Comparison of KIAA cDNA sequences between mouse and human (KIAA0086)
<<Original sequence data>>
mouse mKIAA0086 (msh32285) length: 3287 bp, CDS: 1 - 2955
human KIAA0086 (ha03611) length: 4468 bp, CDS: 907 - 4041
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: - - - -
CDS: 1045 - 4083 2156 772 26.4
3'UTR: 4084 - 4516 198 137 40.9
amino acid
CDS: 1045 - 4083 627 372 37.2
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
msh32285 1 .................................................. 1
ha03611 1 GGACTCTGAGGGCTTTTTGGAGCTCGCTATGCTTAACCTGGAGATGATTA 50
51 ----+----*----+----*----+----*----+----*----+----* 100
msh32285 1 .................................................. 1
ha03611 51 AGGCCCCGCTTCCTGGCCTCCCAGCCTCTAATGCCAAAAGATAAGGGAGA 100
101 ----+----*----+----*----+----*----+----*----+----* 150
msh32285 1 .................................................. 1
ha03611 101 GGCTGGCGTGTGACCCCGTTTTGAGTCAGGTGGACAGAGGGCTGGCCACC 150
151 ----+----*----+----*----+----*----+----*----+----* 200
msh32285 1 .................................................. 1
ha03611 151 TTCGGAACCATGGGTGCAATACGGAGTCAGACCTCAATACAAGCCCACTC 200
201 ----+----*----+----*----+----*----+----*----+----* 250
msh32285 1 .................................................. 1
ha03611 201 TTTCACATATTTGAACTTTTTTCACATATCAACTTTTTTTGTTCACTGTG 250
251 ----+----*----+----*----+----*----+----*----+----* 300
msh32285 1 .................................................. 1
ha03611 251 CAGGGATTGTTCATTGCTGCTGGAGGAAGATCATGGACTGTCGCGGGAAA 300
301 ----+----*----+----*----+----*----+----*----+----* 350
msh32285 1 .................................................. 1
ha03611 301 CTGAAGTGGTTGAGTATCCACTAGTCGTGGATGAGGGCAGTGACTTCGCA 350
351 ----+----*----+----*----+----*----+----*----+----* 400
msh32285 1 .................................................. 1
ha03611 351 GTTTTTTGCGAATTACACATCTCTTTGATTATGTTGTGACTAGTTTTGTT 400
401 ----+----*----+----*----+----*----+----*----+----* 450
msh32285 1 .................................................. 1
ha03611 401 AGATAGTCATTTAGTGTTTGGGATACCTGTTAAGCCCTTTGTCCAGGGAC 450
451 ----+----*----+----*----+----*----+----*----+----* 500
msh32285 1 .................................................. 1
ha03611 451 TGTGGTTGGATTTATGAATTATTTGGACGGTTGTCCACTTGAAAGAACTG 500
501 ----+----*----+----*----+----*----+----*----+----* 550
msh32285 1 .................................................. 1
ha03611 501 ACAGTAGCTTCATAACAATGTTACAAATCTCGTTCTAAGATTAAGCTGTT 550
551 ----+----*----+----*----+----*----+----*----+----* 600
msh32285 1 .................................................. 1
ha03611 551 GAACCTATATTTGCCATTAGCGCTTAATTTTTGAAGTATTATTTTTATGA 600
601 ----+----*----+----*----+----*----+----*----+----* 650
msh32285 1 .................................................. 1
ha03611 601 ATCAAGCCCTGGAAAAGGACAAGATATTTGAATGAAATAGCACCCATAAT 650
651 ----+----*----+----*----+----*----+----*----+----* 700
msh32285 1 .................................................. 1
ha03611 651 GGAGAACTTCACAGTTGCTACTCCTGTGATAGGTTTATCTTAGTTTCATT 700
701 ----+----*----+----*----+----*----+----*----+----* 750
msh32285 1 .................................................. 1
