Comparison of KIAA cDNA sequences between mouse and human (KIAA0539)

<< Original sequence data >>

mouse  mKIAA0539 (msh24271)     length:   3842 bp
human   KIAA0539  (pf00803)     length:   7594 bp


<< Aligned sequence information (excl. stop, if exists.) >>

----------------------------------------------------------
            length    #match  #mismatch   %diff
----------------------------------------------------------
DNA

  CDS1 :     3357      2602      755      22.49
  Total:     3357      2602      755      22.49

amino acid

  CDS1 :     1121       810      311      27.74
  Total:     1121       810      311      27.74
----------------------------------------------------------


<< Alignment region (incl. stop, if exists.) >>

----------------------------------------------------------
                    cDNA      cDNA original    amino acid
----------------------------------------------------------
  CDS1 : mouse     2 -  3361      2 -  3385      1 -  1120
         human  2775 -  6131      3 -  6143    925 -  2043
----------------------------------------------------------


<< Alignment >>

*--[ CDS1 ]--*
             1 ----+----*----+----*----+----*----+----*----+----* 50
             1 L  S  S  L  G  K  T  L  V  Q  L  L  A  S  S  H  Q  17
msh24271     2 TTAAGCAGTCTTGGAAAGACCCTGGTACAACTGCTGGCAAGCAGCCACCA 51
                | |    |||||||||||||||||| || |||||| |  |||||| |||
pf00803   2775 CTGAATGCTCTTGGAAAGACCCTGGTGCAGCTGCTGACCTGCAGCCCCCA 2824
           925 L  N  A  L  G  K  T  L  V  Q  L  L  T  C  S  P  Q  941

            51 ----+----*----+----*----+----*----+----*----+----* 100
            18  D  Q  L  Q  S  S  E  L  L  W  C  A  E  Y  V  R  G 34
msh24271    52 GGATCAGCTGCAGAGCAGTGAGCTACTCTGGTGCGCCGAGTATGTGCGAG 101
               |||||||||||||||  ||||||| || |||| | ||||||||||| |||
pf00803   2825 GGATCAGCTGCAGAGTGGTGAGCTCCTGTGGTCCTCCGAGTATGTGAGAG 2874
           942  D  Q  L  Q  S  G  E  L  L  W  S  S  E  Y  V  R  G 958

           101 ----+----*----+----*----+----*----+----*----+----* 150
            35   L  G  A  L  L  P  T  L  A  E  H  E  L  D  T  V   50
msh24271   102 GCCTGGGGGCTCTGCTCCCCACTCTGGCTGAGCATGAGCTGGACACGGTA 151
               |||||||||||||||| ||||| || || | | | ||||||||||| || 
pf00803   2875 GCCTGGGGGCTCTGCTGCCCACGCTAGCAGTGGACGAGCTGGACACAGTG 2924
           959   L  G  A  L  L  P  T  L  A  V  D  E  L  D  T  V   974

           151 ----+----*----+----*----+----*----+----*----+----* 200
            51 F  L  Q  T  L  Q  K  D  P  V  L  A  P  V  V  P  E  67
msh24271   152 TTCCTTCAGACTCTTCAGAAAGACCCCGTGCTGGCCCCTGTGGTCCCCGA 201
                |||| || ||||| |||| |||||| ||||||||||| |  |||   | 
pf00803   2925 CTCCTCCACACTCTGCAGAGAGACCCTGTGCTGGCCCCCGCAGTCGGGGC 2974
           975 L  L  H  T  L  Q  R  D  P  V  L  A  P  A  V  G  A  991

           201 ----+----*----+----*----+----*----+----*----+----* 250
            68  G  V  L  E  Y  C  L  A  R  R  T  Q  T  A  L  G  I 84
msh24271   202 GGGCGTGCTTGAGTACTGCCTGGCCCGACGGACACAGACAGCCCTGGGCA 251
                |   ||||||| |||||||||||||| || |||||| | |||||  |||
pf00803   2975 TGATCTGCTTGACTACTGCCTGGCCCGGCGCACACAGGCGGCCCTCAGCA 3024
           992  D  L  L  D  Y  C  L  A  R  R  T  Q  A  A  L  S  I 1008

           251 ----+----*----+----*----+----*----+----*----+----* 300
            85   A  S  L  L  L  Q  Y  S  G  T  H  L  V  K  F  E   100
msh24271   252 TTGCCAGCCTCCTGCTTCAGTACAGCGGCACCCACCTTGTGAAGTTTGAG 301
               | ||   ||| || || ||| | ||| |||||||| |  ||  ||| |||
pf00803   3025 TCGCTGCCCTGCTCCTCCAGGAGAGCTGCACCCACTTGCTGTGGTTCGAG 3074
          1009   A  A  L  L  L  Q  E  S  C  T  H  L  L  W  F  E   1024

           301 ----+----*----+----*----+----*----+----*----+----* 350
           101 L  W  C  G  Q  P  G  V  G  P  T  L  Q  E  H  L  D  117
msh24271   302 CTGTGGTGTGGGCAGCCTGGTGTGGGGCCCACCTTGCAGGAGCACCTAGA 351
               | ||||||   |||| ||||    |||| |  | | |||| | |||| ||
pf00803   3075 CAGTGGTGCCTGCAGGCTGGCCCAGGGCTCGGCCTCCAGGGGGACCTGGA 3124
          1025 Q  W  C  L  Q  A  G  P  G  L  G  L  Q  G  D  L  D  1041

