Comparison of KIAA cDNA sequences between mouse and human (KIAA1754)
<<Original sequence data>>
mouse mKIAA1754 (msh24354) length: 3682 bp, CDS: 3 - 1769
human KIAA1754 (pj02616) length: 4088 bp, CDS: 32 - 1816
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 50 - 52 1 2 66.7
CDS: 53 - 1836 1405 338 19.4
3'UTR: 1837 - 4202 1205 671 35.8
amino acid
CDS: 53 - 1836 439 149 25.3
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
I
msh24354 1 .................................................A 1
pj02616 1 AGCGGGGGCATCGCCGCCCGCGCCCCTCTAAGTGCCGGGCCGCAAGCTCC 50
V P G R K L H
51 ----+----*----+----*----+----*----+----*----+----* 100
P G S L - D P G P R P A L E R
msh24354 2 TCCCCGGCAGCCTGC.AGACCCGGGACCACGACCCGCG..CTTGGAGCGA 48
|| | || |||||| || ||| || || ||| || || | || |
pj02616 51 ACCGCAGCCGCCTGCAAGCAGCGGCGCCTCGGCCCTCGACCTGCGCGCAA 100
R S R L Q A A A P R P S T C A Q
101 ----+----*----+----*----+----*----+----*----+----* 150
G P L G I P A A A A
msh24354 49 GGCCCACTCGGTATCCCTGCGGCGGCCGCG.................... 78
||| | | | || | | | || |||
pj02616 101 AGCCTGTGCTGGAGCCGTCCTCCCGCGGCGGGGACCGGGACCGGGGACCC 150
S L C W S R P P A A G T G T G D P
151 ----+----*----+----*----+----*----+----*----+----* 200
R T T A A A M A M E L F R V C
msh24354 79 ..GCCGAACGACAGAGACTGCAGCTATGGCCATGGAACTCTTCCGGGTCT 126
||| | ||| || || || | |||||||||| |||||||| || |
pj02616 151 AAGCCAATCGAAAG...CTCCAACCATGGCCATGGGGCTCTTCCGCGTGT 197
S Q S K A P T M A M G L F R V C
201 ----+----*----+----*----+----*----+----*----+----* 250
L V V V T A I I N H P L L F P R
msh24354 127 GTCTGGTCGTGGTGACAGCCATCATTAACCACCCTCTGCTGTTCCCACGG 176
||||||| |||||||| |||||||| |||||||| ||||||||||| |||
pj02616 198 GTCTGGTGGTGGTGACGGCCATCATCAACCACCCGCTGCTGTTCCCGCGG 247
L V V V T A I I N H P L L F P R
251 ----+----*----+----*----+----*----+----*----+----* 300
E N A T I P E N E E E I I R K M Q
msh24354 177 GAGAATGCCACGATTCCCGAGAACGAGGAAGAGATCATACGCAAGATGCA 226
||||| ||||| | |||||||||||||| |||||||| |||||||||||
pj02616 248 GAGAACGCCACAGTCCCCGAGAACGAGGAGGAGATCATCCGCAAGATGCA 297
E N A T V P E N E E E I I R K M Q
301 ----+----*----+----*----+----*----+----*----+----* 350
E H Q E K L R L E Q L R L E E E V
msh24354 227 GGAGCACCAGGAGAAGCTGCGCCTGGAGCAGCTACGCCTGGAGGAGGAGG 276
|| ||||||||||||||||| ||||||||| | ||||||||||||||||
pj02616 298 GGCGCACCAGGAGAAGCTGCAGCTGGAGCAGTTGCGCCTGGAGGAGGAGG 347
A H Q E K L Q L E Q L R L E E E V
351 ----+----*----+----*----+----*----+----*----+----* 400
S R L E A E K E A L R Q V E E E
msh24354 277 TGTCACGTCTGGAGGCCGAGAAGGAGGCTCTGCGGCAGGTGGAGGAGGAG 326
|| | || |||| |||||| |||||||| ||| |||||||| |||||||
pj02616 348 TGGCTCGGCTGGCGGCCGAAAAGGAGGCACTGGAGCAGGTGGCGGAGGAG 397
A R L A A E K E A L E Q V A E E
401 ----+----*----+----*----+----*----+----*----+----* 450
Q Q Q L E A H T A W D L W T T L
msh24354 327 ...CAGCAGCAGCTAGAGGCCCACACCGCCTGGGACCTCTGGACCACACT 373