ha03611 701 GTGGTATAAATGGAATAGCAGGTGTTGTCAGGTACAAGGTTTGTAGCTTG 750
751 ----+----*----+----*----+----*----+----*----+----* 800
msh32285 1 .................................................. 1
ha03611 751 CCAATATGTTCATTACCAACACTGCAGATTCCCATTGAGTTGGTGGGGGT 800
801 ----+----*----+----*----+----*----+----*----+----* 850
msh32285 1 .................................................. 1
ha03611 801 TTTGTTACCTTTGTTTTTTTTCTCAGCAAAATAATTCTATAACTTTTTGT 850
851 ----+----*----+----*----+----*----+----*----+----* 900
msh32285 1 .................................................. 1
ha03611 851 TTGTGACAAGAAATGGACTTTCAGTTTACTTAAGATTAATACTTCTTGAA 900
901 ----+----*----+----*----+----*----+----*----+----* 950
msh32285 1 .................................................. 1
ha03611 901 TGATAAAATCATTTTGCCATGTTAGAAGACATTTCCGAAGAAGACATTTG 950
N H F A M L E D I S E E D I W
951 ----+----*----+----*----+----*----+----*----+----* 1000
msh32285 1 .................................................. 1
ha03611 951 GGAATACAAATCTAAAAGAAAACCAAAACGAGTTGATCCAAATAATGGCT 1000
E Y K S K R K P K R V D P N N G S
1001 ----+----*----+----*----+----*----+----*----+----* 1050
H Q
msh32285 1 ............................................CACCAG 6
|||||
ha03611 1001 CTAAAAATATTCTAAAATCTGTTGAAAAAGCAACAGATGGAAAATACCAG 1050
K N I L K S V E K A T D G K Y Q
1051 ----+----*----+----*----+----*----+----*----+----* 1100
S K G N E K R T S E N P E T
msh32285 7 TCAAAA......GGAAATGAAAAAAGGACTTCAGAAAATCCAGGCAAGAC 50
|||||| |||| |||||| | ||||| | || ||
ha03611 1051 TCAAAACGGAGTAGAAACAGAAAAAGAGCCGCAGAAGCTAAAG...AGGT 1097
S K R S R N R K R A A E A K E V
1101 ----+----*----+----*----+----*----+----*----+----* 1150
K D H K V C L A E T D S Q I S A G
msh32285 51 GAAGGACCACAAAGTGTGCCTTGCAGAAACAGACAGTCAGATTTCTGCAG 100
||||||||| ||||| ||||| | | ||| |||||| ||||| |
ha03611 1098 GAAGGACCATGAAGTGCCCCTTGGAAATGCAGGTTGTCAGACTTCTGTTG 1147
K D H E V P L G N A G C Q T S V A
1151 ----+----*----+----*----+----*----+----*----+----* 1200
S S Q S S S C R D E S Q Q S Q N
msh32285 101 GTTCCAGTCAGAGTTCGAGCTGTAGAGATGAGAGTCAGCAGTCTCAAAAC 150
||| ||||||| ||| || ||| |||||| | ||||||| | ||| ||
ha03611 1148 CTTCTAGTCAGAATTCAAGTTGTGGAGATGGTATTCAGCAGACCCAAGAC 1197
S S Q N S S C G D G I Q Q T Q D
1201 ----+----*----+----*----+----*----+----*----+----* 1250
K E T T P K K Q H R T R R G K Q V
msh32285 151 AAAGAGACAACACCGAAAAAGCAACATAGAACTCGCAGAGGGAAGCAAGT 200
|| || || || || ||| | |||||||| | | | | || ||
ha03611 1198 AAGGAAACTACTCCAGGAAAACTCTGTAGAACTCAAAAAAGCCAACACGT 1247
K E T T P G K L C R T Q K S Q H V
1251 ----+----*----+----*----+----*----+----*----+----* 1300
T P K V R P V Y D G Y C P S C Q M
msh32285 201 GACCCCGAAGGTGCGCCCTGTTTATGATGGATACTGCCCAAGCTGCCAGA 250
| |||| ||| | || || ||||||||||||||||| |||| |||||||
ha03611 1248 GTCCCCAAAGATACGTCCAGTTTATGATGGATACTGTCCAAATTGCCAGA 1297
S P K I R P V Y D G Y C P N C Q M
1301 ----+----*----+----*----+----*----+----*----+----* 1350
P F S S L L G Q T P Q W H V F E
msh32285 251 TGCCCTTCTCCTCATTGCTGGGTCAGACGCCCCAGTGGCATGTGTTTGAG 300
|||| || ||||||||| | || ||||| || | |||||||| |||||
ha03611 1298 TGCCTTTTTCCTCATTGATAGGGCAGACACCTCGATGGCATGTTTTTGAA 1347
P F S S L I G Q T P R W H V F E
