# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/msh24271.fasta.nr -Q ../query/mKIAA0539.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0539, 1127 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7921146 sequences Expectation_n fit: rho(ln(x))= 5.0324+/-0.000181; mu= 14.9280+/- 0.010 mean_var=72.1297+/-14.050, 0's: 37 Z-trim: 37 B-trim: 0 in 0/67 Lambda= 0.151014 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|160013338|sp|Q571H0.2|NPA1P_MOUSE RecName: Full (2274) 7429 1628.9 0 gi|148671903|gb|EDL03850.1| mCG115615, isoform CRA (2297) 7429 1628.9 0 gi|149268228|ref|XP_909489.3| PREDICTED: similar t (2371) 7429 1628.9 0 gi|149268186|ref|XP_489612.5| PREDICTED: hypotheti (2378) 7429 1628.9 0 gi|149059811|gb|EDM10694.1| rCG58772, isoform CRA_ (1614) 6686 1466.9 0 gi|109492918|ref|XP_221669.4| PREDICTED: similar t (2317) 6686 1467.1 0 gi|114684339|ref|XP_531425.2| PREDICTED: nucleolar (2439) 5358 1177.8 0 gi|119630281|gb|EAX09876.1| hCG401196, isoform CRA (2271) 5336 1172.9 0 gi|8118221|gb|AAF72943.1| C21orf108 [Homo sapiens] (2248) 5334 1172.5 0 gi|160419249|sp|O60287.3|NPA1P_HUMAN RecName: Full (2271) 5334 1172.5 0 gi|74001392|ref|XP_544859.2| PREDICTED: similar to (2270) 5272 1159.0 0 gi|194226204|ref|XP_001498726.2| PREDICTED: simila (2270) 5271 1158.8 0 gi|194663878|ref|XP_608956.4| PREDICTED: similar t (2269) 4224 930.7 0 gi|126325479|ref|XP_001377563.1| PREDICTED: simila (2421) 4173 919.6 0 gi|118083840|ref|XP_425545.2| PREDICTED: similar t (2265) 3089 683.4 3.9e-193 gi|197245772|gb|AAI68562.1| Unknown (protein for M (2293) 2974 658.3 1.4e-185 gi|49118053|gb|AAH73005.1| LOC443605 protein [Xeno ( 890) 2680 594.0 1.3e-166 gi|189518563|ref|XP_696513.3| PREDICTED: similar t (1581) 2347 521.6 1.4e-144 gi|224044107|ref|XP_002186762.1| PREDICTED: URB1 r (2097) 2121 472.5 1.1e-129 gi|189528412|ref|XP_693219.3| PREDICTED: similar t (1988) 1690 378.5 2e-101 gi|47227868|emb|CAG09031.1| unnamed protein produc (2269) 1270 287.1 7.7e-74 gi|210091830|gb|EEA40072.1| hypothetical protein B (1854) 761 176.1 1.6e-40 gi|198435538|ref|XP_002126608.1| PREDICTED: simila (2089) 743 172.2 2.6e-39 gi|190586539|gb|EDV26592.1| predicted protein [Tri (1803) 716 166.3 1.4e-37 gi|156543040|ref|XP_001604348.1| PREDICTED: simila (1986) 507 120.8 7.6e-24 gi|193659728|ref|XP_001943346.1| PREDICTED: simila ( 578) 467 111.7 1.3e-21 gi|162692331|gb|EDQ78688.1| predicted protein [Phy (2778) 423 102.6 3.2e-18 gi|57226601|gb|AAW43061.1| nucleolus protein, puta (1941) 394 96.2 1.9e-16 gi|50258286|gb|EAL20977.1| hypothetical protein CN (1941) 393 96.0 2.2e-16 gi|164644167|gb|EDR08417.1| predicted protein [Lac (2057) 393 96.0 2.3e-16 gi|187024214|emb|CAP36258.1| Hypothetical protein ( 476) 377 92.0 8.6e-16 gi|147859324|emb|CAN83957.1| hypothetical protein (2715) 384 94.1 1.1e-15 gi|157337925|emb|CAO38969.1| unnamed protein produ (2599) 375 92.1 4.2e-15 gi|110761798|ref|XP_001122323.1| PREDICTED: simila ( 367) 363 88.8 5.9e-15 gi|21106019|gb|AAB66016.2| Hypothetical protein T0 ( 476) 357 87.6 1.8e-14 gi|210113077|gb|EEA60848.1| hypothetical protein B (1637) 361 88.9 2.5e-14 gi|116499480|gb|EAU82375.1| hypothetical protein C (2401) 358 88.4 5.2e-14 gi|220725830|gb|EED79801.1| predicted protein [Pos (1760) 350 86.6 1.4e-13 gi|186513993|ref|NP_194431.2| binding [Arabidopsis (2535) 347 86.0 2.9e-13 gi|4455224|emb|CAB36547.1| putative protein [Arabi (2535) 347 86.0 2.9e-13 gi|163777728|gb|EDQ91344.1| predicted protein [Mon (1913) 333 82.9 1.9e-12 gi|158600598|gb|EDP37741.1| LOC443605 protein, put ( 438) 316 78.7 8.1e-12 gi|223527122|gb|EEF29298.1| conserved hypothetical (2587) 318 79.7 2.3e-11 gi|224168971|ref|XP_002187172.1| PREDICTED: simila ( 184) 294 73.6 1.2e-10 gi|212512016|gb|EEB14863.1| hypothetical protein P ( 220) 282 71.0 8.2e-10 gi|144575627|gb|ABO93696.1| predicted protein [Ost (2142) 292 74.0 1e-09 gi|116000313|emb|CAL49993.1| unnamed protein produ (2122) 279 71.2 7.2e-09 gi|48474268|sp|O74415|YJL2_SCHPO Uncharacterized p (1568) 258 66.5 1.4e-07 gi|154692644|gb|EDN92382.1| hypothetical protein S (1136) 255 65.7 1.7e-07 gi|150857209|gb|EDN32401.1| hypothetical protein B (1133) 250 64.6 3.6e-07 >>gi|160013338|sp|Q571H0.2|NPA1P_MOUSE RecName: Full=Nuc (2274 aa) initn: 7429 init1: 7429 opt: 7429 Z-score: 8733.9 bits: 1628.9 E(): 0 Smith-Waterman score: 7429; 100.000% identity (100.000% similar) in 1127 aa overlap (1-1127:1148-2274) 10 20 30 mKIAA0 LSSLGKTLVQLLASSHQDQLQSSELLWCAE :::::::::::::::::::::::::::::: gi|160 IREVTLALLALPEAHLLTQQGTQSLGKERHLSSLGKTLVQLLASSHQDQLQSSELLWCAE 1120 1130 1140 1150 1160 1170 40 50 60 70 80 90 mKIAA0 YVRGLGALLPTLAEHELDTVFLQTLQKDPVLAPVVPEGVLEYCLARRTQTALGIASLLLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 YVRGLGALLPTLAEHELDTVFLQTLQKDPVLAPVVPEGVLEYCLARRTQTALGIASLLLQ 1180 1190 1200 1210 1220 1230 100 110 120 130 140 150 mKIAA0 YSGTHLVKFELWCGQPGVGPTLQEHLDDFFPLIHVYLQHRAQGSFMRPTGVSSAVTPVLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 YSGTHLVKFELWCGQPGVGPTLQEHLDDFFPLIHVYLQHRAQGSFMRPTGVSSAVTPVLK 1240 1250 1260 1270 1280 1290 160 170 180 190 200 210 mKIAA0 ALWRQVRDRFFHITGPSKDALHLEALAQLIPFARTKDLHVLMDHLPNTLRTLSNHKSWTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 ALWRQVRDRFFHITGPSKDALHLEALAQLIPFARTKDLHVLMDHLPNTLRTLSNHKSWTL 1300 1310 1320 1330 1340 1350 220 230 240 250 260 270 mKIAA0 ADSVSAALAESAEELGSWRKTLLRSCIQWLAVSFSGREPEDENTQEHEKAMLVRLSELLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 ADSVSAALAESAEELGSWRKTLLRSCIQWLAVSFSGREPEDENTQEHEKAMLVRLSELLH 1360 1370 1380 1390 1400 1410 280 290 300 310 320 330 mKIAA0 AVKEVDPGDWQQFVKTGLKFRYHDLTFLKTLLSATKLLYGPESSGRTKLVQLSVVHMMLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 AVKEVDPGDWQQFVKTGLKFRYHDLTFLKTLLSATKLLYGPESSGRTKLVQLSVVHMMLT 1420 1430 1440 1450 1460 1470 340 350 360 370 380 390 mKIAA0 QHSLFLPTMLSSEEEETPDSGVKETLLDLMSTVVRLCPSVCQSSHFAVLLGTYSATLSVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 QHSLFLPTMLSSEEEETPDSGVKETLLDLMSTVVRLCPSVCQSSHFAVLLGTYSATLSVL 1480 1490 1500 1510 1520 1530 400 410 420 430 440 450 mKIAA0 DQKILLLLRAYEQNNLSLISFRVLLWGPAAVEHHKTCRSLGKSLWQQPSVGDILRLLDPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 DQKILLLLRAYEQNNLSLISFRVLLWGPAAVEHHKTCRSLGKSLWQQPSVGDILRLLDPD 1540 1550 1560 1570 1580 1590 460 470 480 490 500 510 mKIAA0 RMMQTILHFPQYRKLLPTEDTGEPLVFKDKTARVDLDSLYDPCFLLHLFGELTRPEFVVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 RMMQTILHFPQYRKLLPTEDTGEPLVFKDKTARVDLDSLYDPCFLLHLFGELTRPEFVVD 1600 1610 1620 1630 1640 1650 520 530 540 550 560 570 mKIAA0 CRKFLDSNALGLTVAALSSYDPQMRAAAYYVLAAYYSHLEGARFREQSQVLYLLDVVRNG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 CRKFLDSNALGLTVAALSSYDPQMRAAAYYVLAAYYSHLEGARFREQSQVLYLLDVVRNG 