||||||| ||| | | | |||||||||||||||| ||| ||
pj02616 398 GGCAGGCAGCAGAACGAGACACGCGTGGCCTGGGACCTCTGGAGCACCCT 447
G R Q Q N E T R V A W D L W S T L
451 ----+----*----+----*----+----*----+----*----+----* 500
C M V L F L I I E V L R Q N H Q E
msh24354 374 CTGCATGGTCCTCTTCCTGATCATCGAGGTGTTGCGACAGAACCATCAGG 423
||||||| ||||||||||||| |||||||||| ||| ||| |||| ||||
pj02616 448 CTGCATGATCCTCTTCCTGATGATCGAGGTGTGGCGGCAGGACCACCAGG 497
C M I L F L M I E V W R Q D H Q E
501 ----+----*----+----*----+----*----+----*----+----* 550
G T F P E C L G G D E D E L S G
msh24354 424 AGGGCACCTTCCCGGAGTGCCTGGGTGGAGACGAGGACGAGCTGTCGGGA 473
|||| ||| || ||||||||||| || || ||||| |||||| | ||
pj02616 498 AGGGGCCCTCACCTGAGTGCCTGGGCGGTGAGGAGGATGAGCTGCCTGGG 547
G P S P E C L G G E E D E L P G
551 ----+----*----+----*----+----*----+----*----+----* 600
L G G T L L Q G L P L P N R A T L
msh24354 474 CTAGGGGGCACGCTGCTGCAGGGCCTTCCCCTGCCCAATAGGGCCACCCT 523
|| |||||| | | |||||||||| |||||||||| | |||||| ||
pj02616 548 CTGGGGGGCGCCCCCTTGCAGGGCCTCACCCTGCCCAACAAGGCCACGCT 597
L G G A P L Q G L T L P N K A T L
601 ----+----*----+----*----+----*----+----*----+----* 650
D H F Y E H C I R S T T G D A T R
msh24354 524 GGACCACTTCTACGAGCACTGTATCCGGAGCACCACGGGGGATGCCACCC 573
| |||||| || |||| ||| |||||| | |||||| ||||| |||
pj02616 598 TGGCCACTTTTATGAGCGCTGCATCCGGGGGGCCACGGCCGATGCAGCCC 647
G H F Y E R C I R G A T A D A A R
651 ----+----*----+----*----+----*----+----*----+----* 700
T Q E F V E G F V D D L L E A L
msh24354 574 GCACCCAGGAGTTTGTGGAAGGTTTCGTGGATGATCTGCTGGAAGCCCTG 623
| |||| |||||| ||||||| ||||||||||| ||||||||||||||
pj02616 648 GTACCCGGGAGTTCCTGGAAGGCTTCGTGGATGACTTGCTGGAAGCCCTG 697
T R E F L E G F V D D L L E A L
701 ----+----*----+----*----+----*----+----*----+----* 750
R S T Y N G K T D M E L E D F I G
msh24354 624 AGGAGCACCTACAACGGGAAAACCGACATGGAATTGGAGGACTTCATCGG 673
|||||| || |||| || | ||||||||||| ||||||||||||| ||
pj02616 698 AGGAGCCTCTGCAACCGGGACACCGACATGGAGGTGGAGGACTTCATTGG 747
R S L C N R D T D M E V E D F I G
751 ----+----*----+----*----+----*----+----*----+----* 800
V G S M Y E N W Q V E R P L R C H
msh24354 674 CGTGGGCAGCATGTATGAGAACTGGCAAGTGGAGAGGCCACTACGGTGCC 723
||||| ||||||||| ||||||||||| ||||| |||||||| | |||||
pj02616 748 CGTGGACAGCATGTACGAGAACTGGCAGGTGGACAGGCCACTGCTGTGCC 797
V D S M Y E N W Q V D R P L L C H
801 ----+----*----+----*----+----*----+----*----+----* 850
L F I P F I P P E P Y S F H P E
msh24354 724 ACTTGTTTATACCCTTCATACCCCCAGAGCCCTACAGCTTCCACCCAGAG 773
|| | || | ||||||| |||||| ||||||||| ||||||||||||||
pj02616 798 ACCTTTTCGTGCCCTTCACACCCCCCGAGCCCTACCGCTTCCACCCAGAG 847
L F V P F T P P E P Y R F H P E
851 ----+----*----+----*----+----*----+----*----+----* 900
F W C S S L S T P L E R Q G Y G Q
msh24354 774 TTCTGGTGCTCCAGCCTTTCAACGCCCCTGGAACGTCAGGGCTATGGCCA 823
||||||||||| ||| ||| ||||||||| || |||||||| |||||