1351 ----+----*----+----*----+----*----+----*----+----* 1400
C L D S P P I S D T E C P E G L L
msh32285 301 TGTTTGGATTCTCCACCTATCTCTGACACAGAATGTCCCGAGGGTTTGCT 350
||||||||||||||||| |||||| ||||| ||||| || ||| | ||
ha03611 1348 TGTTTGGATTCTCCACCACGCTCTGAAACAGAGTGTCCTGATGGTCTTCT 1397
C L D S P P R S E T E C P D G L L
1401 ----+----*----+----*----+----*----+----*----+----* 1450
C T S T I P S H Y K K Y T H I L L
msh32285 351 GTGTACTTCCACAATTCCTTCCCATTATAAGAAATACACTCACATCCTGC 400
|||||| || || ||||||| ||||| |||| |||||||||| ||||||
ha03611 1398 GTGTACCTCAACCATTCCTTTTCATTACAAGAGATACACTCACTTCCTGC 1447
C T S T I P F H Y K R Y T H F L L
1451 ----+----*----+----*----+----*----+----*----+----* 1500
A Q S R D S K E P L G N P S D A
msh32285 401 TCGCTCAAAGTCGAGATAGCAAGGAGCCTCTGGGCAACCCCTCGGATGCA 450
| |||||||| | | | | | | ||| | ||| ||| || |||
ha03611 1448 TAGCTCAAAGCAGGGCTGGTGATCATCCTTTTAGCAGCCCATCACCTGCG 1497
A Q S R A G D H P F S S P S P A
1501 ----+----*----+----*----+----*----+----*----+----* 1550
L A G L F A A A A P G S P C N L E
msh32285 451 TTGGCTGGGCTGTTTGCTGCAGCAGCGCCAGGTTCTCCTTGTAACCTTGA 500
| | ||| || || | | |||| | ||||| ||||||
ha03611 1498 TCAGGTGGCAGTTTCAGTGAGACTAAGTCAGGCGTCCTTTGTAGCCTTGA 1547
S G G S F S E T K S G V L C S L E
1551 ----+----*----+----*----+----*----+----*----+----* 1600
E R R S M T L - T E N * V S
msh32285 501 GGAAAGACGCTCTATGACTCTGA...AAACTGAGAACTTAAGAAAAGTCT 547
||||||| | ||| | || || ||||||| |||| || |
ha03611 1548 GGAAAGATGGTCTTCGTATCAGAACCAAACTGATAACT......CGGTTT 1591
E R W S S Y Q N Q T D N S V S
1601 ----+----*----+----*----+----*----+----*----+----* 1650
D H S L L M M Q Y L E T S Q P P
msh32285 548 CAGATCACTCTTTGTTGATGATGCAGTATCTAGAAACATCTCAGCCTCCA 597
|| || | | || ||||||| |||||| | ||| |||| | |||
ha03611 1592 CAAATGATCCCTTATTGATGACACAGTATTTTAAAAAGTCTCCGTCTCTG 1641
N D P L L M T Q Y F K K S P S L
1651 ----+----*----+----*----+----*----+----*----+----* 1700
A E I N R K T S P C S Q T -
msh32285 598 GCTGAAATCAACAGGAAGAATGTCTCTTCCCCATGTTCTCAAACATC... 644
||||| || |||| ||| | | ||||||||
ha03611 1642 ACTGAAGCCAGTGAAAAGA......TTTCTACTCATATCCAAACATCCCA 1685
T E A S E K I S T H I Q T S Q
1701 ----+----*----+----*----+----*----+----*----+----* 1750
P V P Q C A E F V K R D Q L V G G
msh32285 645 GCCAGTTCCACAGTGTGCAGAGTTCGTCAAGAGAGACCAGCTGGTGGGAG 694
| || || ||| | | |||| || || ||| ||| | || |||||||
ha03611 1686 ACAAGCTCTACAATTTACAGATTTTGTTGAGAATGACAAACTAGTGGGAG 1735
Q A L Q F T D F V E N D K L V G V
1751 ----+----*----+----*----+----*----+----*----+----* 1800
G S P L A S K S G
msh32285 695 GTGGATCGCCTCTTGCTGAGGTTGCATTAAACAGCCAAAGCAAGTCAGGG 744
|| | || |||||| || ||| ||||
ha03611 1736 TTGCTTTGCGTCTTGC.....................AAACAACTCAGAA 1764
A L R L A N N S E
1801 ----+----*----+----*----+----*----+----*----+----* 1850
S M G L P L P E N D T D S C E I S
msh32285 745 AGTATGGGTTTGCCATTGCCAGAAAATGACACTGACAGCTGTGAGATCTC 794
|| |||||||||||||||||||||| |||||| |||||
ha03611 1765 CACATAAATTTGCCATTGCCAGAAAATGACTTCAGTGACTGTGAAATCTC 1814
H I N L P L P E N D F S D C E I S
1851 ----+----*----+----*----+----*----+----*----+----* 1900
Y S P L H S D E E T Y D I D Q E L
msh32285 795 TTATTCTCCGCTGCACAGTGATGAAGAGACTTACGACATAGACCAAGAGC 844