           351 ----+----*----+----*----+----*----+----*----+----* 400
           118  D  F  F  P  L  I  H  V  Y  L  Q  H  R  A  Q  G  S 134
msh24271   352 TGACTTCTTCCCCCTTATCCATGTGTACCTCCAGCACAGGGCGCAAGGAA 401
                |||||| | ||||| ||||||||||||||||||  |||| | |   |  
pf00803   3125 CGACTTCCTTCCCCTCATCCATGTGTACCTCCAGTGCAGGACACGGAGCC 3174
          1042  D  F  L  P  L  I  H  V  Y  L  Q  C  R  T  R  S  H 1058

           401 ----+----*----+----*----+----*----+----*----+----* 450
           135   F  M  R  P  T  G  V  S  S  A  V  T  P  V  L  .   149
msh24271   402 GCTTCATGCGGCCAACAGGAGTATCCTCTGCTGTCACTCCTGTCTTG... 448
                |||||  || ||| ||||||| || || ||||||| ||||||||||   
pf00803   3175 ACTTCACACGCCCAGCAGGAGTGTCTTCCGCTGTCATTCCTGTCTTGAGG 3224
          1059   F  T  R  P  A  G  V  S  S  A  V  I  P  V  L  R   1074

           451 ----+----*----+----*----+----*----+----*----+----* 500
           150 K  A  L  W  R  Q  V  R  D  R  F  F  H  I  T  G  P  166
msh24271   449 AAGGCCCTGTGGAGACAAGTGCGAGACAGGTTCTTTCATATCACTGGGCC 498
               ||| |||||||||| ||  | |    |||| |  ||   |      | ||
pf00803   3225 AAGACCCTGTGGAGGCAGCTACAGAGCAGGCTTCTTAGCACTGACAGTCC 3274
          1075 K  T  L  W  R  Q  L  Q  S  R  L  L  S  T  D  S  P  1091

           501 ----+----*----+----*----+----*----+----*----+----* 550
           167  S  K  D  A  L  H  L  E  A  L  A  Q  L  I  P  F  A 183
msh24271   499 TTCCAAAGATGCGCTGCATCTGGAGGCCCTGGCCCAGCTCATTCCATTTG 548
                 |   |  || |||| | | ||||  |||||| |||||  | || ||||
pf00803   3275 CCCAGCATCTGGGCTGTACCAGGAGATCCTGGCACAGCTGGTCCCGTTTG 3324
          1092  P  A  S  G  L  Y  Q  E  I  L  A  Q  L  V  P  F  A 1108

           551 ----+----*----+----*----+----*----+----*----+----* 600
           184   R  T  K  D  L  H  V  L  M  D  H  L  P  N  T  L   199
msh24271   549 CAAGAACCAAGGATCTGCATGTCCTCATGGACCATTTACCCAACACGCTT 598
               || || ||||||||||   ||| ||||||||||   | |||| |  ||||
pf00803   3325 CACGAGCCAAGGATCTCAGTGTACTCATGGACCGCCTGCCCAGCTTGCTT 3374
          1109   R  A  K  D  L  S  V  L  M  D  R  L  P  S  L  L   1124

           601 ----+----*----+----*----+----*----+----*----+----* 650
           200 R  T  L  S  N  H  K  S  W  T  L  A  D  S  V  S  A  216
msh24271   599 CGGACTCTGAGTAATCACAAGAGTTGGACCCTGGCTGACTCTGTCTCAGC 648
               |  || |  || | ||||||||| |||| | |||| |||||  | |||||
pf00803   3375 CACACCCCAAGCAGTCACAAGAGGTGGATCGTGGCCGACTCCATTTCAGC 3424
          1125 H  T  P  S  S  H  K  R  W  I  V  A  D  S  I  S  A  1141

           651 ----+----*----+----*----+----*----+----*----+----* 700
           217  A  L  A  E  S  A  E  E  L  G  S  W  R  K  T  L  L 233
msh24271   649 AGCCTTGGCAGAGTCAGCAGAAGAGCTGGGCTCCTGGAGGAAGACCCTCC 698
               |||  ||| || |||||||||||||||| |  ||||||| | ||||||  
pf00803   3425 AGCTCTGGAAGGGTCAGCAGAAGAGCTGTGTGCCTGGAGAAGGACCCTTT 3474
          1142  A  L  E  G  S  A  E  E  L  C  A  W  R  R  T  L  L 1158

           701 ----+----*----+----*----+----*----+----*----+----* 750
           234   R  S  C  I  Q  W  L  A  V  S  F  S  G  R  E  P   249
msh24271   699 TGCGGTCCTGTATACAGTGGCTGGCTGTGTCCTTCAGTGGCAGGGAGCCA 748
               ||  ||||||| |  ||||||||   ||||| ||||||||  |  ||| |
pf00803   3475 TGGAGTCCTGTGTGAAGTGGCTGATCGTGTCTTTCAGTGGTGGACAGCAA 3524
          1159   E  S  C  V  K  W  L  I  V  S  F  S  G  G  Q  Q   1174

           751 ----+----*----+----*----+----*----+----*----+----* 800
           250 E  D  E  N  T  Q  E  H  E  K  A  M  L  V  R  L  S  266
msh24271   749 GAAGATGAAAACACCCAGGAGCACGAGAAGGCAATGCTGGTCCGGTTAAG 798
               || ||||| || || ||| | || ||||||| ||||||| |  | |||| 
pf00803   3525 GATGATGATAATACTCAGAATCAGGAGAAGGAAATGCTGCTTAGATTAAA 3574
          1175 D  D  D  N  T  Q  N  Q  E  K  E  M  L  L  R  L  N  1191

