  ||||  | || ||||| || || |||||| |||||||||| || ||||||
hg03944mrp2   468 GGGATCTGGCCCCAAAGGACCGCAATGGCACATCTGACCCCTTCGTCCGA 517
                    D  L  A  P  K  D  R  N  G  T  S  D  P  F  V  R  

              551 ----+----*----+----*----+----*----+----*----+----* 600
                  V  H  Y  N  G  R  T  Q  E  T  S  V  V  K  K  S  C 
msh37311      551 GTGCACTACAATGGCCGGACCCAGGAGACCTCGGTGGTGAAGAAATCCTG 600
                  |||| |||||| |||||||| | |||||||||| | |||||||| || ||
hg03944mrp2   518 GTGCGCTACAAGGGCCGGACACGGGAGACCTCGATCGTGAAGAAGTCATG 567
                  V  R  Y  K  G  R  T  R  E  T  S  I  V  K  K  S  C 

              601 ----+----*----+----*----+----*----+----*----+----* 650
                   Y  P  R  W  N  E  T  F  D  F  E  L  E  K  G  A  S
msh37311      601 CTACCCACGCTGGAATGAGACATTTGATTTTGAGCTGGAAAAAGGAGCCT 650
                  ||||||||||||||||||||| ||||| ||||||||| |  | || ||| 
hg03944mrp2   568 CTACCCACGCTGGAATGAGACGTTTGAATTTGAGCTGCAGGAGGGGGCCA 617
                   Y  P  R  W  N  E  T  F  E  F  E  L  Q  E  G  A  M

              651 ----+----*----+----*----+----*----+----*----+----* 700
                    E  A  L  L  V  E  A  W  D  W  D  L  V  S  Q  N  
msh37311      651 CAGAAGCACTGCTGGTGGAGGCCTGGGACTGGGATCTTGTTAGCCAGAAT 700
                    || ||||||   |||||||||||||||||||| ||||| ||||  || 
hg03944mrp2   618 TGGAGGCACTGTGCGTGGAGGCCTGGGACTGGGACCTTGTCAGCCGAAAC 667
                    E  A  L  C  V  E  A  W  D  W  D  L  V  S  R  N  

              701 ----+----*----+----*----+----*----+----*----+----* 750
                  D  F  L  G  K  V  V  V  N  V  Q  R  L  C  S  A  Q 
msh37311      701 GACTTTCTAGGCAAAGTGGTGGTCAATGTCCAGAGACTTTGTTCAGCCCA 750
                  ||||| || |||||||||||| |  |||||||||||||  |    |  ||
hg03944mrp2   668 GACTTCCTGGGCAAAGTGGTGATTGATGTCCAGAGACTGCGGGTGGTGCA 717
                  D  F  L  G  K  V  V  I  D  V  Q  R  L  R  V  V  Q 

              751 ----+----*----+----*----+----*----+----*----+----* 800
                   Q  E  E  G  W  F  R  L  Q  P  D  Q  S  K  S     R
msh37311      751 GCAGGAAGAGGGCTGGTTCCGGCTGCAGCCTGACCAGTCCAAAAGC...C 797
                  |||||| ||||||||||||||||||||||| ||||||||||| |||   |
hg03944mrp2   718 GCAGGAGGAGGGCTGGTTCCGGCTGCAGCCCGACCAGTCCAAGAGCCGGC 767
                   Q  E  E  G  W  F  R  L  Q  P  D  Q  S  K  S  R  R

              801 ----+----*----+----*----+----*----+----*----+----* 850
                    Q  G  K  G  N  L  G  S  L  Q  L  E  V  R  L  R  
msh37311      798 GTCAAGGCAAGGGCAACCTGGGCTCCTTGCAGTTGGAAGTGCGGCTGCGG 847
                  | || | | ||||||||||||||||||||||| |||| ||||||||||||
hg03944mrp2   768 GGCATGACGAGGGCAACCTGGGCTCCTTGCAGCTGGAGGTGCGGCTGCGG 817
                    H  D  E  G  N  L  G  S  L  Q  L  E  V  R  L  R  

              851 ----+----*----+----*----+----*----+----*----+----* 900
                  D  E  T  V  L  P  S  V  C  Y  Q  P  L  V  Q  L  L 
msh37311      848 GACGAGACAGTGCTGCCGTCCGTCTGCTACCAGCCCCTGGTACAACTGTT 897
                  |||||||| |||||||| |||  || ||||||||| ||||| || ||| |
hg03944mrp2   818 GACGAGACGGTGCTGCCCTCCAGCTACTACCAGCCACTGGTGCACCTGCT 867
                  D  E  T  V  L  P  S  S  Y  Y  Q  P  L  V  H  L  L 

              901 ----+----*----+----*----+----*----+----*----+----* 950
                   C  Q  E  V  K  L  G  T  Q  G  P  G  R  L  I  P  V
msh37311      898 GTGCCAGGAGGTGAAGCTGGGCACTCAGGGCCCAGGACGGCTGATTCCTG 947
                  |||||| ||||| ||||||||||  ||||||||||| | |||||| ||  
hg03944mrp2   868 GTGCCACGAGGTCAAGCTGGGCATGCAGGGCCCAGGGCAGCTGATCCCAC 917
                   C  H  E  V  K  L  G  M  Q  G  P  G  Q  L  I  P  L

