Comparison of KIAA cDNA sequences between mouse and human (FLJ00267)
<<Original sequence data>>
mouse mFLJ00267 (msh24166) length: 3646 bp, CDS: 3 - 2747
human (sj04085) length: 4393 bp, CDS: 295 - 3627
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 881 - 882 2 0 0.0
CDS: 883 - 3651 2179 551 20.2
3'UTR: 3652 - 4589 482 249 34.1
amino acid
CDS: 883 - 3651 663 252 27.5
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
msh24166 1 .................................................. 1
sj04085 1 GTTAAGGAGCTGCACTGCTTCCTGCCCCCTAAAGCTGAGCGGGGCGAGGA 50
51 ----+----*----+----*----+----*----+----*----+----* 100
msh24166 1 .................................................. 1
sj04085 51 GGGCGAGTGCCAGGCTGGGCCACGAGACACAGGACACAATTTCTTGCCAG 100
101 ----+----*----+----*----+----*----+----*----+----* 150
msh24166 1 .................................................. 1
sj04085 101 GGTCCTGGTAGCTTCCTCTTCAACAGCCACTTCCGTGTGGCCGGGGCCCC 150
151 ----+----*----+----*----+----*----+----*----+----* 200
msh24166 1 .................................................. 1
sj04085 151 AGGGGCAGGAGCTGCTGCCCGTTGCCCAGGCCACCCTCCACCCCCAATTG 200
201 ----+----*----+----*----+----*----+----*----+----* 250
msh24166 1 .................................................. 1
sj04085 201 GGAGCCCTGCCCCCCTGGGGCCGGGCCAAGCCCAGCAGCTGGCTGGGATC 250
251 ----+----*----+----*----+----*----+----*----+----* 300
msh24166 1 .................................................. 1
sj04085 251 CCATGGGGGACTGGTAGGGCACAGGTCTTGGGGGATAGAGGTGACCGGGC 300
P G
301 ----+----*----+----*----+----*----+----*----+----* 350
msh24166 1 .................................................. 1
sj04085 301 CAGTGCCCTGGGGCTCTGGCCATGAAGTCTCGGCAGAAAGGAAAGAAGAA 350
Q C P G A L A M K S R Q K G K K K
351 ----+----*----+----*----+----*----+----*----+----* 400
msh24166 1 .................................................. 1
sj04085 351 GGGCAGCGCAAAGGAGCGGGTTTTTGGGTGCGACTTGCAGGAGCACCTGC 400
G S A K E R V F G C D L Q E H L Q
401 ----+----*----+----*----+----*----+----*----+----* 450
msh24166 1 .................................................. 1
sj04085 401 AGCACTCAGGCCAGGAGGTGCCCCAGGTGCTAAAGAGCTGTGCAGAATTT 450
H S G Q E V P Q V L K S C A E F
451 ----+----*----+----*----+----*----+----*----+----* 500
msh24166 1 .................................................. 1
sj04085 451 GTGGAGGAGTATGGAGTGGTGGATGGGATCTACCGCCTCTCAGGGGTCTC 500
V E E Y G V V D G I Y R L S G V S
501 ----+----*----+----*----+----*----+----*----+----* 550
msh24166 1 .................................................. 1
sj04085 501 CTCCAACATCCAGAAGCTTCGGCAGGAATTTGAGTCAGAGCGGAAGCCAG 550
S N I Q K L R Q E F E S E R K P D
551 ----+----*----+----*----+----*----+----*----+----* 600
msh24166 1 .................................................. 1
sj04085 551 ACCTGCGTCGGGATGTTTACCTCCAAGACATTCACTGCGTCTCCTCCCTG 600
L R R D V Y L Q D I H C V S S L
601 ----+----*----+----*----+----*----+----*----+----* 650
