# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/msh25292.fasta.nr -Q ../query/mKIAA0129.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0129, 453 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7917873 sequences Expectation_n fit: rho(ln(x))= 4.9963+/-0.000184; mu= 12.8336+/- 0.010 mean_var=74.9265+/-14.407, 0's: 35 Z-trim: 59 B-trim: 5 in 1/65 Lambda= 0.148169 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|148670418|gb|EDL02365.1| tripartite motif-conta ( 461) 3137 679.8 3.8e-193 gi|56404888|sp|Q8BVW3.2|TRI14_MOUSE RecName: Full= ( 440) 3048 660.7 2e-187 gi|74223362|dbj|BAE21564.1| unnamed protein produc ( 434) 3010 652.6 5.5e-185 gi|187469600|gb|AAI66777.1| Trim14 protein [Rattus ( 440) 2742 595.3 9.7e-168 gi|114625785|ref|XP_520143.2| PREDICTED: tripartit ( 442) 2346 510.7 3e-142 gi|20141957|sp|Q14142.2|TRI14_HUMAN RecName: Full= ( 442) 2346 510.7 3e-142 gi|119579279|gb|EAW58875.1| tripartite motif-conta ( 440) 2331 507.5 2.7e-141 gi|109110842|ref|XP_001113460.1| PREDICTED: simila ( 442) 2310 503.0 6.1e-140 gi|73971864|ref|XP_854943.1| PREDICTED: similar to ( 449) 2048 447.0 4.5e-123 gi|194669532|ref|XP_600917.4| PREDICTED: similar t ( 508) 2043 446.0 1e-122 gi|74182456|dbj|BAE42853.1| unnamed protein produc ( 285) 1986 433.6 3.1e-119 gi|119579276|gb|EAW58872.1| tripartite motif-conta ( 349) 1886 412.3 9.9e-113 gi|122890246|emb|CAM13793.1| tripartite motif-cont ( 283) 1770 387.4 2.5e-105 gi|12857367|dbj|BAB30988.1| unnamed protein produc ( 283) 1765 386.3 5.2e-105 gi|126335087|ref|XP_001363592.1| PREDICTED: simila ( 496) 1728 378.6 1.9e-102 gi|119579278|gb|EAW58874.1| tripartite motif-conta ( 321) 1594 349.8 5.7e-94 gi|74221940|dbj|BAE28672.1| unnamed protein produc ( 246) 1581 346.9 3.2e-93 gi|224088436|ref|XP_002187225.1| PREDICTED: tripar ( 434) 1449 318.9 1.5e-84 gi|53135098|emb|CAG32395.1| hypothetical protein [ ( 433) 1403 309.1 1.4e-81 gi|148670419|gb|EDL02366.1| tripartite motif-conta ( 377) 1276 281.9 1.9e-73 gi|149740425|ref|XP_001495145.1| PREDICTED: simila ( 276) 1257 277.7 2.5e-72 gi|194382508|dbj|BAG64424.1| unnamed protein produ ( 220) 1255 277.2 2.8e-72 gi|221046316|dbj|BAH14835.1| unnamed protein produ ( 223) 1254 277.0 3.3e-72 gi|26345272|dbj|BAC36286.1| unnamed protein produc ( 178) 1208 267.1 2.5e-69 gi|149045844|gb|EDL98844.1| tripartite motif prote ( 377) 1196 264.8 2.6e-68 gi|149635351|ref|XP_001506795.1| PREDICTED: hypoth ( 362) 1127 250.0 7e-64 gi|12407431|gb|AAG53504.1|AF220131_1 tripartite mo ( 253) 1080 239.8 5.7e-61 gi|119579275|gb|EAW58871.1| tripartite motif-conta ( 160) 620 141.3 1.6e-31 gi|117557997|gb|AAI25769.1| LOC100136946 protein [ ( 539) 524 121.3 6e-25 gi|189529380|ref|XP_001920401.1| PREDICTED: simila ( 512) 523 121.0 6.7e-25 gi|21757258|dbj|BAC05071.1| unnamed protein produc ( 222) 515 119.0 1.2e-24 gi|122891019|emb|CAM13155.1| novel protein (id:ibd ( 573) 517 119.8 1.8e-24 gi|115313297|gb|AAI24300.1| Si:dkey-252h13.6 [Dani ( 573) 511 118.5 4.3e-24 gi|189528205|ref|XP_001921089.1| PREDICTED: hypoth ( 589) 471 110.0 1.6e-21 gi|160773486|gb|AAI55347.1| LOC568734 protein [Dan ( 