              951 ----+----*----+----*----+----*----+----*----+----* 1000
                    I  E  E  T  T  S  A  E  C  R  Q  E  V  A  T  T  
msh37311      948 TCATTGAGGAGACAACTAGTGCCGAGTGTCGCCAGGAAGTGGCCACCACC 997
                  |||| ||||||||||| ||  |||||||||||||||| |||||||| | |
hg03944mrp2   918 TCATCGAGGAGACAACCAGCACCGAGTGTCGCCAGGACGTGGCCACGAAC 967
                    I  E  E  T  T  S  T  E  C  R  Q  D  V  A  T  N  

             1001 ----+----*----+----*----+----*----+----*----+----* 1050
                  L  L  K  L  F  L  G  Q  G  L  A  K  D  F  L  D  L 
msh37311      998 CTGCTCAAACTCTTCCTGGGGCAGGGGCTGGCCAAGGACTTTCTGGATCT 1047
                  |||||||| |||||||||||||||||||||||||||||||| ||||| ||
hg03944mrp2   968 CTGCTCAAGCTCTTCCTGGGGCAGGGGCTGGCCAAGGACTTCCTGGACCT 1017
                  L  L  K  L  F  L  G  Q  G  L  A  K  D  F  L  D  L 

             1051 ----+----*----+----*----+----*----+----*----+----* 1100
                   L  F  Q  L  E  L  G  R  T  S  E  A  N  T  L  F  R
msh37311     1048 GCTTTTTCAGCTGGAGCTGGGCCGCACCAGTGAAGCCAACACCCTCTTCC 1097
                  ||| || |||||||||||| | |||||||||||  |||||||||| ||||
hg03944mrp2  1018 GCTCTTCCAGCTGGAGCTGAGTCGCACCAGTGAGACCAACACCCTGTTCC 1067
                   L  F  Q  L  E  L  S  R  T  S  E  T  N  T  L  F  R

             1101 ----+----*----+----*----+----*----+----*----+----* 1150
                    S  N  S  L  A  S  K  S  M  E  S  F  L  K  V  A  
msh37311     1098 GGAGCAATTCTCTGGCCTCAAAGTCCATGGAGTCTTTCCTGAAGGTGGCA 1147
                  ||||||| ||||||||||||||||||||||||||||| ||||||||||| 
hg03944mrp2  1068 GGAGCAACTCTCTGGCCTCAAAGTCCATGGAGTCTTTTCTGAAGGTGGCC 1117
                    S  N  S  L  A  S  K  S  M  E  S  F  L  K  V  A  

             1151 ----+----*----+----*----+----*----+----*----+----* 1200
                  G  M  R  Y  L  H  G  I  L  G  P  I  I  D  R  V  F 
msh37311     1148 GGGATGCGCTATCTGCATGGCATCCTGGGCCCCATCATTGACAGAGTGTT 1197
                  |||||||  || ||||| ||| ||||||||||||||||  |||  |||||
hg03944mrp2  1118 GGGATGCAGTACCTGCACGGCGTCCTGGGCCCCATCATCAACAAGGTGTT 1167
                  G  M  Q  Y  L  H  G  V  L  G  P  I  I  N  K  V  F 

             1201 ----+----*----+----*----+----*----+----*----+----* 1250
                   E  E  K  K  Y  V  E  L  D  P  S  K  V  E  V  K  D
msh37311     1198 CGAGGAGAAGAAGTACGTGGAGCTGGACCCCAGCAAAGTGGAAGTTAAGG 1247
                   |||||||||||||||||||||||||||||||||||||||||||||||||
hg03944mrp2  1168 TGAGGAGAAGAAGTACGTGGAGCTGGACCCCAGCAAAGTGGAAGTTAAGG 1217
                   E  E  K  K  Y  V  E  L  D  P  S  K  V  E  V  K  D

             1251 ----+----*----+----*----+----*----+----*----+----* 1300
                    V  G  C  S  G  L  H  R  P  Q  T  E  A  E  V  L  
msh37311     1248 ATGTAGGGTGCTCTGGGCTGCACCGCCCACAGACCGAAGCTGAAGTGTTA 1297
                  ||||||||||||| |||||||||||||| |||||||| || || ||| | 
hg03944mrp2  1218 ATGTAGGGTGCTCCGGGCTGCACCGCCCGCAGACCGAGGCCGAGGTGCTG 1267
                    V  G  C  S  G  L  H  R  P  Q  T  E  A  E  V  L  

             1301 ----+----*----+----*----+----*----+----*----+----* 1350
                  E  Q  S  A  Q  T  L  R  A  H  L  V  A  L  L  S  A 
msh37311     1298 GAGCAGAGTGCACAGACGCTGCGTGCCCACTTAGTGGCGCTGCTGAGCGC 1347
                  |||||||| || ||||||||||| |||||| | | ||| |||||||||||
hg03944mrp2  1268 GAGCAGAGCGCGCAGACGCTGCGCGCCCACCTGGGGGCCCTGCTGAGCGC 1317
                  E  Q  S  A  Q  T  L  R  A  H  L  G  A  L  L  S  A 

             1351 ----+----*----+----*----+----*----+----*----+----* 1400
                   I  C  R  S  V  R  T  C  P  A  I  I  R  A  T  F  R
msh37311     1348 CATATGCCGCTCGGTTCGCACGTGCCCAGCCATCATCCGCGCCACATTCC 1397
                    |  |||||||||||||| ||||||| ||| |  | |||||||| ||||
hg03944mrp2  1318 GCTCAGCCGCTCGGTTCGCGCGTGCCCCGCCGTGGTGCGCGCCACCTTCC 1367
                   L  S  R  S  V  R  A  C  P  A  V  V  R  A  T  F  R