msh24166 1 .................................................. 1
sj04085 601 TGCAAGGCCTATTTCAGAGAACTGCCGGATCCCCTGCTCACTTACCGGCT 650
C K A Y F R E L P D P L L T Y R L
651 ----+----*----+----*----+----*----+----*----+----* 700
msh24166 1 .................................................. 1
sj04085 651 CTATGACAAGTTTGCTGAGGCTGTAGGAGTGCAATTGGAACCTGAGCGCT 700
Y D K F A E A V G V Q L E P E R L
701 ----+----*----+----*----+----*----+----*----+----* 750
msh24166 1 .................................................. 1
sj04085 701 TGGTCAAGATCCTAGAGGTGCTTCGGGAACTCCCTGTCCCAAACTACAGG 750
V K I L E V L R E L P V P N Y R
751 ----+----*----+----*----+----*----+----*----+----* 800
msh24166 1 .................................................. 1
sj04085 751 ACCCTGGAGTTCCTCATGAGGCACTTGGTACACATGGCCTCATTCAGTGC 800
T L E F L M R H L V H M A S F S A
801 ----+----*----+----*----+----*----+----*----+----* 850
msh24166 1 .................................................. 1
sj04085 801 CCAGACCAACATGCATGCTCGCAACCTGGCCATCGTGTGGGCTCCCAACC 850
Q T N M H A R N L A I V W A P N L
851 ----+----*----+----*----+----*----+----*----+----* 900
F N G T A A
msh24166 1 ..............................GCTTCAATGGGACAGCAGCG 20
|||||||||||||||| ||
sj04085 851 TGCTGAGGTCTAAGGACATAGAGGCCTCAGGCTTCAATGGGACAGCGGCC 900
L R S K D I E A S G F N G T A A
901 ----+----*----+----*----+----*----+----*----+----* 950
F M E V R V Q S I V V E F I L T H
msh24166 21 TTCATGGAGGTTCGAGTGCAGTCCATTGTTGTGGAGTTCATCCTTACCCA 70
||||||||||| || || || ||||| || |||||||||||||| || ||
sj04085 901 TTCATGGAGGTGCGGGTACAATCCATCGTCGTGGAGTTCATCCTCACACA 950
F M E V R V Q S I V V E F I L T H
951 ----+----*----+----*----+----*----+----*----+----* 1000
V D Q L F R G D S L S A G D L E
msh24166 71 TGTGGACCAGCTCTTTAGGGGTGACTCCCTCTCTGCTGGTGTAGACTTGG 120
||||||||||||||| |||||| ||||||||| |||| || |||
sj04085 951 CGTGGACCAGCTCTTTGGGGGTGCTGCCCTCTCTGGTGGT...GAGGTGG 997
V D Q L F G G A A L S G G E V E
1001 ----+----*----+----*----+----*----+----*----+----* 1050
S G W K S L P G A R A S G S S E
msh24166 121 AGAGTGGATGGAAATCACTTCCAGGAGCCCGGGCATCAGGCAGCTCCGAG 170
||||||| ||| ||| |||||||| ||||||||||||||||| |||||
sj04085 998 AGAGTGGGTGGCGATCGCTTCCAGGGACCCGGGCATCAGGCAGCCCCGAG 1047
S G W R S L P G T R A S G S P E
1051 ----+----*----+----*----+----*----+----*----+----* 1100
D L M P T S L P Y H L P S I L Q A
msh24166 171 GACCTCATGCCCACCTCTCTTCCCTACCACTTGCCCAGCATCTTGCAGGC 220
||||| ||||||| | || || || ||| |||| ||||| |||||||
sj04085 1048 GACCTTATGCCCAGGCCACTGCCTTATCACCTGCCTAGCATACTGCAGGC 1097
D L M P R P L P Y H L P S I L Q A
1101 ----+----*----+----*----+----*----+----*----+----* 1150
G D G P P Q I R P Y H T I I E I A
msh24166 221 TGGGGATGGACCTCCACAGATCCGACCCTACCATACTATTATTGAGATTG 270
||| |||||||| |||||||| || |||||||||||||| || |||||||
sj04085 1098 TGGCGATGGACCCCCACAGATGCGGCCCTACCATACTATCATCGAGATTG 1147
G D G P P Q M R P Y H T I I E I A
1151 ----+----*----+----*----+----*----+----*----+----* 1200
E H K R K G S L K V R K W R S I