pj02616 848 CTCTGGTGCTCCGGCCGCTCAGTGCCCCTGGATCGCCAGGGCTACGGCCA 897
L W C S G R S V P L D R Q G Y G Q
901 ----+----*----+----*----+----*----+----*----+----* 950
I K V T L A D G N P L G C V C G K
msh24354 824 GATCAAGGTGACGCTGGCTGACGGGAACCCTCTAGGCTGTGTCTGCGGCA 873
|||||||||| | || || ||| || | | |||| |||||||||
pj02616 898 GATCAAGGTGGTCCGCGCCGATGGGGACACATTGAGCTGCATCTGCGGCA 947
I K V V R A D G D T L S C I C G K
951 ----+----*----+----*----+----*----+----*----+----* 1000
A K L E E D M L C L L Y G K N R
msh24354 874 AGGCTAAGCTTGAGGAGGATATGTTGTGTCTCCTCTACGGCAAGAATAGA 923
|| | ||||| | ||| || ||| |||||||||| |||||| ||| ||
pj02616 948 AGACCAAGCTCGGGGAAGACATGCTGTGTCTCCTGCACGGCAGGAACAGC 997
T K L G E D M L C L L H G R N S
1001 ----+----*----+----*----+----*----+----*----+----* 1050
E A W P C G E M E G L L C
msh24354 924 GAGGCGTGGCCCAGCAGTGCCGGGTGCGGTGAGATGGAGGGCTTGCTGTG 973
|||| ||| ||||| || |||||| | |||||||
pj02616 998 ATGGCGCCTCCC............TGCGGCGACATGGAGAACCTGCTGTG 1035
M A P P C G D M E N L L C
1051 ----+----*----+----*----+----*----+----*----+----* 1100
S R E S S Y L D V M Q V M K W F Q
msh24354 974 TTCCAGAGAGTCCTCCTATCTCGATGTCATGCAGGTCATGAAGTGGTTTC 1023
| ||| ||| ||| || || || |||||||||||||||||||| |
pj02616 1036 TGCCACAGATTCCCTGTACCTGGACACGATGCAGGTCATGAAGTGGTTCC 1085
A T D S L Y L D T M Q V M K W F Q
1101 ----+----*----+----*----+----*----+----*----+----* 1150
M A L T R A W H R I A H K Y E F
msh24354 1024 AGATGGCCCTCACCAGAGCGTGGCACCGCATCGCCCACAAGTATGAGTTT 1073
||| ||||||||||||||| ||| | |||||||||||||||| |||||
pj02616 1086 AGACGGCCCTCACCAGAGCCTGGAAGGGCATCGCCCACAAGTACGAGTTC 1135
T A L T R A W K G I A H K Y E F
1151 ----+----*----+----*----+----*----+----*----+----* 1200
D L A F G E L D T P G S L K I K F
msh24354 1074 GACCTTGCCTTTGGAGAGCTGGACACCCCAGGGTCTCTCAAAATCAAGTT 1123
||||| |||||||| ||||||||| ||| ||||| || || ||||||||
pj02616 1136 GACCTGGCCTTTGGCCAGCTGGACAGCCCGGGGTCCCTGAAGATCAAGTT 1185
D L A F G Q L D S P G S L K I K F
1201 ----+----*----+----*----+----*----+----*----+----* 1250
R S G K S M P F I L T P V I Q C N
msh24354 1124 CCGCTCGGGGAAGTCCATGCCCTTCATCTTGACTCCTGTGATCCAGTGTA 1173
||| || ||||||| ||||||||||| | ||| ||||||||||||||||
pj02616 1186 CCGTTCAGGGAAGTTCATGCCCTTCAACCTGATTCCTGTGATCCAGTGTG 1235
R S G K F M P F N L I P V I Q C D
1251 ----+----*----+----*----+----*----+----*----+----* 1300
D S D L Y F I L Q L P K E P C G
msh24354 1174 ATGACTCAGACCTGTACTTCATCTTACAACTTCCCAAGGAGCCCTGTGGG 1223
||||||| ||||||||||| ||| || ||||||| |||||||| || |
pj02616 1236 ATGACTCGGACCTGTACTTTGTCTCCCACCTTCCCAGGGAGCCCTCTGAG 1285
D S D L Y F V S H L P R E P S E
1301 ----+----*----+----*----+----*----+----*----+----* 1350
G G P A S S A H W L L S F A V Y E
msh24354 1224 GGAGGCCCAGCCTCCAGCGCTCACTGGCTCCTGTCCTTTGCTGTCTATGA 1273
|| ||||||||||||| | ||||||||||||||||||||||||||||
pj02616 1286 GGCACCCCAGCCTCCAGCACAGACTGGCTCCTGTCCTTTGCTGTCTATGA 1335