             1401 ----+----*----+----*----+----*----+----*----+----* 1450
                    Q  L  F  R  R  V  R  E  R  F  P  N  A  Q  H  Q  
msh37311     1398 GGCAGCTGTTCAGGCGCGTGCGCGAGCGCTTCCCGAACGCCCAGCACCAG 1447
                  | ||||| ||| ||||||||||||||||||||||   |||||||||| ||
hg03944mrp2  1368 GCCAGCTCTTCCGGCGCGTGCGCGAGCGCTTCCCCGGCGCCCAGCACGAG 1417
                    Q  L  F  R  R  V  R  E  R  F  P  G  A  Q  H  E  

             1451 ----+----*----+----*----+----*----+----*----+----* 1500
                  N  V  P  F  I  A  V  T  S  F  L  C  L  R  F  F  S 
msh37311     1448 AACGTACCATTCATCGCGGTCACCAGCTTCCTGTGCCTGCGCTTCTTCTC 1497
                  || ||||| |||||||| ||||||||||||||||||||||||||||||||
hg03944mrp2  1418 AATGTACCGTTCATCGCCGTCACCAGCTTCCTGTGCCTGCGCTTCTTCTC 1467
                  N  V  P  F  I  A  V  T  S  F  L  C  L  R  F  F  S 

             1501 ----+----*----+----*----+----*----+----*----+----* 1550
                   P  A  I  L  S  P  K  L  F  H  L  R  E  R  H  A  D
msh37311     1498 TCCCGCCATCCTGTCGCCCAAGCTCTTCCACCTGCGAGAGCGGCATGCAG 1547
                  |||||||||| ||||||||||||||||||||||||| ||||| || || |
hg03944mrp2  1468 TCCCGCCATCATGTCGCCCAAGCTCTTCCACCTGCGGGAGCGCCACGCGG 1517
                   P  A  I  M  S  P  K  L  F  H  L  R  E  R  H  A  D

             1551 ----+----*----+----*----+----*----+----*----+----* 1600
                    A  R  T  S  R  T  L  L  L  L  A  K  A  V  Q  N  
msh37311     1548 ATGCCCGCACCAGCCGCACGCTGCTTCTGCTGGCCAAGGCGGTCCAGAAC 1597
                  | ||||||||||||||||| ||||| ||| |||||||||| |||||||||
hg03944mrp2  1518 ACGCCCGCACCAGCCGCACCCTGCTCCTGTTGGCCAAGGCAGTCCAGAAC 1567
                    A  R  T  S  R  T  L  L  L  L  A  K  A  V  Q  N  

             1601 ----+----*----+----*----+----*----+----*----+----* 1650
                  I  G  N  M  D  T  P  V  S  R  A  K  E  S  W  M  E 
msh37311     1598 ATAGGCAATATGGACACACCGGTCTCTAGGGCCAAAGAGTCGTGGATGGA 1647
                   | ||||| |||||||| ||||  || |||||||| ||| | ||||||||
hg03944mrp2  1568 GTGGGCAACATGGACACGCCGGCTTCCAGGGCCAAGGAGGCTTGGATGGA 1617
                  V  G  N  M  D  T  P  A  S  R  A  K  E  A  W  M  E 

             1651 ----+----*----+----*----+----*----+----*----+----* 1700
                   P  L  Q  P  T  V  R  Q  G  V  A  Q  L  K  D  F  I
msh37311     1648 ACCACTCCAGCCTACCGTGCGCCAGGGCGTGGCGCAGCTGAAGGACTTCA 1697
                   || || ||||| |||||||||||||||||||||||||||||||||||||
hg03944mrp2  1618 GCCGCTGCAGCCCACCGTGCGCCAGGGCGTGGCGCAGCTGAAGGACTTCA 1667
                   P  L  Q  P  T  V  R  Q  G  V  A  Q  L  K  D  F  I

             1701 ----+----*----+----*----+----*----+----*----+----* 1750
                    M  K  L  V  D  I  E  E  K  E  E  L  D  L  Q  R  
msh37311     1698 TTATGAAGCTTGTGGACATAGAAGAAAAGGAAGAGCTGGACCTGCAGCGG 1747
                  | |  ||||| |||||||| || || ||||| ||||||||||||||||||
hg03944mrp2  1668 TCACCAAGCTCGTGGACATCGAGGAGAAGGACGAGCTGGACCTGCAGCGG 1717
                    T  K  L  V  D  I  E  E  K  D  E  L  D  L  Q  R  

             1751 ----+----*----+----*----+----*----+----*----+----* 1800
                  A  L  N  S  Q  A  P  P  V  K  E  G  P  L  F  I  H 
msh37311     1748 GCTTTGAACTCACAGGCACCACCTGTGAAGGAGGGACCATTGTTCATCCA 1797
                   |  |||  |  ||||| ||||||||||||||||| ||| | ||||||||
hg03944mrp2  1718 ACGCTGAGTTTGCAGGCGCCACCTGTGAAGGAGGGGCCACTCTTCATCCA 1767
                  T  L  S  L  Q  A  P  P  V  K  E  G  P  L  F  I  H 