1660 1670 1680 1690 1700 1710 580 590 600 610 620 630 mKIAA0 IRTPNLRLPFTVALFIAKAAVQILKPEEHMYWKISKFLLSHENLNMDKLPGFYQFFYSSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 IRTPNLRLPFTVALFIAKAAVQILKPEEHMYWKISKFLLSHENLNMDKLPGFYQFFYSSD 1720 1730 1740 1750 1760 1770 640 650 660 670 680 690 mKIAA0 FQQKTEQEWVLEILRQGIRDKHCYELCSRRGVFHIILSFFNSPLCDEVAQNWILEILQNV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 FQQKTEQEWVLEILRQGIRDKHCYELCSRRGVFHIILSFFNSPLCDEVAQNWILEILQNV 1780 1790 1800 1810 1820 1830 700 710 720 730 740 750 mKIAA0 AHITRSAYEVIRDYSLLTWVLHILESRFVETQLLSNVISLLHTLWVTNLGNKAPEERSQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 AHITRSAYEVIRDYSLLTWVLHILESRFVETQLLSNVISLLHTLWVTNLGNKAPEERSQP 1840 1850 1860 1870 1880 1890 760 770 780 790 800 810 mKIAA0 PGQVGSQESEKMLALHMVSEFLYVLIALTKHLRPTLASAQLMNFFWTLESVLSYRATIIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 PGQVGSQESEKMLALHMVSEFLYVLIALTKHLRPTLASAQLMNFFWTLESVLSYRATIIK 1900 1910 1920 1930 1940 1950 820 830 840 850 860 870 mKIAA0 LFKDMGRFTVNKVALSTKDVLILLHKWSLIERDTKLQGELKAVIEQHQAKDLMKMLKDKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 LFKDMGRFTVNKVALSTKDVLILLHKWSLIERDTKLQGELKAVIEQHQAKDLMKMLKDKS 1960 1970 1980 1990 2000 2010 880 890 900 910 920 930 mKIAA0 RPVVAAQARGPRGRKRRHGGLEETAEPQLEASCLEKCKDLLRATLTHWGPGDPLPGPTQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 RPVVAAQARGPRGRKRRHGGLEETAEPQLEASCLEKCKDLLRATLTHWGPGDPLPGPTQG 2020 2030 2040 2050 2060 2070 940 950 960 970 980 990 mKIAA0 SVGQTIPKSKTLSSAHAAVSLVASWVLRSLAERPVSRAEVTRLLDWLKSHILPQPMVVAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 SVGQTIPKSKTLSSAHAAVSLVASWVLRSLAERPVSRAEVTRLLDWLKSHILPQPMVVAD 2080 2090 2100 2110 2120 2130 1000 1010 1020 1030 1040 1050 mKIAA0 LLGDSAVKTGIFKLYNHHCSAQGLVGPAQDVACKFSTVMLQLLVAQGRKESPFHSVAEAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 LLGDSAVKTGIFKLYNHHCSAQGLVGPAQDVACKFSTVMLQLLVAQGRKESPFHSVAEAL 2140 2150 2160 2170 2180 2190 1060 1070 1080 1090 1100 1110 mKIAA0 CLDSLNEKEEAKRAPAAFLVSLYVKDMWLGAQQPDTFLAHIRMVCEAAKDVPLDEPEAIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|160 CLDSLNEKEEAKRAPAAFLVSLYVKDMWLGAQQPDTFLAHIRMVCEAAKDVPLDEPEAIV 2200 2210 2220 2230 2240 2250 1120 mKIAA0 VLCRNVDSSAQCLTRSR ::::::::::::::::: gi|160 VLCRNVDSSAQCLTRSR 2260 2270 >>gi|148671903|gb|EDL03850.1| mCG115615, isoform CRA_a [ (2297 aa) initn: 7429 init1: 7429 opt: 7429 Z-score: 8733.8 bits: 1628.9 E(): 0 Smith-Waterman score: 7429; 100.000% identity (100.000% similar) in 1127 aa overlap (1-1127:1171-2297) 10 20 30 mKIAA0 LSSLGKTLVQLLASSHQDQLQSSELLWCAE :::::::::::::::::::::::::::::: gi|148 IREVTLALLALPEAHLLTQQGTQSLGKERHLSSLGKTLVQLLASSHQDQLQSSELLWCAE 1150 1160 1170 1180 1190 1200 40 50 60 70 80 90 mKIAA0 YVRGLGALLPTLAEHELDTVFLQTLQKDPVLAPVVPEGVLEYCLARRTQTALGIASLLLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 YVRGLGALLPTLAEHELDTVFLQTLQKDPVLAPVVPEGVLEYCLARRTQTALGIASLLLQ 1210 1220 1230 1240 1250 1260 100 110 120 130 140 150 mKIAA0 YSGTHLVKFELWCGQPGVGPTLQEHLDDFFPLIHVYLQHRAQGSFMRPTGVSSAVTPVLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 YSGTHLVKFELWCGQPGVGPTLQEHLDDFFPLIHVYLQHRAQGSFMRPTGVSSAVTPVLK 1270 1280 1290 1300 1310 1320 160 170 180 190 200 210 mKIAA0 ALWRQVRDRFFHITGPSKDALHLEALAQLIPFARTKDLHVLMDHLPNTLRTLSNHKSWTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ALWRQVRDRFFHITGPSKDALHLEALAQLIPFARTKDLHVLMDHLPNTLRTLSNHKSWTL 1330 1340 1350 1360 1370 1380 220 230 240 250 260 270 mKIAA0 ADSVSAALAESAEELGSWRKTLLRSCIQWLAVSFSGREPEDENTQEHEKAMLVRLSELLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ADSVSAALAESAEELGSWRKTLLRSCIQWLAVSFSGREPEDENTQEHEKAMLVRLSELLH 1390 1400 1410 1420 1430 1440 280 290 300 310 320 330 mKIAA0 AVKEVDPGDWQQFVKTGLKFRYHDLTFLKTLLSATKLLYGPESSGRTKLVQLSVVHMMLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 AVKEVDPGDWQQFVKTGLKFRYHDLTFLKTLLSATKLLYGPESSGRTKLVQLSVVHMMLT 1450 1460 1470 1480 1490 1500 340 350 360 370 380 390 mKIAA0 QHSLFLPTMLSSEEEETPDSGVKETLLDLMSTVVRLCPSVCQSSHFAVLLGTYSATLSVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 QHSLFLPTMLSSEEEETPDSGVKETLLDLMSTVVRLCPSVCQSSHFAVLLGTYSATLSVL 1510 1520 1530 1540 1550 1560 400 410 420 430 440 450 mKIAA0 DQKILLLLRAYEQNNLSLISFRVLLWGPAAVEHHKTCRSLGKSLWQQPSVGDILRLLDPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 DQKILLLLRAYEQNNLSLISFRVLLWGPAAVEHHKTCRSLGKSLWQQPSVGDILRLLDPD 1570 1580 1590 1600 1610 1620 460 470 480 490 500 510 mKIAA0 RMMQTILHFPQYRKLLPTEDTGEPLVFKDKTARVDLDSLYDPCFLLHLFGELTRPEFVVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RMMQTILHFPQYRKLLPTEDTGEPLVFKDKTARVDLDSLYDPCFLLHLFGELTRPEFVVD 1630 1640 1650 1660 1670 1680 520 530 540 550 560 570 mKIAA0 CRKFLDSNALGLTVAALSSYDPQMRAAAYYVLAAYYSHLEGARFREQSQVLYLLDVVRNG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 CRKFLDSNALGLTVAALSSYDPQMRAAAYYVLAAYYSHLEGARFREQSQVLYLLDVVRNG 1690 1700 1710 1720 1730 1740 580 590 600 610 620 630 mKIAA0 IRTPNLRLPFTVALFIAKAAVQILKPEEHMYWKISKFLLSHENLNMDKLPGFYQFFYSSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 IRTPNLRLPFTVALFIAKAAVQILKPEEHMYWKISKFLLSHENLNMDKLPGFYQFFYSSD 1750 1760 1770 1780 1790 1800 640 650 660 670 680 690 mKIAA0 FQQKTEQEWVLEILRQGIRDKHCYELCSRRGVFHIILSFFNSPLCDEVAQNWILEILQNV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 FQQKTEQEWVLEILRQGIRDKHCYELCSRRGVFHIILSFFNSPLCDEVAQNWILEILQNV 1810 1820 1830 1840 1850 1860 700 710 720 730 740 750 mKIAA0 AHITRSAYEVIRDYSLLTWVLHILESRFVETQLLSNVISLLHTLWVTNLGNKAPEERSQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 AHITRSAYEVIRDYSLLTWVLHILESRFVETQLLSNVISLLHTLWVTNLGNKAPEERSQP 1870 1880 1890 1900 1910 1920 760 770 780 790 800 810 mKIAA0 PGQVGSQESEKMLALHMVSEFLYVLIALTKHLRPTLASAQLMNFFWTLESVLSYRATIIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PGQVGSQESEKMLALHMVSEFLYVLIALTKHLRPTLASAQLMNFFWTLESVLSYRATIIK 1930 1940 1950 1960 1970 1980 820 830 840 850 860 870 mKIAA0 LFKDMGRFTVNKVALSTKDVLILLHKWSLIERDTKLQGELKAVIEQHQAKDLMKMLKDKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LFKDMGRFTVNKVALSTKDVLILLHKWSLIERDTKLQGELKAVIEQHQAKDLMKMLKDKS 1990 2000 2010 2020 2030 2040 880 890 900 910 920 930 mKIAA0 RPVVAAQARGPRGRKRRHGGLEETAEPQLEASCLEKCKDLLRATLTHWGPGDPLPGPTQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RPVVAAQARGPRGRKRRHGGLEETAEPQLEASCLEKCKDLLRATLTHWGPGDPLPGPTQG 2050 2060 2070 2080 2090 2100 940 950 960 970 980 990 mKIAA0 SVGQTIPKSKTLSSAHAAVSLVASWVLRSLAERPVSRAEVTRLLDWLKSHILPQPMVVAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SVGQTIPKSKTLSSAHAAVSLVASWVLRSLAERPVSRAEVTRLLDWLKSHILPQPMVVAD 2110 2120 2130 2140 2150 2160 1000 1010 1020 1030 1040 1050 mKIAA0 LLGDSAVKTGIFKLYNHHCSAQGLVGPAQDVACKFSTVMLQLLVAQGRKESPFHSVAEAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LLGDSAVKTGIFKLYNHHCSAQGLVGPAQDVACKFSTVMLQLLVAQGRKESPFHSVAEAL 2170 2180 2190 2200 2210 