Comparison of KIAA cDNA sequences between mouse and human (KIAA1649)
<<Original sequence data>>
mouse mKIAA1649 (msh29358) length: 3264 bp, CDS: 1 - 1362
human KIAA1649 (fk12339) length: 3345 bp, CDS: 2 - 1276
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 90 - 90 1 0 0.0
CDS: 91 - 1365 1118 155 12.2
3'UTR: 1366 - 3528 1103 756 40.7
amino acid
CDS: 91 - 1365 386 39 9.2
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
msh29358 1 GGCCGTCCGGGTTGCCGGAAGCCGCTCTTGACTCCGGCCGCGGGGCGGGC 50
fk12339 1 .................................................. 1
51 ----+----*----+----*----+----*----+----*----+----* 100
R R K M
msh29358 51 TCGCCGCAGTCGGCTTCTCCTCCGTTCTCCGCTAGCTGCGCGCCGCAAGA 100
||| ||||||
fk12339 1 .......................................GCGGAGCAAGA 11
R S K M
101 ----+----*----+----*----+----*----+----*----+----* 150
A D L S L D E L I R K R G T A A
msh29358 101 TGGCCGATCTCTCGCTGGACGAGCTCATCCGGAAGCGCGGGACGGCGGCC 150
|||| || |||| |||||||| |||||| ||||||||||| |||||||
fk12339 12 TGGCGGACATCTCCCTGGACGAACTCATCAGGAAGCGCGGGGCGGCGGCG 61
A D I S L D E L I R K R G A A A
151 ----+----*----+----*----+----*----+----*----+----* 200
K G R L S V R P G I G G V R S R V
msh29358 151 AAGGGACGGCTCAGTGTCAGGCCAGGAATTGGAGGTGTCCGGTCTCGAGT 200
|| |||||||| | || ||| || ||| ||||||||||||| ||||||||
fk12339 62 AAAGGACGGCTTAATGCCAGACCGGGAGTTGGAGGTGTCCGATCTCGAGT 111
K G R L N A R P G V G G V R S R V
201 ----+----*----+----*----+----*----+----*----+----* 250
G I Q H S L V N Q P A R T A T F Q
msh29358 201 TGGAATCCAGCATAGTCTTGTTAACCAGCCAGCTCGCACAGCCACCTTCC 250
||| |||||||| | ||| | | |||| || | ||||||||||||||||
fk12339 112 TGGGATCCAGCAAGGCCTTCTCAGCCAGTCAACACGCACAGCCACCTTCC 161
G I Q Q G L L S Q S T R T A T F Q
251 ----+----*----+----*----+----*----+----*----+----* 300
Q R F D A R Q K I G L S D A R L
msh29358 251 AGCAGAGATTTGACGCCCGACAGAAGATTGGGCTCTCAGATGCTCGGCTC 300
||||||||||||| ||||| ||||||||||| ||||||||||| ||||||
fk12339 162 AGCAGAGATTTGATGCCCGGCAGAAGATTGGCCTCTCAGATGCCCGGCTC 211
Q R F D A R Q K I G L S D A R L
301 ----+----*----+----*----+----*----+----*----+----* 350
K L G V K D A R E K L L Q K D A R
msh29358 301 AAGCTGGGTGTCAAAGATGCCCGGGAAAAGCTTTTGCAGAAAGACGCCCG 350
|| ||||| ||||| ||||||||||| ||||||||||||||||| |||||
fk12339 212 AAACTGGGAGTCAAGGATGCCCGGGAGAAGCTTTTGCAGAAAGATGCCCG 261
K L G V K D A R E K L L Q K D A R
351 ----+----*----+----*----+----*----+----*----+----* 400