             1801 ----+----*----+----*----+----*----+----*----+----* 1850
                   R  T  K  G  K  G  P  L  A  S  S  S  F  K  K  L  Y
msh37311     1798 CAGGACCAAAGGCAAAGGCCCTCTTGCATCCTCCTCGTTCAAGAAACTCT 1847
                  ||||||||| ||||| ||||| ||    |||||||| |||||||| ||||
hg03944mrp2  1768 CAGGACCAAGGGCAAGGGCCCCCTCATGTCCTCCTCCTTCAAGAAGCTCT 1817
                   R  T  K  G  K  G  P  L  M  S  S  S  F  K  K  L  Y

             1851 ----+----*----+----*----+----*----+----*----+----* 1900
                    F  S  L  T  T  E  A  L  S  F  A  K  T  S  S  S  
msh37311     1848 ACTTCTCCCTTACCACTGAAGCCCTCAGCTTCGCCAAGACGTCCAGCTCC 1897
                  |||||||||| || || || |||||||||||||| |||| | ||||||||
hg03944mrp2  1818 ACTTCTCCCTCACTACCGAGGCCCTCAGCTTCGCGAAGATGCCCAGCTCC 1867
                    F  S  L  T  T  E  A  L  S  F  A  K  M  P  S  S  

             1901 ----+----*----+----*----+----*----+----*----+----* 1950
                  K  K  S  T  F  I  K  L  A  S  I  R  A  A  E  K  V 
msh37311     1898 AAGAAAAGCACCTTCATCAAGCTGGCCAGCATCCGGGCTGCGGAGAAGGT 1947
                  ||||||||| || |||||||| | |||| ||||||||| ||||| |||||
hg03944mrp2  1868 AAGAAAAGCGCCCTCATCAAGTTAGCCAACATCCGGGCAGCGGAAAAGGT 1917
                  K  K  S  A  L  I  K  L  A  N  I  R  A  A  E  K  V 

             1951 ----+----*----+----*----+----*----+----*----+----* 2000
                   E  E  K  S  F  G  S  S  H  I  M  Q  V  I  Y  A  D
msh37311     1948 GGAGGAAAAGAGCTTCGGCAGCTCCCACATCATGCAGGTCATCTATGCAG 1997
                   |||||||||||||| ||| |||| ||| ||||||||||||||||  | |
hg03944mrp2  1918 TGAGGAAAAGAGCTTTGGCGGCTCGCACGTCATGCAGGTCATCTACACGG 1967
                   E  E  K  S  F  G  G  S  H  V  M  Q  V  I  Y  T  D

             2001 ----+----*----+----*----+----*----+----*----+----* 2050
                    D  V  G  R  A  Q  T  V  Y  L  Q  C  K  C  V  N  
msh37311     1998 ATGATGTTGGCCGTGCCCAGACTGTCTACCTGCAGTGCAAGTGTGTGAAC 2047
                  | || |  ||| |  ||||||||| |||||||||||||||||||||||| 
hg03944mrp2  1968 ACGACGCCGGCAGGCCCCAGACTGCCTACCTGCAGTGCAAGTGTGTGAAT 2017
                    D  A  G  R  P  Q  T  A  Y  L  Q  C  K  C  V  N  

             2051 ----+----*----+----*----+----*----+----*----+----* 2100
                  E  L  N  Q  W  L  S  A  L  R  K  A  S  T  N  N  R 
msh37311     2048 GAGTTGAACCAGTGGCTGTCTGCATTGCGCAAAGCGAGCACCAACAACAG 2097
                  ||| | |||||||||||||||||  |||| || | ||||| |||||||| 
hg03944mrp2  2018 GAGCTTAACCAGTGGCTGTCTGCGCTGCGGAAGGTGAGCATCAACAACAC 2067
                  E  L  N  Q  W  L  S  A  L  R  K  V  S  I  N  N  T 

             2101 ----+----*----+----*----+----*----+----*----+----* 2150
                   G  L  L  R  S  Y  H  P  G  I  F  R  G  D  K  W  S
msh37311     2098 GGGCCTCCTACGGTCATACCATCCTGGCATCTTCCGTGGGGACAAGTGGA 2147
                   || || ||  | || ||||| |||||| |||||||||||||||||||||
hg03944mrp2  2068 CGGACTGCTGGGCTCCTACCACCCTGGCGTCTTCCGTGGGGACAAGTGGA 2117
                   G  L  L  G  S  Y  H  P  G  V  F  R  G  D  K  W  S

             2151 ----+----*----+----*----+----*----+----*----+----* 2200
                    C  C  H  Q  K  D  K  T  D  Q  G  C  D  K  T  H  
msh37311     2148 GCTGCTGTCACCAGAAGGACAAGACAGATCAGGGATGTGACAAGACCCAC 2197
                  ||||||| ||||| || || ||||||| |||||| || || |||||||  
hg03944mrp2  2118 GCTGCTGCCACCAAAAAGAGAAGACAGGTCAGGGCTGCGATAAGACCCGG 2167
                    C  C  H  Q  K  E  K  T  G  Q  G  C  D  K  T  R  

             2201 ----+----*----+----*----+----*----+----*----+----* 2250
                  S  R  V  T  L  Q  E  W  N  D  P  L  D  H  D  L  E 
msh37311     2198 TCTCGGGTGACCCTGCAGGAATGGAATGACCCACTGGATCATGACCTTGA 2247
                  || ||||||||||||||||| ||||||||||| || || |||||||||||
hg03944mrp2  2168 TCACGGGTGACCCTGCAGGAGTGGAATGACCCTCTTGACCATGACCTTGA 2217
                  S  R  V  T  L  Q  E  W  N  D  P  L  D  H  D  L  E 