2220 1060 1070 1080 1090 1100 1110 mKIAA0 CLDSLNEKEEAKRAPAAFLVSLYVKDMWLGAQQPDTFLAHIRMVCEAAKDVPLDEPEAIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 CLDSLNEKEEAKRAPAAFLVSLYVKDMWLGAQQPDTFLAHIRMVCEAAKDVPLDEPEAIV 2230 2240 2250 2260 2270 2280 1120 mKIAA0 VLCRNVDSSAQCLTRSR ::::::::::::::::: gi|148 VLCRNVDSSAQCLTRSR 2290 >>gi|149268228|ref|XP_909489.3| PREDICTED: similar to hC (2371 aa) initn: 7429 init1: 7429 opt: 7429 Z-score: 8733.7 bits: 1628.9 E(): 0 Smith-Waterman score: 7429; 100.000% identity (100.000% similar) in 1127 aa overlap (1-1127:1245-2371) 10 20 30 mKIAA0 LSSLGKTLVQLLASSHQDQLQSSELLWCAE :::::::::::::::::::::::::::::: gi|149 IREVTLALLALPEAHLLTQQGTQSLGKERHLSSLGKTLVQLLASSHQDQLQSSELLWCAE 1220 1230 1240 1250 1260 1270 40 50 60 70 80 90 mKIAA0 YVRGLGALLPTLAEHELDTVFLQTLQKDPVLAPVVPEGVLEYCLARRTQTALGIASLLLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 YVRGLGALLPTLAEHELDTVFLQTLQKDPVLAPVVPEGVLEYCLARRTQTALGIASLLLQ 1280 1290 1300 1310 1320 1330 100 110 120 130 140 150 mKIAA0 YSGTHLVKFELWCGQPGVGPTLQEHLDDFFPLIHVYLQHRAQGSFMRPTGVSSAVTPVLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 YSGTHLVKFELWCGQPGVGPTLQEHLDDFFPLIHVYLQHRAQGSFMRPTGVSSAVTPVLK 1340 1350 1360 1370 1380 1390 160 170 180 190 200 210 mKIAA0 ALWRQVRDRFFHITGPSKDALHLEALAQLIPFARTKDLHVLMDHLPNTLRTLSNHKSWTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 ALWRQVRDRFFHITGPSKDALHLEALAQLIPFARTKDLHVLMDHLPNTLRTLSNHKSWTL 1400 1410 1420 1430 1440 1450 220 230 240 250 260 270 mKIAA0 ADSVSAALAESAEELGSWRKTLLRSCIQWLAVSFSGREPEDENTQEHEKAMLVRLSELLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 ADSVSAALAESAEELGSWRKTLLRSCIQWLAVSFSGREPEDENTQEHEKAMLVRLSELLH 1460 1470 1480 1490 1500 1510 280 290 300 310 320 330 mKIAA0 AVKEVDPGDWQQFVKTGLKFRYHDLTFLKTLLSATKLLYGPESSGRTKLVQLSVVHMMLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 AVKEVDPGDWQQFVKTGLKFRYHDLTFLKTLLSATKLLYGPESSGRTKLVQLSVVHMMLT 1520 1530 1540 1550 1560 1570 340 350 360 370 380 390 mKIAA0 QHSLFLPTMLSSEEEETPDSGVKETLLDLMSTVVRLCPSVCQSSHFAVLLGTYSATLSVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 QHSLFLPTMLSSEEEETPDSGVKETLLDLMSTVVRLCPSVCQSSHFAVLLGTYSATLSVL 1580 1590 1600 1610 1620 1630 400 410 420 430 440 450 mKIAA0 DQKILLLLRAYEQNNLSLISFRVLLWGPAAVEHHKTCRSLGKSLWQQPSVGDILRLLDPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 DQKILLLLRAYEQNNLSLISFRVLLWGPAAVEHHKTCRSLGKSLWQQPSVGDILRLLDPD 1640 1650 1660 1670 1680 1690 460 470 480 490 500 510 mKIAA0 RMMQTILHFPQYRKLLPTEDTGEPLVFKDKTARVDLDSLYDPCFLLHLFGELTRPEFVVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 RMMQTILHFPQYRKLLPTEDTGEPLVFKDKTARVDLDSLYDPCFLLHLFGELTRPEFVVD 1700 1710 1720 1730 1740 1750 520 530 540 550 560 570 mKIAA0 CRKFLDSNALGLTVAALSSYDPQMRAAAYYVLAAYYSHLEGARFREQSQVLYLLDVVRNG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 CRKFLDSNALGLTVAALSSYDPQMRAAAYYVLAAYYSHLEGARFREQSQVLYLLDVVRNG 1760 1770 1780 1790 1800 1810 580 590 600 610 620 630 mKIAA0 IRTPNLRLPFTVALFIAKAAVQILKPEEHMYWKISKFLLSHENLNMDKLPGFYQFFYSSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 IRTPNLRLPFTVALFIAKAAVQILKPEEHMYWKISKFLLSHENLNMDKLPGFYQFFYSSD 1820 1830 1840 1850 1860 1870 640 650 660 670 680 690 mKIAA0 FQQKTEQEWVLEILRQGIRDKHCYELCSRRGVFHIILSFFNSPLCDEVAQNWILEILQNV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 FQQKTEQEWVLEILRQGIRDKHCYELCSRRGVFHIILSFFNSPLCDEVAQNWILEILQNV 1880 1890 1900 1910 1920 1930 700 710 720 730 740 750 mKIAA0 AHITRSAYEVIRDYSLLTWVLHILESRFVETQLLSNVISLLHTLWVTNLGNKAPEERSQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 AHITRSAYEVIRDYSLLTWVLHILESRFVETQLLSNVISLLHTLWVTNLGNKAPEERSQP 1940 1950 1960 1970 1980 1990 760 770 780 790 800 810 mKIAA0 PGQVGSQESEKMLALHMVSEFLYVLIALTKHLRPTLASAQLMNFFWTLESVLSYRATIIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 PGQVGSQESEKMLALHMVSEFLYVLIALTKHLRPTLASAQLMNFFWTLESVLSYRATIIK 2000 2010 2020 2030 2040 2050 820 830 840 850 860 870 mKIAA0 LFKDMGRFTVNKVALSTKDVLILLHKWSLIERDTKLQGELKAVIEQHQAKDLMKMLKDKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LFKDMGRFTVNKVALSTKDVLILLHKWSLIERDTKLQGELKAVIEQHQAKDLMKMLKDKS 2060 2070 2080 2090 2100 2110 880 890 900 910 920 930 mKIAA0 RPVVAAQARGPRGRKRRHGGLEETAEPQLEASCLEKCKDLLRATLTHWGPGDPLPGPTQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 RPVVAAQARGPRGRKRRHGGLEETAEPQLEASCLEKCKDLLRATLTHWGPGDPLPGPTQG 2120 2130 2140 2150 2160 2170 940 950 960 970 980 990 mKIAA0 SVGQTIPKSKTLSSAHAAVSLVASWVLRSLAERPVSRAEVTRLLDWLKSHILPQPMVVAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SVGQTIPKSKTLSSAHAAVSLVASWVLRSLAERPVSRAEVTRLLDWLKSHILPQPMVVAD 2180 2190 2200 2210 2220 2230 1000 1010 1020 1030 1040 1050 mKIAA0 LLGDSAVKTGIFKLYNHHCSAQGLVGPAQDVACKFSTVMLQLLVAQGRKESPFHSVAEAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LLGDSAVKTGIFKLYNHHCSAQGLVGPAQDVACKFSTVMLQLLVAQGRKESPFHSVAEAL 2240 2250 2260 2270 2280 2290 1060 1070 1080 1090 1100 1110 mKIAA0 CLDSLNEKEEAKRAPAAFLVSLYVKDMWLGAQQPDTFLAHIRMVCEAAKDVPLDEPEAIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 CLDSLNEKEEAKRAPAAFLVSLYVKDMWLGAQQPDTFLAHIRMVCEAAKDVPLDEPEAIV 2300 2310 2320 2330 2340 2350 1120 mKIAA0 VLCRNVDSSAQCLTRSR ::::::::::::::::: gi|149 VLCRNVDSSAQCLTRSR 2360 2370 >>gi|149268186|ref|XP_489612.5| PREDICTED: hypothetical (2378 aa) initn: 7429 init1: 7429 opt: 7429 Z-score: 8733.6 bits: 1628.9 E(): 0 Smith-Waterman score: 7429; 100.000% identity (100.000% similar) in 1127 aa overlap (1-1127:1252-2378) 10 20 30 mKIAA0 LSSLGKTLVQLLASSHQDQLQSSELLWCAE :::::::::::::::::::::::::::::: gi|149 IREVTLALLALPEAHLLTQQGTQSLGKERHLSSLGKTLVQLLASSHQDQLQSSELLWCAE 1230 1240 1250 1260 1270 1280 40 50 60 70 80 90 mKIAA0 YVRGLGALLPTLAEHELDTVFLQTLQKDPVLAPVVPEGVLEYCLARRTQTALGIASLLLQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 YVRGLGALLPTLAEHELDTVFLQTLQKDPVLAPVVPEGVLEYCLARRTQTALGIASLLLQ 1290 1300 1310 1320 1330 1340 100 110 120 130 140 150 mKIAA0 YSGTHLVKFELWCGQPGVGPTLQEHLDDFFPLIHVYLQHRAQGSFMRPTGVSSAVTPVLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 YSGTHLVKFELWCGQPGVGPTLQEHLDDFFPLIHVYLQHRAQGSFMRPTGVSSAVTPVLK 1350 1360 1370 1380 1390 1400 160 170 180 190 200 210 mKIAA0 ALWRQVRDRFFHITGPSKDALHLEALAQLIPFARTKDLHVLMDHLPNTLRTLSNHKSWTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 ALWRQVRDRFFHITGPSKDALHLEALAQLIPFARTKDLHVLMDHLPNTLRTLSNHKSWTL 1410 1420 1430 1440 1450 1460 220 230 240 250 260 270 mKIAA0 ADSVSAALAESAEELGSWRKTLLRSCIQWLAVSFSGREPEDENTQEHEKAMLVRLSELLH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 ADSVSAALAESAEELGSWRKTLLRSCIQWLAVSFSGREPEDENTQEHEKAMLVRLSELLH 1470 1480 1490 1500 1510 1520 280 290 300 310 320 330 mKIAA0 AVKEVDPGDWQQFVKTGLKFRYHDLTFLKTLLSATKLLYGPESSGRTKLVQLSVVHMMLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 AVKEVDPGDWQQFVKTGLKFRYHDLTFLKTLLSATKLLYGPESSGRTKLVQLSVVHMMLT 1530 1540 1550 1560 1570 1580 340 