F R I K G K V Q D A R E M L N S R
msh29358 351 GTTTCGGATCAAAGGGAAAGTACAGGATGCCAGGGAGATGCTGAACTCAC 400
||||| |||||||||||||| ||||||||||| |||||| ||||||| |
fk12339 262 ATTTCGAATCAAAGGGAAAGTGCAGGATGCCAGAGAGATGTTGAACTCTC 311
F R I K G K V Q D A R E M L N S R
401 ----+----*----+----*----+----*----+----*----+----* 450
K Q Q G T V P Q K P R Q V A D A
msh29358 401 GAAAGCAGCAGGGCACTGTGCCCCAGAAGCCCCGCCAGGTGGCTGATGCC 450
| ||||||||| ||| ||||||||||||||||||||||| |||||||||
fk12339 312 GCAAGCAGCAGACCACGGTGCCCCAGAAGCCCCGCCAGGTTGCTGATGCC 361
K Q Q T T V P Q K P R Q V A D A
451 ----+----*----+----*----+----*----+----*----+----* 500
R E K I S L K R R S P A A F T S P
msh29358 451 CGGGAGAAGATCAGCTTGAAGAGGAGATCCCCTGCTGCGTTCACAAGCCC 500
|||||||||||||||||||||||||| ||||||||||| |||| || |||
fk12339 362 CGGGAGAAGATCAGCTTGAAGAGGAGTTCCCCTGCTGCCTTCATAAACCC 411
R E K I S L K R S S P A A F I N P
501 ----+----*----+----*----+----*----+----*----+----* 550
P I G T V T P A L K L T K T I Q V
msh29358 501 GCCCATTGGGACTGTAACCCCAGCTCTGAAGCTCACCAAAACTATCCAGG 550
||||||||||| || ||||| |||||||||||||||||||| |||||||
fk12339 412 ACCCATTGGGACAGTGACCCCTGCTCTGAAGCTCACCAAAACCATCCAGG 461
P I G T V T P A L K L T K T I Q V
551 ----+----*----+----*----+----*----+----*----+----* 600
P Q Q K A M V P L H A H P A G M
msh29358 551 TTCCACAGCAAAAGGCCATGGTGCCACTTCATGCCCATCCTGCTGGAATG 600
|||||||||| || ||||||| ||||||||| |||||||||| ||||||
fk12339 462 TTCCACAGCAGAAAGCCATGGCACCACTTCATCCCCATCCTGCCGGAATG 511
P Q Q K A M A P L H P H P A G M
601 ----+----*----+----*----+----*----+----*----+----* 650
R I N V V N N H Q A K Q N L Y D L
msh29358 601 AGGATCAATGTTGTCAATAACCACCAGGCTAAACAGAACTTGTATGACCT 650
|| |||||||||||||||||||||||||| |||||||| || ||||||||
fk12339 512 AGAATCAATGTTGTCAATAACCACCAGGCCAAACAGAATTTATATGACCT 561
R I N V V N N H Q A K Q N L Y D L
651 ----+----*----+----*----+----*----+----*----+----* 700
D E D D D I V V P V P P K Q M K F
msh29358 651 GGATGAAGATGATGACATTGTGGTGCCTGTCCCTCCCAAGCAGATGAAGT 700
||||||||||||||| | | | | || ||| | || ||||||||||
fk12339 562 GGATGAAGATGATGATGGTATAGCTTCCGTTCCTACTAAACAGATGAAGT 611
D E D D D G I A S V P T K Q M K F
701 ----+----*----+----*----+----*----+----*----+----* 750
A A T G S L V H H M T G L S S S
msh29358 701 TTGCAGCCACGGGCAGCCTTGTTCACCACATGACTGGACTGAGCAGTTCC 750
|||||||| | ||| || || | ||||||||| |||| || |||||||||