             2251 ----+----*----+----*----+----*----+----*----+----* 2300
                   A  Q  L  I  Y  R  H  L  L  G  V  E  A  A  L  R  E
msh37311     2248 GGCTCAGCTCATCTACAGGCACCTGCTAGGCGTGGAGGCTGCTCTGCGGG 2297
                  ||| |||||||||||| |||||||||| |||||||||||    ||| |||
hg03944mrp2  2218 GGCCCAGCTCATCTACCGGCACCTGCTGGGCGTGGAGGCCATGCTGTGGG 2267
                   A  Q  L  I  Y  R  H  L  L  G  V  E  A  M  L  W  E

             2301 ----+----*----+----*----+----*----+----*----+----* 2350
                    R  Y  Q  L  L  R  G  A  T  E  A  G  V  S  P  T  
msh37311     2298 AAAGATACCAGCTCCTGCGTGGGGCGACAGAAGCCGGTGTCTCACCCACG 2347
                  | ||  ||| |   ||| | ||||  ||||| || ||       ||||||
hg03944mrp2  2268 AGAGGCACCGGGAGCTGAGCGGGGGCACAGAGGCAGGCACGGTGCCCACG 2317
                    R  H  R  E  L  S  G  G  T  E  A  G  T  V  P  T  

             2351 ----+----*----+----*----+----*----+----*----+----* 2400
                  G  C  D  G  A  P  E  D  S  L  A  Q  L  L  R  V  L 
msh37311     2348 GGCTGTGATGGAGCTCCCGAGGACTCGCTGGCCCAGCTGCTTCGTGTGCT 2397
                   ||  ||    ||  |||||||||||  |||||| |||||| || |||||
hg03944mrp2  2318 AGCCCTGGCAAAGTCCCCGAGGACTCATTGGCCCGGCTGCTCCGGGTGCT 2367
                  S  P  G  K  V  P  E  D  S  L  A  R  L  L  R  V  L 

             2401 ----+----*----+----*----+----*----+----*----+----* 2450
                   Q  D  L  R  E  A  H  G  S  S  L  A  S  P  A  A  R
msh37311     2398 GCAAGACCTTCGAGAAGCCCACGGCTCCAGTCTGGCCAGCCCAGCAGCCA 2447
                  ||| ||||| || || |||||  ||||||| | |||| || |  || || 
hg03944mrp2  2368 GCAGGACCTCCGCGAGGCCCATAGCTCCAGCCCGGCCGGCTCCCCACCCT 2417
                   Q  D  L  R  E  A  H  S  S  S  P  A  G  S  P  P  S

             2451 ----+----*----+----*----+----*----+----*----+----* 2500
                    E  P  H  H  L  L  E  L  Q  T  *                 
msh37311     2448 GAGAGCCCCATCACCTTCTAGAGCTACAGACGTGAGGTGTCCGTGAGGTG 2497
                   ||||||| |   ||| || ||||| |||||||||||    |   | |  
hg03944mrp2  2418 CAGAGCCCAACTGCCTCCTGGAGCTGCAGACGTGAGGCCCGCCCTACGCT 2467
                    E  P  N  C  L  L  E  L  Q  T  *                 

             2501 ----+----*----+----*----+----*----+----*----+----* 2550
msh37311     2498 TCCATCG....AGCCCCTGTTAGGTGTTTGCAGATCC............. 2530
                   || | |      ||||||  | | | | | ||  ||             
hg03944mrp2  2468 CCCCTTGCTGAGTCCCCTGCCAAGCGCTCGGAGCCCCCCCAGGACACTCT 2517

             2551 ----+----*----+----*----+----*----+----*----+----* 2600
msh37311     2531 .................................................. 2531
                                                                    
hg03944mrp2  2518 GCACCCCCTCACCCCGGTCCTCCTCATTAGGGTGCAGGGCCTAGGTCTCT 2567

             2601 ----+----*----+----*----+----*----+----*----+----* 2650
msh37311     2531 .................................................. 2531
                                                                    
hg03944mrp2  2568 TCCAGGTGGGGGAGGGGGGAGAGTCAGGAATAAGGGGATCCCCAGAAGTG 2617

             2651 ----+----*----+----*----+----*----+----*----+----* 2700
msh37311     2531 .................................................. 2531
                                                                    
hg03944mrp2  2618 CAGAGCTGAGCAGGCTTGGGCCTGTCATGGCTGGCCGGAAGTGTCCCCAG 2667

             2701 ----+----*----+----*----+----*----+----*----+----* 2750
msh37311     2531 .................................................. 2531
                                                                    
hg03944mrp2  2668 CTCCCTACAGACGCTGTAGCCATCACTGCCTCTCCAGGGACCCTCCTCTC 2717

             2751 ----+----*----+----*----+----*----+----*----+----* 2800
msh37311     2531 .................................................. 2531
                                                                    
hg03944mrp2  2718 CTGCCCAGGACAGACCCAGCCAGAACCACTGCTAGGATGGGCCGCACCCA 2767

             2801 ----+----*----+----*----+----*----+----*----+----* 2850
msh37311     2531 .................................................. 2531
                                                                    
hg03944mrp2  2768 GGGGTCTGGCCTCCAGGGACCTAGAGAATGGGAGGGAGAACGGGGCCCCA 2817

             2851 ----+----*----+----*----+----*----+----*----+----* 2900
msh37311     2531 .................................................. 2531
                                                                    