591) 468 109.3 2.6e-21 gi|118099645|ref|XP_415625.2| PREDICTED: similar t ( 531) 453 106.1 2.2e-20 gi|47217647|emb|CAG03044.1| unnamed protein produc ( 579) 450 105.5 3.6e-20 gi|149425442|ref|XP_001509110.1| PREDICTED: simila ( 924) 450 105.7 5.2e-20 gi|126309460|ref|XP_001374088.1| PREDICTED: simila ( 537) 442 103.8 1.1e-19 gi|47223774|emb|CAF98544.1| unnamed protein produc ( 360) 427 100.4 7.8e-19 gi|194217719|ref|XP_001918420.1| PREDICTED: simila ( 558) 423 99.7 1.9e-18 gi|209155654|gb|ACI34059.1| Tripartite motif-conta ( 561) 422 99.5 2.3e-18 gi|73956072|ref|XP_546637.2| PREDICTED: similar to ( 549) 420 99.1 3e-18 gi|157423248|gb|AAI53352.1| LOC100127579 protein [ ( 481) 418 98.6 3.6e-18 gi|49257644|gb|AAH74300.1| MGC84103 protein [Xenop ( 563) 417 98.4 4.7e-18 gi|58761176|gb|AAW82328.1| TRIM41 [Gallus gallus] ( 589) 417 98.4 4.9e-18 gi|169730360|gb|ACA64761.1| tripartite motif prote ( 627) 417 98.5 5.1e-18 gi|31127252|gb|AAH52821.1| Trim16 protein [Mus mus ( 469) 414 97.7 6.5e-18 gi|148678425|gb|EDL10372.1| tripartite motif prote ( 557) 414 97.8 7.3e-18 gi|56206982|emb|CAI25655.1| tripartite motif prote ( 469) 413 97.5 7.5e-18 >>gi|148670418|gb|EDL02365.1| tripartite motif-containin (461 aa) initn: 3137 init1: 3137 opt: 3137 Z-score: 3623.8 bits: 679.8 E(): 3.8e-193 Smith-Waterman score: 3137; 100.000% identity (100.000% similar) in 453 aa overlap (1-453:9-461) 10 20 30 40 50 mKIAA0 PTTLHREQRLPLRMASETTEARAPFQPDGAYGWRCPEHSERPAELFCRRCGR :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 FRFLHQPNPTTLHREQRLPLRMASETTEARAPFQPDGAYGWRCPEHSERPAELFCRRCGR 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA0 CVCALCPVLGAHRGHPVGLAEEEAVRVQKLIQDCLECLATKKRQHADNIAHLEDAGERLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 CVCALCPVLGAHRGHPVGLAEEEAVRVQKLIQDCLECLATKKRQHADNIAHLEDAGERLK 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA0 VYADSSKAWLTQKFTELRLLLDEEEVLAKKFIDKSTQLTLQVYREQAETCGKQIEVMDDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VYADSSKAWLTQKFTELRLLLDEEEVLAKKFIDKSTQLTLQVYREQAETCGKQIEVMDDF 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA0 STRVWGIGQEPNPVQLLQAYIATKTEMGQQMSPSELSHPVPLSFEPVKNFFKEFVEAIGN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 STRVWGIGQEPNPVQLLQAYIATKTEMGQQMSPSELSHPVPLSFEPVKNFFKEFVEAIGN 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA0 TLQTPMDTRLKENINCQLSNSSSTKPGALLKTSPSPERALFLKYARTPTLDPDTMHARLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 TLQTPMDTRLKENINCQLSNSSSTKPGALLKTSPSPERALFLKYARTPTLDPDTMHARLR 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA0 LSPDGLTVRCSLLGRLGPRPAPRFDALRQVLGRDGFAAGRHYWEVDVQEAGVGWWVGAAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LSPDGLTVRCSLLGRLGPRPAPRFDALRQVLGRDGFAAGRHYWEVDVQEAGVGWWVGAAY 310 320 330 340 350 360 360 370 380 390 400 410 mKIAA0 PSLRRRGASAAARLGCNRESWCVKRYDLEYWAFHDGQRSRLRPRRDPHRLGVFLDYEAGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PSLRRRGASAAARLGCNRESWCVKRYDLEYWAFHDGQRSRLRPRRDPHRLGVFLDYEAGI 370 380 390 400 410 420 420 430 440 450 mKIAA0 LAFYDVAGGMSHLHTFHAAFQEPLYPALRLWEGPISIPRLP ::::::::::::::::::::::::::::::::::::::::: gi|148 