fk12339 612 TTGCAGCCTCAGGCGGCTTTCTCCACCACATGGCTGGGCTAAGCAGTTCC 661
A A S G G F L H H M A G L S S S
751 ----+----*----+----*----+----*----+----*----+----* 800
K L S M S K A L P L T K V V Q N D
msh29358 751 AAGCTGTCCATGTCCAAGGCCCTCCCTCTCACAAAAGTGGTCCAGAATGA 800
||||| |||||||||||||||||||||||||| |||||||| ||||||||
fk12339 662 AAGCTTTCCATGTCCAAGGCCCTCCCTCTCACCAAAGTGGTTCAGAATGA 711
K L S M S K A L P L T K V V Q N D
801 ----+----*----+----*----+----*----+----*----+----* 850
A Y T A P V L P S S V R T K A L T
msh29358 801 TGCCTACACCGCTCCTGTTCTCCCCTCCTCTGTTCGAACCAAAGCCTTGA 850
||| ||||| ||||||| |||||| |||||| ||||||| ||||||||||
fk12339 712 TGCATACACAGCTCCTGCTCTCCCTTCCTCTATTCGAACAAAAGCCTTGA 761
A Y T A P A L P S S I R T K A L T
851 ----+----*----+----*----+----*----+----*----+----* 900
S M S R T L V N K E E P P K E L
msh29358 851 CCAGCATGTCCCGGACGCTGGTGAACAAGGAGGAGCCTCCCAAAGAGCTG 900
||| |||||||||||| |||||||||||||| || || ||||||||||||
fk12339 762 CCAACATGTCCCGGACACTGGTGAACAAGGAAGAACCCCCCAAAGAGCTG 811
N M S R T L V N K E E P P K E L
901 ----+----*----+----*----+----*----+----*----+----* 950
P P A E P V L S P L E G T K M T V
msh29358 901 CCGCCTGCTGAGCCTGTGCTTAGCCCCTTGGAAGGCACCAAGATGACCGT 950
|| ||||||||||||| || ||||| |||||||||||||||||||| ||
fk12339 812 CCAGCTGCTGAGCCTGTTCTCAGCCCATTGGAAGGCACCAAGATGACTGT 861
P A A E P V L S P L E G T K M T V
951 ----+----*----+----*----+----*----+----*----+----* 1000
N N L H P R V T E E D I V E L F C
msh29358 951 GAATAATCTGCACCCCCGAGTCACAGAGGAGGACATAGTTGAGCTTTTCT 1000
||||||||||||||| |||||||| ||||||||||| |||||||||||||
fk12339 862 GAATAATCTGCACCCTCGAGTCACTGAGGAGGACATTGTTGAGCTTTTCT 911
N N L H P R V T E E D I V E L F C
1001 ----+----*----+----*----+----*----+----*----+----* 1050
V C G A L K R A R L V H P G V A
msh29358 1001 GTGTGTGTGGCGCTCTCAAGCGGGCTCGACTGGTCCATCCTGGGGTAGCA 1050
|||||||||| || |||||||| ||||||||||||||||||||||||||
fk12339 912 GTGTGTGTGGGGCCCTCAAGCGAGCTCGACTGGTCCATCCTGGGGTAGCG 961
V C G A L K R A R L V H P G V A
1051 ----+----*----+----*----+----*----+----*----+----* 1100
E V V F V K K D D A I T A Y K K Y
msh29358 1051 GAAGTTGTCTTCGTGAAGAAGGATGACGCCATCACTGCTTATAAGAAGTA 1100
|| || || || ||||| ||||| || |||||||| || |||||||||||
fk12339 962 GAGGTGGTGTTTGTGAAAAAGGACGATGCCATCACCGCATATAAGAAGTA 1011
E V V F V K K D D A I T A Y K K Y
1101 ----+----*----+----*----+----*----+----*----+----* 1150