           801 ----+----*----+----*----+----*----+----*----+----* 850
           267  E  L  L  H  A  V  K  E  V  D  P  G  D  W  Q  Q  F 283
msh24271   799 CGAGTTGTTGCATGCGGTTAAGGAGGTTGACCCTGGTGACTGGCAGCAGT 848
                | ||||||||||||  |||| || ||||| ||||||||||||||| | |
pf00803   3575 TGCGTTGTTGCATGCACTTAATGAAGTTGATCCTGGTGACTGGCAGAAAT 3624
          1192  A  L  L  H  A  L  N  E  V  D  P  G  D  W  Q  K  F 1208

           851 ----+----*----+----*----+----*----+----*----+----* 900
           284   V  K  T  G  L  K  F  R  Y  H  D  L  T  F  L  K   299
msh24271   849 TTGTGAAGACAGGACTCAAATTTCGGTACCATGACCTCACCTTTTTGAAG 898
               | |||||||  |||||||||||||||||||| |||| ||| ||||| |||
pf00803   3625 TCGTGAAGAAGGGACTCAAATTTCGGTACCAGGACCACACATTTTTAAAG 3674
          1209   V  K  K  G  L  K  F  R  Y  Q  D  H  T  F  L  K   1224

           901 ----+----*----+----*----+----*----+----*----+----* 950
           300 T  L  L  S  A  T  K  L  L  Y  G  P  E  S  S  G  R  316
msh24271   899 ACTCTGCTCAGTGCCACAAAGCTCCTGTATGGTCCAGAAAGCTCTGGGCG 948
               |  || ||||  |||  | ||||||||||  | ||||||||||| | |||
pf00803   3675 ATGCTCCTCACCGCCGTACAGCTCCTGTACAGCCCAGAAAGCTCCGTGCG 3724
          1225 M  L  L  T  A  V  Q  L  L  Y  S  P  E  S  S  V  R  1241

           951 ----+----*----+----*----+----*----+----*----+----* 1000
           317  T  K  L  V  Q  L  S  V  V  H  M  M  L  T  Q  H  S 333
msh24271   949 CACGAAACTTGTCCAGCTTTCAGTGGTCCACATGATGCTCACCCAGCACT 998
               |||||| ||  |||||||  | |||||| || |||||||||  |||||||
pf00803   3725 CACGAAGCTCATCCAGCTCCCGGTGGTCTACGTGATGCTCATGCAGCACT 3774
          1242  T  K  L  I  Q  L  P  V  V  Y  V  M  L  M  Q  H  S 1258

          1001 ----+----*----+----*----+----*----+----*----+----* 1050
           334   L  F  L  P  T  M  L  S  S  E  E  E  E  T  P  D   349
msh24271   999 CTCTGTTTTTGCCAACCATGTTGTCATCTGAAGAAGAGGAAACTCCAGAC 1048
               | |||||| |||| ||  |  || | ||||| | |||||| |  || |||
pf00803   3775 CGCTGTTTCTGCCGACTCTACTGACGTCTGACGGAGAGGAGAGCCCGGAC 3824
          1259   L  F  L  P  T  L  L  T  S  D  G  E  E  S  P  D   1274

          1051 ----+----*----+----*----+----*----+----*----+----* 1100
           350 S  G  V  K  E  T  L  L  D  L  M  S  T  V  V  R  L  366
msh24271  1049 AGTGGAGTAAAAGAAACCCTGCTGGACCTGATGTCCACAGTGGTGAGGCT 1098
               ||   |||||||||| | ||| |||||||||||   || ||||||  | |
pf00803   3825 AGCCAAGTAAAAGAAGCGCTGGTGGACCTGATGCTGACGGTGGTGGAGAT 3874
          1275 S  Q  V  K  E  A  L  V  D  L  M  L  T  V  V  E  M  1291

          1101 ----+----*----+----*----+----*----+----*----+----* 1150
           367  C  P  S  V  C  Q  S  S  H  F  A  V  L  L  G  T  Y 383
msh24271  1099 GTGCCCTTCTGTCTGTCAGAGCAGCCACTTTGCTGTGCTACTTGGGACCT 1148
               |||||| ||||||||| |||||||||||||||| ||||| || ||| |||
pf00803   3875 GTGCCCCTCTGTCTGTGAGAGCAGCCACTTTGCAGTGCTTCTCGGGGCCT 3924
          1292  C  P  S  V  C  E  S  S  H  F  A  V  L  L  G  A  Y 1308

          1151 ----+----*----+----*----+----*----+----*----+----* 1200
           384   S  A  T  L  S  V  L  D  Q  K  I  L  L  L  L  R   399
msh24271  1149 ACAGTGCCACCCTCAGTGTGCTGGACCAGAAGATTTTACTTCTCCTCCGT 1198
               |  | ||||| ||||| || || || ||||||||||||||||| || || 
pf00803   3925 ATGGCGCCACTCTCAGCGTCCTAGATCAGAAGATTTTACTTCTGCTTCGA 3974
          1309   G  A  T  L  S  V  L  D  Q  K  I  L  L  L  L  R   1324