G T P A S S T D W L L S F A V Y E
1351 ----+----*----+----*----+----*----+----*----+----* 1400
R E F L R M T G K A L P E G A C H
msh24354 1274 GCGAGAGTTCCTCCGGATGACAGGCAAGGCTTTGCCAGAGGGTGCCTGCC 1323
|||| | |||||| ||| |||| ||||| |||| ||||| |||||||
pj02616 1336 GCGACACTTCCTCAGGACGACACTAAAGGCACTGCCCGAGGGCGCCTGCC 1385
R H F L R T T L K A L P E G A C H
1401 ----+----*----+----*----+----*----+----*----+----* 1450
L S C L Q I A S F L L S K Q T R
msh24354 1324 ACCTGAGCTGTTTGCAGATCGCCTCCTTCTTGCTCTCCAAGCAGACCCGT 1373
|||| ||||| ||||||| || |||||| ||||||||||||||| |||
pj02616 1386 ACCTCAGCTGCCTGCAGATAGCATCCTTCCTGCTCTCCAAGCAGAGCCGC 1435
L S C L Q I A S F L L S K Q S R
1451 ----+----*----+----*----+----*----+----*----+----* 1500
L T G P S G L S D Y H L K T A L L
msh24354 1374 CTGACGGGTCCCAGTGGGCTGAGTGACTACCACCTAAAGACTGCCCTGCT 1423
||||| |||||||| ||||| || ||||||||| ||||| ||||| ||
pj02616 1436 CTGACCGGTCCCAGCGGGCTCAGCAGCTACCACCTGAAGACGGCCCTACT 1485
L T G P S G L S S Y H L K T A L L
1501 ----+----*----+----*----+----*----+----*----+----* 1550
H L L L S R Q A S D W K A S K L D
msh24354 1424 GCATCTCCTGCTGTCCCGGCAGGCCTCTGACTGGAAGGCCAGCAAGCTGG 1473
||| ||||| || |||||||||| | ||||||||||| | ||||||
pj02616 1486 GCACCTCCTACTCCTCCGGCAGGCCGCCGACTGGAAGGCGGGGCAGCTGG 1535
H L L L L R Q A A D W K A G Q L D
1551 ----+----*----+----*----+----*----+----*----+----* 1600
V R L Q D L F C F L E R S L L E
msh24354 1474 ATGTACGCCTGCAGGACCTCTTCTGCTTCCTGGAGAGGAGCCTGCTGGAG 1523
| | || ||||| || | | ||||||||||||| |||| |||| ||
pj02616 1536 ACGCTCGTCTGCACGAGTTGCTGTGCTTCCTGGAGAAGAGCTTGCTCCAG 1585
A R L H E L L C F L E K S L L Q
1601 ----+----*----+----*----+----*----+----*----+----* 1650
K K L Y H F F M G N H K V P E A L
msh24354 1524 AAGAAACTCTATCACTTCTTCATGGGCAACCACAAGGTGCCTGAGGCTCT 1573
||||| ||| | ||||||||||| ||||||| ||||||||||||||| |
pj02616 1586 AAGAAGCTCCACCACTTCTTCATCGGCAACCGCAAGGTGCCTGAGGCCAT 1635
K K L H H F F I G N R K V P E A M
1651 ----+----*----+----*----+----*----+----*----+----* 1700
G L P E V V R R A E P L N L F R P
msh24354 1574 GGGTCTCCCAGAGGTTGTGCGCAGAGCCGAGCCTCTCAATCTCTTCCGGC 1623
||| ||||| |||| |||| ||| |||||||| ||||| ||||||||||
pj02616 1636 GGGACTCCCTGAGGCCGTGCTCAGGGCCGAGCCCCTCAACCTCTTCCGGC 1685
G L P E A V L R A E P L N L F R P
1701 ----+----*----+----*----+----*----+----*----+----* 1750
F V L Q R T L Y R N T V D S F Y
msh24354 1624 CCTTCGTCTTGCAGCGGACTCTTTACCGGAACACAGTGGACTCCTTCTAT 1673
|||||||| ||||||| | |||||||| || ||| ||||||||||||||
pj02616 1686 CCTTCGTCCTGCAGCGAAGCCTTTACCGTAAGACACTGGACTCCTTCTAT 1735
F V L Q R S L Y R K T L D S F Y
1751 ----+----*----+----*----+----*----+----*----+----* 1800
E M L K N A P A L I S E Y S L H V
msh24354 1674 GAAATGCTTAAGAACGCCCCGGCGCTCATTAGCGAGTATTCCCTCCATGT 1723
|| ||||| ||||| ||||| ||||||||||||||||||||||| |||||
pj02616 1736 GAGATGCTCAAGAATGCCCCAGCGCTCATTAGCGAGTATTCCCTACATGT 1785