350 360 370 380 390 mKIAA0 QHSLFLPTMLSSEEEETPDSGVKETLLDLMSTVVRLCPSVCQSSHFAVLLGTYSATLSVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 QHSLFLPTMLSSEEEETPDSGVKETLLDLMSTVVRLCPSVCQSSHFAVLLGTYSATLSVL 1590 1600 1610 1620 1630 1640 400 410 420 430 440 450 mKIAA0 DQKILLLLRAYEQNNLSLISFRVLLWGPAAVEHHKTCRSLGKSLWQQPSVGDILRLLDPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 DQKILLLLRAYEQNNLSLISFRVLLWGPAAVEHHKTCRSLGKSLWQQPSVGDILRLLDPD 1650 1660 1670 1680 1690 1700 460 470 480 490 500 510 mKIAA0 RMMQTILHFPQYRKLLPTEDTGEPLVFKDKTARVDLDSLYDPCFLLHLFGELTRPEFVVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 RMMQTILHFPQYRKLLPTEDTGEPLVFKDKTARVDLDSLYDPCFLLHLFGELTRPEFVVD 1710 1720 1730 1740 1750 1760 520 530 540 550 560 570 mKIAA0 CRKFLDSNALGLTVAALSSYDPQMRAAAYYVLAAYYSHLEGARFREQSQVLYLLDVVRNG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 CRKFLDSNALGLTVAALSSYDPQMRAAAYYVLAAYYSHLEGARFREQSQVLYLLDVVRNG 1770 1780 1790 1800 1810 1820 580 590 600 610 620 630 mKIAA0 IRTPNLRLPFTVALFIAKAAVQILKPEEHMYWKISKFLLSHENLNMDKLPGFYQFFYSSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 IRTPNLRLPFTVALFIAKAAVQILKPEEHMYWKISKFLLSHENLNMDKLPGFYQFFYSSD 1830 1840 1850 1860 1870 1880 640 650 660 670 680 690 mKIAA0 FQQKTEQEWVLEILRQGIRDKHCYELCSRRGVFHIILSFFNSPLCDEVAQNWILEILQNV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 FQQKTEQEWVLEILRQGIRDKHCYELCSRRGVFHIILSFFNSPLCDEVAQNWILEILQNV 1890 1900 1910 1920 1930 1940 700 710 720 730 740 750 mKIAA0 AHITRSAYEVIRDYSLLTWVLHILESRFVETQLLSNVISLLHTLWVTNLGNKAPEERSQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 AHITRSAYEVIRDYSLLTWVLHILESRFVETQLLSNVISLLHTLWVTNLGNKAPEERSQP 1950 1960 1970 1980 1990 2000 760 770 780 790 800 810 mKIAA0 PGQVGSQESEKMLALHMVSEFLYVLIALTKHLRPTLASAQLMNFFWTLESVLSYRATIIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 PGQVGSQESEKMLALHMVSEFLYVLIALTKHLRPTLASAQLMNFFWTLESVLSYRATIIK 2010 2020 2030 2040 2050 2060 820 830 840 850 860 870 mKIAA0 LFKDMGRFTVNKVALSTKDVLILLHKWSLIERDTKLQGELKAVIEQHQAKDLMKMLKDKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LFKDMGRFTVNKVALSTKDVLILLHKWSLIERDTKLQGELKAVIEQHQAKDLMKMLKDKS 2070 2080 2090 2100 2110 2120 880 890 900 910 920 930 mKIAA0 RPVVAAQARGPRGRKRRHGGLEETAEPQLEASCLEKCKDLLRATLTHWGPGDPLPGPTQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 RPVVAAQARGPRGRKRRHGGLEETAEPQLEASCLEKCKDLLRATLTHWGPGDPLPGPTQG 2130 2140 2150 2160 2170 2180 940 950 960 970 980 990 mKIAA0 SVGQTIPKSKTLSSAHAAVSLVASWVLRSLAERPVSRAEVTRLLDWLKSHILPQPMVVAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SVGQTIPKSKTLSSAHAAVSLVASWVLRSLAERPVSRAEVTRLLDWLKSHILPQPMVVAD 2190 2200 2210 2220 2230 2240 1000 1010 1020 1030 1040 1050 mKIAA0 LLGDSAVKTGIFKLYNHHCSAQGLVGPAQDVACKFSTVMLQLLVAQGRKESPFHSVAEAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LLGDSAVKTGIFKLYNHHCSAQGLVGPAQDVACKFSTVMLQLLVAQGRKESPFHSVAEAL 2250 2260 2270 2280 2290 2300 1060 1070 1080 1090 1100 1110 mKIAA0 CLDSLNEKEEAKRAPAAFLVSLYVKDMWLGAQQPDTFLAHIRMVCEAAKDVPLDEPEAIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 CLDSLNEKEEAKRAPAAFLVSLYVKDMWLGAQQPDTFLAHIRMVCEAAKDVPLDEPEAIV 2310 2320 2330 2340 2350 2360 1120 mKIAA0 VLCRNVDSSAQCLTRSR ::::::::::::::::: gi|149 VLCRNVDSSAQCLTRSR 2370 >>gi|149059811|gb|EDM10694.1| rCG58772, isoform CRA_a [R (1614 aa) initn: 6698 init1: 5359 opt: 6686 Z-score: 7861.1 bits: 1466.9 E(): 0 Smith-Waterman score: 6686; 89.618% identity (96.717% similar) in 1127 aa overlap (1-1126:487-1613) 10 20 30 mKIAA0 LSSLGKTLVQLLASSHQDQLQSSELLWCAE ::::::::::::.::::..::::::::::: gi|149 IREVTLALLGLPEAHLLTQQGTQCPGKERQLSSLGKTLVQLLTSSHQNRLQSSELLWCAE 460 470 480 490 500 510 40 50 60 70 80 90 mKIAA0 YVRGLGALLPTLAEHELDTVFLQTLQKDPVLAPVVPEGVLEYCLARRTQTALGIASLLLQ ::::::::::::::.::::::::::::::::::::: .:::::.:::..:: ::::::: gi|149 YVRGLGALLPTLAEQELDTVFLQTLQKDPVLAPVVPADLLEYCLVRRTKAALDIASLLLQ 520 530 540 550 560 570 100 110 120 130 140 150 mKIAA0 YSGTHLVKFELWCGQPGVGPTLQEHLDDFFPLIHVYLQHRAQGSFMRPTGVSSAVTPVLK ::.:::.:::::::::::::.::::::::::::::::::: :::::::: :::::::::. gi|149 YSSTHLLKFELWCGQPGVGPSLQEHLDDFFPLIHVYLQHRMQGSFMRPTEVSSAVTPVLR 580 590 600 610 620 630 160 170 180 190 200 210 mKIAA0 ALWRQVRDRFFHITGPSKDALHLEALAQLIPFARTKDLHVLMDHLPNTLRTLSNHKSWTL :::::::::::::.:::: :::::::::::::::::::.:::::::: :::::::::: . gi|149 ALWRQVRDRFFHIAGPSKHALHLEALAQLIPFARTKDLRVLMDHLPNLLRTLSNHKSWIV 640 650 660 670 680 690 220 230 240 250 260 270 mKIAA0 ADSVSAALAESAEELGSWRKTLLRSCIQWLAVSFSGREPEDENTQEHEKAMLVRLSELLH :::::::::::::::.::::::::::::::::::::::::.:::::.::.::.::::::: gi|149 ADSVSAALAESAEELASWRKTLLRSCIQWLAVSFSGREPENENTQEQEKTMLLRLSELLH 700 710 720 730 740 750 280 290 300 310 320 330 mKIAA0 AVKEVDPGDWQQFVKTGLKFRYHDLTFLKTLLSATKLLYGPESSGRTKLVQLSVVHMMLT ::::::::::::::::::::::.:::::.:::.::::::.:::::.::::::::.::::: gi|149 AVKEVDPGDWQQFVKTGLKFRYQDLTFLRTLLDATKLLYSPESSGHTKLVQLSVMHMMLT 760 770 780 790 800 810 340 350 360 370 380 390 mKIAA0 QHSLFLPTMLSSEEEETPDSGVKETLLDLMSTVVRLCPSVCQSSHFAVLLGTYSATLSVL ::::::::::.:.::::::: ::::::::::::::.:::::.::::::::::::::::.: gi|149 QHSLFLPTMLTSKEEETPDSPVKETLLDLMSTVVRMCPSVCESSHFAVLLGTYSATLSIL 820 830 840 850 860 870 400 410 420 430 440 450 mKIAA0 DQKILLLLRAYEQNNLSLISFRVLLWGPAAVEHHKTCRSLGKSLWQQPSVGDILRLLDPD :::::::::::::..::::::::::::::::::::::::::::::::::::::::::::: gi|149 DQKILLLLRAYEQHSLSLISFRVLLWGPAAVEHHKTCRSLGKSLWQQPSVGDILRLLDPD 880 890 900 910 920 930 460 470 480 490 500 510 mKIAA0 RMMQTILHFPQYRKLLPTEDTGEPLVFKDKTARVDLDSLYDPCFLLHLFGELTRPEFVVD :::::::::::::.:: ::::::: :::::::::::..:::::::::::::::::::::: gi|149 RMMQTILHFPQYRRLLHTEDTGEPQVFKDKTARVDLSGLYDPCFLLHLFGELTRPEFVVD 940 950 960 970 980 990 520 530 540 550 560 570 mKIAA0 CRKFLDSNALGLTVAALSSYDPQMRAAAYYVLAAYYSHLEGARFREQSQVLYLLDVVRNG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 CRKFLDSNALGLTVAALSSYDPQMRAAAYYVLAAYYSHLEGARFREQSQVLYLLDVVRNG 1000 1010 1020 1030 1040 1050 580 590 600 610 620 630 mKIAA0 IRTPNLRLPFTVALFIAKAAVQILKPEEHMYWKISKFLLSHENLNMDKLPGFYQFFYSSD :..:::::::::::::::::.:::.:::::::::::::::::::::.::::::::::::: gi|149 IQAPNLRLPFTVALFIAKAAAQILRPEEHMYWKISKFLLSHENLNMNKLPGFYQFFYSSD 1060 1070 1080 1090 1100 1110 640 650 660 670 680 690 mKIAA0 FQQKTEQEWVLEILRQGIRDKHCYELCSRRGVFHIILSFFNSPLCDEVAQNWILEILQNV ::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::: gi|149 FQQKTEQEWVLEILRQGIRDKHCYELCSRRGVFHIILSFFSSPLCDEVAQNWILEILQNV 1120 1130 1140 1150 1160 1170 700 710 720 730 740 750 mKIAA0 AHITRSAYEVIRDYSLLTWVLHILESRFVETQLLSNVISLLHTLWVTNLGNKAPEERSQP ::: :::::::::::::::.::::::::.:::::::::::::::::::::..: ::::: gi|149 AHIPRSAYEVIRDYSLLTWILHILESRFIETQLLSNVISLLHTLWVTNLGSRAAEERSQL 1180 1190 1200 1210 1220 1230 760 770 780 790 800 810 mKIAA0 PGQVGSQESEKMLALHMVSEFLYVLIALTKHLRPTLASAQLMNFFWTLESVLSYRATIIK : :. .:::: ::::::.::::::.::::::::::::.:::.::::::::::::::.:: gi|149 