          1201 ----+----*----+----*----+----*----+----*----+----* 1250
           400 A  Y  E  Q  N  N  L  S  L  I  S  F  R  V  L  L  W  416
msh24271  1199 GCATATGAACAGAACAACCTCAGCCTCATCAGTTTCAGGGTTCTGCTGTG 1248
               || ||||| |||||||| |||||||||||||  |||||||| ||||||||
pf00803   3975 GCGTATGAGCAGAACAAGCTCAGCCTCATCAACTTCAGGGTGCTGCTGTG 4024
          1325 A  Y  E  Q  N  K  L  S  L  I  N  F  R  V  L  L  W  1341

          1251 ----+----*----+----*----+----*----+----*----+----* 1300
           417  G  P  A  A  V  E  H  H  K  T  C  R  S  L  G  K  S 433
msh24271  1249 GGGCCCAGCAGCAGTGGAACATCACAAGACATGCCGGAGCCTGGGCAAGT 1298
               ||||||||| || ||||| ||||||||||| |||||||||||||||| ||
pf00803   4025 GGGCCCAGCGGCCGTGGAGCATCACAAGACGTGCCGGAGCCTGGGCAGGT 4074
          1342  G  P  A  A  V  E  H  H  K  T  C  R  S  L  G  R  S 1358

          1301 ----+----*----+----*----+----*----+----*----+----* 1350
           434   L  W  Q  Q  P  S  V  G  D  I  L  R  L  L  D  P   449
msh24271  1299 CACTTTGGCAGCAGCCAAGCGTTGGGGACATCCTCCGCCTGCTGGACCCA 1348
               |||| ||||||||||| || || ||||||||||| |||||||||||||  
pf00803   4075 CACTGTGGCAGCAGCCGAGTGTCGGGGACATCCTTCGCCTGCTGGACCGG 4124
          1359   L  W  Q  Q  P  S  V  G  D  I  L  R  L  L  D  R   1374

          1351 ----+----*----+----*----+----*----+----*----+----* 1400
           450 D  R  M  M  Q  T  I  L  H  F  P  Q  Y  R  K  L  L  466
msh24271  1349 GACCGGATGATGCAGACCATCCTGCACTTCCCGCAGTACCGGAAGCTGCT 1398
               |||||||||||||||||||||||||||||||| ||| |||||| ||||||
pf00803   4125 GACCGGATGATGCAGACCATCCTGCACTTCCCCCAGAACCGGAGGCTGCT 4174
          1375 D  R  M  M  Q  T  I  L  H  F  P  Q  N  R  R  L  L  1391

          1401 ----+----*----+----*----+----*----+----*----+----* 1450
           467  P  T  E  D  T  G  E  P  L  V  F  K  D  K  T  A  R 483
msh24271  1399 GCCCACGGAGGACACAGGGGAGCCACTGGTGTTTAAGGACAAGACTGCGA 1448
               |||| | |||||||||  ||||   ||| | || || ||||| |     |
pf00803   4175 GCCCCCCGAGGACACACAGGAG...CTGATATTCAAAGACAAAAGC...A 4218
          1392  P  P  E  D  T  Q  E  .  L  I  F  K  D  K  S  .  R 1406

          1451 ----+----*----+----*----+----*----+----*----+----* 1500
           484   V  D  L  D  S  L  Y  D  P  C  F  L  L  H  L  F   499
msh24271  1449 GAGTGGACCTCGACAGCCTCTATGACCCCTGCTTTCTTCTCCATCTCTTT 1498
               | ||||| || ||  |||||||||||||||||||||| || || ||||| 
pf00803   4219 GGGTGGATCTTGATGGCCTCTATGACCCCTGCTTTCTCCTTCAGCTCTTC 4268
          1407   V  D  L  D  G  L  Y  D  P  C  F  L  L  Q  L  F   1422

          1501 ----+----*----+----*----+----*----+----*----+----* 1550
           500 G  E  L  T  R  P  E  F  V  V  D  C  R  K  F  L  D  516
msh24271  1499 GGGGAACTGACCAGGCCAGAGTTTGTGGTGGATTGTCGAAAATTTTTGGA 1548
                | || ||||||||||||||||||||||||||||||||||||||||||||
pf00803   4269 AGTGAGCTGACCAGGCCAGAGTTTGTGGTGGATTGTCGAAAATTTTTGGA 4318
          1423 S  E  L  T  R  P  E  F  V  V  D  C  R  K  F  L  D  1439

          1551 ----+----*----+----*----+----*----+----*----+----* 1600
           517  S  N  A  L  G  L  T  V  A  A  L  S  S  Y  D  P  Q 533
msh24271  1549 CTCAAACGCCCTGGGTTTAACTGTGGCAGCCCTCAGCAGCTACGACCCCC 1598
                ||||| || |||||  |||||||  |||||||||||||||| |||||||
pf00803   4319 TTCAAATGCTCTGGGCCTAACTGTCACAGCCCTCAGCAGCTATGACCCCC 4368
          1440  S  N  A  L  G  L  T  V  T  A  L  S  S  Y  D  P  Q 1456

          1601 ----+----*----+----*----+----*----+----*----+----* 1650
           534   M  R  A  A  A  Y  Y  V  L  A  A  Y  Y  S  H  L   549
msh24271  1599 AGATGCGAGCTGCAGCCTACTATGTCCTCGCAGCCTACTACTCACACCTG 1648
               ||||||||||   ||||||| ||||||| || ||||||||||| ||| ||
pf00803   4369 AGATGCGAGCCATAGCCTACCATGTCCTGGCGGCCTACTACTCGCACTTG 4418
          1457   M  R  A  I  A  Y  H  V  L  A  A  Y  Y  S  H  L   1472