E M L K N A P A L I S E Y S L H V
1801 ----+----*----+----*----+----*----+----*----+----* 1850
P S G Q P T T K S C
msh24354 1724 CCCTTCAGTTCGTGCCAGCCCACCACCAAAAGCTGTCGTCTCGTA.GTAG 1772
||| |||| |||||| ||| | |||||||| ||||| || |
pj02616 1786 CCCCTCAG.....ACCAGCCTACCCCAAAAAGCTGACGTCTTTTACAGAA 1830
P S D Q P T P K S *
1851 ----+----*----+----*----+----*----+----*----+----* 1900
msh24354 1773 TTTAAGATTTGGGGGTTGAGGAGGGAGAGCCATCCCGTGCGTCGACCTTC 1822
| | ||| | | | || | | | |||||| ||| || |
pj02616 1831 TGTGGGATCCTCGAGCTAAGATGAG...GGCATCCCTCACGTTCACACCC 1877
1901 ----+----*----+----*----+----*----+----*----+----* 1950
msh24354 1823 CTGG.....GCCCTGTGACCTCACACAGGAAACACAGTAGATCTAGAGGG 1867
|||| | | ||| || | | | | | | |||
pj02616 1878 CTGGTGGCATCTGCCAGCCCTGTTCTGGGGACAAGGCGGGCTTTCGTGGG 1927
1951 ----+----*----+----*----+----*----+----*----+----* 2000
msh24354 1868 AGCCGAGGCTCAGTTTCCCAGGAAGCCAGGCCCTACAGAGTGAAGGAAAC 1917
||||| |||||| | ||||||||||| ||||||||| | |||||||
pj02616 1928 AGCCG.TGCTCAGCCTGCCAGGAAGCCAAGCCCTACAGTGCAGAGGAAAC 1976
2001 ----+----*----+----*----+----*----+----*----+----* 2050
msh24354 1918 AAGAGTTACAACTAGACGCTGGTTTGCCTTTCCGCCACGGGGGCTTGTTG 1967
||| || |||| || ||||||||| ||| ||| ||| || ||
pj02616 1977 .AGAATTTCAACGGGAAGCTGGTTTG.CTTCATACCATTGGGATCTGCTG 2024
2051 ----+----*----+----*----+----*----+----*----+----* 2100
msh24354 1968 GTAAAACCATTGTTTGGGTTTGGGTACCAATCGTTTGTAGCTTAGTTTTA 2017
||||| | || ||||||||| || || ||| ||| || ||| || |
pj02616 2025 GTAAAGCTGTTATTTGGGTTTAGGGACTGATCCCTTGCAGTTTACTTCTG 2074
2101 ----+----*----+----*----+----*----+----*----+----* 2150
msh24354 2018 GATCACTATGAACGGCCAAGACAGTGACCACACAGTCTCTAGGGTACTGA 2067
|||||| ||||| |||||||| ||| | ||| || | || ||||
pj02616 2075 GATCACCATGAATGGCCAAGATGGTGGCAGAACACGCTGT.GGACCCTGA 2123
2151 ----+----*----+----*----+----*----+----*----+----* 2200
msh24354 2068 GTTAGAGAGAGCGCAAGCACTGACCAGAATGCAGTCCTTTCTGTAGCATA 2117
|||||||| | |||| || | || | | |||| || | | |
pj02616 2124 GTTAGAGACAATGCAAATGTTGGATTGGGTGTAATTCTTTTTGAATCCCA 2173
2201 ----+----*----+----*----+----*----+----*----+----* 2250
msh24354 2118 G.TCCGTTCTGTGTTCCA..TAGCAAAGAGGAGCTACCAGGATGGTGCTG 2164
| ||| ||||| | | | |||||| |||| || ||| ||
pj02616 2174 GATCCAGTCTGTACTTGAATATGAGCAGAGGATCTACAAGAATGCTGACA 2223
2251 ----+----*----+----*----+----*----+----*----+----* 2300
msh24354 2165 GGGATC.....TGAGACCCAGCACTGC..ACCCCAGGCGTTCCAGGCCCC 2207
|||| | | ||||||||||| | |||||| | | | ||||
pj02616 2224 GGGAACCGTGTTAAGACCCAGCACCCCTATTCCCAGGAGCTTCTGGCCTG 2273
2301 ----+----*----+----*----+----*----+----*----+----* 2350
msh24354 2208 AGCCATCTGCAGATGAATCTTGAATGGGGACAGATGTGGGAATTCACAGC 2257
| |||||||||| || | || ||||||||| ||||||| || |
pj02616 2274 A.CCATCTGCAGCCAAAGCACTAACAGGGACAGATATGGGAATGTCCA.C 2321
2351 ----+----*----+----*----+----*----+----*----+----* 2400
msh24354 2258 CTTGGAACCGCATCGTGCACAGTAATAGAGGTCCCACAGTGGCTG..... 2302