PCQTDCHESEKTLALHMVNEFLYVLVALTKHLRPTLASTQLMDFFWTLESVLSYRATVIK 1240 1250 1260 1270 1280 1290 820 830 840 850 860 870 mKIAA0 LFKDMGRFTVNKVALSTKDVLILLHKWSLIERDTKLQGELKAVIEQHQAKDLMKMLKDKS .::::::::::.:.:::::::.::::::::::::::::::::.:::::::::::::::: gi|149 IFKDMGRFTVNQVTLSTKDVLVLLHKWSLIERDTKLQGELKAIIEQHQAKDLMKMLKDKH 1300 1310 1320 1330 1340 1350 880 890 900 910 920 mKIAA0 RPVVAAQARGPRGR-KRRHGGLEETAEPQLEASCLEKCKDLLRATLTHWGPGDPLPGPTQ ::. ::.:.::::: :::. ::::::::::: :::::::::::::::::. ::::::: gi|149 RPLGAARAKGPRGREKRRREREEETAEPQLEASTLEKCKDLLRATLTHWGPAVPLPGPTQ 1360 1370 1380 1390 1400 1410 930 940 950 960 970 980 mKIAA0 GSVGQTIPKSKTLSSAHAAVSLVASWVLRSLAERPVSRAEVTRLLDWLKSHILPQPMVVA ::::.:::::.:.::::::::::.::::::::::.:::::::::::::::::::::::: gi|149 ESVGQAIPKSKALGSAHAAVSLVAGWVLRSLAERPLSRAEVTRLLDWLKSHILPQPMVVA 1420 1430 1440 1450 1460 1470 990 1000 1010 1020 1030 1040 mKIAA0 DLLGDSAVKTGIFKLYNHHCSAQGLVGPAQDVACKFSTVMLQLLVAQGRKESPFHSVAEA ::: ::::::::::::..::.:::::::::::::::: ::::::::::: ::::::::: gi|149 DLLRDSAVKTGIFKLYSRHCNAQGLVGPAQDVACKFSMVMLQLLVAQGRTPSPFHSVAEA 1480 1490 1500 1510 1520 1530 1050 1060 1070 1080 1090 1100 mKIAA0 LCLDSLNEKEEAKRAPAAFLVSLYVKDMWLGAQQPDTFLAHIRMVCEAAKDVPLDEPEAI :::::::::.::::::::::::::.::.::::::::::::::. ::::.::. : : ::. gi|149 LCLDSLNEKDEAKRAPAAFLVSLYIKDIWLGAQQPDTFLAHIQTVCEASKDMALGESEAL 1540 1550 1560 1570 1580 1590 1110 1120 mKIAA0 VVLCRNVDSSAQCLTRSR :::::.: :::: ::.: gi|149 VVLCRDVGSSAQSLTHSC 1600 1610 >>gi|109492918|ref|XP_221669.4| PREDICTED: similar to Nu (2317 aa) initn: 6698 init1: 5359 opt: 6686 Z-score: 7858.9 bits: 1467.1 E(): 0 Smith-Waterman score: 6686; 89.618% identity (96.717% similar) in 1127 aa overlap (1-1126:1190-2316) 10 20 30 mKIAA0 LSSLGKTLVQLLASSHQDQLQSSELLWCAE ::::::::::::.::::..::::::::::: gi|109 IREVTLALLGLPEAHLLTQQGTQCPGKERQLSSLGKTLVQLLTSSHQNRLQSSELLWCAE 1160 1170 1180 1190 1200 1210 40 50 60 70 80 90 mKIAA0 YVRGLGALLPTLAEHELDTVFLQTLQKDPVLAPVVPEGVLEYCLARRTQTALGIASLLLQ ::::::::::::::.::::::::::::::::::::: .:::::.:::..:: ::::::: gi|109 YVRGLGALLPTLAEQELDTVFLQTLQKDPVLAPVVPADLLEYCLVRRTKAALDIASLLLQ 1220 1230 1240 1250 1260 1270 100 110 120 130 140 150 mKIAA0 YSGTHLVKFELWCGQPGVGPTLQEHLDDFFPLIHVYLQHRAQGSFMRPTGVSSAVTPVLK ::.:::.:::::::::::::.::::::::::::::::::: :::::::: :::::::::. gi|109 YSSTHLLKFELWCGQPGVGPSLQEHLDDFFPLIHVYLQHRMQGSFMRPTEVSSAVTPVLR 1280 1290 1300 1310 1320 1330 160 170 180 190 200 210 mKIAA0 ALWRQVRDRFFHITGPSKDALHLEALAQLIPFARTKDLHVLMDHLPNTLRTLSNHKSWTL :::::::::::::.:::: :::::::::::::::::::.:::::::: :::::::::: . gi|109 ALWRQVRDRFFHIAGPSKHALHLEALAQLIPFARTKDLRVLMDHLPNLLRTLSNHKSWIV 1340 1350 1360 1370 1380 1390 220 230 240 250 260 270 mKIAA0 ADSVSAALAESAEELGSWRKTLLRSCIQWLAVSFSGREPEDENTQEHEKAMLVRLSELLH :::::::::::::::.::::::::::::::::::::::::.:::::.::.::.::::::: gi|109 ADSVSAALAESAEELASWRKTLLRSCIQWLAVSFSGREPENENTQEQEKTMLLRLSELLH 1400 1410 1420 1430 1440 1450 280 290 300 310 320 330 mKIAA0 AVKEVDPGDWQQFVKTGLKFRYHDLTFLKTLLSATKLLYGPESSGRTKLVQLSVVHMMLT ::::::::::::::::::::::.:::::.:::.::::::.:::::.::::::::.::::: gi|109 AVKEVDPGDWQQFVKTGLKFRYQDLTFLRTLLDATKLLYSPESSGHTKLVQLSVMHMMLT 1460 1470 1480 1490 1500 1510 340 350 360 370 380 390 mKIAA0 QHSLFLPTMLSSEEEETPDSGVKETLLDLMSTVVRLCPSVCQSSHFAVLLGTYSATLSVL ::::::::::.:.::::::: ::::::::::::::.:::::.::::::::::::::::.: gi|109 QHSLFLPTMLTSKEEETPDSPVKETLLDLMSTVVRMCPSVCESSHFAVLLGTYSATLSIL 1520 1530 1540 1550 1560 1570 400 410 420 430 440 450 mKIAA0 DQKILLLLRAYEQNNLSLISFRVLLWGPAAVEHHKTCRSLGKSLWQQPSVGDILRLLDPD :::::::::::::..::::::::::::::::::::::::::::::::::::::::::::: gi|109 DQKILLLLRAYEQHSLSLISFRVLLWGPAAVEHHKTCRSLGKSLWQQPSVGDILRLLDPD 1580 1590 1600 1610 1620 1630 460 470 480 490 500 510 mKIAA0 RMMQTILHFPQYRKLLPTEDTGEPLVFKDKTARVDLDSLYDPCFLLHLFGELTRPEFVVD :::::::::::::.:: ::::::: :::::::::::..:::::::::::::::::::::: gi|109 RMMQTILHFPQYRRLLHTEDTGEPQVFKDKTARVDLSGLYDPCFLLHLFGELTRPEFVVD 1640 1650 1660 1670 1680 1690 520 530 540 550 560 570 mKIAA0 CRKFLDSNALGLTVAALSSYDPQMRAAAYYVLAAYYSHLEGARFREQSQVLYLLDVVRNG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 CRKFLDSNALGLTVAALSSYDPQMRAAAYYVLAAYYSHLEGARFREQSQVLYLLDVVRNG 1700 1710 1720 1730 1740 1750 580 590 600 610 620 630 mKIAA0 IRTPNLRLPFTVALFIAKAAVQILKPEEHMYWKISKFLLSHENLNMDKLPGFYQFFYSSD :..:::::::::::::::::.:::.:::::::::::::::::::::.::::::::::::: gi|109 IQAPNLRLPFTVALFIAKAAAQILRPEEHMYWKISKFLLSHENLNMNKLPGFYQFFYSSD 1760 1770 1780 1790 1800 1810 640 650 660 670 680 690 mKIAA0 FQQKTEQEWVLEILRQGIRDKHCYELCSRRGVFHIILSFFNSPLCDEVAQNWILEILQNV ::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::: gi|109 FQQKTEQEWVLEILRQGIRDKHCYELCSRRGVFHIILSFFSSPLCDEVAQNWILEILQNV 1820 1830 1840 1850 1860 1870 700 710 720 730 740 750 mKIAA0 AHITRSAYEVIRDYSLLTWVLHILESRFVETQLLSNVISLLHTLWVTNLGNKAPEERSQP ::: :::::::::::::::.::::::::.:::::::::::::::::::::..: ::::: gi|109 AHIPRSAYEVIRDYSLLTWILHILESRFIETQLLSNVISLLHTLWVTNLGSRAAEERSQL 1880 1890 1900 1910 1920 1930 760 770 780 790 800 810 mKIAA0 PGQVGSQESEKMLALHMVSEFLYVLIALTKHLRPTLASAQLMNFFWTLESVLSYRATIIK : :. .:::: ::::::.::::::.::::::::::::.:::.::::::::::::::.:: gi|109 PCQTDCHESEKTLALHMVNEFLYVLVALTKHLRPTLASTQLMDFFWTLESVLSYRATVIK 1940 1950 1960 1970 1980 1990 820 830 840 850 860 870 mKIAA0 LFKDMGRFTVNKVALSTKDVLILLHKWSLIERDTKLQGELKAVIEQHQAKDLMKMLKDKS .::::::::::.:.:::::::.::::::::::::::::::::.:::::::::::::::: gi|109 IFKDMGRFTVNQVTLSTKDVLVLLHKWSLIERDTKLQGELKAIIEQHQAKDLMKMLKDKH 2000 2010 2020 2030 2040 2050 880 890 900 910 920 mKIAA0 RPVVAAQARGPRGR-KRRHGGLEETAEPQLEASCLEKCKDLLRATLTHWGPGDPLPGPTQ ::. ::.:.::::: :::. ::::::::::: :::::::::::::::::. ::::::: gi|109 RPLGAARAKGPRGREKRRREREEETAEPQLEASTLEKCKDLLRATLTHWGPAVPLPGPTQ 2060 2070 2080 2090 2100 2110 930 940 950 960 970 980 mKIAA0 GSVGQTIPKSKTLSSAHAAVSLVASWVLRSLAERPVSRAEVTRLLDWLKSHILPQPMVVA ::::.:::::.:.::::::::::.::::::::::.:::::::::::::::::::::::: gi|109 ESVGQAIPKSKALGSAHAAVSLVAGWVLRSLAERPLSRAEVTRLLDWLKSHILPQPMVVA 2120 2130 2140 2150 2160 2170 990 1000 1010 1020 1030 1040 mKIAA0 DLLGDSAVKTGIFKLYNHHCSAQGLVGPAQDVACKFSTVMLQLLVAQGRKESPFHSVAEA ::: ::::::::::::..::.:::::::::::::::: ::::::::::: ::::::::: gi|109 DLLRDSAVKTGIFKLYSRHCNAQGLVGPAQDVACKFSMVMLQLLVAQGRTPSPFHSVAEA 2180 2190 2200 2210 2220 2230 1050 1060 1070 1080 1090 1100 mKIAA0 LCLDSLNEKEEAKRAPAAFLVSLYVKDMWLGAQQPDTFLAHIRMVCEAAKDVPLDEPEAI :::::::::.::::::::::::::.::.::::::::::::::. ::::.::. : : ::. gi|109 LCLDSLNEKDEAKRAPAAFLVSLYIKDIWLGAQQPDTFLAHIQTVCEASKDMALGESEAL 2240 2250 2260 2270 2280 2290 1110 1120 mKIAA0 VVLCRNVDSSAQCLTRSR :::::.: :::: ::.: gi|109 VVLCRDVGSSAQSLTHSC 2300 2310 >>gi|114684339|ref|XP_531425.2| PREDICTED: nucleolar pre (2439 aa) initn: 4674 init1: 3107 opt: 5358 Z-score: 6295.0 bits: 1177.8 E(): 0 Smith-Waterman score: 5358; 72.525% identity (89.295% similar) in 1121 aa overlap (1-1120:1318-2436) 10 20 30 mKIAA0 LSSLGKTLVQLLASSHQDQLQSSELLWCAE :..:::::::::. : ::::::.:::: .: gi|114 LREVTLALLSLPETHLVTQQPTKSPGKERHLNALGKTLVQLLTCSPQDQLQSGELLWSSE 1290 1300 1310 1320 1330 1340 40 50 60 70 80 90 mKIAA0 YVRGLGALLPTLAEHELDTVFLQTLQKDPVLAPVVPEGVLEYCLARRTQTALGIASLLLQ ::::::::::::: :::::.:.:::.::::::.: .:.::::::::.::.::.:::: gi|114 YVRGLGALLPTLAVDELDTVLLHTLQRDPVLAPAVGADLLDYCLARRTQAALSIAALLLQ 1350 1360 1370 1380 1390 1400 100 110 120 130 140 mKIAA0 YSGTHLVKFELWCGQPGVGPTLQEHLDDFFPLIHVYLQHRAQGSFMRPTGVSSAVTPVL- : :::. :: :: : : : :: ::::.:::::::: :.:. : ::.:::::: ::: gi|114 ESCTHLLWFEQWCLQAGPGLGLQGDLDDFLPLIHVYLQCRTQSHFTRPAGVSSAVIPVLR 1410 1420 1430 1440 1450 1460 150 160 170 180 190 200 mKIAA0 KALWRQVRDRFFHITGPSKDALHLEALAQLIPFARTKDLHVLMDHLPNTLRTLSNHKSWT :.::::...:.. .: ..:. : ::::.::::.::: ::::.::. :.: :.:: : gi|114 KTLWRQLQSRLLSTDSPPASGLYQEILAQLVPFARAKDLSVLMDRLPSLLHTPSSHKRWI 1470 1480 1490 1500 1510 1520 210 220 230 240 250 260 mKIAA0 LADSVSAALAESAEELGSWRKTLLRSCIQWLAVSFSGREPEDENTQEHEKAMLVRLSELL .:::.:::: ::::: .::.:::.::..:: ::::: . .:.:::..:: ::.::. :: gi|114 VADSISAALEGSAEELCAWRRTLLESCVKWLIVSFSGGQQDDDNTQNQEKEMLLRLNALL 1530 1540 1550 1560 1570 1580 270 280 290 300 310 320 mKIAA0 HAVKEVDPGDWQQFVKTGLKFRYHDLTFLKTLLSATKLLYGPESSGRTKLVQLSVVHMML ::..::::::::.::::::::::.: :::::::.:..:::.:::: ::::.:: ::..:: gi|114 HALNEVDPGDWQKFVKTGLKFRYQDHTFLKTLLTAVQLLYSPESSVRTKLIQLPVVYVML 1590 1600 1610 1620 1630 1640 330 340 350 360 370 380 mKIAA0 TQHSLFLPTMLSSEEEETPDSGVKETLLDLMSTVVRLCPSVCQSSHFAVLLGTYSATLSV ::::::::.:.:. ::.::: :::.:.::: :::..:::::.:::::::::.:.::::: gi|114 MQHSLFLPTLLTSDGEESPDSQVKEALVDLMLTVVEMCPSVCESSHFAVLLGAYGATLSV 1650 1660 1670 1680 1690 1700 390 400 410 420 430 440 mKIAA0 LDQKILLLLRAYEQNNLSLISFRVLLWGPAAVEHHKTCRSLGKSLWQQPSVGDILRLLDP ::::::::::.::::.::::.:::::::::::::::::::::.:::::::::::::::: gi|114 LDQKILLLLRVYEQNKLSLINFRVLLWGPAAVEHHKTCRSLGRSLWQQPSVGDILRLLDR 1710 1720 1730 1740 1750 1760 450 460 470 480 490 500 mKIAA0 DRMMQTILHFPQYRKLLPTEDTGEPLVFKDKTARVDLDSLYDPCFLLHLFGELTRPEFVV :.:::::::::: :.::: ::: : :.::::. :::::.::::::::.::.::::::::: gi|114 DQMMQTILHFPQNRRLLPPEDTQE-LIFKDKS-RVDLDGLYDPCFLLQLFSELTRPEFVV 1770 1780 1790 1800 1810 1820 510 520 530 540 550 560 mKIAA0 DCRKFLDSNALGLTVAALSSYDPQMRAAAYYVLAAYYSHLEGARFREQSQVLYLLDVVRN :::::::::::::::.::::::::::: ::.::::::::::::::.::::.::::::::: gi|114 DCRKFLDSNALGLTVTALSSYDPQMRAIAYHVLAAYYSHLEGARFQEQSQLLYLLDVVRN 1830 1840 1850 1860 1870 1880 570 580 590 600 610 620 mKIAA0 GIRTPNLRLPFTVALFIAKAAVQILKPEEHMYWKISKFLLSHENLNMDKLPGFYQFFYSS :::: ..:: ::.::::::::.:::::::::: :.:.:::::: :::::.:::::::::: gi|114 GIRTQDMRLTFTLALFIAKAALQILKPEEHMYLKVSNFLLSHEYLNMDKVPGFYQFFYSS 1890 1900 1910 1920 1930 1940 630 640 650 660 670 680 mKIAA0 DFQQKTEQEWVLEILRQGIRDKHCYELCSRRGVFHIILSFFNSPLCDEVAQNWILEILQN ::.:::::.::. .::::::::.:::::.:::.::::::::.::::::.::::::::::: gi|114 DFEQKTEQKWVFGLLRQGIRDKQCYELCARRGIFHIILSFFHSPLCDEAAQNWILEILQN 1950 1960 1970 1980 1990 2000 690 700 710 720 730 740 mKIAA0 VAHITRSAYEVIRDYSLLTWVLHILESRFVETQLLSNVISLLHTLWVTNLGNKAPEERSQ .:...:::::.:::::::::.::::::.:.:: ::::::::::::::::::.:: : :: gi|114 AAQVARSAYEIIRDYSLLTWILHILESKFLETPLLSNVISLLHTLWVTNLGDKAVEWDSQ 2010 2020 2030 2040 2050 2060 750 760 770 780 790 800 mKIAA0 PPGQVGSQESEKMLALHMVSEFLYVLIALTKHLRPTLASAQLMNFFWTLESVLSYRATII : : .::: : ::::.:.:::::::.: :::::::: .:: ::: ::.::: ::::.: gi|114 RPCQPSSQEPAKRLALHLVNEFLYVLIVLMKHLRPTLAPVQLTNFFGTLDSVLRYRATVI 2070 2080 2090 2100 2110 2120 810 820 830 840 850 860 mKIAA0 KLFKDMGRFTVNKVALSTKDVLILLHKWSLIERDTKLQGELKAVIEQHQAKDLMKMLKDK . :.::.:::::...:::::::.::::::::::: ::: .:.:.::. ::..:::::::: gi|114 QAFRDMNRFTVNETVLSTKDVLVLLHKWSLIERDLKLQEDLRAAIEKAQARELMKMLKDK 2130 2140 2150 2160 2170 2180 870 880 890 900 910 920 mKIAA0 SRPVVAAQARGPRGRKRRHGGLEETAEPQLEASCLEKCKDLLRATLTHWGPGDPLPGPTQ ..::. :.:.:::::::: : :: :. .: :: :: :: :::. ::.::: : : ::: gi|114 NKPVMPARAKGPRGRKRRPGEAEEMADAELMASTLETCKGLLRSILTYWGPVIPGPDPTQ 2190 2200 2210 2220 2230 2240 930 940 950 960 970 980 mKIAA0 GSVGQTIPKSKTLSSAHAAVSLVASWVLRSLAERPVSRAEVTRLLDWLKSHILPQPMVVA : .. :.: . . ..::.::..::.:::.::.:.::::.. :. ::::::::.:.::: gi|114 EPVDSASPESDAPGPVYAAASLAVSWMLRSVAEHPLSRAEAAGLIGWLKSHILPHPVVVA 2250 2260 2270 2280 2290 2300 990 1000 1010 1020 1030 1040 mKIAA0 DLLGDSAVKTGIFKLYNHHCSAQGLVGPAQDVACKFSTVMLQLLVAQGRKESPFHSVAEA ::: :.::...:::::.. :.:.::.::::.::: :.::::::..:::: :::: . :: gi|114 DLLKDGAVRSSIFKLYSRLCGAEGLAGPAQEVACLFNTVMLQLVAAQGRAGSPFHPAMEA 2310 2320 2330 2340 2350 2360 1050 1060 1070 1080 1090 1100 mKIAA0 LCLDSLNEKEEAKRAPAAFLVSLYVKDMWLGAQQPDTFLAHIRMVCEAAKDVPLDEPEAI : :.::.::.:: :: ::::::::.::.:::::.:::.:.:.::::::: :.: .: ::: gi|114 LSLSSLSEKDEATRASAAFLVSLYIKDIWLGAQRPDTLLTHVRMVCEAADDAPSSEEEAI 2370 2380 2390 2400 2410 2420 1110 1120 mKIAA0 VVLCRNVDSSAQCLTRSR ::::... :.: gi|114 VVLCKDTASAASDA 2430 >>gi|119630281|gb|EAX09876.1| hCG401196, isoform CRA_a [ (2271 aa) initn: 4658 init1: 3092 opt: 5336 Z-score: 6269.5 bits: 1172.9 E(): 0 Smith-Waterman score: 5336; 72.257% identity (89.117% similar) in 1121 aa overlap (1-1120:1150-2268) 10 20 30 mKIAA0 LSSLGKTLVQLLASSHQDQLQSSELLWCAE :..:::::::::. : ::::::.:::: .: gi|119 LREVTLALLSLPETHLVTQQPTKSPGKERHLNALGKTLVQLLTCSPQDQLQSGELLWSSE 1120 1130 1140 1150 1160 1170 40 50 60 70 80 90 mKIAA0 YVRGLGALLPTLAEHELDTVFLQTLQKDPVLAPVVPEGVLEYCLARRTQTALGIASLLLQ ::::::::::::: :::::.:.:::.::::::.: .:.::::::::.::.::.:::: gi|119 YVRGLGALLPTLAVDELDTVLLHTLQRDPVLAPAVGADLLDYCLARRTQAALSIAALLLQ 1180 1190 1200 1210 1220 1230 100 110 120 130 140 mKIAA0 YSGTHLVKFELWCGQPGVGPTLQEHLDDFFPLIHVYLQHRAQGSFMRPTGVSSAVTPVL- : :::. :: :: : : : :: ::::.:::::::: :... : ::.:::::: ::: gi|119 ESCTHLLWFEQWCLQAGPGLGLQGDLDDFLPLIHVYLQCRTRSHFTRPAGVSSAVIPVLR 1240 1250 1260 1270 1280 1290 150 160 170 180 190 200 mKIAA0 KALWRQVRDRFFHITGPSKDALHLEALAQLIPFARTKDLHVLMDHLPNTLRTLSNHKSWT :.::::...:.. .: ..:. : ::::.::::.::: ::::.::. :.: :.:: : gi|119 KTLWRQLQSRLLSTDSPPASGLYQEILAQLVPFARAKDLSVLMDRLPSLLHTPSSHKRWI 1300 1310 1320 1330 1340 1350 210 220 230 240 250 260 mKIAA0 LADSVSAALAESAEELGSWRKTLLRSCIQWLAVSFSGREPEDENTQEHEKAMLVRLSELL .:::.:::: ::::: .::.:::.::..:: ::::: . .:.:::..:: ::.::. :: gi|119 VADSISAALEGSAEELCAWRRTLLESCVKWLIVSFSGGQQDDDNTQNQEKEMLLRLNALL 1360 1370 1380 1390 1400 1410 270 280 290 300 310 320 mKIAA0 HAVKEVDPGDWQQFVKTGLKFRYHDLTFLKTLLSATKLLYGPESSGRTKLVQLSVVHMML ::..::::::::.::: ::::::.: :::: ::.:..:::.:::: ::::.:: ::..:: gi|119 HALNEVDPGDWQKFVKKGLKFRYQDHTFLKMLLTAVQLLYSPESSVRTKLIQLPVVYVML 1420 1430 1440 1450 1460 1470 330 340 350 360 370 380 mKIAA0 TQHSLFLPTMLSSEEEETPDSGVKETLLDLMSTVVRLCPSVCQSSHFAVLLGTYSATLSV ::::::::.:.:. ::.::: :::.:.::: :::..:::::.:::::::::.:.::::: gi|119 MQHSLFLPTLLTSDGEESPDSQVKEALVDLMLTVVEMCPSVCESSHFAVLLGAYGATLSV 1480 1490 1500 