hg03944mrp2  2818 GGAGACCCGGCCGCCACCCCACCCGCTACCCTTGGGTGCCACAGGGCTGT 2867

             2901 ----+----*----+----*----+----*----+----*----+----* 2950
msh37311     2531 .................................................. 2531
                                                                    
hg03944mrp2  2868 GCTGTTGCCAACAGTAAACCTGCTCTTACTGTCCAGGCTCTGGGGTCTTG 2917

             2951 ----+----*----+----*----+----*----+----*----+----* 3000
msh37311     2531 .................................................. 2531
                                                                    
hg03944mrp2  2918 TGATGAGGGTCTGGGGAGAAAGTGGGCCCGGGGGGACCCCGGAGGCTGTC 2967

             3001 ----+----*----+----*----+----*----+----*----+----* 3050
msh37311     2531 ..TAGACATGCTCAGGATCCTTGTCCCAGTCAACTGTTCTGGGGAGGGCT 2578
                    | ||  |||  | |||     |  |||| |   | |||||| |   ||
hg03944mrp2  2968 GGTGGATGTGCCGATGATGGGGCTGACAGT.ATGGGCTCTGGGCATCCCT 3016

             3051 ----+----*----+----*----+----*----+----*----+----* 3100
msh37311     2579 GTGACCCAGCATAGTCTTCTCCATGTCTGCGAGGGACAACCGT....... 2621
                  ||  |||  | |    | | ||   ||| |  ||| |    ||       
hg03944mrp2  3017 GTTCCCCCCCCTTTCTTCCCCCCACTCTTCTGGGGTCGGGGGTTCCTTTC 3066

             3101 ----+----*----+----*----+----*----+----*----+----* 3150
msh37311     2622 .................................................. 2622
                                                                    
hg03944mrp2  3067 CCTTCCCAGTTGCTGTCCCTGGGTCCCCTCTTTCATGTCCCACAGGCCAC 3116

             3151 ----+----*----+----*----+----*----+----*----+----* 3200
msh37311     2622 .................................................. 2622
                                                                    
hg03944mrp2  3117 AGAGCCCAGTGTGTCCAACCAGCTGTTCTCTCCTCAAAGCAGCCCCCAAG 3166

             3201 ----+----*----+----*----+----*----+----*----+----* 3250
msh37311     2622 .................................................. 2622
                                                                    
hg03944mrp2  3167 CAAGTCCCTTCTCTAGGGTGTCCCTGAGGACAGCACAGAGGCGGGACTCA 3216

             3251 ----+----*----+----*----+----*----+----*----+----* 3300
msh37311     2622 .................................................. 2622
                                                                    
hg03944mrp2  3217 GAGACCCCATTCCTCTTCACGCAGCCCTTACCCCAAGCCCTCTAGCTGTG 3266

             3301 ----+----*----+----*----+----*----+----*----+----* 3350
msh37311     2622 .................................................. 2622
                                                                    
hg03944mrp2  3267 TGGCTGGCAGTGTTGGCCACGTAGGGGCTCCCATCCCCCCACCATTGTGT 3316

             3351 ----+----*----+----*----+----*----+----*----+----* 3400
msh37311     2622 .................................................. 2622
                                                                    
hg03944mrp2  3317 CACATGGGCTGCCAGGCTCAGCTCCCAGCTGCGTCCACAGTGACCTGGAT 3366

             3401 ----+----*----+----*----+----*----+----*----+----* 3450
msh37311     2622 .................................................. 2622
                                                                    
hg03944mrp2  3367 CAGGGTGGGGACAAGGACTGGACCCTCCTTCTCCAGAAGGCCTTCAGCTC 3416

             3451 ----+----*----+----*----+----*----+----*----+----* 3500
msh37311     2622 ...............GACACCTGCTTCCTTGGGAGAACCAA......... 2647
                                 | ||||| |||||      || || |         
hg03944mrp2  3417 TTGCCTTGCCATGCAGTCACCTCCTTCCCCCTCTGACCCCAGATCCCAAA 3466

             3501 ----+----*----+----*----+----*----+----*----+----* 3550
msh37311     2648 .................................................. 2648
                                                                    
hg03944mrp2  3467 GGTGCACCGTTGCCCCAGCCCCTTTCTGGCCCCATGGGGTTTCTCTGATG 3516

             3551 ----+----*----+----*----+----*----+----*----+----* 3600
msh37311     2648 .................................................. 2648
                                                                    
hg03944mrp2  3517 CCTTCATCATAGAGGCCCGGGGCTGGTCCGATGGTTGGCAAAACTTGACT 3566

             3601 ----+----*----+----*----+----*----+----*----+----* 3650
msh37311     2648 .................................................. 2648
                                                                    
hg03944mrp2  3567 CCGGCCCAGTCCCCACTCTTGGGGACTTAGAACCCCTGCTGTCCTGGGAT 3616

             3651 ----+----*----+----*----+----*----+----*----+----* 3700
msh37311     2648 .................................................. 2648
                                                                    
hg03944mrp2  3617 CTGGCCTGCCTTTCTTTGGTCAGTCCCTGTGGTCCCCCACCAGCTCCCCC 3666

             3701 ----+----*----+----*----+----*----+----*----+----* 3750
msh37311     2648 .................................................. 2648
                                                                    
hg03944mrp2  3667 TCCCATAGGGCTGCCCACCAAGCCCTGCCCCCAGCCCAAGAGGAGCCCCC 3716

             3751 ----+----*----+----*----+----*----+----*----+----* 3800
msh37311     2648 .................................................. 2648
                                                                    