||| || ||||||| ||||| ||||| |||||||| ||||||
pj02616 2322 CTTTGATCCGCATCCTGCAC...AATAGTGGTCCCACCATGGCTGCCACT 2368
2401 ----+----*----+----*----+----*----+----*----+----* 2450
msh24354 2303 ..........AGTTGGCTAAAAGAACCTGCCAGAAGGCTAGGGGCCCGGT 2342
| |||| |||||| | || || | | || || ||
pj02616 2369 TTTTTATACTATTTGGAGAAAAGACCTTGTATAAATTCGA.GGCCCGAGT 2417
2451 ----+----*----+----*----+----*----+----*----+----* 2500
msh24354 2343 GGCTAATGTCTCCACTACAGAGAAGTGGGGCCTTGGTGGTGGAGTG.TCT 2391
| |||| ||||| ||| ||| |||| |||||||| || |
pj02616 2418 GACTAACGTCTCTGTCACACGGAAATGGGTACTTGGTGGCATAGAGAAAC 2467
2501 ----+----*----+----*----+----*----+----*----+----* 2550
msh24354 2392 AAAGCTGGCCAGTTTCTCAG........................GCACAC 2417
| | | |||| ||| |||| ||||
pj02616 2468 ACAATTAGCCACTTTTTCAGCTACACTTCTCACTCAGCTGCACCCTACAC 2517
2551 ----+----*----+----*----+----*----+----*----+----* 2600
msh24354 2418 ATCTTACTCAGGTGCATCCCCTGCTGCTCT......ACCCTTGTATGGGG 2461
||| ||||||||||| ||||| ||||| | || ||| |||
pj02616 2518 TTCTCACTCAGGTGCACCCCCTTCTGCTGTCCTTTCCCCAACGTACTGGG 2567
2601 ----+----*----+----*----+----*----+----*----+----* 2650
msh24354 2462 TCCCAATCACAGTGGGTGCCATTTACCACACTGGGTGCTGGCCCAGAAGC 2511
|||| | | |||||| |||| ||||||||||||| || ||| |||
pj02616 2568 TCCCGAGCGTGGTGGGT...ATTTGCCACACTGGGTGCCAGCTCAGCAGC 2614
2651 ----+----*----+----*----+----*----+----*----+----* 2700
msh24354 2512 CCCTCTCC.........TCTCTCCGTTGCTGGTCTTACCAGCCAGCAGTA 2552
||| | || ||||||| ||||||||| | | | || |
pj02616 2615 CCCCCACCTCTCTTTATTCTCTCCAAAGCTGGTCTTTCTGACTATCATTG 2664
2701 ----+----*----+----*----+----*----+----*----+----* 2750
msh24354 2553 TGGCAG............................................ 2558
||| ||
pj02616 2665 TGGTAGGGGGAGGACAGATGCTAAAGGTGGAAGCTGACCTGGAAAAAGAG 2714
2751 ----+----*----+----*----+----*----+----*----+----* 2800
msh24354 2559 .....................AAGGACACAGGGACAA............. 2574
||||||| ||| ||
pj02616 2715 ACACACGGGGTGACTGTGGCAAAGGACAGCTGGAAAAGAAACTCTATCAC 2764
2801 ----+----*----+----*----+----*----+----*----+----* 2850
msh24354 2575 .................................................. 2575
pj02616 2765 TTCTTCATTGGCAACCACAAGGCACCTGAGGCCATGGCACTCCCAGAGGC 2814
2851 ----+----*----+----*----+----*----+----*----+----* 2900
msh24354 2575 .................................................. 2575
pj02616 2815 TGTGCGCAGAGCCAAGCCTCTCAACCTCTTCTGGCCCTGCGTCCTGCAGC 2864
2901 ----+----*----+----*----+----*----+----*----+----* 2950
msh24354 2575 .................................................. 2575
pj02616 2865 GAAGTCTCTGCTGTAAGACAGTAGACTCCTTCGATGAGGTGCTCAAAAAT 2914
2951 ----+----*----+----*----+----*----+----*----+----* 3000
msh24354 2575 .............................AGTTCGACCCACTTTGAGGAA 2595
||| | |||| || |||
pj02616 2915 GCTACCCGGGGTGGTGGTGTCTGGCTTGCAGTCTGGCCCAGTTCAGAGAA 2964
3001 ----+----*----+----*----+----*----+----*----+----* 3050