msh24166 271 CGGAACACAAGAGAAAGGGGTCATTGAAGGTCAGGAAATGGCGCTCTATC 320
| || |||||||| |||||||| |||||||||||||| ||| | ||||||
sj04085 1148 CAGAGCACAAGAGGAAGGGGTCTTTGAAGGTCAGGAAGTGGAGGTCTATC 1197
E H K R K G S L K V R K W R S I
1201 ----+----*----+----*----+----*----+----*----+----* 1250
F N L G R S G H E T K R K L P L R
msh24166 321 TTCAATTTGGGTCGATCTGGACACGAGACAAAACGTAAACTTCCGCTGAG 370
|||||||| ||||| ||||| || ||||| || ||||||||||| | | |
sj04085 1198 TTCAATTTAGGTCGCTCTGGCCATGAGACTAAGCGTAAACTTCCACGGGG 1247
F N L G R S G H E T K R K L P R G
1251 ----+----*----+----*----+----*----+----*----+----* 1300
V E D R E E K S S K G T L R P A K
msh24166 371 GGTTGAGGACAGGGAAGAAAAATCCAGTAAGGGGACACTGCGGCCTGCCA 420
|| |||||||||||| || ||||||| ||||||||||||||||| ||||
sj04085 1248 GGCTGAGGACAGGGAGGATAAATCCAACAAGGGGACACTGCGGCCAGCCA 1297
A E D R E D K S N K G T L R P A K
1301 ----+----*----+----*----+----*----+----*----+----* 1350
S M D S L S A A A G A S D E P E
msh24166 421 AAAGCATGGACTCACTGAGTGCTGCCGCTGGGGCCAGTGACGAGCCGGAG 470
||||||||||||||||||||||||| |||||||||||||| ||||| |||
sj04085 1298 AAAGCATGGACTCACTGAGTGCTGCAGCTGGGGCCAGTGATGAGCCAGAG 1347
S M D S L S A A A G A S D E P E
1351 ----+----*----+----*----+----*----+----*----+----* 1400
G L V G S S S S Q P S S L M P E S
msh24166 471 GGGCTGGTGGGGTCCAGCAGTTCTCAGCCAAGCTCACTGATGCCTGAGAG 520
|||||||||||| ||||||| | | ||||||| || || ||||||||||
sj04085 1348 GGGCTGGTGGGGCCCAGCAGCCCCCGGCCAAGCCCATTGCTGCCTGAGAG 1397
G L V G P S S P R P S P L L P E S
1401 ----+----*----+----*----+----*----+----*----+----* 1450
L E S N S - E G E Q E P E A
msh24166 521 CTTGGAGAGTAATTCTAT.........GGAAGGTGAACAGGAGCCTGAAG 561
|||||||| ||||||| || ||||||||||||||||| |
sj04085 1398 CTTGGAGAACGATTCTATAGAGGCAGCAGAGGGTGAACAGGAGCCTGAGG 1447
L E N D S I E A A E G E Q E P E A
1451 ----+----*----+----*----+----*----+----*----+----* 1500
E A P G S A N S E P G T P R A G
msh24166 562 CAGAGGCACCGGGCAGTGCCAATTCTGAGCCGGGAACTCCACGAGCCGGG 611
|||| |||| ||| | | || ||||| || || || |||||||| |||
sj04085 1448 CAGAAGCACTGGGTGGCACAAACTCTGAACCAGGCACACCACGAGCTGGG 1497
E A L G G T N S E P G T P R A G
1501 ----+----*----+----*----+----*----+----*----+----* 1550
R S A V R A L G S S R A E R C A G
msh24166 612 CGGTCAGCTGTTCGGGCCTTAGGTAGCAGTAGAGCAGAGCGTTGTGCTGG 661
|||||||| | ||||| || ||||| | ||||| || ||||||||
sj04085 1498 CGGTCAGCCATCCGGGCTGGGGGCAGCAGCCGTGCAGAACGCTGTGCTGG 1547
R S A I R A G G S S R A E R C A G
1551 ----+----*----+----*----+----*----+----*----+----* 1600
V H I S D P Y N V N L P L H I T S
msh24166 662 TGTCCACATCTCAGACCCTTACAACGTCAACCTCCCTCTGCACATAACCT 711
|||||||||||||||||| ||||| ||||||||||| || ||||| ||||
sj04085 1548 TGTCCACATCTCAGACCCCTACAATGTCAACCTCCCGCTACACATCACCT 1597
V H I S D P Y N V N L P L H I T S
1601 ----+----*----+----*----+----*----+----*----+----* 1650
I L S V P P N I I S N V S L V R
msh24166 712 CCATCCTCAGTGTTCCTCCAAACATCATCTCTAATGTCTCCTTGGTCAGG 761
| ||||||||||| || || |||||||||||||| || ||||||| ||||