N N R C L D G Q P M K C N L H M N
msh29358 1101 CAATAACCGATGTCTGGATGGGCAACCTATGAAGTGCAACCTTCACATGA 1150
||| ||||| |||||||| ||||| || ||||||||||||||||||||||
fk12339 1012 CAACAACCGGTGTCTGGACGGGCAGCCGATGAAGTGCAACCTTCACATGA 1061
N N R C L D G Q P M K C N L H M N
1151 ----+----*----+----*----+----*----+----*----+----* 1200
G N V I T S D Q P I L L R L S D
msh29358 1151 ATGGAAATGTCATCACCTCAGACCAACCCATCCTGCTGCGGTTGAGTGAC 1200
|||| ||||| |||||||||||||| ||||||||||||||| ||||||||
fk12339 1062 ATGGGAATGTTATCACCTCAGACCAGCCCATCCTGCTGCGGCTGAGTGAC 1111
G N V I T S D Q P I L L R L S D
1201 ----+----*----+----*----+----*----+----*----+----* 1250
S P S V K K E S E L P R R G N P -
msh29358 1201 AGCCCCTCAGTGAAAAAGGAAAGCGAGCTGCCACGGAGGGGCAACCCTG. 1249
||||| ||| |||||||||| ||||||||||| || |||| ||| |||
fk12339 1112 AGCCCATCAATGAAAAAGGAGAGCGAGCTGCCTCGCAGGGTGAACTCTGC 1161
S P S M K K E S E L P R R V N S A
1251 ----+----*----+----*----+----*----+----*----+----* 1300
S S N P P A E V D P D T V L R A
msh29358 1250 ..CCTCTTCCAACCCTCCTGCCGAAGTGGACCCTGACACCGTTCTCAGAG 1297
|||| |||||||| |||||||||||||||||||||||| | || | |
fk12339 1162 CTCCTCCTCCAACCCCCCTGCCGAAGTGGACCCTGACACCATCCTGAAGG 1211
S S S N P P A E V D P D T I L K A
1301 ----+----*----+----*----+----*----+----*----+----* 1350
L F K S S G A S V T T Q P T E F
msh29358 1298 CGCTCTTCAAGTCCTCGGGGGCCTCTGTGACCACACAACCCACAGAATTC 1347
| |||||||||||||| ||||||||||||||||| || ||||||||||||
fk12339 1212 CACTCTTCAAGTCCTCAGGGGCCTCTGTGACCACGCAGCCCACAGAATTC 1261
L F K S S G A S V T T Q P T E F
1351 ----+----*----+----*----+----*----+----*----+----* 1400
K I K L *
msh29358 1348 AAAATCAAACTTTGAGGAGGGGAGCGAGGCAGCCAGAA.ACAGGGCAGAG 1396
|||||||| ||||||| ||||||| ||||||||||||| ||||||||
fk12339 1262 AAAATCAAGCTTTGAGCAGGGGAGTGAGGCAGCCAGAAGTGGGGGCAGAG 1311
K I K L *
1401 ----+----*----+----*----+----*----+----*----+----* 1450
msh29358 1397 GAGGGTGGCTCTGTTT.CCCAAGGCAAAG.TTGAGACCAATGGGCTGTCG 1444
|||||||||||||||| |||||||||||| || ||||||||||| |||
fk12339 1312 GAGGGTGGCTCTGTTTCCCCAAGGCAAAGCTTATGACCAATGGGCCATCG 1361
1451 ----+----*----+----*----+----*----+----*----+----* 1500
msh29358 1445 GACTGAAGCCCCCTGAACAAGGGATGAGGTACCAGGG....AGAGCTTCC 1490
||||| || ||||||| |||| | | | |||||| |||||||||
fk12339 1362 GACTGGAGACCCCTGATTGTGGGAAGGGTTGCCAGGGATAAAGAGCTTCC 1411
1501 ----+----*----+----*----+----*----+----*----+----* 1550