hg03944mrp2  3717 ACTGCCTGCGGGGCAGTGATGTCTGGCCACCGGCTCACACCAATGACTTG 3766

             3801 ----+----*----+----*----+----*----+----*----+----* 3850
msh37311     2648 .................................................. 2648
                                                                    
hg03944mrp2  3767 GTCCTGGGGTGGCAGAAGCAGCAGGTGACAGGAGCAGGGCCCCTGTCCCT 3816

             3851 ----+----*----+----*----+----*----+----*----+----* 3900
msh37311     2648 .....CTGCTCTTGTAGTCCCCATGACCCATATTCTTCACCC.....AGG 2687
                       |||  | ||| || |||| | | ||  || | | | |      ||
hg03944mrp2  3817 CTCTTCTGGCCCTGTGGTACCCAGGCCACACGTTGTGCCCGCTCTTGGGG 3866

             3901 ----+----*----+----*----+----*----+----*----+----* 3950
msh37311     2688 AGAACAGGCTGTCCACCTCACATTGCTTTGCCACTGTCTGGCCTCCTAGG 2737
                     || ||||||      |||    |  ||| |||||  | |  ||  ||
hg03944mrp2  3867 CTGACCGGCTGTAGGGACCACCAGCCGCTGCTACTGTGGGCCGCCCCGGG 3916

             3951 ----+----*----+----*----+----*----+----*----+----* 4000
msh37311     2738 TCGGATGCCACAGTGGTTTGCTGTCATA...................... 2765
                   | |      ||| | |||  ||   ||                      
hg03944mrp2  3917 GCAGGGTGGGCAGGGCTTTTGTGGGTTATGAGGACACAGAAGTCCCTGAG 3966

             4001 ----+----*----+----*----+----*----+----*----+----* 4050
msh37311     2766 .................................................. 2766
                                                                    
hg03944mrp2  3967 GCCCCCAGACCTGGCTCAGCCAACCTCCTTCCTCCCCCGGTTGCCCCCCA 4016

             4051 ----+----*----+----*----+----*----+----*----+----* 4100
msh37311     2766 .................................................. 2766
                                                                    
hg03944mrp2  4017 CTCTAAAGCCTCCTCCCTCCCAGCGTCCACTGGCTCCAGGCTCCTCACAA 4066

             4101 ----+----*----+----*----+----*----+----*----+----* 4150
msh37311     2766 .................................................. 2766
                                                                    
hg03944mrp2  4067 CAGCAGCTCATAGACACGGGGCGTCTCCAGGTGGTCCCAGCCCTCCAGAT 4116

             4151 ----+----*----+----*----+----*----+----*----+----* 4200
msh37311     2766 .................................................. 2766
                                                                    
hg03944mrp2  4117 GTTTCTAGCTCTCCAGGTGGGCGCTGTTTTCACGTCTGCCTGCATCCATT 4166

             4201 ----+----*----+----*----+----*----+----*----+----* 4250
msh37311     2766 .................................................. 2766
                                                                    
hg03944mrp2  4167 CATTCCTTCATTCCTCACCTTTATCCTGTTATCTCTATTTTTTTAAGCTA 4216

             4251 ----+----*----+----*----+----*----+----*----+----* 4300
msh37311     2766 .................................................. 2766
                                                                    
hg03944mrp2  4217 CCAGGAAGGAAAGGGAAGAAGAGATCACGAAACTGGGACCCCCAGAAGGG 4266

             4301 ----+----*----+----*----+----*----+----*----+----* 4350
msh37311     2766 .................................................. 2766
                                                                    
hg03944mrp2  4267 AGGAGTGGGCTTTGAACTTAGACATCTACCTCAGAGCTCAAATAGGTTGT 4316

             4351 ----+----*----+----*----+----*----+----*----+----* 4400
msh37311     2766 .................................................. 2766
                                                                    
hg03944mrp2  4317 TTAAAATCACATTCAATTTTCAGATGAAGGGGAACTTTATAGTTTTTTTT 4366

             4401 ----+----*----+----*----+----*----+----*----+----* 4450
msh37311     2766 .................................................. 2766
                                                                    
hg03944mrp2  4367 TTTTTTTTTTTTTTTTTTGGGGCGGAGTCTCACTGTGTTGCCCAGGCTGG 4416

             4451 ----+----*----+----*----+----*----+----*----+----* 4500
msh37311     2766 .................................................. 2766
                                                                    
hg03944mrp2  4417 AGTGCAAATGGCTTGATCTTGGTTCACTGCAACCTCTGCCTCCCAGGTTC 4466

             4501 ----+----*----+----*----+----*----+----*----+----* 4550
msh37311     2766 .................................................. 2766
                                                                    
hg03944mrp2  4467 AAGCAATTCTCTTGCCTCGGCCTCCCGAGTAGCTGGGACTGGAGGCGTGT 4516

             4551 ----+----*----+----*----+----*----+----*----+----* 4600
msh37311     2766 .................................................. 2766
                                                                    
hg03944mrp2  4517 GCCACCATGCCCAGCTAATTCTTGTATTTTTAGTAGAGACGGAGTTTCTC 4566

             4601 ----+----*----+----*----+----*----+----*----+----* 4650
msh37311     2766 .................................................. 2766
                                                                    
hg03944mrp2  4567 CATGTTGGCCAGACTGGTCTCGAACTCCTGACCTCAGGTGATCTGACCGC 4616

             4651 ----+----*----+----*----+----*----+----*----+----* 4700
msh37311     2766 .................................................. 2766
                                                                    