sj04085 1598 CTATCCTCAGTGTGCCCCCGAACATCATCTCTAACGTTTCCTTGGCCAGG 1647
I L S V P P N I I S N V S L A R
1651 ----+----*----+----*----+----*----+----*----+----* 1700
L T R G L E C P A L Q P R P S P A
msh24166 762 CTCACCCGAGGCCTTGAGTGCCCTGCCCTACAACCCCGGCCAAGCCCTGC 811
|||||||| ||||||||||||||||| ||||| | |||||||||||||||
sj04085 1648 CTCACCCGTGGCCTTGAGTGCCCTGCTCTACAGCACCGGCCAAGCCCTGC 1697
L T R G L E C P A L Q H R P S P A
1701 ----+----*----+----*----+----*----+----*----+----* 1750
S G P G P G P G L G P G P P D E K
msh24166 812 CTCGGGTCCTGGCCCTGGCCCAGGCCTTGGCCCTGGCCCCCCAGATGAGA 861
||| || |||||||||||||| |||||||||||||||||||||||||| |
sj04085 1698 CTCTGGCCCTGGCCCTGGCCCTGGCCTTGGCCCTGGCCCCCCAGATGAAA 1747
S G P G P G P G L G P G P P D E K
1751 ----+----*----+----*----+----*----+----*----+----* 1800
S E A R S V P G P L D D S S P A
msh24166 862 AATCAGAGGCAAGATCAGTCCCAGGTCCCCTGGATGACTCGAGCCCTGCA 911
| | || ||||| ||| | || ||||||||| ||||| |||| |
sj04085 1748 AGTTGGAAGCAAGTCCAGCCTCAAGTCCCCTGGCAGACTCAGGCCCAGAC 1797
L E A S P A S S P L A D S G P D
1801 ----+----*----+----*----+----*----+----*----+----* 1850
A M T P A L E D S L S Q E V Q D S
msh24166 912 GCCATGACTCCTGCCCTAGAGGACTCCCTGTCCCAGGAAGTGCAGGACTC 961
| | || |||||||||| |||||||| ||||||||||| |||||||||||
sj04085 1798 GACTTGGCTCCTGCCCTGGAGGACTCGCTGTCCCAGGAGGTGCAGGACTC 1847
D L A P A L E D S L S Q E V Q D S
1851 ----+----*----+----*----+----*----+----*----+----* 1900
F S F L E D L S S S E P E W V G V
msh24166 962 CTTCTCCTTCCTAGAGGATTTGAGCAGCTCAGAGCCTGAGTGGGTGGGGG 1011
|||||||||||||||||| | ||||||||||| ||||||||||||||||
sj04085 1848 CTTCTCCTTCCTAGAGGACTCAAGCAGCTCAGAACCTGAGTGGGTGGGGG 1897
F S F L E D S S S S E P E W V G A
1901 ----+----*----+----*----+----*----+----*----+----* 1950
E E R E V A K A E A A G
msh24166 1012 TGGAGGAGAGGGAGGTGGCCAAGGCAGAAGCCGCAGGAGCAGCAGGAGCA 1061
||||| ||||||||||| |||||||||| ||||| |
sj04085 1898 CAGAGGATGGGGAGGTGGCCCAGGCAGAAGCAGCAGG............A 1935
E D G E V A Q A E A A G
1951 ----+----*----+----*----+----*----+----*----+----* 2000
A A F S L G E D D P G M G Y L E E
msh24166 1062 GCAGCTTTCTCCCTTGGGGAGGACGACCCTGGGATGGGCTACTTGGAGGA 1111
||||| ||||||| |||||||||||||||||||||||||||| |||||||
sj04085 1936 GCAGCCTTCTCCCCTGGGGAGGACGACCCTGGGATGGGCTACCTGGAGGA 1985
A A F S P G E D D P G M G Y L E E
2001 ----+----*----+----*----+----*----+----*----+----* 2050
L L R V G P Q V E E F S V E P P L
msh24166 1112 GCTGCTGAGAGTTGGGCCTCAGGTAGAAGAGTTCTCTGTGGAGCCACCCC 1161
||| ||| |||||||||||||||| || ||||||||||||||||||||||
sj04085 1986 GCTCCTGGGAGTTGGGCCTCAGGTGGAGGAGTTCTCTGTGGAGCCACCCC 2035
L L G V G P Q V E E F S V E P P L
2051 ----+----*----+----*----+----*----+----*----+----* 2100
D D L S L D D T Q Y V L A P N C
msh24166 1162 TGGATGACCTGTCTCTGGATGATACTCAGTATGTCCTGGCTCCTAACTGC 1211
|||||||||||||||||||||| | |||| |||| |||| || | ||||
sj04085 2036 TGGATGACCTGTCTCTGGATGAGGCACAGTTTGTCTTGGCCCCCAGCTGC 2085
D D L S L D E A Q F V L A P S C