msh29358 1491 TCGCTGGACGGGACCCACCTTTCTGTGTTGTTTACACCTTGCCCTTCTGT 1540
|| ||||| ||||||| |||||||||||||| | | | |||
fk12339 1412 TCACTGGATGGGACCCGCCTTTCTGTGTTGTGTTCTGCCCTGTGCTCTTC 1461
1551 ----+----*----+----*----+----*----+----*----+----* 1600
msh29358 1541 GCGTTCCATTTCTGTAGTATGTTTCCTCTTTCCTCCATTCATCATCAAGG 1590
| | | || || ||| | |||| || ||||| |||||
fk12339 1462 TCTCTACGTTAACGTTTCCTGTAGTATGTTTCTTCATCTCATCGCCAAGG 1511
1601 ----+----*----+----*----+----*----+----*----+----* 1650
msh29358 1591 TAGGC...TGTGTTTGTCGGTGTGCCTCCCCTGCCCTCGGCCCCTAGCTG 1637
||||| ||| ||| |||||||||||| |||| ||||| |||||
fk12339 1512 TAGGCTTGTGTTTTTCAGTGTGTGCCTCCCCGAGCCTCAGCCCCAAGCTG 1561
1651 ----+----*----+----*----+----*----+----*----+----* 1700
msh29358 1638 ATTTCTCCCCTAGATATGGTGCACTG.TTTCCCTGGGTGGCCTTCTTGTG 1686
|||||| || || ||||| ||||| ||| ||||||||| ||||||||
fk12339 1562 ATTTCTTATCTGGAAATGGTACACTGAATTCTCTGGGTGGCTTTCTTGTG 1611
1701 ----+----*----+----*----+----*----+----*----+----* 1750
msh29358 1687 GCCCCATGGGCCACAGGGTGCAGGAACGTATTGGAAAGACTGCTTTTTTT 1736
|||||||||| ||| ||| || | | ||| |||
fk12339 1612 GCCCCATGGGATGCAGCGTGGGGG...CTGTCTGAAGGAC.......... 1648
1751 ----+----*----+----*----+----*----+----*----+----* 1800
msh29358 1737 TTTTTTTAATTTTTTTAAAATTTTTTTTATGTTTTGTTTTCAAGAGTTTT 1786
||||| | | | | |||
fk12339 1649 ................CCTGCTTTTTCCAGGGGCCGAGGGGCTGCCTTTC 1682
1801 ----+----*----+----*----+----*----+----*----+----* 1850
msh29358 1787 CTTGTTCTGTTGAAGTTTTCACACAAAACGGAATGAATGGGACCTCCTGC 1836
||| | ||| | || || | || ||| | |||| ||||
fk12339 1683 CTTTGTGTGTATTAAGCTTTTCAAACAATGGAGGGGATGGAGAGCCCTGG 1732
1851 ----+----*----+----*----+----*----+----*----+----* 1900
msh29358 1837 CATTCAG.TGAGCACTAGGACAGCTGGGACCTCCTGCCATTCAGTGAGCA 1885
| | | | | | ||| | || | |||| ||
fk12339 1733 TGTCCTGACGGGAGCCAGGTCGGCCTGAGAGCTGTGCCGCTC........ 1774
1901 ----+----*----+----*----+----*----+----*----+----* 1950
msh29358 1886 CTAGGACAGCTGGGACCTCCTGCCATTCAGTGAGCACTAGGACAGCTGGG 1935
|| | | | | |||| | ||| | | ||| || |
fk12339 1775 CTCTGTCTTGTCAGTGGAGGTGCC..TGGGTGGGGAGCAGG...TCTCAG 1819
1951 ----+----*----+----*----+----*----+----*----+----* 2000
msh29358 1936 ACCTCCTGCCAT....TCAGTGAGCACTAGGACAGCTGGGGGCTGCGTCA 1981
|||| || | | ||||| | | || | ||| | ||
fk12339 1820 GCCTCTTGTCCTCTCCCCAGTGGCTCCAGGCCTCACTAGTGGCAAGGGCA 1869
2001 ----+----*----+----*----+----*----+----*----+----* 2050