LAFYDVAGGMSHLHTFHAAFQEPLYPALRLWEGPISIPRLP 430 440 450 460 >>gi|56404888|sp|Q8BVW3.2|TRI14_MOUSE RecName: Full=Trip (440 aa) initn: 3048 init1: 3048 opt: 3048 Z-score: 3521.3 bits: 660.7 E(): 2e-187 Smith-Waterman score: 3048; 100.000% identity (100.000% similar) in 440 aa overlap (14-453:1-440) 10 20 30 40 50 60 mKIAA0 PTTLHREQRLPLRMASETTEARAPFQPDGAYGWRCPEHSERPAELFCRRCGRCVCALCPV ::::::::::::::::::::::::::::::::::::::::::::::: gi|564 MASETTEARAPFQPDGAYGWRCPEHSERPAELFCRRCGRCVCALCPV 10 20 30 40 70 80 90 100 110 120 mKIAA0 LGAHRGHPVGLAEEEAVRVQKLIQDCLECLATKKRQHADNIAHLEDAGERLKVYADSSKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|564 LGAHRGHPVGLAEEEAVRVQKLIQDCLECLATKKRQHADNIAHLEDAGERLKVYADSSKA 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA0 WLTQKFTELRLLLDEEEVLAKKFIDKSTQLTLQVYREQAETCGKQIEVMDDFSTRVWGIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|564 WLTQKFTELRLLLDEEEVLAKKFIDKSTQLTLQVYREQAETCGKQIEVMDDFSTRVWGIG 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA0 QEPNPVQLLQAYIATKTEMGQQMSPSELSHPVPLSFEPVKNFFKEFVEAIGNTLQTPMDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|564 QEPNPVQLLQAYIATKTEMGQQMSPSELSHPVPLSFEPVKNFFKEFVEAIGNTLQTPMDT 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA0 RLKENINCQLSNSSSTKPGALLKTSPSPERALFLKYARTPTLDPDTMHARLRLSPDGLTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|564 RLKENINCQLSNSSSTKPGALLKTSPSPERALFLKYARTPTLDPDTMHARLRLSPDGLTV 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA0 RCSLLGRLGPRPAPRFDALRQVLGRDGFAAGRHYWEVDVQEAGVGWWVGAAYPSLRRRGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|564 RCSLLGRLGPRPAPRFDALRQVLGRDGFAAGRHYWEVDVQEAGVGWWVGAAYPSLRRRGA 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA0 SAAARLGCNRESWCVKRYDLEYWAFHDGQRSRLRPRRDPHRLGVFLDYEAGILAFYDVAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|564 SAAARLGCNRESWCVKRYDLEYWAFHDGQRSRLRPRRDPHRLGVFLDYEAGILAFYDVAG 350 360 370 380 390 400 430 440 450 mKIAA0 GMSHLHTFHAAFQEPLYPALRLWEGPISIPRLP ::::::::::::::::::::::::::::::::: gi|564 GMSHLHTFHAAFQEPLYPALRLWEGPISIPRLP 410 420 430 440 >>gi|74223362|dbj|BAE21564.1| unnamed protein product [M (434 aa) initn: 3010 init1: 3010 opt: 3010 Z-score: 3477.5 bits: 652.6 E(): 5.5e-185 Smith-Waterman score: 3010; 99.770% identity (100.000% similar) in 434 aa overlap (20-453:1-434) 10 20 30 40 50 60 mKIAA0 PTTLHREQRLPLRMASETTEARAPFQPDGAYGWRCPEHSERPAELFCRRCGRCVCALCPV ::::::::::::::::::::::::::::::::::::::::: gi|742 EARAPFQPDGAYGWRCPEHSERPAELFCRRCGRCVCALCPV 10 20 30 40 70 80 90 100 110 120 mKIAA0 LGAHRGHPVGLAEEEAVRVQKLIQDCLECLATKKRQHADNIAHLEDAGERLKVYADSSKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 LGAHRGHPVGLAEEEAVRVQKLIQDCLECLATKKRQHADNIAHLEDAGERLKVYADSSKA 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA0 WLTQKFTELRLLLDEEEVLAKKFIDKSTQLTLQVYREQAETCGKQIEVMDDFSTRVWGIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 WLTQKFTELRLLLDEEEVLAKKFIDKSTQLTLQVYREQAETCGKQIEVMDDFSTRVWGIG 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA0 QEPNPVQLLQAYIATKTEMGQQMSPSELSHPVPLSFEPVKNFFKEFVEAIGNTLQTPMDT ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::: gi|742 