2101 ----+----*----+----*----+----*----+----*----+----* 2150
C S L D S A V S T P D V E E D Y G
msh24166 1212 TGCTCCCTTGATTCTGCTGTTTCCACACCTGACGTAGAAGAGGACTATGG 1261
|| ||| | || || |||| ||| ||||| || || ||||| ||||
sj04085 2086 TGTTCCGTGGACTCCGCTGGCCCCAGGCCTGAAGTTGAGGAGGAAAATGG 2135
C S V D S A G P R P E V E E E N G
2151 ----+----*----+----*----+----*----+----*----+----* 2200
E E V F L S A Y D D L S P L L G P
msh24166 1262 GGAAGAAGTCTTCTTGAGTGCCTATGATGATCTGAGTCCCCTTCTGGGGC 1311
||| ||||| ||| |||||||||||||||| || |||||||||||||| |
sj04085 2136 GGAGGAAGTTTTCCTGAGTGCCTATGATGACCTAAGTCCCCTTCTGGGAC 2185
E E V F L S A Y D D L S P L L G P
2201 ----+----*----+----*----+----*----+----*----+----* 2250
K P I N W E G V G S L E E E A A
msh24166 1312 CTAAACCCATCAACTGGGAAGGTGTAGGCAGTCTGGAGGAAGAGGCAGCA 1361
|||||||| | |||| | ||| ||| |||||||||| ||||||||||
sj04085 2186 CTAAACCCCCAATCTGGAAGGGTTCAGGGAGTCTGGAGGGAGAGGCAGCA 2235
K P P I W K G S G S L E G E A A
2251 ----+----*----+----*----+----*----+----*----+----* 2300
G C G K Q P P T Q D E E E Q A C S
msh24166 1362 GGGTGTGGGAAACAACCTCCAACACAGGATGAAGAAGAACAGGCCTGCTC 1411
|| ||||| | || ||| ||||| || ||||| ||||| ||||
sj04085 2236 GGATGTGGAAGGCAGGCTCTGGGACAGGGTGGGGAAGAGCAGGCATGCTG 2285
G C G R Q A L G Q G G E E Q A C W
2301 ----+----*----+----*----+----*----+----*----+----* 2350
E T R Q E K E A K P R S T S D N R
msh24166 1412 AGAAACCAGGCAGGAAAAGGAGGCTAAGCCCCGGAGCACATCAGATAACC 1461
||| || |||| ||| ||||| |||| | ||| ||| | |
sj04085 2286 GGAAGTTGGGGAGGACAAGCAGGCTGAGCCTGGAGGCAGGCTAGACATCA 2335
E V G E D K Q A E P G G R L D I R
2351 ----+----*----+----*----+----*----+----*----+----* 2400
E E A E A T P E T V M E A G K A
msh24166 1462 GGGAAGAAGCAGAGGCAACTCCAGAGACTGTGATGGAGGCTGGAAAGGCT 1511
||||||| ||||||| || ||||||||| | ||||||||||||||||
sj04085 2336 GGGAAGAGGCAGAGGGAAGTCCAGAGACCAAGGTGGAGGCTGGAAAGGCC 2385
E E A E G S P E T K V E A G K A
2401 ----+----*----+----*----+----*----+----*----+----* 2450
D A E G G E A E R S Q K V M D S F
msh24166 1512 GATGCGGAAGGAGGGGAGGCTGAGAGAAGCCAAAAGGTGATGGATAGTTT 1561
|| ||| |||||||||||| | |||||||| || | | || ||
sj04085 2386 AGTGAGGATAGAGGGGAGGCTGGGGGAAGCCAAGAGACAAAAGTCAGATT 2435
S E D R G E A G G S Q E T K V R L
2451 ----+----*----+----*----+----*----+----*----+----* 2500
K E G S R E E L E A K E E N S E G
msh24166 1562 TAAAGAAGGGAGTAGGGAAGAGCTAGAGGCCAAGGAAGAAAATTCCGAAG 1611
| ||||||||||||||||||| ||||||||||||||| || ||| |||
sj04085 2436 GAGAGAAGGGAGTAGGGAAGAGACAGAGGCCAAGGAAGAGAAGTCCAAAG 2485
R E G S R E E T E A K E E K S K G
2501 ----+----*----+----*----+----*----+----*----+----* 2550
R E V E S I K E T K D V E K I I
msh24166 1612 GTCGAGAGGTTGAAAGTATAAAGGAGACCAAGGATGTGGAAAAAATAATA 1661
||| || | | | |||| | || | |||||| || | |
sj04085 2486 GTCAGAAGAAGGCTGACAGTATGGAGGCTAAAGGTGTGGAGGAACCAGGA 2535
Q K K A D S M E A K G V E E P G
2551 ----+----*----+----*----+----*----+----*----+----* 2600
G E P G K D - E R E I G R E E
msh24166 1662 GGAGAACCGGGTAAAGATG...AGGAGAGAGAGATTGGGAGAGAAGAAGG 1708