msh24354 2596 AGCTAGAGATCCCTGGGACAAGGGTTAGGATATCTCTAACCCAT.CTTGG 2644
|| | ||| | ||| | | || | ||| | | | | || |
pj02616 2965 AGTTGCAGAGATCAGGGGCCAAGGATGTCATAGCCCCAGGTTGTCCTCAG 3014
3051 ----+----*----+----*----+----*----+----*----+----* 3100
msh24354 2645 GGTCCTGGTCATAGGGAAAGGTGAGCTTATAAGCCACAGGCACTATGAAA 2694
||||| || ||||| | |||| || | ||| || | |||||| ||
pj02616 3015 GGTCCCAATCCTAGGGCAGGGTGTGCATGGAAG...CAAGAACTATGGAA 3061
3101 ----+----*----+----*----+----*----+----*----+----* 3150
msh24354 2695 ACCCAGCTCTGGTCCTCGGACCCCGAGCATCTCCCAGTTCCTAATGCCAA 2744
||| ||||| ||| | | | | ||| | || ||||||| | || |
pj02616 3062 ACCTAGCTCCAGTCTGCAGGCTCTGAG...CCCCTAGTTCCTCACTCC.A 3107
3151 ----+----*----+----*----+----*----+----*----+----* 3200
msh24354 2745 GAGGGCCTCACCCAGTGC....CTCCAGTCTTTTCTGCACACGCCATGGT 2790
| ||| ||| | || ||| || | ||||| || || |
pj02616 3108 GCGGGGCTCCCTCACTGCACAGAACCCACCCCTTCTGTGTGGGCACTGCT 3157
3201 ----+----*----+----*----+----*----+----*----+----* 3250
msh24354 2791 GACCTCGTAGCTGACCCAGACTTAAAGAAGGTGGTAGAGGCTGGGCTCAC 2840
|||| | || |||||||||| ||||| ||| ||| ||
pj02616 3158 GACCACACAGATGACCCAGACCCAAAGAGCCTGGCAGAAGC......... 3198
3251 ----+----*----+----*----+----*----+----*----+----* 3300
msh24354 2841 TGGGGATCTATATGAGTCGTTCAAGCATAGCCTGGTTACCCAAAGGAGCG 2890
| || ||| ||| || || ||
pj02616 3199 ............TCTGTGGTTGGAGCTGGGCTCCGTCTCC.......... 3226
3301 ----+----*----+----*----+----*----+----*----+----* 3350
msh24354 2891 TTGTGAGCCCCAGACAAGACCAGAGCCTGAGGCTGGACTCCAGGACCCAG 2940
|| | | | | || || | |
pj02616 3227 ................AGGTCTGGTTCAGGGG...........GATCAGG 3249
3351 ----+----*----+----*----+----*----+----*----+----* 3400
msh24354 2941 CAGCTTCTTTTCCACTTG.ACCTTGACTGTCTGTTTGGGATTTC..TTCG 2987
|| |||||||||| || ||| |||| | |||| |||||| ||
pj02616 3250 AAGGCTCTTTTCCACCTGTGGCTTCACTGGCCCTTTGAGATTTCCTATCT 3299
3401 ----+----*----+----*----+----*----+----*----+----* 3450
msh24354 2988 CCACATCTCCTTAGGAACTTTTACAGTGGGCCAAAGAAGAAACAGTA... 3034
| | | | | || || || ||| |||||| || || | ||
pj02616 3300 CACCGTTACTTCAGTTACCCTTGCAGGGGGCCAGGGAGTCAAGAATATAC 3349
3451 ----+----*----+----*----+----*----+----*----+----* 3500
msh24354 3035 .......AGAAAGAGGTAGCGCCTGCTAGCCTTCCAGAAGTGCA...... 3071
|| | | ||| || | | | | || |||
pj02616 3350 CGTGTTCCTCCAGGGTTTAAGCCGGCCATGCCTTCCCGAGAGCATAACCA 3399
3501 ----+----*----+----*----+----*----+----*----+----* 3550
msh24354 3072 ................................GGCATCAAAATCAGGCTT 3089
| | || | |||
pj02616 3400 ACTTGACAGGGGTGCCCAGTTACCCCACAAACTGAAGGAAGGAGATCCTT 3449
3551 ----+----*----+----*----+----*----+----*----+----* 3600
msh24354 3090 CCCTTCGCCCCACACGTGC.CTCCTGTGGTCTCAAAGCTCTCCAGAAGAT 3138
||| ||||| |||| ||| | |||| | || |||||||
pj02616 3450 CCCCCGTCCCCAGGAGTGCTCTCAACCAGCCTCAGAAAGCTTGAGAAGAT 3499
3601 ----+----*----+----*----+----*----+----*----+----* 3650