          1651 ----+----*----+----*----+----*----+----*----+----* 1700
           550 E  G  A  R  F  R  E  Q  S  Q  V  L  Y  L  L  D  V  566
msh24271  1649 GAGGGAGCTCGCTTCCGGGAACAGTCCCAAGTTCTGTACCTGCTCGATGT 1698
               ||||| || || ||||  || ||||||||  | || |||||| | |||||
pf00803   4419 GAGGGCGCACGGTTCCAAGAGCAGTCCCAGCTACTTTACCTGTTGGATGT 4468
          1473 E  G  A  R  F  Q  E  Q  S  Q  L  L  Y  L  L  D  V  1489

          1701 ----+----*----+----*----+----*----+----*----+----* 1750
           567  V  R  N  G  I  R  T  P  N  L  R  L  P  F  T  V  A 583
msh24271  1699 TGTCCGCAATGGGATTAGAACTCCAAACCTGAGGCTCCCTTTCACCGTGG 1748
                ||||| ||||||||| ||||||   || |||| ||  |||| ||| |||
pf00803   4469 AGTCCGGAATGGGATTCGAACTCAGGACATGAGACTTACTTTTACCTTGG 4518
          1490  V  R  N  G  I  R  T  Q  D  M  R  L  T  F  T  L  A 1506

          1751 ----+----*----+----*----+----*----+----*----+----* 1800
           584   L  F  I  A  K  A  A  V  Q  I  L  K  P  E  E  H   599
msh24271  1749 CCCTTTTCATCGCCAAGGCAGCCGTGCAGATCTTGAAACCAGAGGAGCAC 1798
               | || ||||| ||||| |||||| ||||||| ||||||||||||||||||
pf00803   4519 CTCTCTTCATTGCCAAAGCAGCCCTGCAGATTTTGAAACCAGAGGAGCAC 4568
          1507   L  F  I  A  K  A  A  L  Q  I  L  K  P  E  E  H   1522

          1801 ----+----*----+----*----+----*----+----*----+----* 1850
           600 M  Y  W  K  I  S  K  F  L  L  S  H  E  N  L  N  M  616
msh24271  1799 ATGTACTGGAAGATCAGCAAGTTCCTGCTGTCACACGAGAACTTGAACAT 1848
               ||||||  |||| ||||||| ||||||||||| || ||| ||||||||||
pf00803   4569 ATGTACCTGAAGGTCAGCAACTTCCTGCTGTCGCATGAGTACTTGAACAT 4618
          1523 M  Y  L  K  V  S  N  F  L  L  S  H  E  Y  L  N  M  1539

          1851 ----+----*----+----*----+----*----+----*----+----* 1900
           617  D  K  L  P  G  F  Y  Q  F  F  Y  S  S  D  F  Q  Q 633
msh24271  1849 GGACAAACTGCCAGGCTTCTACCAGTTCTTCTACAGCTCTGACTTCCAGC 1898
               ||||||| ||||||||||||||||||||||||||||||| |||||  |||
pf00803   4619 GGACAAAGTGCCAGGCTTCTACCAGTTCTTCTACAGCTCCGACTTTGAGC 4668
          1540  D  K  V  P  G  F  Y  Q  F  F  Y  S  S  D  F  E  Q 1556

          1901 ----+----*----+----*----+----*----+----*----+----* 1950
           634   K  T  E  Q  E  W  V  L  E  I  L  R  Q  G  I  R   649
msh24271  1899 AAAAAACTGAACAAGAATGGGTGTTGGAAATTCTACGGCAGGGGATTAGA 1948
               ||||||| || ||  | |||||||| |   |||| |||||||||||  | 
pf00803   4669 AAAAAACAGAGCAGAAGTGGGTGTTTGGCCTTCTGCGGCAGGGGATCCGT 4718
          1557   K  T  E  Q  K  W  V  F  G  L  L  R  Q  G  I  R   1572

          1951 ----+----*----+----*----+----*----+----*----+----* 2000
           650 D  K  H  C  Y  E  L  C  S  R  R  G  V  F  H  I  I  666
msh24271  1949 GACAAGCACTGCTATGAGCTATGCTCTAGAAGAGGCGTGTTCCACATCAT 1998
               |||||||| ||||| || || ||  |  |  | ||| | |||||||||||
pf00803   4719 GACAAGCAGTGCTACGAACTGTGTGCCCGGCGTGGCATCTTCCACATCAT 4768
          1573 D  K  Q  C  Y  E  L  C  A  R  R  G  I  F  H  I  I  1589

          2001 ----+----*----+----*----+----*----+----*----+----* 2050
           667  L  S  F  F  N  S  P  L  C  D  E  V  A  Q  N  W  I 683
msh24271  1999 CCTGTCCTTCTTCAATAGCCCCTTGTGTGACGAAGTTGCTCAGAATTGGA 2048
               ||||||||||||| | |||||  |||||||||| |  || ||||||||||
pf00803   4769 CCTGTCCTTCTTCCACAGCCCGCTGTGTGACGAGGCAGCACAGAATTGGA 4818
          1590  L  S  F  F  H  S  P  L  C  D  E  A  A  Q  N  W  I 1606

          2051 ----+----*----+----*----+----*----+----*----+----* 2100
           684   L  E  I  L  Q  N  V  A  H  I  T  R  S  A  Y  E   699
msh24271  2049 TTCTGGAAATCCTGCAGAATGTTGCCCACATCACCAGATCTGCCTATGAA 2098
               |||||||||| || ||||||| ||||||  |  |||||||||| ||||||
pf00803   4819 TTCTGGAAATTCTACAGAATGCTGCCCAGGTTGCCAGATCTGCGTATGAA 4868
          1607   L  E  I  L  Q  N  A  A  Q  V  A  R  S  A  Y  E   1622