||||| | || ||||| |||| | ||| |||| |||||||||
sj04085 2536 GGAGATGAGTATACAGATGAGAAGGAAAAAGAAATTGAGAGAGAAGA... 2582
G D E Y T D E K E K E I E R E E
2601 ----+----*----+----*----+----*----+----*----+----* 2650
A E K G D D T P V D S D M D P E H
msh24166 1709 AGCTGAGAAAGGAGATGACACCCCAGTAGACTCTGATATGGATCCAGAGC 1758
| ||| || |||| || ||| ||||| ||| | ||| | |||||
sj04085 2583 GGATGAACAAAGAGAGGAAGCCCAGGTAGAAGCTGGAAGGGACCTAGAGC 2632
D E Q R E E A Q V E A G R D L E Q
2651 ----+----*----+----*----+----*----+----*----+----* 2700
V F Q E D L V L E E S W E V V H
msh24166 1759 ATGTGTTCCAGGAAGACCTGGTTCTTGAGGAGAGCTGGGAAGTTGTCCAC 1808
| | | ||||||||| | ||| |||||||| ||||||||||| ||
sj04085 2633 AAGGGGCCCAGGAAGATCAAGTTGCTGAGGAGAAATGGGAAGTTGTACAG 2682
G A Q E D Q V A E E K W E V V Q
2701 ----+----*----+----*----+----*----+----*----+----* 2750
K H E A E K G R E G E I K E L R R
msh24166 1809 AAGCATGAGGCTGAGAAAGGCAGAGAGGGTGAGATCAAAGAGCTGAGGAG 1858
|| || ||||||||| || |||||||| |||| ||||| | ||||
sj04085 2683 AAACAAGAGGCTGAGGGAGTCAGAGAGGATGAGGACAAAGGACAGAGGGA 2732
K Q E A E G V R E D E D K G Q R E
2751 ----+----*----+----*----+----*----+----*----+----* 2800
K S D L K S R E D Q G H S E D S G
msh24166 1859 GAAGAGTGACCTTAAGTCAAGAGAAGACCAAGGACACAGTGAAGACAGTG 1908
|||| | ||| | | ||||| ||||||||||| | ||||||||||
sj04085 2733 GAAGGGGTACCATGAAGCAAGAAAAGACCAAGGAGATGGTGAAGACAGCA 2782
K G Y H E A R K D Q G D G E D S R
2801 ----+----*----+----*----+----*----+----*----+----* 2850
S P E E G D D R K E G V F S K E
msh24166 1909 GAAGTCCAGAAGAGGGTGATGATAGGAAGGAAGGGGTTTTCAGCAAGGAA 1958
|||| ||||||| | ||| | | ||||| |||||||||||
sj04085 2783 GAAGCCCAGAAGCAGCAACTGAAGGAGGAGCAGGGGAGGTCAGCAAGGAA 2832
S P E A A T E G G A G E V S K E
2851 ----+----*----+----*----+----*----+----*----+----* 2900
Q K S I D V E T - V M R G V G D
msh24166 1959 CAAAAAAGTATAGATGTAGAAACTGA...AGTCATGAGAGGTGTTGGTGA 2005
| | ||| |||| ||| |||| || | ||| | || || |
sj04085 2833 CGGGAGAGTGGGGATGGAGAGGCTGAGGGAGACCAGAGGGCTGGAGGGTA 2882
R E S G D G E A E G D Q R A G G Y
2901 ----+----*----+----*----+----*----+----*----+----* 2950
H L E E G A L S E G P G V E L L R
msh24166 2006 CCACTTAGAAGAGGGGGCCCTCTCTGAAGGGCCAGGTGTCGAGTTACTGA 2055
| | |||||||||| ||||||||||||| ||||||| | || |||
sj04085 2883 CTATTTAGAAGAGGACACCCTCTCTGAAGGTTCAGGTGTAGCGTCCCTGG 2932
Y L E E D T L S E G S G V A S L E
2951 ----+----*----+----*----+----*----+----*----+----* 3000
V D S T E E I N E Q T S E M K Q
msh24166 2056 GGGTTGACAGTACAGAAGAAATCAATGAACAGACCTCTGAGATGAAACAA 2105
||||||| || | |||| |||| || | ||||||||| || |
sj04085 2933 AGGTTGACTGTGCCAAAGAGGGCAATCCTCACTCTTCTGAGATGGAAGAG 2982
V D C A K E G N P H S S E M E E
3001 ----+----*----+----*----+----*----+----*----+----* 3050
A P L Q P S E P E G M E A E G Q L
msh24166 2106 GCCCCGCTACAGCCATCTGAACCAGAGGGCATGGAGGCTGAGGGACAGCT 2155
| | | ||||||| || | ||||||| |||||| ||||||| ||||
sj04085 2983 GTAGCCCCACAGCCACCTCAGCCAGAGGAGATGGAGCCTGAGGGGCAGCC 3032