|||||||| || || ||||||||||| ||| | || || || || | |
ha03611 1815 CTATTCTCCACTTCAAAGTGATGAAGACACTCATGATATCGATGAAAAAC 1864
Y S P L Q S D E D T H D I D E K P
1901 ----+----*----+----*----+----*----+----*----+----* 1950
D D S Q Q E L F F T Q S S K D S
msh32285 845 TGGATGATTCACAGCAGGAACTATTTTTTACCCAAAGCTCTAAAGACAGC 894
|||||||||||| | |||| ||||||||| ||||||| ||||| ||
ha03611 1865 CGGATGATTCACAAGAACAACTGTTTTTTACCGAAAGCTCAAAAGATGGC 1914
D D S Q E Q L F F T E S S K D G
1951 ----+----*----+----*----+----*----+----*----+----* 2000
S L E E D - S A I F E N L H G
msh32285 895 AGCCTAGAAGAAGATG......GCTCTGCCATATTTGAAAACCTTCATGG 938
||||| |||||||||| ||| || | ||| |||| | |||||
ha03611 1915 AGCCTCGAAGAAGATGATGACAGCTGTGGTTTTTTTAAAAAACGACATGG 1964
S L E E D D D S C G F F K K R H G
2001 ----+----*----+----*----+----*----+----*----+----* 2050
P S P K E A E G I R P T A K S L V
msh32285 939 TCCCTCCCCAAAGGAAGCAGAGGGGATCCGGCCCACAGCGAAGAGCCTGG 988
||||| | ||||| || | || | | |||| || ||| ||| |
ha03611 1965 TCCCTTACTGAAGGACCAGGATGAGAGCTGCCCCAAAGTGAACAGCTTCT 2014
P L L K D Q D E S C P K V N S F L
2051 ----+----*----+----*----+----*----+----*----+----* 2100
A Q A R C S A P S E G S T L S
msh32285 989 TTGCCCAGGCTAGGTGTAGT...GCACCGAGTGAAGGCAGTACACTAAGT 1035
| | | || || || | | | | | | | || || |||| |
ha03611 2015 TAACTCGGGATAAGTATGATGAAGGATTGTATAGATTCAATAGTCTAAAT 2064
T R D K Y D E G L Y R F N S L N
2101 ----+----*----+----*----+----*----+----*----+----* 2150
D S F L L L S Y T S N R L S Q E D
msh32285 1036 GACTCTTTTCTGCTTCTCTCCTACACCTCGAACAGGCTTTCCCAAGAAGA 1085
|| | | || | | | || | | | || || | | ||
ha03611 2065 GATTTGTCTCAACCTATTTCTCAAAATAATGAGAGTACTTTGCCTTATGA 2114
D L S Q P I S Q N N E S T L P Y D
2151 ----+----*----+----*----+----*----+----*----+----* 2200
L P H T D A A F H L L S P A L A V
msh32285 1086 CCTACCACACACAGATGCGGCCTTCCACTTGCTTTCACCTGCCTTGGCAG 1135
|| || || | || | || ||| || ||||||| |||||||
ha03611 2115 TCTGGCATGTACTGGTGGTGATTTTGTGTTGTTTCCACCTGCATTGGCAG 2164
L A C T G G D F V L F P P A L A G
2201 ----+----*----+----*----+----*----+----*----+----* 2250
G G A A S N Y Q T S K A K L D E
msh32285 1136 TGGGAGGTGCTGCTTCTAATTATCAGACCAGTAAGGCCAAGCTCGACGAG 1185
| |||||||||| | ||||| | | ||| || || | || |||
ha03611 2165 GGAAGCTTGCTGCTTCTGTTCATCAGGCAACTAAAGCAAAACCTGATGAG 2214
K L A A S V H Q A T K A K P D E
2251 ----+----*----+----*----+----*----+----*----+----* 2300
P E F L S L A S S H Q Q Q K I E
msh32285 1186 CCAGAAAAATTCCTCTCACTTGCATCAAGTCATCAGCAACAGAAAATTGA 1235
|||| |||| | |||| | ||||| | | ||| ||||| ||||||
ha03611 2215 CCAG...AATTTCACTCAGCTCAATCAAATAAACAGAAACAGGTAATTGA 2261
P E F H S A Q S N K Q K Q V I E
2301 ----+----*----+----*----+----*----+----*----+----* 2350
T S A V G N Q T S L P L L T R A R
msh32285 1236 AACATCAGCTGTTGGCAATCAGACTTCTCTGCCGTTACTTACAAGAGCCA 1285
| |||| ||||| |||||| |||||| |||||| ||| || |
ha03611 2262 AGAATCATCTGTTTACAATCAAGTTTCTCTTCCGTTAGTTAAGAGTTTAA 2311
E S S V Y N Q V S L P L V K S L M
2351 ----+----*----+----*----+----*----+----*----+----* 2400
S K P L E K E G G K C L P L H P
msh32285 1286 GGTCAAAGCCACTTGAAAAGGAGGGAGGCAAGTGTCTGCCTTTGCATCCA 1335
|| || || |||||| ||| || || ||| ||| || |||