msh24354 3139 AGACGATTTTGCCACCAGGGTTAAGTGGTGGTGGAGAGGATCTGCTGGGT 3188
||| ||| ||||||||||||| | |||||| | | || |||| |
pj02616 3500 GGACCCTTTGCCCACCAGGGTTAATTCCTGGTGGGGCAGCTCGGCTGTGA 3549
3651 ----+----*----+----*----+----*----+----*----+----* 3700
msh24354 3189 GCACAGAAGCCAGAGGCAATAGGATACTTGAGTACCGGCGGTGGGGGTTA 3238
|| | | ||| | | | | ||| | | | || |||
pj02616 3550 TCAGGGCAACCAAACCTATAGGAAGCCTT..CCAGTGTGAGCTGGAATTA 3597
3701 ----+----*----+----*----+----*----+----*----+----* 3750
msh24354 3239 AACTGAGCATGCGC..GGTCCTGCCCCTCCGCAGCTCCAATTGTCACCCT 3286
||||| |||| || || |||||| |||| || || ||| |
pj02616 3598 GACTGAACATGTGCTTGGGCCTGCCTCTCCCTAGACGCAGTTG....CGG 3643
3751 ----+----*----+----*----+----*----+----*----+----* 3800
msh24354 3287 AGCAC.CCAGTCATGGAGCCTACTCAATGTGCAGCTCTGTCAACAGC... 3332
|||| |||| | || || ||||| ||| | || || ||||
pj02616 3644 GGCACTCCAGGGAATGAACCAGCTCAA.GTGTGTCCCTAACAGCAGCCTG 3692
3801 ----+----*----+----*----+----*----+----*----+----* 3850
msh24354 3333 .......................CCTAAGCCGCCTCACCCGAGAGGTACC 3359
||| | || ||||| | | | |
pj02616 3693 GAGCTACCCCCAATCCCTCACAGCCTGACCCTCCTCATTCCATCAGATGC 3742
3851 ----+----*----+----*----+----*----+----*----+----* 3900
msh24354 3360 ..TTCCAGAGGGGAGGCAGATGTCCTCATTGTCACCTGTGCCTTTCCTGG 3407
|| ||| | |||| || |||| ||| || || | |||
pj02616 3743 ATTTGTAGAATCGGGGCAAATTTCCTTATTTATTTATGGCCCATGCCTTT 3792
3901 ----+----*----+----*----+----*----+----*----+----* 3950
msh24354 3408 CTCACTCAT.......ATCCGGCTGTGTTTCCAGGAGTGCCCGGCAACCA 3450
| | ||| | |||| | | || || | ||| ||| | |||||
pj02616 3793 CCCCCTCTTCATCCTGATCCCGTTTTGCTTTGAAGAGACCCCAGTAACCA 3842
3951 ----+----*----+----*----+----*----+----*----+----* 4000
msh24354 3451 AGAACCAGCCTCCAGAAGCCAAGACCCAACCTGAGCCTCCTTCAGCTTCC 3500
| || ||||||||||||||||| ||| |||| |||| ||||||
pj02616 3843 AAAAACAGCCTCCAGAAGCCAAAACCATGCCTGGATCTCCCATAGCTTCT 3892
4001 ----+----*----+----*----+----*----+----*----+----* 4050
msh24354 3501 CCTTCGCTTCCAGG.GAAAGATCACGGGAAGGCCATGGGCAGAACATC.A 3548
|||| ||||||||| ||||| |||| | || | || |||
pj02616 3893 CCTTTGCTTCCAGGAGAAAGTTCACTGAAA........AAAAAATATCTT 3934
4051 ----+----*----+----*----+----*----+----*----+----* 4100
msh24354 3549 GTGGCTCCTTGTCTG...........CTGAGCACCCGGGCAGGACAGGAG 3587
||||| ||||| || | || | | || || |||
pj02616 3935 CTGGCTTCTTGTGTGTACAGAGACAACAGAACTCGGTGGGGAAACGGGAA 3984
4101 ----+----*----+----*----+----*----+----*----+----* 4150
msh24354 3588 ACTGTCCCACACCAGGGCTGCTT.......TGGAAGCAGCAGGGCTCTTA 3630
|| | | ||||| ||||||| | |||||| ||||||||
pj02616 3985 TCTTTTCTGCACCAAAGCTGCTTCTAAAGCAGAAAGCAGTGGGGCTCTTG 4034
4151 ----+----*----+----*----+----*----+----*----+----* 4200
msh24354 3631 GGGGTTCATGCTGCCTTGTTTGTATTAAAAGAAGAATTAAATTCTTGTAA 3680
| | ||||||||||||| ||| ||||||| ||||||||||| ||||| ||
pj02616 4035 GTGTTTCATGCTGCCTTATTTATATTAAAGGAAGAATTAAA.TCTTGCAA 4083
4201 ----+ 4205
msh24354 3681 GG... 3682
||
pj02616 4084 GGAGT 4088