V A P Q P P Q P E E M E P E G Q P
3051 ----+----*----+----*----+----*----+----*----+----* 3100
N P E T C L Y S C P C G A G G
msh24166 2156 TAATCCTGAGACATGTGACCTGTATTCTTGTCCCTGTGGGTCAGCTGGTG 2205
| ||| || ||| || | | ||| | ||| ||||
sj04085 3033 CAGTCCAGACGGCTGT...CTATGCCCCTGTTCTCTTGG...CCTGGGTG 3076
S P D G C L C P C S L G L G G
3101 ----+----*----+----*----+----*----+----*----+----* 3150
V G M R L A S T L V Q V R Q V R
msh24166 2206 GTGTGGGCATGCGTCTGGCTTCCACCCTAGTTCAGGTCCGACAGGTCCGC 2255
| |||||||||||||| |||||||| || |||||||||| ||||||||||
sj04085 3077 GCGTGGGCATGCGTCTAGCTTCCACTCTGGTTCAGGTCCAACAGGTCCGC 3126
V G M R L A S T L V Q V Q Q V R
3151 ----+----*----+----*----+----*----+----*----+----* 3200
S V P V V P P K P Q F A K M P S A
msh24166 2256 TCTGTCCCTGTAGTGCCCCCCAAACCACAGTTTGCCAAGATGCCCAGTGC 2305
||||| ||||| ||||||||||| ||||||||||||||||||||||||||
sj04085 3127 TCTGTGCCTGTGGTGCCCCCCAAGCCACAGTTTGCCAAGATGCCCAGTGC 3176
S V P V V P P K P Q F A K M P S A
3201 ----+----*----+----*----+----*----+----*----+----* 3250
M C S K I H V A P A S P C P R P G
msh24166 2306 AATGTGTAGCAAGATCCATGTAGCACCTGCAAGCCCATGTCCAAGGCCTG 2355
||||||||||||||| ||||| |||||||||| ||||| || |||||||
sj04085 3177 AATGTGTAGCAAGATTCATGTGGCACCTGCAAATCCATGCCCGAGGCCTG 3226
M C S K I H V A P A N P C P R P G
3251 ----+----*----+----*----+----*----+----*----+----* 3300
R L D G T P G E K A W - S
msh24166 2356 GTAGGCTTGATGGGACTCCTGGAGAAAAAGCTTGGGG.........TTCT 2396
| |||||||||||||||||||||||| |||||||| ||||
sj04085 3227 GCCGGCTTGATGGGACTCCTGGAGAAAGGGCTTGGGGGTCCCGAGCTTCT 3276
R L D G T P G E R A W G S R A S
3301 ----+----*----+----*----+----*----+----*----+----* 3350
R A S W R N G G S L S F D A A V A
msh24166 2397 CGAGCTTCCTGGAGGAATGGGGGCAGTCTTTCTTTTGATGCTGCTGTGGC 2446
||| | || |||||||||||||| |||||||| |||||||||||||||||
sj04085 3277 CGATCCTCTTGGAGGAATGGGGGTAGTCTTTCCTTTGATGCTGCTGTGGC 3326
R S S W R N G G S L S F D A A V A
3351 ----+----*----+----*----+----*----+----*----+----* 3400
L A R E R Q R T E S Q G V R R T Q
msh24166 2447 CCTGGCCCGGGAACGCCAGAGGACCGAGTCTCAGGGAGTTCGGCGGACCC 2496
||| |||||||| ||||| ||||| ||| |||| ||||||||||| ||||
sj04085 3327 CCTAGCCCGGGACCGCCAAAGGACTGAGGCTCAAGGAGTTCGGCGAACCC 3376
L A R D R Q R T E A Q G V R R T Q
3401 ----+----*----+----*----+----*----+----*----+----* 3450
T C T G G G D Y S L N S R T P P
msh24166 2497 AGACCTGTACTGGAGGTGGGGATTATAGTCTCAACTCCAGAACCCCTCCT 2546
|||||||||||| ||||||||||| | |||| | |||||||||| |||
sj04085 3377 AGACCTGTACTGAGGGTGGGGATTACTGCCTCATCCCCAGAACCCCCCCT 3426
T C T E G G D Y C L I P R T P P
3451 ----+----*----+----*----+----*----+----*----+----* 3500
C S M I L A H S S R P L S C L E R
msh24166 2547 TGTAGCATGATCCTTGCCCATTCTTCCCGGCCCCTTAGCTGTTTGGAACG 2596
|||||||||||| |||||||||| | |||||||||||||| |||| |
sj04085 3427 TGTAGCATGATCTCTGCCCATTCTCCTCGGCCCCTTAGCTGCCTGGAGCT 3476
C S M I S A H S P R P L S C L E L
3501 ----+----*----+----*----+----*----+----*----+----* 3550
P P E G T E G S E P R S R L S L P