          2101 ----+----*----+----*----+----*----+----*----+----* 2150
           700 V  I  R  D  Y  S  L  L  T  W  V  L  H  I  L  E  S  716
msh24271  2099 GTCATACGTGACTATAGCCTTTTAACGTGGGTTTTACACATCCTTGAGAG 2148
                ||||||| ||||||||||||||||| ||| |||||||||||||||| ||
pf00803   4869 ATCATACGAGACTATAGCCTTTTAACATGGATTTTACACATCCTTGAAAG 4918
          1623 I  I  R  D  Y  S  L  L  T  W  I  L  H  I  L  E  S  1639

          2151 ----+----*----+----*----+----*----+----*----+----* 2200
           717  R  F  V  E  T  Q  L  L  S  N  V  I  S  L  L  H  T 733
msh24271  2149 CAGATTTGTAGAGACTCAGCTGCTGTCCAACGTGATCTCCTTGTTACACA 2198
               ||  ||| | ||||||| ||||||||| || |||||||||||| ||||||
pf00803   4919 CAAGTTTCTGGAGACTCCGCTGCTGTCTAATGTGATCTCCTTGCTACACA 4968
          1640  K  F  L  E  T  P  L  L  S  N  V  I  S  L  L  H  T 1656

          2201 ----+----*----+----*----+----*----+----*----+----* 2250
           734   L  W  V  T  N  L  G  N  K  A  P  E  E  R  S  Q   749
msh24271  2199 CCCTGTGGGTGACCAACCTGGGCAACAAAGCGCCGGAGGAGAGAAGCCAG 2248
               | ||||||||||||||||||||  |||| ||   ||||  |   ||||||
pf00803   4969 CACTGTGGGTGACCAACCTGGGGGACAAGGCAGTGGAGTGGGAGAGCCAG 5018
          1657   L  W  V  T  N  L  G  D  K  A  V  E  W  E  S  Q   1672

          2251 ----+----*----+----*----+----*----+----*----+----* 2300
           750 P  P  G  Q  V  G  S  Q  E  S  E  K  M  L  A  L  H  766
msh24271  2249 CCACCTGGCCAGGTCGGCTCCCAGGAATCCGAGAAGATGCTTGCCTTGCA 2298
               |  | | |||||    ||||||||||  | |  |||  ||||||| ||||
pf00803   5019 CGCCTTTGCCAGCCTAGCTCCCAGGAGCCTGCCAAGCGGCTTGCCCTGCA 5068
          1673 R  L  C  Q  P  S  S  Q  E  P  A  K  R  L  A  L  H  1689

          2301 ----+----*----+----*----+----*----+----*----+----* 2350
           767  M  V  S  E  F  L  Y  V  L  I  A  L  T  K  H  L  R 783
msh24271  2299 CATGGTCAGTGAGTTCCTGTATGTCCTCATTGCGCTTACAAAGCACCTGA 2348
               | |||||| ||||||||| ||||| ||||| | ||| |  ||||||||||
pf00803   5069 CCTGGTCAATGAGTTCCTTTATGTTCTCATCGTGCTCATGAAGCACCTGA 5118
          1690  L  V  N  E  F  L  Y  V  L  I  V  L  M  K  H  L  R 1706

          2351 ----+----*----+----*----+----*----+----*----+----* 2400
           784   P  T  L  A  S  A  Q  L  M  N  F  F  W  T  L  E   799
msh24271  2349 GGCCCACCTTGGCTTCTGCCCAGCTGATGAACTTCTTTTGGACACTTGAA 2398
               |||||||||||||  | | ||||||||  ||||||||  |||||||||| 
pf00803   5119 GGCCCACCTTGGCCCCCGTCCAGCTGACCAACTTCTTCGGGACACTTGAC 5168
          1707   P  T  L  A  P  V  Q  L  T  N  F  F  G  T  L  D   1722

          2401 ----+----*----+----*----+----*----+----*----+----* 2450
           800 S  V  L  S  Y  R  A  T  I  I  K  L  F  K  D  M  G  816
msh24271  2399 TCTGTGCTGAGTTATCGGGCCACCATCATAAAATTATTCAAGGACATGGG 2448
               || |||||||| || ||||||||  ||||| |    || | |||||||  
pf00803   5169 TCCGTGCTGAGGTACCGGGCCACTGTCATACAGGCCTTTAGGGACATGAA 5218
          1723 S  V  L  R  Y  R  A  T  V  I  Q  A  F  R  D  M  N  1739

          2451 ----+----*----+----*----+----*----+----*----+----* 2500
           817  R  F  T  V  N  K  V  A  L  S  T  K  D  V  L  I  L 833
msh24271  2449 CCGATTCACTGTGAACAAGGTGGCACTTTCTACCAAAGATGTCCTGATCC 2498
               | ||||||| || ||  ||   |  ||||| ||||| || |||||  |||
pf00803   5219 CAGATTCACCGTAAATGAGACAGTGCTTTCCACCAAGGACGTCCTTGTCC 5268
          1740  R  F  T  V  N  E  T  V  L  S  T  K  D  V  L  V  L 1756