ha03611 2312 TGTTGAAACCTTTTGAAAGTCAGGTAGAAGGGTATCTTTCTTCCCAACCA 2361
L K P F E S Q V E G Y L S S Q P
2401 ----+----*----+----*----+----*----+----*----+----* 2450
T Q S Q T R G S P R K G -
msh32285 1336 ACCCAAAGTCAGACCAGAGGATCACCGCGCAAGGGCTT............ 1373
||||||| | | ||| || | | | || |||
ha03611 2362 ACCCAAAATACAATTAGAAAATTATCAAGTGAGAACTTGAATGCTAAGAA 2411
T Q N T I R K L S S E N L N A K N
2451 ----+----*----+----*----+----*----+----*----+----* 2500
G A P G
msh32285 1374 .......................................GGGTGCTCCAG 1384
||||| ||||
ha03611 2412 TAATACTAACTCAGCATGTTTCTGCAGAAAGGCATTAGAGGGTGTGCCAG 2461
N T N S A C F C R K A L E G V P V
2501 ----+----*----+----*----+----*----+----*----+----* 2550
A N C A C R N A Q K R S S M P L
msh32285 1385 GGGCTAACTGTGCCTGCAGGAATGCACAGAAGCGCTCTAGCATGCCTCTT 1434
| ||| | | ||| || | || ||||| | ||| |
ha03611 2462 TTGGTAAAGCTACAATTTTAAATACAGAAAACTTGTCTAGTACACCTGCT 2511
G K A T I L N T E N L S S T P A
2551 ----+----*----+----*----+----*----+----*----+----* 2600
D K P L G T S P S S P K C S P S Q
msh32285 1435 GACAAGCCCTTGGGCACATCGCCTTCCAGTCCCAAGTGCAGCCCGAGCCA 1484
||| ||| | || |||||| ||| |||| | | || ||
ha03611 2512 CCGAAGTATTTGAAAATATTGCCTTCTGGTCTTAAGTATAATGCAAGACA 2561
P K Y L K I L P S G L K Y N A R H
2601 ----+----*----+----*----+----*----+----*----+----* 2650
P S K K V M K Q M D I G V F F G L
msh32285 1485 ACCGTCTAAGAAAGTAATGAAGCAAATGGATATAGGCGTGTTTTTTGGAC 1534
|| |||| || ||||||||||||||||||||||| |||| ||||||||
ha03611 2562 TCCTTCTACCAAGGTAATGAAGCAAATGGATATAGGTGTGTATTTTGGAC 2611
P S T K V M K Q M D I G V Y F G L
2651 ----+----*----+----*----+----*----+----*----+----* 2700
P P K R Q E T S L R E S A S E
msh32285 1535 TACCACCCAAAAGA...CAAGAGACGTCACTGAGGGAAAGCGCATCAGAA 1581
|||| ||||||||| |||||| | || ||||||| |||| ||||
ha03611 2612 TACCTCCCAAAAGAAAGGAAGAGAAATTGCTAGGGGAAAGTGCATTAGAA 2661
P P K R K E E K L L G E S A L E
2701 ----+----*----+----*----+----*----+----*----+----* 2750
G P N V S P V V S P N Q K R P R L
msh32285 1582 GGGCCCAATGTCAGTCCAGTTGTGAGTCCCAACCAAAAGAGGCCCCGGTT 1631
||| || | | ||||||| ||||| || ||||||||| || |
ha03611 2662 GGGATAAACTTAAATCCAGTTCCAAGTCCTAATCAAAAGAGGTCCTCGCA 2711
G I N L N P V P S P N Q K R S S Q
2751 ----+----*----+----*----+----*----+----*----+----* 2800
C K R K A Q S S L S D L E F D A K
msh32285 1632 GTGCAAGAGGAAAGCCCAGAGCTCTCTGAGTGACTTAGAGTTTGATGCAA 1681
||||||||||||||| | | ||| | ||||| ||||| ||||||||||
ha03611 2712 GTGCAAGAGGAAAGCAGAAAAATCTTTAAGTGATTTAGAATTTGATGCAA 2761
C K R K A E K S L S D L E F D A S
2801 ----+----*----+----*----+----*----+----*----+----* 2850
N L N E S Q H S V G L S G E K R
msh32285 1682 AGAATTTAAATGAGAGTCAGCACTCTGTGGGACTGTCTGGAGAGAAGCGG 1731
| |||| |||||||||||| ||||||| ||| ||| | |||| |
ha03611 2762 GTACTTTACATGAGAGTCAGCTTTCTGTGGAACTTTCTAGTGAGAGGTCA 2811
T L H E S Q L S V E L S S E R S
2851 ----+----*----+----*----+----*----+----*----+----* 2900
Q H R R K R H K T S N S P R E G P
msh32285 1732 CAACATCGAAGAAAGAGACATAAAACGTCAAATTCACCACGGGAAGGACC 1781
|| | || || ||||||| || || ||||||||||| | ||||||| |
ha03611 2812 CAGCGTCAAAAAAAGAGATGTAGAAAGTCAAATTCACTGCAGGAAGGAGC 2861
Q R Q K K R C R K S N S L Q E G A