hg03944mrp2  4617 CTTGGCCTCCGAAAGTGCTGAGATTACAGTTGCGAGCCACTGTGCGTGGC 4666

             4701 ----+----*----+----*----+----*----+----*----+----* 4750
msh37311     2766 .................................................. 2766
                                                                    
hg03944mrp2  4667 CAGAACTTTATAATAAGAGACTTGAAGCTGGGTGTGACGGTGCACGCCTC 4716

             4751 ----+----*----+----*----+----*----+----*----+----* 4800
msh37311     2766 .................................................. 2766
                                                                    
hg03944mrp2  4717 TGGTCCCAGCTGCTCGGGAGGCCGGGACAGAAGGATCACCTTGAGGCCAG 4766

             4801 ----+----*----+----*----+----*----+----*----+----* 4850
msh37311     2766 .................................................. 2766
                                                                    
hg03944mrp2  4767 GAGTTTAAGGCCAGCCTGGGCAACATAGCAAAACCTAGTCCCTAAAATTA 4816

             4851 ----+----*----+----*----+----*----+----*----+----* 4900
msh37311     2766 .................................................. 2766
                                                                    
hg03944mrp2  4817 AAAAAAAAAAAAAAAAAAAAGGAAAATAAAGGAGACTTGAAATTTTTGAA 4866

             4901 ----+----*----+----*----+----*----+----*----+----* 4950
msh37311     2766 .................................................. 2766
                                                                    
hg03944mrp2  4867 CTAAATAGTGGTGATGGCTACACATTGTGAATGTAATTAACACCACTGAG 4916

             4951 ----+----*----+----*----+----*----+----*----+----* 5000
msh37311     2766 .................................................. 2766
                                                                    
hg03944mrp2  4917 TTAAACACTTAAAATGGTTAAAATGGCAAATTGTATGTTATACCTATTTT 4966

             5001 ----+----*----+----*----+----*----+----*----+----* 5050
msh37311     2766 .................................................. 2766
                                                                    
hg03944mrp2  4967 ACTACAATAAAAAGTATAAAAAAGAGAAGATATTTAGGTGACTTACAGCA 5016

             5051 ----+----*----+----*----+----*----+----*----+----* 5100
msh37311     2766 .........................AATAAATGCTCTGTAACTGCCGC.. 2788
                                           || ||||| ||| |   ||  ||  
hg03944mrp2  5017 ACCAATTGCAACAAAACAAAATGTTAAGAAATGATCTTTTTATGAGGCAA 5066

             5101 ----+----*----+----*----+----*----+----*----+----* 5150
msh37311     2789 .................................................. 2789
                                                                    
hg03944mrp2  5067 TTGGAAATTTGAACACTGATCAACTATAGGATGATTGGAATTATTAATTT 5116

             5151 ----+----*----+----*----+----*----+----*----+----* 5200
msh37311     2789 .................................................. 2789
                                                                    
hg03944mrp2  5117 TTAAAGGTGTGATAAGATGCTGCACTTGGCTGGGCACAGTGGCACATGCC 5166

             5201 ----+----*----+----*----+----*----+----*----+----* 5250
msh37311     2789 .................................................. 2789
                                                                    
hg03944mrp2  5167 TGTAATCCCAGCTACTTGGCAGGCTGAGGTGGGAGAATCGCTTGAGCTCA 5216

             5251 ----+----*----+----*----+----*----+----*----+----* 5300
msh37311     2789 .................................................. 2789
                                                                    
hg03944mrp2  5217 GGAGTTCGAGACCAGCCTGGGCAACGTGGCGAAATCCCCGTCTTTACAAA 5266

             5301 ----+----*----+----*----+----*----+----*----+----* 5350
msh37311     2789 .................................................. 2789
                                                                    
hg03944mrp2  5267 AACAAACAAACAAACAAAAAAGATATTGCAGTTGTGTTGTAAGCGTCCTT 5316

             5351 ----+----*----+----*----+----*----+----*----+----* 5400
msh37311     2789 .................................................. 2789
                                                                    
hg03944mrp2  5317 ATCTTTCAGAGCTACATAGTGGAATGTTTATGGAATATTTAGGATAAATG 5366

             5401 ----+----*----+----*----+----*----+----*----+----* 5450
msh37311     2789 .................................................. 2789
                                                                    
hg03944mrp2  5367 ATATAGGCATTTGGGATTTGCTGCAAAATGACCCAGAGGCAGGGGTCAGG 5416

             5451 ----+----*----+----*----+----*----+----*----+----* 5500
msh37311     2789 .................................................. 2789
                                                                    
hg03944mrp2  5417 GGGAGAGGTAGAGATGAGACAAGAGGTAGAGGGGAGAGGTAGAGGTAGCC 5466

             5501 ----+----*----+----*----+----*----+----*----+----* 5550
msh37311     2789 .................................................. 2789
                                                                    
hg03944mrp2  5467 ACGAGCTGATAATTACAGACAAGAGATGCGGAGTATGTGGGGGCTCATTA 5516

             5551 ----+----*----+----*----+----*----+----*----+----* 5600
msh37311     2789 .................................................. 2789
                                                                    
hg03944mrp2  5517 TCCTGCATAGTCTATCTTTGTATATCTTTGAACTTTTCAAGAATAAAAAA 5566

             5601 ----+----*--- 5613
msh37311     2789 ............. 2789
                               
hg03944mrp2  5567 GCTTAAAAAGTAT 5579