          2501 ----+----*----+----*----+----*----+----*----+----* 2550
           834   L  H  K  W  S  L  I  E  R  D  T  K  L  Q  G  E   849
msh24271  2499 TCTTACACAAGTGGAGCCTCATTGAAAGAGACACGAAGCTCCAAGGAGAG 2548
               |||| |||||||||||||||||||||||||||   |||||||| | ||| 
pf00803   5269 TCTTGCACAAGTGGAGCCTCATTGAAAGAGACCTCAAGCTCCAGGAAGAC 5318
          1757   L  H  K  W  S  L  I  E  R  D  L  K  L  Q  E  D   1772

          2551 ----+----*----+----*----+----*----+----*----+----* 2600
           850 L  K  A  V  I  E  Q  H  Q  A  K  D  L  M  K  M  L  866
msh24271  2549 CTGAAAGCAGTCATTGAGCAGCACCAAGCCAAGGACCTAATGAAAATGCT 2598
               |||| ||||| ||||||| ||  |||||||  ||| || |||||||||||
pf00803   5319 CTGAGAGCAGCCATTGAGAAGGCCCAAGCCCGGGAGCTCATGAAAATGCT 5368
          1773 L  R  A  A  I  E  K  A  Q  A  R  E  L  M  K  M  L  1789

          2601 ----+----*----+----*----+----*----+----*----+----* 2650
           867  K  D  K  S  R  P  V  V  A  A  Q  A  R  G  P  R  G 883
msh24271  2599 CAAGGATAAGAGCAGGCCTGTGGTAGCTGCCCAGGCCCGAGGCCCACGAG 2648
               ||||||||||| || ||||||  |  | ||||  |||  ||||||||| |
pf00803   5369 CAAGGATAAGAACAAGCCTGTCATGCCAGCCCGAGCCAAAGGCCCACGGG 5418
          1790  K  D  K  N  K  P  V  M  P  A  R  A  K  G  P  R  G 1806

          2651 ----+----*----+----*----+----*----+----*----+----* 2700
           884   R  K  R  R  H  G  G  L  E  E  T  A  E  P  Q  L   899
msh24271  2649 GCCGGAAGAGGAGGCATGGAGGGCTGGAGGAGACTGCTGAGCCCCAGCTG 2698
               |||| |||||||||| ||| | |   |||||||  ||||| ||  |||||
pf00803   5419 GCCGAAAGAGGAGGCCTGGGGAGGCAGAGGAGATGGCTGACCCTGAGCTG 5468
          1807   R  K  R  R  P  G  E  A  E  E  M  A  D  P  E  L   1822

          2701 ----+----*----+----*----+----*----+----*----+----* 2750
           900 E  A  S  C  L  E  K  C  K  D  L  L  R  A  T  L  T  916
msh24271  2699 GAAGCATCTTGCTTGGAGAAATGCAAGGACCTCCTGAGGGCCACACTGAC 2748
                  ||||||  |||||||| |||||||| |||||||||| |||   ||||
pf00803   5469 ATGGCATCTACCTTGGAGACATGCAAGGGCCTCCTGAGGTCCATCTTGAC 5518
          1823 M  A  S  T  L  E  T  C  K  G  L  L  R  S  I  L  T  1839

          2751 ----+----*----+----*----+----*----+----*----+----* 2800
           917  H  W  G  P  G  D  P  L  P  G  P  T  Q  G  S  V  G 933
msh24271  2749 CCACTGGGGGCCCGGTGACCCCTTGCCTGGTCCCACACAGGGGTCTGTGG 2798
                 ||||| | || |    |||    ||||  ||||| |||| | ||||||
pf00803   5519 TTACTGGAGACCAGTGATCCCTGGTCCTGACCCCACTCAGGAGCCTGTGG 5568
          1840  Y  W  R  P  V  I  P  G  P  D  P  T  Q  E  P  V  D 1856

          2801 ----+----*----+----*----+----*----+----*----+----* 2850
           934   Q  T  I  P  K  S  K  T  L  S  S  A  H  A  A  V   949
msh24271  2799 GCCAGACTATCCCCAAGAGTAAAACACTGAGCTCTGCGCATGCTGCTGTT 2848
                |    | | |||| ||||  |  | |   || | |   ||||||| | |
pf00803   5569 ACTCAGCCAGCCCCGAGAGCGATGCGCCAGGCCCCGTATATGCTGCCGCT 5618
          1857   S  A  S  P  E  S  D  A  P  G  P  V  Y  A  A  A   1872

          2851 ----+----*----+----*----+----*----+----*----+----* 2900
           950 S  L  V  A  S  W  V  L  R  S  L  A  E  R  P  V  S  966
msh24271  2849 TCTTTGGTGGCCAGCTGGGTGCTTCGGTCATTGGCTGAGCGCCCTGTCAG 2898
               ||  |||  | ||| |||||||| |||||  |||| |||| |||  ||||
pf00803   5619 TCCCTGGCAGTCAGTTGGGTGCTGCGGTCGGTGGCCGAGCACCCGCTCAG 5668
          1873 S  L  A  V  S  W  V  L  R  S  V  A  E  H  P  L  S  1889

          2901 ----+----*----+----*----+----*----+----*----+----* 2950
           967  R  A  E  V  T  R  L  L  D  W  L  K  S  H  I  L  P 983
msh24271  2899 CAGGGCAGAGGTCACAAGACTCCTTGACTGGCTCAAGAGCCACATTTTGC 2948
               |||||||||||   || ||||| ||| |||||| |||||||| |||||||
pf00803   5669 CAGGGCAGAGGCTGCAGGACTCATTGGCTGGCTTAAGAGCCATATTTTGC 5718
          1890  R  A  E  A  A  G  L  I  G  W  L  K  S  H  I  L  P 1906