msh29358 1982 GGCT...ACTGGCTTCCTGTGTTCTCACCACTGTCCCTCTAGCCCTGACT 2028
|| | ||| ||| | | | |||| | | ||
fk12339 1870 GGATGAGGCTGCACCGCTGGGAAGAGTCTATCTAAGCTCTTGGCTTGGAG 1919
2051 ----+----*----+----*----+----*----+----*----+----* 2100
msh29358 2029 GCAAGTATGCAGTGCTGGATGACGGGCAGTGTGCAAGGCATCCCAGCATT 2078
| || | | | || || ||| | || || |
fk12339 1920 TCCCGTGTCGTCTCCACCCAGA..GGAAGTTCTCCAGAGTTCAC...... 1961
2101 ----+----*----+----*----+----*----+----*----+----* 2150
msh29358 2079 CATGGTCCCTTGTTAGTGTTGTGCCAAAGGCCTTGGGTCAGTTCTCTCAG 2128
| | | || | | ||||||| || ||| ||| |||||
fk12339 1962 CTTTCCCTTTTCCTTGAGTTGTGCTGAATGCCCCACCCCAGCTCTCT... 2008
2151 ----+----*----+----*----+----*----+----*----+----* 2200
msh29358 2129 CTTCCATATGGAAGT.....GAGGAAGGGACCTGTGCCTATTAGCCCTCT 2173
| || | ||| || || |||| ||||| | | |||||||
fk12339 2009 TTCCCTTCTGGGTGTCTTTGCTGGGAGGGGGCTGTG.TTGTGAGCCCTCC 2057
2201 ----+----*----+----*----+----*----+----*----+----* 2250
msh29358 2174 TGATTCTCACCTGATAGGGCA..ACATCAAAGCTTGGTGTGGGTGTGGGT 2221
| ||||||||| |||| | || | | |||| | |||| |
fk12339 2058 CGGTTCTCACCTCGCCTGGCACTTAACCACACCCTGGT.TTTGTGTAGCC 2106
2251 ----+----*----+----*----+----*----+----*----+----* 2300
msh29358 2222 GCCAGCTCCAAGTTGGCTGAGCCTTTTTCCAGGTTCTACCCGGGCGCCTC 2271
|||||||| ||| || |||||| ||| | |
fk12339 2107 GCCAGCTCTCTTCTGGTTGGGCCTTT............GAAAGGCTCAGC 2144
2301 ----+----*----+----*----+----*----+----*----+----* 2350
msh29358 2272 TGTGTGTTCTACAGCACAGAGGACTTCGGGGAGATTGATTGGATCAGAGC 2321
|| | ||| | || | | |||| |||| || |
fk12339 2145 CTCCCATTGTGCAGTGCTTGGGTTTGGAGCTTATTTGAATGGAAGAGGTC 2194
2351 ----+----*----+----*----+----*----+----*----+----* 2400
msh29358 2322 CATTGGCTGGCTCTGGCTCTGCTTTTCTGCCTTCAGTTATCTACAGAACA 2371
|| || |||||||| | |||||| | |||||| ||||||| |||
fk12339 2195 AGTT...TGTTCCTGGCTCTCCATTTCTGGCCTCAGTTGTCTACAGGACA 2241
2401 ----+----*----+----*----+----*----+----*----+----* 2450
msh29358 2372 G....CAGGTTTGCCTGAAG.......TGCAGCCTTCACCAGGG...... 2404
| |||| |||||| || | |||| ||||| ||
fk12339 2242 GTGGTCAGGGATGCCTGGAGGCATATATCCAGCTGCCACCAAGGGGCACT 2291
2451 ----+----*----+----*----+----*----+----*----+----* 2500
msh29358 2405 CATTGTCTCTGCTGGTGTCAGTGACCCACATTGATGAGTGGTCTGAGCAG 2454
|||| | || ||| |||||||| ||| || || | ||| |
fk12339 2292 GTTTGTTCCCACTTATGTGAGTGACCC.CATCCATCCATGACCAGAGGAT 2340
2501 ----+----*----+----*----+----*----+----*----+----* 2550