1510 1520 1530 390 400 410 420 430 440 mKIAA0 LDQKILLLLRAYEQNNLSLISFRVLLWGPAAVEHHKTCRSLGKSLWQQPSVGDILRLLDP :::::::::::::::.::::.:::::::::::::::::::::.:::::::::::::::: gi|119 LDQKILLLLRAYEQNKLSLINFRVLLWGPAAVEHHKTCRSLGRSLWQQPSVGDILRLLDR 1540 1550 1560 1570 1580 1590 450 460 470 480 490 500 mKIAA0 DRMMQTILHFPQYRKLLPTEDTGEPLVFKDKTARVDLDSLYDPCFLLHLFGELTRPEFVV :::::::::::: :.::: ::: : :.::::. :::::.::::::::.::.::::::::: gi|119 DRMMQTILHFPQNRRLLPPEDTQE-LIFKDKS-RVDLDGLYDPCFLLQLFSELTRPEFVV 1600 1610 1620 1630 1640 1650 510 520 530 540 550 560 mKIAA0 DCRKFLDSNALGLTVAALSSYDPQMRAAAYYVLAAYYSHLEGARFREQSQVLYLLDVVRN :::::::::::::::.::::::::::: ::.::::::::::::::.::::.::::::::: gi|119 DCRKFLDSNALGLTVTALSSYDPQMRAIAYHVLAAYYSHLEGARFQEQSQLLYLLDVVRN 1660 1670 1680 1690 1700 1710 570 580 590 600 610 620 mKIAA0 GIRTPNLRLPFTVALFIAKAAVQILKPEEHMYWKISKFLLSHENLNMDKLPGFYQFFYSS :::: ..:: ::.::::::::.:::::::::: :.:.:::::: :::::.:::::::::: gi|119 GIRTQDMRLTFTLALFIAKAALQILKPEEHMYLKVSNFLLSHEYLNMDKVPGFYQFFYSS 1720 1730 1740 1750 1760 1770 630 640 650 660 670 680 mKIAA0 DFQQKTEQEWVLEILRQGIRDKHCYELCSRRGVFHIILSFFNSPLCDEVAQNWILEILQN ::.:::::.::. .::::::::.:::::.:::.::::::::.::::::.::::::::::: gi|119 DFEQKTEQKWVFGVLRQGIRDKQCYELCARRGIFHIILSFFHSPLCDEAAQNWILEILQN 1780 1790 1800 1810 1820 1830 690 700 710 720 730 740 mKIAA0 VAHITRSAYEVIRDYSLLTWVLHILESRFVETQLLSNVISLLHTLWVTNLGNKAPEERSQ .:...:::::.:::::::::.::::::.:.:: ::::::::::::::::::.:: : .:: gi|119 AAQVARSAYEIIRDYSLLTWILHILESKFLETPLLSNVISLLHTLWVTNLGDKAVEWESQ 1840 1850 1860 1870 1880 1890 750 760 770 780 790 800 mKIAA0 PPGQVGSQESEKMLALHMVSEFLYVLIALTKHLRPTLASAQLMNFFWTLESVLSYRATII : .::: : ::::.:.:::::::.: :::::::: .:: ::: ::.::: ::::.: gi|119 RLCQPSSQEPAKRLALHLVNEFLYVLIVLMKHLRPTLAPVQLTNFFGTLDSVLRYRATVI 1900 1910 1920 1930 1940 1950 810 820 830 840 850 860 mKIAA0 KLFKDMGRFTVNKVALSTKDVLILLHKWSLIERDTKLQGELKAVIEQHQAKDLMKMLKDK . :.::.:::::...:::::::.::::::::::: ::: .:.:.::. ::..:::::::: gi|119 QAFRDMNRFTVNETVLSTKDVLVLLHKWSLIERDLKLQEDLRAAIEKAQARELMKMLKDK 1960 1970 1980 1990 2000 2010 870 880 890 900 910 920 mKIAA0 SRPVVAAQARGPRGRKRRHGGLEETAEPQLEASCLEKCKDLLRATLTHWGPGDPLPGPTQ ..::. :.:.:::::::: : :: :.:.: :: :: :: :::. ::.: : : : ::: gi|119 NKPVMPARAKGPRGRKRRPGEAEEMADPELMASTLETCKGLLRSILTYWRPVIPGPDPTQ 2020 2030 2040 2050 2060 2070 930 940 950 960 970 980 mKIAA0 GSVGQTIPKSKTLSSAHAAVSLVASWVLRSLAERPVSRAEVTRLLDWLKSHILPQPMVVA : .. :.: . . ..::.::..::::::.::.:.::::.. :. ::::::::.:.::: gi|119 EPVDSASPESDAPGPVYAAASLAVSWVLRSVAEHPLSRAEAAGLIGWLKSHILPHPVVVA 2080 2090 2100 2110 2120 2130 990 1000 1010 1020 1030 1040 mKIAA0 DLLGDSAVKTGIFKLYNHHCSAQGLVGPAQDVACKFSTVMLQLLVAQGRKESPFHSVAEA ::: ::::...::.::.. :.:.::.::.:.::: :.::::::..:::: :::: . :: gi|119 DLLKDSAVRSSIFRLYSRLCGAEGLAGPVQEVACLFNTVMLQLVAAQGRAGSPFHPAMEA 2140 2150 2160 2170 2180 2190 1050 1060 1070 1080 1090 1100 mKIAA0 LCLDSLNEKEEAKRAPAAFLVSLYVKDMWLGAQQPDTFLAHIRMVCEAAKDVPLDEPEAI : :.::.::.:: .: ::::::::.::.:::::.:::.:.:.::::::: :.: .: ::: gi|119 LSLSSLSEKDEATQASAAFLVSLYIKDIWLGAQRPDTLLTHVRMVCEAADDAPSSEEEAI 2200 2210 2220 2230 2240 2250 1110 1120 mKIAA0 VVLCRNVDSSAQCLTRSR ::::... :.: gi|119 VVLCKDAASAASDA 2260 2270 >>gi|8118221|gb|AAF72943.1| C21orf108 [Homo sapiens] (2248 aa) initn: 4656 init1: 3090 opt: 5334 Z-score: 6267.2 bits: 1172.5 E(): 0 Smith-Waterman score: 5334; 72.257% identity (89.117% similar) in 1121 aa overlap (1-1120:1127-2245) 10 20 30 mKIAA0 LSSLGKTLVQLLASSHQDQLQSSELLWCAE :..:::::::::. : ::::::.:::: .: gi|811 LREVTLALLSLPETHLVTQQPTKSPGKERHLNALGKTLVQLLTCSPQDQLQSGELLWSSE 1100 1110 1120 1130 1140 1150 40 50 60 70 80 90 mKIAA0 YVRGLGALLPTLAEHELDTVFLQTLQKDPVLAPVVPEGVLEYCLARRTQTALGIASLLLQ ::::::::::::: :::::.:.:::.::::::.: .:.::::::::.::.::.:::: gi|811 YVRGLGALLPTLAVDELDTVLLHTLQRDPVLAPAVGADLLDYCLARRTQAALSIAALLLQ 1160 1170 1180 1190 1200 1210 100 110 120 130 140 mKIAA0 YSGTHLVKFELWCGQPGVGPTLQEHLDDFFPLIHVYLQHRAQGSFMRPTGVSSAVTPVL- : :::. :: :: : : : :: ::::.:::::::: :... : ::.:::::: ::: gi|811 ESCTHLLWFEQWCLQAGPGLGLQGDLDDFLPLIHVYLQCRTRSHFTRPAGVSSAVIPVLR 1220 1230 1240 1250 1260 1270 150 160 170 180 190 200 mKIAA0 KALWRQVRDRFFHITGPSKDALHLEALAQLIPFARTKDLHVLMDHLPNTLRTLSNHKSWT :.::::...:.. .: ..:. : ::::.::::.::: ::::.::. :.: :.:: : gi|811 KTLWRQLQSRLLSTDSPPASGLYQEILAQLVPFARAKDLSVLMDRLPSLLHTPSSHKRWI 1280 1290 1300 1310 1320 1330 210 220 230 240 250 260 mKIAA0 LADSVSAALAESAEELGSWRKTLLRSCIQWLAVSFSGREPEDENTQEHEKAMLVRLSELL .:::.:::: ::::: .::.:::.::..:: ::::: . .:.:::..:: ::.::. :: gi|811 VADSISAALEGSAEELCAWRRTLLESCVKWLIVSFSGGQQDDDNTQNQEKEMLLRLNALL 1340 1350 1360 1370 1380 1390 270 280 290 300 310 320 mKIAA0 HAVKEVDPGDWQQFVKTGLKFRYHDLTFLKTLLSATKLLYGPESSGRTKLVQLSVVHMML ::..::::::::.::: ::::::.: :::: ::.:..:::.:::: ::::.:: ::..:: gi|811 HALNEVDPGDWQKFVKKGLKFRYQDHTFLKMLLTAVQLLYSPESSVRTKLIQLPVVYVML 1400 1410 1420 1430 1440 1450 330 340 350 360 370 380 mKIAA0 TQHSLFLPTMLSSEEEETPDSGVKETLLDLMSTVVRLCPSVCQSSHFAVLLGTYSATLSV ::::::::.:.:. ::.::: :::.:.::: :::..:::::.:::::::::.:.::::: gi|811 MQHSLFLPTLLTSDGEESPDSQVKEALVDLMLTVVEMCPSVCESSHFAVLLGAYGATLSV 1460 1470 1480 1490 1500 1510 390 400 410 420 430 440 mKIAA0 LDQKILLLLRAYEQNNLSLISFRVLLWGPAAVEHHKTCRSLGKSLWQQPSVGDILRLLDP :::::::::::::::.::::.:::::::::::::::::::::.:::::::::::::::: gi|811 LDQKILLLLRAYEQNKLSLINFRVLLWGPAAVEHHKTCRSLGRSLWQQPSVGDILRLLDR 1520 1530 1540 1550 1560 1570 450 460 470 480 490 500 mKIAA0 DRMMQTILHFPQYRKLLPTEDTGEPLVFKDKTARVDLDSLYDPCFLLHLFGELTRPEFVV :::::::::::: :.::: ::: : :.::::. :::::.::::::::.::.::::::::: gi|811 DRMMQTILHFPQNRRLLPPEDTQE-LIFKDKS-RVDLDGLYDPCFLLQLFSELTRPEFVV 1580 1590 1600 1610 1620 1630 510 520 530 540 550 560 mKIAA0 DCRKFLDSNALGLTVAALSSYDPQMRAAAYYVLAAYYSHLEGARFREQSQVLYLLDVVRN :::::::::::::::.::::::::::: ::.::::::::::::::.::::.::::::::: gi|811 DCRKFLDSNALGLTVTALSSYDPQMRAIAYHVLAAYYSHLEGARFQEQSQLLYLLDVVRN 1640 1650 1660 1670 1680 1690 570 580 590 600 610 620 mKIAA0 GIRTPNLRLPFTVALFIAKAAVQILKPEEHMYWKISKFLLSHENLNMDKLPGFYQFFYSS :::: ..:: ::.::::::::.:::::::::: :.:.:::::: :::::.:::::::::: gi|811 GIRTQDMRLTFTLALFIAKAALQILKPEEHMYLKVSNFLLSHEYLNMDKVPGFYQFFYSS 1700 1710 1720 1730 1740 1750 630 640 650 660 670 680 mKIAA0 DFQQKTEQEWVLEILRQGIRDKHCYELCSRRGVFHIILSFFNSPLCDEVAQNWILEILQN ::.:::::.::. .::::::::.:::::.:::.::::::::.::::::.::::::::::: gi|811 DFEQKTEQKWVFGLLRQGIRDKQCYELCARRGIFHIILSFFHSPLCDEAAQNWILEILQN 1760 1770 1780 1790 1800 1810 690 700 710 720 730 740 mKIAA0 VAHITRSAYEVIRDYSLLTWVLHILESRFVETQLLSNVISLLHTLWVTNLGNKAPEERSQ .:...:::::.:::::::::.::::::.:.:: ::::::::::::::::::.:: : .:: gi|811 AAQVARSAYEIIRDYSLLTWILHILESKFLETPLLSNVISLLHTLWVTNLGDKAVEWESQ 1820 1830 1840 1850 1860 1870 750 760 770 780 790 800 mKIAA0 PPGQVGSQESEKMLALHMVSEFLYVLIALTKHLRPTLASAQLMNFFWTLESVLSYRATII : .::: : ::::.:.:::::::.: :::::::: .:: ::: ::.::: ::::.: gi|811 RLCQPSSQEPAKRLALHLVNEFLYVLIVLMKHLRPTLAPVQLTNFFGTLDSVLRYRATVI 1880 1890 1900 1910 1920 1930 810 820 830 840 850 860 mKIAA0 KLFKDMGRFTVNKVALSTKDVLILLHKWSLIERDTKLQGELKAVIEQHQAKDLMKMLKDK . :.::.:::::...:::::::.::::::::::: ::: .:.:.::. ::..:::::::: gi|811 QAFRDMNRFTVNETVLSTKDVLVLLHKWSLIERDLKLQEDLRAAIEKAQARELMKMLKDK 1940 1950 1960 1970 1980 1990 870 880 890 900 910 920 mKIAA0 SRPVVAAQARGPRGRKRRHGGLEETAEPQLEASCLEKCKDLLRATLTHWGPGDPLPGPTQ ..::. :.:.:::::::: : :: :.:.: :: :: :: :::. ::.: : : : ::: gi|811 NKPVMPARAKGPRGRKRRPGEAEEMADPELMASTLETCKGLLRSILTYWRPVIPGPDPTQ 2000 2010 2020 2030 2040 2050 930 940 950 960 970 980 mKIAA0 GSVGQTIPKSKTLSSAHAAVSLVASWVLRSLAERPVSRAEVTRLLDWLKSHILPQPMVVA : .. :.: . . ..::.::..::::::.::.:.::::.. :. ::::::::.:.::: gi|811 EPVDSASPESDAPGPVYAAASLAVSWVLRSVAEHPLSRAEAAGLIGWLKSHILPHPVVVA 2060 2070 2080 2090 2100 2110 990 1000 1010 1020 1030 1040 mKIAA0 DLLGDSAVKTGIFKLYNHHCSAQGLVGPAQDVACKFSTVMLQLLVAQGRKESPFHSVAEA ::: ::::...::.::.. :.:.::.::.:.::: :.::::::..:::: :::: . :: gi|811 DLLKDSAVRSSIFRLYSRLCGAEGLAGPVQEVACLFNTVMLQLVAAQGRAGSPFHPAMEA 2120 2130 2140 2150 2160 2170 1050 1060 1070 1080 1090 1100 mKIAA0 LCLDSLNEKEEAKRAPAAFLVSLYVKDMWLGAQQPDTFLAHIRMVCEAAKDVPLDEPEAI : :.::.::.:: .: ::::::::.::.:::::.:::.:.:.::::::: :.: .: ::: gi|811 LSLSSLSEKDEATQASAAFLVSLYIKDIWLGAQRPDTLLTHVRMVCEAADDAPSSEEEAI 2180 2190 2200 2210 2220 2230 1110 1120 mKIAA0 VVLCRNVDSSAQCLTRSR ::::... :.: gi|811 VVLCKDAASAASDA 2240 >>gi|160419249|sp|O60287.3|NPA1P_HUMAN RecName: Full=Nuc (2271 aa) initn: 4656 init1: 3090 opt: 5334 Z-score: 6267.2 bits: 1172.5 E(): 0 Smith-Waterman score: 5334; 72.257% identity (89.117% similar) in 1121 aa overlap (1-1120:1150-2268) 10 20 30 mKIAA0 LSSLGKTLVQLLASSHQDQLQSSELLWCAE :..:::::::::. : ::::::.:::: .: gi|160 LREVTLALLSLPETHLVTQQPTKSPGKERHLNALGKTLVQLLTCSPQDQLQSGELLWSSE 1120 1130 1140 1150 1160 1170 40 50 60 70 80 90 mKIAA0 YVRGLGALLPTLAEHELDTVFLQTLQKDPVLAPVVPEGVLEYCLARRTQTALGIASLLLQ ::::::::::::: :::::.:.:::.::::::.: .:.::::::::.::.::.:::: gi|160 YVRGLGALLPTLAVDELDTVLLHTLQRDPVLAPAVGADLLDYCLARRTQAALSIAALLLQ 1180 1190 1200 1210 1220 1230 100 110 120 130 140 mKIAA0 YSGTHLVKFELWCGQPGVGPTLQEHLDDFFPLIHVYLQHRAQGSFMRPTGVSSAVTPVL- : :::. :: :: : : : :: ::::.:::::::: :... : ::.:::::: ::: gi|160 ESCTHLLWFEQWCLQAGPGLGLQGDLDDFLPLIHVYLQCRTRSHFTRPAGVSSAVIPVLR 1240 1250 1260 1270 1280 1290 150 160 170 180 190 200 mKIAA0 KALWRQVRDRFFHITGPSKDALHLEALAQLIPFARTKDLHVLMDHLPNTLRTLSNHKSWT :.::::...:.. .: ..:. : ::::.::::.::: ::::.::. :.: :.:: : gi|160 KTLWRQLQSRLLSTDSPPASGLYQEILAQLVPFARAKDLSVLMDRLPSLLHTPSSHKRWI 1300 1310 1320 1330 1340 1350 210 220 230 240 250 260 mKIAA0 LADSVSAALAESAEELGSWRKTLLRSCIQWLAVSFSGREPEDENTQEHEKAMLVRLSELL .:::.:::: ::::: .::.:::.::..:: ::::: . .:.:::..:: ::.::. :: gi|160 VADSISAALEGSAEELCAWRRTLLESCVKWLIVSFSGGQQDDDNTQNQEKEMLLRLNALL 1360 1370 1380 1390 1400 1410 270 280 290 300 310 320 mKIAA0 HAVKEVDPGDWQQFVKTGLKFRYHDLTFLKTLLSATKLLYGPESSGRTKLVQLSVVHMML ::..::::::::.::: ::::::.: :::: ::.:..:::.:::: ::::.:: ::..:: gi|160 HALNEVDPGDWQKFVKKGLKFRYQDHTFLKMLLTAVQLLYSPESSVRTKLIQLPVVYVML 1420 1430 1440 1450 1460 1470 330 340 350 360 370 380 mKIAA0 TQHSLFLPTMLSSEEEETPDSGVKETLLDLMSTVVRLCPSVCQSSHFAVLLGTYSATLSV ::::::::.:.:. ::.::: :::.:.::: :::..:::::.:::::::::.:.::::: gi|160 MQHSLFLPTLLTSDGEESPDSQVKEALVDLMLTVVEMCPSVCESSHFAVLLGAYGATLSV 1480 1490 1500 1510 1520 1530 390 400 410 420 430 440 mKIAA0 LDQKILLLLRAYEQNNLSLISFRVLLWGPAAVEHHKTCRSLGKSLWQQPSVGDILRLLDP :::::::::::::::.::::.:::::::::::::::::::::.:::::::::::::::: gi|160 LDQKILLLLRAYEQNKLSLINFRVLLWGPAAVEHHKTCRSLGRSLWQQPSVGDILRLLDR 1540 1550 1560 1570 1580 1590 450 460 470 480 490 500 mKIAA0 DRMMQTILHFPQYRKLLPTEDTGEPLVFKDKTARVDLDSLYDPCFLLHLFGELTRPEFVV :::::::::::: :.::: ::: : :.::::. :::::.::::::::.::.::::::::: gi|160 DRMMQTILHFPQNRRLLPPEDTQE-LIFKDKS-RVDLDGLYDPCFLLQLFSELTRPEFVV 1600 1610 1620 1630 1640 1650 510 520 530 540 550 560 mKIAA0 DCRKFLDSNALGLTVAALSSYDPQMRAAAYYVLAAYYSHLEGARFREQSQVLYLLDVVRN :::::::::::::::.::::::::::: ::.::::::::::::::.::::.::::::::: gi|160 DCRKFLDSNALGLTVTALSSYDPQMRAIAYHVLAAYYSHLEGARFQEQSQLLYLLDVVRN 1660 1670 1680 1690 1700 1710 570 580 590 600 610 620 mKIAA0 GIRTPNLRLPFTVALFIAKAAVQILKPEEHMYWKISKFLLSHENLNMDKLPGFYQFFYSS :::: ..:: ::.::::::::.:::::::::: :.:.:::::: :::::.:::::::::: gi|160 GIRTQDMRLTFTLALFIAKAALQILKPEEHMYLKVSNFLLSHEYLNMDKVPGFYQFFYSS 1720 1730 1740 1750 1760 1770 630 640 650 660 670 680 mKIAA0 DFQQKTEQEWVLEILRQGIRDKHCYELCSRRGVFHIILSFFNSPLCDEVAQNWILEILQN ::.:::::.::. .::::::::.:::::.:::.::::::::.::::::.::::::::::: gi|160 DFEQKTEQKWVFGLLRQGIRDKQCYELCARRGIFHIILSFFHSPLCDEAAQNWILEILQN 1780 1790 1800 1810 1820 1830 690 700 710 720 730 740 mKIAA0 VAHITRSAYEVIRDYSLLTWVLHILESRFVETQLLSNVISLLHTLWVTNLGNKAPEERSQ .:...:::::.:::::::::.::::::.:.:: ::::::::::::::::::.:: : .:: gi|160 AAQVARSAYEIIRDYSLLTWILHILESKFLETPLLSNVISLLHTLWVTNLGDKAVEWESQ 1840 1850 1860 1870 1880 1890 750 760 770 780 790 800 mKIAA0 PPGQVGSQESEKMLALHMVSEFLYVLIALTKHLRPTLASAQLMNFFWTLESVLSYRATII : .::: : ::::.:.:::::::.: :::::::: .:: ::: ::.::: ::::.: gi|160 RLCQPSSQEPAKRLALHLVNEFLYVLIVLMKHLRPTLAPVQLTNFFGTLDSVLRYRATVI 1900 1910 1920 1930 1940 1950 810 820 830 840 850 860 mKIAA0 KLFKDMGRFTVNKVALSTKDVLILLHKWSLIERDTKLQGELKAVIEQHQAKDLMKMLKDK . :.::.:::::...:::::::.::::::::::: ::: .:.:.::. ::..:::::::: gi|160 QAFRDMNRFTVNETVLSTKDVLVLLHKWSLIERDLKLQEDLRAAIEKAQARELMKMLKDK 1960 1970 1980 1990 2000 2010 870 880 890 900 910 920 mKIAA0 SRPVVAAQARGPRGRKRRHGGLEETAEPQLEASCLEKCKDLLRATLTHWGPGDPLPGPTQ ..::. :.:.:::::::: : :: :.:.: :: :: :: :::. ::.: : : : ::: gi|160 NKPVMPARAKGPRGRKRRPGEAEEMADPELMASTLETCKGLLRSILTYWRPVIPGPDPTQ 2020 2030 2040 2050 2060 2070 930 940 950 960 970 980 mKIAA0 GSVGQTIPKSKTLSSAHAAVSLVASWVLRSLAERPVSRAEVTRLLDWLKSHILPQPMVVA : .. :.: . . ..::.::..::::::.::.:.::::.. :. ::::::::.:.::: gi|160 EPVDSASPESDAPGPVYAAASLAVSWVLRSVAEHPLSRAEAAGLIGWLKSHILPHPVVVA 2080 2090 2100 2110 2120 2130 990 1000 1010 1020 1030 1040 mKIAA0 DLLGDSAVKTGIFKLYNHHCSAQGLVGPAQDVACKFSTVMLQLLVAQGRKESPFHSVAEA ::: ::::...::.::.. :.:.::.::.:.::: :.::::::..:::: :::: . :: gi|160 DLLKDSAVRSSIFRLYSRLCGAEGLAGPVQEVACLFNTVMLQLVAAQGRAGSPFHPAMEA 2140 2150 2160 2170 2180 2190 1050 1060 1070 1080 1090 1100 mKIAA0 LCLDSLNEKEEAKRAPAAFLVSLYVKDMWLGAQQPDTFLAHIRMVCEAAKDVPLDEPEAI : :.::.::.:: .: ::::::::.::.:::::.:::.:.:.::::::: :.: .: ::: gi|160 LSLSSLSEKDEATQASAAFLVSLYIKDIWLGAQRPDTLLTHVRMVCEAADDAPSSEEEAI 2200 2210 2220 2230 2240 2250 1110 1120 mKIAA0 VVLCRNVDSSAQCLTRSR ::::... :.: gi|160 VVLCKDAASAASDA 2260 2270 1127 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Sun Mar 15 02:46:54 2009 done: Sun Mar 15 02:56:31 2009 Total Scan time: 1247.430 Total Display time: 0.970 Function used was FASTA [version 34.26.5 April 26, 2007]