          2951 ----+----*----+----*----+----*----+----*----+----* 3000
           984   Q  P  M  V  V  A  D  L  L  G  D  S  A  V  K  T   999
msh24271  2949 CACAGCCAATGGTAGTAGCTGACCTTCTCGGGGACAGCGCCGTGAAGACT 2998
               |||| ||  |||| || |||||||| ||   |||||| ||||||| ||  
pf00803   5719 CACACCCTGTGGTCGTGGCTGACCTCCTTAAGGACAGTGCCGTGAGGAGC 5768
          1907   H  P  V  V  V  A  D  L  L  K  D  S  A  V  R  S   1922

          3001 ----+----*----+----*----+----*----+----*----+----* 3050
          1000 G  I  F  K  L  Y  N  H  H  C  S  A  Q  G  L  V  G  1016
msh24271  2999 GGCATCTTTAAGCTGTATAATCATCACTGCAGTGCCCAGGGCCTCGTGGG 3048
                |||| || | ||||||||  |  | |||  | ||  |||| || |  ||
pf00803   5769 AGCATATTCAGGCTGTATAGCCGGCTCTGTGGGGCTGAGGGGCTGGCAGG 5818
          1923 S  I  F  R  L  Y  S  R  L  C  G  A  E  G  L  A  G  1939

          3051 ----+----*----+----*----+----*----+----*----+----* 3100
          1017  P  A  Q  D  V  A  C  K  F  S  T  V  M  L  Q  L  L 1033
msh24271  3049 ACCTGCACAGGATGTGGCCTGCAAGTTCAGCACGGTCATGCTGCAGTTGT 3098
                ||||  ||||| |||||||||  |||||  ||||||||||||||| || 
pf00803   5819 GCCTGTGCAGGAGGTGGCCTGCCTGTTCAATACGGTCATGCTGCAGCTGG 5868
          1940  P  V  Q  E  V  A  C  L  F  N  T  V  M  L  Q  L  V 1956

          3101 ----+----*----+----*----+----*----+----*----+----* 3150
          1034   V  A  Q  G  R  K  E  S  P  F  H  S  V  A  E  A   1049
msh24271  3099 TGGTGGCCCAGGGCCGGAAAGAGAGCCCTTTCCACTCGGTGGCAGAGGCC 3148
               |||  ||||||||||||  || |||||| |||||| |||     || |||
pf00803   5869 TGGCTGCCCAGGGCCGGGCAGGGAGCCCCTTCCACCCGGCCATGGAAGCC 5918
          1957   A  A  Q  G  R  A  G  S  P  F  H  P  A  M  E  A   1972

          3151 ----+----*----+----*----+----*----+----*----+----* 3200
          1050 L  C  L  D  S  L  N  E  K  E  E  A  K  R  A  P  A  1066
msh24271  3149 CTGTGCCTTGATTCTCTGAATGAAAAGGAAGAAGCCAAACGAGCTCCTGC 3198
               || | |||   |||||||| ||| ||||| ||||||| || |||  | ||
pf00803   5919 CTCTCCCTGTCTTCTCTGAGTGAGAAGGATGAAGCCACACAAGCCTCCGC 5968
          1973 L  S  L  S  S  L  S  E  K  D  E  A  T  Q  A  S  A  1989

          3201 ----+----*----+----*----+----*----+----*----+----* 3250
          1067  A  F  L  V  S  L  Y  V  K  D  M  W  L  G  A  Q  Q 1083
msh24271  3199 AGCGTTCCTGGTGTCTCTGTATGTTAAGGACATGTGGCTGGGGGCCCAGC 3248
               ||| ||||| |||||||| ||  | |||||||| ||||||||||| ||||
pf00803   5969 AGCATTCCTAGTGTCTCTCTACATAAAGGACATCTGGCTGGGGGCTCAGC 6018
          1990  A  F  L  V  S  L  Y  I  K  D  I  W  L  G  A  Q  R 2006

          3251 ----+----*----+----*----+----*----+----*----+----* 3300
          1084   P  D  T  F  L  A  H  I  R  M  V  C  E  A  A  K   1099
msh24271  3249 AGCCAGATACCTTCCTTGCTCACATCCGAATGGTCTGTGAGGCTGCAAAG 3298
                ||| || ||| || |  | ||| |||| ||||| |||||||| ||| | 
pf00803   6019 GGCCGGACACCCTCTTAACCCACGTCCGGATGGTGTGTGAGGCCGCAGAT 6068
          2007   P  D  T  L  L  T  H  V  R  M  V  C  E  A  A  D   2022

          3301 ----+----*----+----*----+----*----+----*----+----* 3350
          1100 D  V  P  L  D  E  P  E  A  I  V  V  L  C  R  N  V  1116
msh24271  3299 GACGTGCCACTTGATGAGCCCGAGGCCATTGTTGTGCTCTGCAGGAACGT 3348
               || |  ||      |||    |||||||| || |||||||||| | ||| 
pf00803   6069 GATGCCCCGAGCAGTGAAGAGGAGGCCATCGTGGTGCTCTGCAAGGACGC 6118
          2023 D  A  P  S  S  E  E  E  A  I  V  V  L  C  K  D  A  2039

          3351 ----+----*--- 3363
          1117  D  S  S  A   1120
msh24271  3349 GGACTCCTCAGCC 3361
                | |  | |||||
pf00803   6119 CGCCAGCGCAGCC 6131
          2040  A  S  A  A   2043