2901 ----+----*----+----*----+----*----+----*----+----* 2950
C Q R R S G H L M N T E L G P V
msh32285 1782 ATGCCAGAGAAGGTCAGGTCACCTCATGAACAACCCAGAGTTGGGACCAG 1831
|| |||| || |||| |||||| || || | |||| | | | |||
ha03611 2862 GTGTCAGAAGAGATCAGATCACCTTATTAATA...CAGAATCTGAAGCAG 2908
C Q K R S D H L I N T E S E A V
2951 ----+----*----+----*----+----*----+----*----+----* 3000
S L - K A F V R R T R G R T
msh32285 1832 TCAGCCTCAG......CAAAGCCTTCGTGAGACGGACTCGTGGCAGGACG 1875
||| | || ||||| |||| | | ||| ||| || |
ha03611 2909 TCAATTTAAGTAAAGTCAAAGTCTTCACAAAATCAGCTCATGGTGGGCTG 2958
N L S K V K V F T K S A H G G L
3001 ----+----*----+----*----+----*----+----*----+----* 3050
Q R G N M N I S E S S G A G E V R
msh32285 1876 CAGAGAGGGAACATGAACATTTCAGAGTCCTCTGGTGCAGGGGAAGTGAG 1925
|| || || |||| ||| || ||||||| ||| || ||| | | ||
ha03611 2959 CAAAGGGGCAACAAGAAAATCCCAGAGTCATCTAATGTAGGAGGATCAAG 3008
Q R G N K K I P E S S N V G G S R
3051 ----+----*----+----*----+----*----+----*----+----* 3100
R T C P F Y K R I P G T G F T V
msh32285 1926 AAGA...ACATGTCCGTTCTATAAGAGAATCCCCGGGACTGGCTTCACTG 1972
|| | |||||||| |||||||||| ||| || || || ||||| || |
ha03611 3009 AAAAAAGACATGTCCATTCTATAAGAAAATACCTGGAACCGGCTTTACAG 3058
K K T C P F Y K K I P G T G F T V
3101 ----+----*----+----*----+----*----+----*----+----* 3150
D A F Q Y G E I E G C T A Y F L
msh32285 1973 TGGATGCTTTTCAGTACGGTGAGATCGAAGGCTGCACCGCCTACTTCCTC 2022
| ||||| |||||||| || | | | ||||| ||||| ||||| || |||
ha03611 3059 TTGATGCCTTTCAGTATGGCGTGGTTGAAGGTTGCACAGCCTATTTTCTC 3108
D A F Q Y G V V E G C T A Y F L
3151 ----+----*----+----*----+----*----+----*----+----* 3200
T H F H S D H Y A G L S K D F T R
msh32285 2023 ACACATTTCCATTCTGATCATTACGCCGGGTTGTCCAAGGACTTCACAAG 2072
|||||||| |||||||||||||| || || ||||| || ||||||||
ha03611 3109 ACACATTTTCATTCTGATCATTATGCTGGATTGTCTAAACACTTCACATT 3158
T H F H S D H Y A G L S K H F T F
3201 ----+----*----+----*----+----*----+----*----+----* 3250
P V Y C S E I T G N L L K K K L R
msh32285 2073 GCCAGTCTATTGCAGCGAGATAACAGGCAATCTGTTGAAGAAGAAGCTTC 2122
||||| ||||| || |||||||| |||||| |||||||||| |||||||
ha03611 3159 TCCAGTTTATTGTAGTGAGATAACTGGCAATTTGTTGAAGAACAAGCTTC 3208
P V Y C S E I T G N L L K N K L H
3251 ----+----*----+----*----+----*----+----*----+----* 3300
V Q E Q Y I R Q L P M D T E C V
msh32285 2123 GAGTGCAAGAGCAATACATCCGTCAGTTGCCGATGGACACCGAGTGTGTC 2172
|||||||| ||||| || | | ||||| ||||||| || ||| |
ha03611 3209 ATGTGCAAGAACAATATATTCACCCATTGCCACTGGACACTGAATGTATT 3258
V Q E Q Y I H P L P L D T E C I
3301 ----+----*----+----*----+----*----+----*----+----* 3350
V D S V K V V L L D A N H C P G A
msh32285 2173 GTGGACAGCGTCAAGGTGGTTTTGCTGGATGCCAATCACTGTCCAGGTGC 2222
||| | | ||||| || |||||||| |||||||||||||||||||||||
ha03611 3259 GTGAATGGTGTCAAAGTTGTTTTGCTTGATGCCAATCACTGTCCAGGTGC 3308
V N G V K V V L L D A N H C P G A
3351 ----+----*----+----*----+----*----+----*----+----* 3400
T M I L F Q L P N G A V I L H T G
msh32285 2223 TACCATGATCCTTTTCCAGCTTCCCAACGGTGCTGTCATACTGCACACCG 2272
| ||||||||| || | ||||| || ||| |||||||| | ||||| |
ha03611 3309 TGTCATGATCCTCTTTTATCTTCCTAATGGTACTGTCATATTACACACGG 3358
V M I L F Y L P N G T V I L H T G
3401 ----+----*----+----*----+----*----+----*----+----* 3450