msh29358 2455 CTGGTGGGTTAC...................................... 2466
| | |
fk12339 2341 TATTTTCCTGCCTTGGCAGAGGAGGAGGAGTCAAGGGAGCAGGGCAGCTC 2390
2551 ----+----*----+----*----+----*----+----*----+----* 2600
msh29358 2467 ..............TTTACCCAGTGTGTTCCTGCATTGTTTAGTGTGGAA 2502
||| ||||| | | | ||| | |
fk12339 2391 TACCAGGCAAGGTGTTTCCCCAGCATAGGCGCAGACAGTTGGGACGAAAC 2440
2601 ----+----*----+----*----+----*----+----*----+----* 2650
msh29358 2503 CTGTGGGCAGGTGCCGAGTGTCAGATAGCATCGGTCCAGAGCTCGTCAGA 2552
| | || || | | | | || | | ||
fk12339 2441 TTCAGAGCCCAGGCAGTCCCTGAATGACCAGGCCAGTGTTGTCACTGAGT 2490
2651 ----+----*----+----*----+----*----+----*----+----* 2700
msh29358 2553 GGCCCCTGACAG...TGGAAACAGAAGATGCTAAGCTGTCATAGGTGGAG 2599
|| ||| | | ||| | ||| | | |||| || || |||||
fk12339 2491 GGTCCCCTGCTGGTTGGGAGTGAAGAGAATCCAGGCTGGCAGAGCTGGAG 2540
2701 ----+----*----+----*----+----*----+----*----+----* 2750
msh29358 2600 CAGGATCCTAAGGACG.............CACAATATCAGTTGTGCGTGC 2636
| | | || ||| ||| |||||| | ||||
fk12339 2541 CCAGTTGGGGAGCACGGTTCTGGGAGCTCTGCAAAATCAGTAGCAAGTGC 2590
2751 ----+----*----+----*----+----*----+----*----+----* 2800
msh29358 2637 T.GTAAAGGGACAAACCGAGGAAGTAGAGGAAGCTGCGGCACTGTGACCC 2685
| | ||||| ||| |||| || | || | | ||
fk12339 2591 TGGAAAAGGCACATGCCGAAGATACTCAAGA......GCTCCCAAGATTT 2634
2801 ----+----*----+----*----+----*----+----*----+----* 2850
msh29358 2686 ATTCAAGGCTAGCACAGTTAAGAGAACTTCAGCTAATTCTTATTTTCCTG 2735
| |||||||| |||| || | ||| || | || | ||| | |
fk12339 2635 GCTTGAGGCTAGCCCAGTGAAAAAAACCAGAG...ACTCATGTTTCCAGG 2681
2851 ----+----*----+----*----+----*----+----*----+----* 2900
msh29358 2736 AGTTAGATCCCAGCCCATGCCCAGCTGGAAGGGTC...TCTTTTGGGTCA 2782
|| || || | || |||||| | ||| ||
fk12339 2682 GGTCAG.........TCTGTCAGGCAGGAAGGACCCAGGATTTGAACCCA 2722
2901 ----+----*----+----*----+----*----+----*----+----* 2950
msh29358 2783 AAATCAGTCCTTCAGCTCTAAGGTTGCCCAGCAAAGGAA...TCTAGGAA 2829
||||| ||||| ||| ||||||| | |||| | |||||
fk12339 2723 GCTTCAGTGTGCAGGCTCTGAGGCTGCCCAGGACGGGAAAGTCCAAGGAA 2772
2951 ----+----*----+----*----+----*----+----*----+----* 3000
msh29358 2830 TGACAACTGCGGTG.TCCAC.......TCCTAAACACCTCCTTCTCTT.. 2869
| | |||| ||||| || | || | || || ||
fk12339 2773 GGGGCCTGGTGGTGCTCCACTTGCAGTTCTTTAAAGAATGCTGCTTTTTA 2822
3001 ----+----*----+----*----+----*----+----*----+----* 3050
msh29358 2870 ......ACACCCTTCGAAATGGGTACAAACTTAATTCTTCTCAGAAACTG 2913