QEPNPVQLLQAYIATKTEMGQQMSPSELGHPVPLSFEPVKNFFKEFVEAIGNTLQTPMDT 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA0 RLKENINCQLSNSSSTKPGALLKTSPSPERALFLKYARTPTLDPDTMHARLRLSPDGLTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 RLKENINCQLSNSSSTKPGALLKTSPSPERALFLKYARTPTLDPDTMHARLRLSPDGLTV 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA0 RCSLLGRLGPRPAPRFDALRQVLGRDGFAAGRHYWEVDVQEAGVGWWVGAAYPSLRRRGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 RCSLLGRLGPRPAPRFDALRQVLGRDGFAAGRHYWEVDVQEAGVGWWVGAAYPSLRRRGA 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA0 SAAARLGCNRESWCVKRYDLEYWAFHDGQRSRLRPRRDPHRLGVFLDYEAGILAFYDVAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 SAAARLGCNRESWCVKRYDLEYWAFHDGQRSRLRPRRDPHRLGVFLDYEAGILAFYDVAG 350 360 370 380 390 400 430 440 450 mKIAA0 GMSHLHTFHAAFQEPLYPALRLWEGPISIPRLP ::::::::::::::::::::::::::::::::: gi|742 GMSHLHTFHAAFQEPLYPALRLWEGPISIPRLP 410 420 430 >>gi|187469600|gb|AAI66777.1| Trim14 protein [Rattus nor (440 aa) initn: 2742 init1: 2742 opt: 2742 Z-score: 3167.8 bits: 595.3 E(): 9.7e-168 Smith-Waterman score: 2742; 90.455% identity (96.364% similar) in 440 aa overlap (14-453:1-440) 10 20 30 40 50 60 mKIAA0 PTTLHREQRLPLRMASETTEARAPFQPDGAYGWRCPEHSERPAELFCRRCGRCVCALCPV ::: :.:.::: : : . :::::::::::::::::::.::::::::: gi|187 MASGTAEVRAPVQSDWTGGWRCPEHSERPAELFCRRCSRCVCALCPV 10 20 30 40 70 80 90 100 110 120 mKIAA0 LGAHRGHPVGLAEEEAVRVQKLIQDCLECLATKKRQHADNIAHLEDAGERLKVYADSSKA ::::::::::::::::.:.:::.:.:::::::::::::::::.:::.:::::: :::::: gi|187 LGAHRGHPVGLAEEEAARAQKLMQECLECLATKKRQHADNIAQLEDTGERLKVSADSSKA 50 60 70 80 90 100 130 140 150 160 170 180 mKIAA0 WLTQKFTELRLLLDEEEVLAKKFIDKSTQLTLQVYREQAETCGKQIEVMDDFSTRVWGIG :::::::::::::::::.:::.::::.::::::::.::::.: ::::::.::: ::: :. gi|187 WLTQKFTELRLLLDEEEALAKSFIDKNTQLTLQVYQEQAESCRKQIEVMSDFSIRVWDIS 110 120 130 140 150 160 190 200 210 220 230 240 mKIAA0 QEPNPVQLLQAYIATKTEMGQQMSPSELSHPVPLSFEPVKNFFKEFVEAIGNTLQTPMDT : :::::::::::::.::::::::::::::::::::::::::::::::: ::::::::: gi|187 QVSNPVQLLQAYIATKAEMGQQMSPSELSHPVPLSFEPVKNFFKEFVEAIRNTLQTPMDT 170 180 190 200 210 220 250 260 270 280 290 300 mKIAA0 RLKENINCQLSNSSSTKPGALLKTSPSPERALFLKYARTPTLDPDTMHARLRLSPDGLTV :::::::::::.:::::::::::::::::::::::::::::::::::::::::: ::::: gi|187 RLKENINCQLSSSSSTKPGALLKTSPSPERALFLKYARTPTLDPDTMHARLRLSTDGLTV 230 240 250 260 270 280 310 320 330 340 350 360 mKIAA0 RCSLLGRLGPRPAPRFDALRQVLGRDGFAAGRHYWEVDVQEAGVGWWVGAAYPSLRRRGA :::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::. gi|187 RCSLLGRLGPRPAPRFDSLRQVLGRDGFAAGRHYWEVDVQEAGVGWWVGAAYPSLRRRGT 290 300 310 320 330 340 370 380 390 400 410 420 mKIAA0 SAAARLGCNRESWCVKRYDLEYWAFHDGQRSRLRPRRDPHRLGVFLDYEAGILAFYDVAG :.:::::::::::::::::.::::::: :::::: ::::::::::::::::::.:::::: gi|187 STAARLGCNRESWCVKRYDMEYWAFHDCQRSRLRLRRDPHRLGVFLDYEAGILTFYDVAG 350 360 370 380 390 400 430 440 450 mKIAA0 GMSHLHTFHAAFQEPLYPALRLWEGPISIPRLP ::::::::.:.:::::::::::::: ::::::: gi|187 GMSHLHTFYAVFQEPLYPALRLWEGTISIPRLP 410 420 430 440 >>gi|114625785|ref|XP_520143.2| PREDICTED: tripartite mo (442 aa) initn: 2343 init1: 2343 opt: 2346 Z-score: 2710.3 bits: 510.7 E(): 3e-142 Smith-Waterman score: 2346; 