D F R A D P S M E R S R L A G R
msh32285 2273 GAGACTTCCGAGCGGACCCCAGCATGGAACGCTCTCGCCTGGCGGGCCGC 2322
|||||||| |||| || |||||||||||||| |||| || |||| ||
ha03611 3359 GAGACTTCAGAGCAGATCCCAGCATGGAACGTTCTCTTCTTGCGGACCAG 3408
D F R A D P S M E R S L L A D Q
3451 ----+----*----+----*----+----*----+----*----+----* 3500
K V H T L F L D T T Y C S P E Y T
msh32285 2323 AAAGTCCACACACTGTTCCTGGATACCACATACTGCAGCCCAGAATATAC 2372
|||||||| | |||| | | ||||||||||| || ||||||||||| ||
ha03611 3409 AAAGTCCATATGCTGTACTTAGATACCACATATTGTAGCCCAGAATACAC 3458
K V H M L Y L D T T Y C S P E Y T
3501 ----+----*----+----*----+----*----+----*----+----* 3550
F P S Q Q E V I Q F A I N T A F E
msh32285 2373 CTTCCCGTCACAGCAGGAGGTTATCCAGTTTGCCATCAACACTGCCTTTG 2422
||| || || ||||| |||||||||| |||||||||||||||||||||||
ha03611 3459 CTTTCCATCTCAGCAAGAGGTTATCCGGTTTGCCATCAACACTGCCTTTG 3508
F P S Q Q E V I R F A I N T A F E
3551 ----+----*----+----*----+----*----+----*----+----* 3600
A V T L N P R A L V V C G T Y C
msh32285 2423 AGGCTGTAACTCTAAACCCACGTGCCCTTGTTGTCTGTGGCACTTACTGC 2472
||||||||||||||||||||| ||| ||||||||||||||||||||||
ha03611 3509 AGGCTGTAACTCTAAACCCACATGCTCTTGTTGTCTGTGGCACTTACTCT 3558
A V T L N P H A L V V C G T Y S
3601 ----+----*----+----*----+----*----+----*----+----* 3650
I G K E K V F L A I A D V L G S K
msh32285 2473 ATCGGAAAGGAGAAAGTCTTCCTAGCCATTGCCGATGTTTTAGGTTCAAA 2522
|| ||||| ||||||||||||||||||||||| |||||||||||||||||
ha03611 3559 ATTGGAAAAGAGAAAGTCTTCCTAGCCATTGCTGATGTTTTAGGTTCAAA 3608
I G K E K V F L A I A D V L G S K
3651 ----+----*----+----*----+----*----+----*----+----* 3700
V G M S Q E K Y K T L Q C L N I P
msh32285 2523 GGTGGGCATGTCCCAAGAAAAGTATAAAACTTTGCAGTGCCTCAATATAC 2572
|||||||||||||| ||||| ||||||||| | ||||||||||||||||
ha03611 3609 AGTGGGCATGTCCCAGGAAAAATATAAAACTCTACAGTGCCTCAATATAC 3658
V G M S Q E K Y K T L Q C L N I P
3701 ----+----*----+----*----+----*----+----*----+----* 3750
E V S S L I T T D M C D S L V H
msh32285 2573 CAGAAGTCAGTTCCCTCATAACCACAGACATGTGCGACTCTTTGGTTCAC 2622
||||| | | ||| ||||| || || ||||||||| || |||||||||
ha03611 3659 CAGAAATTAATTCACTCATCACTACCGACATGTGCAGTTCATTGGTTCAC 3708
E I N S L I T T D M C S S L V H
3751 ----+----*----+----*----+----*----+----*----+----* 3800
L L P M M Q I N F K G L Q S H L K
msh32285 2623 CTCCTCCCAATGATGCAAATTAATTTTAAGGGTTTGCAGAGCCATTTGAA 2672
|| ||||||||||||||||||||||||||||| || ||||| ||||||||
ha03611 3709 CTTCTCCCAATGATGCAAATTAATTTTAAGGGCTTACAGAGTCATTTGAA 3758
L L P M M Q I N F K G L Q S H L K
3801 ----+----*----+----*----+----*----+----*----+----* 3850
K C G G K Y D Q I L A F R P T G W
msh32285 2673 GAAGTGTGGTGGGAAATACGATCAGATTTTGGCGTTCCGACCCACAGGAT 2722
||||||||||||||||||| ||||||||||||| || ||||| |||||||
ha03611 3759 GAAGTGTGGTGGGAAATACAATCAGATTTTGGCATTTCGACCTACAGGAT 3808
K C G G K Y N Q I L A F R P T G W
3851 ----+----*----+----*----+----*----+----*----+----* 3900
T H S N N I T S T A D I I P Q T
msh32285 2723 GGACACACTCTAACAACATAACTAGCACAGCGGATATTATTCCCCAGACA 2772
|||||||||||||||| | ||||| | ||| ||| |||||||||||||
ha03611 3809 GGACACACTCTAACAAGTTCACTAGAATAGCAGATGTTATTCCCCAGACC 3858
T H S N K F T R I A D V I P Q T
3901 ----+----*----+----*----+----*----+----*----+----* 3950