|||||| || ||||| || || |||| | || | |||
fk12339 2823 TTCTCCTAACCCTTTCAAGTGGGTGCAGAC....TTCTCGTTAGCAGCTG 2868
3051 ----+----*----+----*----+----*----+----*----+----* 3100
msh29358 2914 GAAGACATTCCT.CTGTGTTTGCCCCTTCCTGACCCAAGAGACACCCTAT 2962
|||||||||||| | || ||||||||| ||||||||| | |
fk12339 2869 GAAGACATTCCTCCCACACTTTTCCCTTCCTGGCCCAAGAGAGCATCCAG 2918
3101 ----+----*----+----*----+----*----+----*----+----* 3150
msh29358 2963 A...CATGAGGGCCCAGCTCTTTACCT.CTGGGGACAGCTGGCATGCCTT 3008
| || ||| || | | || | | ||||| | | ||| |
fk12339 2919 AAGGCAGTAGGACCTGGTTTTTCAGGTACTGGGAGCCGGGGGCTCACTGC 2968
3151 ----+----*----+----*----+----*----+----*----+----* 3200
msh29358 3009 TGGCTTTGTGTAGAGTAGGGTGGTGAGACCCTTCCTGGCTCCCCTGCTTT 3058
| || |||| || | | || | |||| || | |||||
fk12339 2969 TTGCACTGTGCTTAGGGTAGGGATGGTAAATATCCTCCCTGCATGGCTTT 3018
3201 ----+----*----+----*----+----*----+----*----+----* 3250
msh29358 3059 GT.........................................GAGTT.. 3065
| |||||
fk12339 3019 ATCCTCCCTCTCATCCCAAAGCAGGTATCTTCTGGTTGTCACAGAGTTTC 3068
3251 ----+----*----+----*----+----*----+----*----+----* 3300
msh29358 3066 .AGGCGTGCTGGGGCACCCTCCTGGCCAGGTGG................. 3097
| || | | ||| || | |||||| |||
fk12339 3069 ATTGAGTCCAGCTGCAGCCACGTGGCCATCTGGAGCTGGTGCTATAGGTG 3118
3301 ----+----*----+----*----+----*----+----*----+----* 3350
msh29358 3098 ...........TACTTTGGGGACTTGGGTGTTTGCATCATAAT....... 3129
| | |||||| || || | | || |
fk12339 3119 ACCATCTGGTACATTGAGGGGACCTGTTTGCCTCCTCCACTCTATAAGCA 3168
3351 ----+----*----+----*----+----*----+----*----+----* 3400
msh29358 3130 GTCATCTTGGGAAAC.....AGAAAAGAAGGTGGGCCAACCCTCATGTCC 3174
|||||||||||| || || ||| ||||||| | ||| |||||
fk12339 3169 GTCATCTTGGGAGACCGGGAGGAGAAGGTGGTGGGCTAGTCCT.GTGTCC 3217
3401 ----+----*----+----*----+----*----+----*----+----* 3450
msh29358 3175 CCCACTCCCTTGCATTATT............TCTTTGTGTCTTGTTCAGG 3212
|| | | | ||| | ||| ||| || ||| |||
fk12339 3218 TCCTCCACTTCCCATGCCTCTATGTTACCCATCTGTGTCTCCTGTGCAGA 3267
3451 ----+----*----+----*----+----*----+----*----+----* 3500
msh29358 3213 AGAAAAGAGGGCCTTGTTA..........................CTTTC 3236
|| | || | ||| | ||
fk12339 3268 AGGAGAGGAAGGGGCATTAAGAGATGAAGGGTGATTATGTATTACTTATC 3317
3501 ----+----*----+----*----+--- 3528
msh29358 3237 CACTTCTCAATAAATGTTTGTTATTCCT 3264
|| |||| |||||| ||||||||||||
fk12339 3318 CATTTCTGAATAAACATTTGTTATTCCT 3345