77.376% identity (90.045% similar) in 442 aa overlap (14-453:1-442) 10 20 30 40 50 mKIAA0 PTTLHREQRLPLRMASETTEARAPFQPDGAY--GWRCPEHSERPAELFCRRCGRCVCALC ::. .. .:.: . . . :::::::..: :::::::: ::::::: gi|114 MAGAAAGTRTPGRSELVERCGWRCPEHGDRVAELFCRRCRRCVCALC 10 20 30 40 60 70 80 90 100 110 mKIAA0 PVLGAHRGHPVGLAEEEAVRVQKLIQDCLECLATKKRQHADNIAHLEDAGERLKVYADSS :::::::::::::: : ::.:::: :.::. :: ::.::.:::...::: :.::. :.:: gi|114 PVLGAHRGHPVGLALEAAVHVQKLSQECLKQLAIKKQQHVDNITQIEDATEKLKANAESS 50 60 70 80 90 100 120 130 140 150 160 170 mKIAA0 KAWLTQKFTELRLLLDEEEVLAKKFIDKSTQLTLQVYREQAETCGKQIEVMDDFSTRVWG :.:: :::::::::::::.::::::::.::::::::::::..: .:..::.:.:.:::. gi|114 KTWLKGKFTELRLLLDEEEALAKKFIDKNTQLTLQVYREQADSCREQLDVMNDLSNRVWS 110 120 130 140 150 160 180 190 200 210 220 230 mKIAA0 IGQEPNPVQLLQAYIATKTEMGQQMSPSELSHPVPLSFEPVKNFFKEFVEAIGNTLQTPM :::::.::: :::: ::. :: :::: .:: :::::::::::.::: .:::. . :: :. gi|114 IGQEPDPVQRLQAYTATEQEMQQQMSLGELCHPVPLSFEPVKSFFKSLVEAVESILQMPL 170 180 190 200 210 220 240 250 260 270 280 290 mKIAA0 DTRLKENINCQLSNSSSTKPGALLKTSPSPERALFLKYARTPTLDPDTMHARLRLSPDGL : ::::.::::::. ::::::.::::::::.:.:.::::::::::::::::::::: : : gi|114 DIRLKESINCQLSDPSSTKPGTLLKTSPSPQRSLLLKYARTPTLDPDTMHARLRLSADRL 230 240 250 260 270 280 300 310 320 330 340 350 mKIAA0 TVRCSLLGRLGPRPAPRFDALRQVLGRDGFAAGRHYWEVDVQEAGVGWWVGAAYPSLRRR ::::.::: ::: :: ::::: :::.:: ::::::::::::::::.:::::::: ::::: gi|114 TVRCGLLGSLGPVPALRFDALWQVLARDCFAAGRHYWEVDVQEAGAGWWVGAAYASLRRR 290 300 310 320 330 340 360 370 380 390 400 410 mKIAA0 GASAAARLGCNRESWCVKRYDLEYWAFHDGQRSRLRPRRDPHRLGVFLDYEAGILAFYDV ::::::::::::.:::.::::::::::::::::::::: : :::::::::::.:::::: gi|114 GASAAARLGCNRQSWCLKRYDLEYWAFHDGQRSRLRPRDDLDRLGVFLDYEAGVLAFYDV 350 360 370 380 390 400 420 430 440 450 mKIAA0 AGGMSHLHTFHAAFQEPLYPALRLWEGPISIPRLP .:::::::::.:.:::::::::::::: ::::::: gi|114 TGGMSHLHTFRATFQEPLYPALRLWEGAISIPRLP 410 420 430 440 >>gi|20141957|sp|Q14142.2|TRI14_HUMAN RecName: Full=Trip (442 aa) initn: 2337 init1: 2337 opt: 2346 Z-score: 2710.3 bits: 510.7 E(): 3e-142 Smith-Waterman score: 2346; 77.376% identity (90.271% similar) in 442 aa overlap (14-453:1-442) 10 20 30 40 50 mKIAA0 PTTLHREQRLPLRMASETTEARAPFQPDGAYG--WRCPEHSERPAELFCRRCGRCVCALC ::. .: .:.: . . . : ::::::..: :::::::: ::::::: gi|201 MAGAATGSRTPGRSELVEGCGWRCPEHGDRVAELFCRRCRRCVCALC 10 20 30 40 60 70 80 90 100 110 mKIAA0 PVLGAHRGHPVGLAEEEAVRVQKLIQDCLECLATKKRQHADNIAHLEDAGERLKVYADSS :::::::::::::: : ::.:::: :.::. :: ::.:: :::...::: :.::. :.:: gi|201 PVLGAHRGHPVGLALEAAVHVQKLSQECLKQLAIKKQQHIDNITQIEDATEKLKANAESS 50 60 70 80 90 100 120 130 140 150 160 170 mKIAA0 KAWLTQKFTELRLLLDEEEVLAKKFIDKSTQLTLQVYREQAETCGKQIEVMDDFSTRVWG :.:: :::::::::::::.::::::::.::::::::::::..: .:...:.:.:.:::. gi|201 KTWLKGKFTELRLLLDEEEALAKKFIDKNTQLTLQVYREQADSCREQLDIMNDLSNRVWS 110 120 130 140 150 160 180 190 200 210 220 230 mKIAA0 IGQEPNPVQLLQAYIATKTEMGQQMSPSELSHPVPLSFEPVKNFFKEFVEAIGNTLQTPM :.:::.::: :::: ::. :: :::: .:: :::::::::::.::: .:::. .:::::. gi|201 ISQEPDPVQRLQAYTATEQEMQQQMSLGELCHPVPLSFEPVKSFFKGLVEAVESTLQTPL 170 180 190 200 210 220 240 250 260 270 280 290 mKIAA0 DTRLKENINCQLSNSSSTKPGALLKTSPSPERALFLKYARTPTLDPDTMHARLRLSPDGL : ::::.::::::. ::::::.::::::::::.:.::::::::::::::::::::: : : gi|201 DIRLKESINCQLSDPSSTKPGTLLKTSPSPERSLLLKYARTPTLDPDTMHARLRLSADRL 230 240 250 260 270 280 300 310 320 330 340 350 mKIAA0 TVRCSLLGRLGPRPAPRFDALRQVLGRDGFAAGRHYWEVDVQEAGVGWWVGAAYPSLRRR ::::.::: ::: :. ::::: :::.:: ::.:::::::::::::.:::::::: ::::: gi|201 TVRCGLLGSLGPVPVLRFDALWQVLARDCFATGRHYWEVDVQEAGAGWWVGAAYASLRRR 290 300 310 320 330 340 360 370 380 390 400 410 mKIAA0 GASAAARLGCNRESWCVKRYDLEYWAFHDGQRSRLRPRRDPHRLGVFLDYEAGILAFYDV ::::::::::::.:::.::::::::::::::::::::: : :::::::::::.:::::: gi|201 GASAAARLGCNRQSWCLKRYDLEYWAFHDGQRSRLRPRDDLDRLGVFLDYEAGVLAFYDV 350 360 370 380 390 400 420 430 440 450 mKIAA0 AGGMSHLHTFHAAFQEPLYPALRLWEGPISIPRLP .:::::::::.:.:::::::::::::: ::::::: gi|201 TGGMSHLHTFRATFQEPLYPALRLWEGAISIPRLP 410 420 430 440 >>gi|119579279|gb|EAW58875.1| tripartite motif-containin (440 aa) initn: 1888 init1: 1888 opt: 2331 Z-score: 2693.0 bits: 507.5 E(): 2.7e-141 Smith-Waterman score: 2331; 77.376% identity (89.819% similar) in 442 aa overlap (14-453:1-440) 10 20 30 40 50 mKIAA0 PTTLHREQRLPLRMASETTEARAPFQPDGAYG--WRCPEHSERPAELFCRRCGRCVCALC ::. .: .:.: . . . : ::::::..: :::::::: ::::::: gi|119 MAGAATGSRTPGRSELVEGCGWRCPEHGDRVAELFCRRCRRCVCALC 10 20 30 40 60 70 80 90 100 110 mKIAA0 PVLGAHRGHPVGLAEEEAVRVQKLIQDCLECLATKKRQHADNIAHLEDAGERLKVYADSS :::::::::::::: : ::.:::: :.::. :: ::.:: :::...::: :.:: : :: gi|119 PVLGAHRGHPVGLALEAAVHVQKLSQECLKQLAIKKQQHIDNITQIEDATEKLK--AKSS 50 60 70 80 90 100 120 130 140 150 160 170 mKIAA0 KAWLTQKFTELRLLLDEEEVLAKKFIDKSTQLTLQVYREQAETCGKQIEVMDDFSTRVWG :.:: :::::::::::::.::::::::.::::::::::::..: .:...:.:.:.:::. gi|119 KTWLKGKFTELRLLLDEEEALAKKFIDKNTQLTLQVYREQADSCREQLDIMNDLSNRVWS 110 120 130 140 150 160 180 190 200 210 220 230 mKIAA0 IGQEPNPVQLLQAYIATKTEMGQQMSPSELSHPVPLSFEPVKNFFKEFVEAIGNTLQTPM :.:::.::: :::: ::. :: :::: .:: :::::::::::.::: .:::. .:::::. gi|119 ISQEPDPVQRLQAYTATEQEMQQQMSLGELCHPVPLSFEPVKSFFKGLVEAVESTLQTPL 170 180 190 200 210 220 240 250 260 270 280 290 mKIAA0 DTRLKENINCQLSNSSSTKPGALLKTSPSPERALFLKYARTPTLDPDTMHARLRLSPDGL : ::::.::::::. ::::::.::::::::::.:.::::::::::::::::::::: : : gi|119 DIRLKESINCQLSDPSSTKPGTLLKTSPSPERSLLLKYARTPTLDPDTMHARLRLSADRL 230 240 250 260 270 280 300 310 320 330 340 350 mKIAA0 TVRCSLLGRLGPRPAPRFDALRQVLGRDGFAAGRHYWEVDVQEAGVGWWVGAAYPSLRRR ::::.::: ::: :. ::::: :::.:: ::.:::::::::::::.:::::::: ::::: gi|119 TVRCGLLGSLGPVPVLRFDALWQVLARDCFATGRHYWEVDVQEAGAGWWVGAAYASLRRR 290 300 310 320 330 340 360 370 380 390 400 410 mKIAA0 GASAAARLGCNRESWCVKRYDLEYWAFHDGQRSRLRPRRDPHRLGVFLDYEAGILAFYDV ::::::::::::.:::.::::::::::::::::::::: : :::::::::::.:::::: gi|119 GASAAARLGCNRQSWCLKRYDLEYWAFHDGQRSRLRPRDDLDRLGVFLDYEAGVLAFYDV 350 360 370 380 390 400 420 430 440 450 mKIAA0 AGGMSHLHTFHAAFQEPLYPALRLWEGPISIPRLP .:::::::::.:.:::::::::::::: ::::::: gi|119 TGGMSHLHTFRATFQEPLYPALRLWEGAISIPRLP 410 420 430 440 >>gi|109110842|ref|XP_001113460.1| PREDICTED: similar to (442 aa) initn: 2307 init1: 2307 opt: 2310 Z-score: 2668.7 bits: 503.0 E(): 6.1e-140 Smith-Waterman score: 2310; 76.471% identity (89.593% similar) in 442 aa overlap (14-453:1-442) 10 20 30 40 50 mKIAA0 PTTLHREQRLPLRMASETTEARAPFQPDGAYG--WRCPEHSERPAELFCRRCGRCVCALC ::. .. .:.: . . : ::::::..: :::::::: ::::::: gi|109 MAGAAASSRTPGGSELVEGCGWRCPEHGDRIAELFCRRCHRCVCALC 10 20 30 40 60 70 80 90 100 110 mKIAA0 PVLGAHRGHPVGLAEEEAVRVQKLIQDCLECLATKKRQHADNIAHLEDAGERLKVYADSS :::::::::::::: : ::.:::: :.::. :: ::.::.:::...::: :.::: :.:: gi|109 PVLGAHRGHPVGLALEAAVHVQKLSQECLKQLAIKKQQHVDNITQIEDATEKLKVNAESS 50 60 70 80 90 100 120 130 140 150 160 170 mKIAA0 KAWLTQKFTELRLLLDEEEVLAKKFIDKSTQLTLQVYREQAETCGKQIEVMDDFSTRVWG :.:: :::::::::::::.::::::::.:::.:::: :::..: .:..:..:.:.:::. gi|109 KTWLKGKFTELRLLLDEEEALAKKFIDKNTQLALQVYGEQADSCREQLDVVNDLSNRVWS 110 120 130 140 150 160 180 190 200 210 220 230 mKIAA0 IGQEPNPVQLLQAYIATKTEMGQQMSPSELSHPVPLSFEPVKNFFKEFVEAIGNTLQTPM :.:::.::: :::: ::: :: .::: .:: :::::::::::.::: .:::. .:::::. gi|109 ISQEPDPVQRLQAYTATKQEMQRQMSLGELCHPVPLSFEPVKSFFKGLVEAVQSTLQTPL 170 180 190 200 210 220 240 250 260 270 280 290 mKIAA0 DTRLKENINCQLSNSSSTKPGALLKTSPSPERALFLKYARTPTLDPDTMHARLRLSPDGL : ::::..:::: . ::::::.::::::::::.::::::::::::::::::::::: : : gi|109 DIRLKESMNCQLLDPSSTKPGTLLKTSPSPERSLFLKYARTPTLDPDTMHARLRLSADRL 230 240 250 260 270 280 300 310 320 330 340 350 mKIAA0 TVRCSLLGRLGPRPAPRFDALRQVLGRDGFAAGRHYWEVDVQEAGVGWWVGAAYPSLRRR ::::.::: ::: :: ::::: :::.:: ::::::::::::::::.:::::::: ::::: gi|109 TVRCGLLGSLGPVPALRFDALWQVLARDCFAAGRHYWEVDVQEAGAGWWVGAAYASLRRR 290 300 310 320 330 340 360 370 380 390 400 410 mKIAA0 GASAAARLGCNRESWCVKRYDLEYWAFHDGQRSRLRPRRDPHRLGVFLDYEAGILAFYDV ::::::::::::.:::.::::::::::::::::::::: : :::::::::::.:::::: gi|109 GASAAARLGCNRQSWCLKRYDLEYWAFHDGQRSRLRPRDDLDRLGVFLDYEAGVLAFYDV 350 360 370 380 390 400 420 430 440 450 mKIAA0 AGGMSHLHTFHAAFQEPLYPALRLWEGPISIPRLP .:.:::::::.:.::::.::::::::: ::: ::: gi|109 TGSMSHLHTFRATFQEPVYPALRLWEGAISIARLP 410 420 430 440 >>gi|73971864|ref|XP_854943.1| PREDICTED: similar to tri (449 aa) initn: 2040 init1: 1246 opt: 2048 Z-score: 2365.9 bits: 447.0 E(): 4.5e-123 Smith-Waterman score: 2048; 70.276% identity (84.793% similar) in 434 aa overlap (24-453:16-449) 10 20 30 40 50 60 mKIAA0 PTTLHREQRLPLRMASETTEARAPFQPDGAYGWRCPEHSERPAELFCRRCGRCVCALCPV : : : ::.::::..: :::::::: ::::::::: gi|739 MAGAGVPSGTRGGPGPAQRDDPSGWHCPEHGDRVAELFCRRCRRCVCALCPV 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 LGAHRGHPVGLAEEEAVRVQKLIQDCLECLATKKRQHADNIAHLEDAGERLKVYADSSKA ::::::: : ::.:::..:::: :.::. : .:..:.. ::...:::.:.::..:.:::. gi|739 LGAHRGHQVVLAREEAAHVQKLTQECLKQLEAKQQQQVGNITQIEDAAEKLKAHAESSKT 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 WLTQKFTELRLLLDEEEVLAKKFIDKSTQLTLQVYREQAETCGKQIEVMDDFSTRVWGIG :: ::::::::::::::::: ::::::::::..:::: :.: .::. : ..:.::: :. gi|739 WLMGKFTELRLLLDEEEVLAKTFIDKSTQLTLRAYREQIESCKEQIDGMHSLSSRVWRIN 120 130 140 150 160 170 190 200 210 220 230 mKIAA0 QEPNPVQLLQAYIATKTEMGQQMSPSELSHPVPLSFE-PVKNFFKEFVEAIGNTLQTPMD :::.:. :::...: :.: ..: :: . : : : . .. :. :: : gi|739 QEPDPMLLLQVMLAGDTRMPFVLQPPSQSHSTGLPCELPSSPGATHLNSCSGKGLQPPGR 180 190 200 210 220 230 240 250 260 270 280 290 mKIAA0 TRLKENI---NCQLSNSSSTKPGALLKTSPSPERALFLKYARTPTLDPDTMHARLRLSPD :...... :::::.::::: .::::::::::.:::::::::::.::::::::::: : gi|739 THFSQSVTDMNCQLSGSSSTKLVSLLKTSPSPERSLFLKYARTPTLEPDTMHARLRLSAD 240 250 260 270 280 290 300 310 320 330 340 350 mKIAA0 GLTVRCSLLGRLGPRPAPRFDALRQVLGRDGFAAGRHYWEVDVQEAGVGWWVGAAYPSLR :::::.:.::::: :: ::: : :::::: .:::::::::::::::::::::::: ::: gi|739 RLTVRCALVGRLGPAPALRFDKLWQVLGRDCYAAGRHYWEVDVQEAGVGWWVGAAYASLR 300 310 320 330 340 350 360 370 380 390 400 410 mKIAA0 RRGASAAARLGCNRESWCVKRYDLEYWAFHDGQRSRLRPRRDPHRLGVFLDYEAGILAFY : ::::::::::::.:::.::::::::::::::::::::: :: :::::::::::.:::: gi|739 RCGASAAARLGCNRQSWCLKRYDLEYWAFHDGQRSRLRPRDDPDRLGVFLDYEAGVLAFY 360 370 380 390 400 410 420 430 440 450 mKIAA0 DVAGGMSHLHTFHAAFQEPLYPALRLWEGPISIPRLP ::.:::::::::.:.:::::::::::::: ::: ::: gi|739 DVSGGMSHLHTFRASFQEPLYPALRLWEGAISISRLP 420 430 440 >>gi|194669532|ref|XP_600917.4| PREDICTED: similar to tr (508 aa) initn: 1966 init1: 1063 opt: 2043 Z-score: 2359.4 bits: 446.0 E(): 1e-122 Smith-Waterman score: 2043; 67.105% identity (82.675% similar) in 456 aa overlap (8-453:55-508) 10 20 30 mKIAA0 PTTLHREQRLPLRMASE-----TTEARAPFQPDGAYG :.: :::. : . .: .:. : : gi|194 PPFPAGTGRAPPQRPAFDSPRASRCCSAAAQKLGGRMAGSAVLKGTPGGLGPAEPEDARG 30 40 50 60 70 80 40 50 60 70 80 90 mKIAA0 WRCPEHSERPAELFCRRCGRCVCALCPVLGAHRGHPVGLAEEEAVRVQKLIQDCLECLAT : : ::..: .::::::: :::::::::::.:::::.::: .::.::::. :.::. ::: gi|194 WLCSEHGDRVVELFCRRCRRCVCALCPVLGSHRGHPIGLALDEAARVQKFTQECLKHLAT 90 100 110 120 130 140 100 110 120 130 140 150 mKIAA0 KKRQHADNIAHLEDAGERLKVYADSSKAWLTQKFTELRLLLDEEEVLAKKFIDKSTQLTL ::.:.. ::...:::.:.::..:.:::.::: ::.::::::.:::.::::::::.:::.: gi|194 KKQQQVGNITQIEDAAEKLKAHAESSKTWLTGKFAELRLLLEEEEALAKKFIDKNTQLAL 150 160 170 180 190 200 160 170 180 190 200 210 mKIAA0 QVYREQAETCGKQIEVMDDFSTRVWGIGQEPNPVQLLQAYIATKTEMGQQMSPSELSHPV :.: :: ..::.::.::. .:.:.: :.:: ::::::: : ::. .. :::: .:: ::: gi|194 QAYTEQIKSCGEQIDVMNTLSNRIWTISQETNPVQLLQEYTATEQQIQQQMSLGELCHPV 210 220 230 240 250 260 220 230 240 250 260 270 mKIAA0 PLSFEPVKNFFKEFVEAIGNTLQTPMDTRLKENINCQLSNSSSTKPGALLKTSPSPERAL : ::::::.:::..:::. . ::::.:.::::. :::::.: ..::.::::::::::.: gi|194 PHSFEPVKSFFKDLVEAMQSLLQTPLDVRLKESRNCQLSGSC-VQPGSLLKTSPSPERSL 270 280 290 300 310 320 280 290 300 310 320 mKIAA0 FLKYARTPTLDPDTMHA-----RLRLSPDGLTVRCSLLGRLGPRPAPRFDALRQVLGRDG ::: .:: . : . :::::: : ::::: :::.:: gi|194 FLK-CKTPGVGRGGRGAGQPXXXXXXXXXXXXXXXXXLGRLGPTAALRFDALWQVLSRDC 330 340 350 360 370 380 330 340 350 360 370 380 mKIAA0 FAAGRHYWEVDVQEAGVGWWVGAAYPSLRRRGASAAARLGCNRESWCVKRYDLEYWAFHD ::::::::::::::::::::::::: ::::.::: ::::::::.:::.:::::::::::: gi|194 FAAGRHYWEVDVQEAGVGWWVGAAYGSLRRHGASDAARLGCNRQSWCLKRYDLEYWAFHD 390 400 410 420 430 440 390 400 410 420 430 440 mKIAA0 GQRSRLRPRRDPHRLGVFLDYEAGILAFYDVAGGMSHLHTFHAAFQEPLYPALRLWEGPI ::::::::.:: :::::::::::.::::::.:::::::::.:::::::::::::::: : gi|194 CQRSRLRPRHDPDRLGVFLDYEAGVLAFYDVTGGMSHLHTFRAAFQEPLYPALRLWEGAI 450 460 470 480 490 500 450 mKIAA0 SIPRLP :: ::: gi|194 SISRLP 453 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Thu Mar 12 23:46:44 2009 done: Thu Mar 12 23:53:30 2009 Total Scan time: 916.570 Total Display time: 0.120 Function used was FASTA [version 34.26.5 April 26, 2007]