R G N I S I Y G I P Y S E H S S Y
msh32285 2773 AGAGGAAATATATCGATATATGGGATTCCCTACAGTGAACACAGCAGCTA 2822
| |||||| || || |||||||| ||||| ||||||||||||||||||||
ha03611 3859 AAAGGAAACATTTCAATATATGGAATTCCTTACAGTGAACACAGCAGCTA 3908
K G N I S I Y G I P Y S E H S S Y
3951 ----+----*----+----*----+----*----+----*----+----* 4000
L E M K R F V Q W L K P Q K I I P
msh32285 2823 CTTAGAAATGAAGCGTTTTGTCCAGTGGCTGAAGCCACAGAAAATCATCC 2872
| ||||||||||||| |||||||||||||||||||| ||||||||||| |
ha03611 3909 CCTAGAAATGAAGCGCTTTGTCCAGTGGCTGAAGCCCCAGAAAATCATAC 3958
L E M K R F V Q W L K P Q K I I P
4001 ----+----*----+----*----+----*----+----*----+----* 4050
T V N V G S F R S R N T M E K Y
msh32285 2873 CCACTGTCAATGTCGGCAGCTTTCGGTCTAGGAACACGATGGAGAAATAC 2922
| ||||| ||||| |||| || ||||||| ||| |||||||||||
ha03611 3959 CTACTGTAAATGTGGGCACCTGGAAATCTAGGAGCACAATGGAGAAATAT 4008
T V N V G T W K S R S T M E K Y
4051 ----+----*----+----*----+----*----+----*----+----* 4100
F K E W R L E A G Y *
msh32285 2923 TTTAAGGAGTGGAGACTGGAAGCCGGATACTGATGCTGTCACAGACGTCT 2972
|||| ||||||| | ||||||| ||||| ||||| | | | || | |
ha03611 4009 TTTAGAGAGTGGAAATTGGAAGCTGGATATTGATGATACCTCCGAGGATT 4058
F R E W K L E A G Y *
4101 ----+----*----+----*----+----*----+----*----+----* 4150
msh32285 2973 ........GCTGAGTTCCGTACAGCAGGC..GGCGATAATGAAATCTAAA 3012
| | |||||| | | || | || | ||||||| |
ha03611 4059 CAGTAGTAGTTAAGTTCCTTGGATGTAGCTTGTTAGTAGTTAAATCTATA 4108
4151 ----+----*----+----*----+----*----+----*----+----* 4200
msh32285 3013 TTGATGTGAGGTACGGGCCATGAGAAGAACAGCCTCAGGA.......... 3052
|||||| ||| | || | ||| | ||||| ||
ha03611 4109 GAAATGTGAAATAC..ACTTTGTGTGGAAAAACCTCATGAAGATTGTTCA 4156
4201 ----+----*----+----*----+----*----+----*----+----* 4250
msh32285 3053 ......CTGCGCTCCTCCCTCGCTTTGAACAGTGATACACCCAAGGTGCT 3096
| || | |||||||| | | | ||||||
ha03611 4157 GATACTTTATTTTCTCATTTATGTTTGAACA...ACATGTTCGTGGTGCT 4203
4251 ----+----*----+----*----+----*----+----*----+----* 4300
msh32285 3097 GGGTGCCT.TCAGACCCCCCAGTGACCACTGAGAGGAGCTCTTCCCAGTC 3145
| ||||| |||| | || || ||||| | | ||| || |
ha03611 4204 GAATGCCTCTCAGCATCATCAAGGATAACTGAAACTGGGTCTCCCTGGGA 4253
4301 ----+----*----+----*----+----*----+----*----+----* 4350
msh32285 3146 CCTTTCACTCTGAATCTCGTCCCCATGGGTTAACGGTCATCTGCGGCAAC 3195
|| || | | || | | ||| | | | || || | | ||| |
ha03611 4254 CCCTTAATTTCTTGTCCCCTGCCC.TCCATGGGCAGTTATATTCTGCATC 4302
4351 ----+----*----+----*----+----*----+----*----+----* 4400
msh32285 3196 CATGGAGACCAGA..................................... 3208
| | |||
ha03611 4303 AAGCCTTAGAAGAGGAAGCAAAGGCAGATTCAGGGACCAAAAGGATTAAT 4352
4401 ----+----*----+----*----+----*----+----*----+----* 4450
msh32285 3209 .................CACCAAGCATTATCTATGT.............. 3227
||||||||| ||| |
ha03611 4353 GATAATTAATAAAGTAGTTTGAAGCATTATATATATAAGTAATTATGTGT 4402
4451 ----+----*----+----*----+----*----+----*----+----* 4500
msh32285 3228 ......AGTAATGAAACAAACCTTTTATATGATATGTATTCTTAAATAAA 3271
| | |||| | || ||||||||||| ||||| ||||||||||
ha03611 4403 CTTTAAAATTATGAGATGAAACTTTTATATGACGTGTATACTTAAATAAA 4452
4501 ----+----*----+-- 4517
msh32285 3272 ATTTAATATAGAACTT. 3287
| |||||||| || ||
ha03611 4453 A.TTAATATAAAATTTG 4468