msh24166 2597 CCCACCTGAAGGCACAGAGGGGTCTGAGCCCAGGAGTCGGCTTAGTCTGC 2646
|||| ||||||| |||| ||||||| || ||||||| ||||||||||
sj04085 3477 CCCATCTGAAGGTGCAGAAGGGTCTGGATCCCGGAGTCGTCTTAGTCTGC 3526
P S E G A E G S G S R S R L S L P
3551 ----+----*----+----*----+----*----+----*----+----* 3600
P R E L H P V V P L V A P Q R Q
msh24166 2647 CCCCTAGAGAGCTTCACCCTGTTGTCCCTCTTGTGGCCCCTCAGCGCCAG 2696
|||| ||||| | || | || ||| || || || |||||||| |
sj04085 3527 CCCCCAGAGAACCCCAGGTTCCTGACCCCCTGTTGTCCTCTCAGCGCAGG 3576
P R E P Q V P D P L L S S Q R R
3601 ----+----*----+----*----+----*----+----*----+----* 3650
T Y A F E T Q T N H G K D E G V *
msh24166 2697 ACATATGCTTTTGAAACACAGACTAATCATGGGAAAGATGAAGGGGTATG 2746
||||||| |||||||||||| |||| | |||||||| |||||| | ||
sj04085 3577 TCATATGCATTTGAAACACAGGCTAACCCTGGGAAAGGTGAAGGACTGTG 3626
S Y A F E T Q A N P G K G E G L *
3651 ----+----*----+----*----+----*----+----*----+----* 3700
msh24166 2747 ATTAGGA........CAGGACAAGAGGAACCAAGAAATCATCACCAATCT 2788
||||||| | || ||| || |||| || | || |||||
sj04085 3627 ATTAGGACCACAGCCCTGGGCAAAGGGGACCAGCAAGTTGTCTTGAATCT 3676
3701 ----+----*----+----*----+----*----+----*----+----* 3750
msh24166 2789 CTGGAGCACTTGCCTAGCTGT...CTTTGCTGCCTCGGCAGCTGAGATGT 2835
| | | | || |||||||| || ||| || | ||||||| ||
sj04085 3677 CCAGGGTTCCTGACTAGCTGTCTCCTCTGCAGCATGAGCAGCTGTAGTGC 3726
3751 ----+----*----+----*----+----*----+----*----+----* 3800
msh24166 2836 CTAATTCCATAGGCTTGGGTCCTCCAGCTTCTTGTTTTGACCATGAGAGG 2885
| || || |||||||| || |||||||||||| |||||| || ||||
sj04085 3727 CCAACTCTATAGGCTTTGGCCCTCCAGCTTCTCTCTTTGACTGTGGGAGG 3776
3801 ----+----*----+----*----+----*----+----*----+----* 3850
msh24166 2886 TACAGACTTGGTGGATTTACTTATGTTTGTGTTAGACACAAAGCCACTTA 2935
|| | |||||| | ||||| | |||| | ||||||||| ||||||
sj04085 3777 CACTGCCTTGGTTGGTTTACCTGAACTTGTCTCCGACACAAAG.CACTTA 3825
3851 ----+----*----+----*----+----*----+----*----+----* 3900
msh24166 2936 TGTCTTAGCAGAGTCTTAAGAAACATAGAACGATCTTGTTTCCAGGGAGT 2985
| |||||| ||| || |||||| | | ||||||||| |||||||||
sj04085 3826 TCTCTTAGGAGATTCCCAAGAAAGTCAACAAGATCTTGTTCCCAGGGAGT 3875
3901 ----+----*----+----*----+----*----+----*----+----* 3950
msh24166 2986 ...........TAACAAAAACATAGGGTAGGTAAAAGCTTTTTTTTTTTT 3024
|| |||||| |||||| | || || ||
sj04085 3876 GGGTCATTGGCCAAAGGGAACATAAGGTAGGCAGAAAACTTAAAAGAGTT 3925
3951 ----+----*----+----*----+----*----+----*----+----* 4000
msh24166 3025 TCTTAAATTTAAATACAGTGGGGGAATTTCAGCCAAACTTTTGCCCTATT 3074
| ||||| | | | | ||| | |||| | | || | |
sj04085 3926 TGTTAAAGTGA...AGACTGGAGAAATTCC...........TCCCTTCCT 3961
4001 ----+----*----+----*----+----*----+----*----+----* 4050
msh24166 3075 CTGAGCTGTGAATATCTCTTCACAGAAGCCTACTGTAGATGTGGGAGATA 3124
||||||||||||| |||||||| ||||| | ||||| || |
sj04085 3962 CTGAGCTGTGAATCTCTCTTCATGAAAGCCAAAGGTAGAGACAGGGAGGA 4011
4051 ----+----*----+----*----+----*----+----*----+----* 4100
msh24166 3125 TAGGACCAG.........................ATATAGAATAGCTCAC 3149
||| |||| | |||| | || ||
sj04085 4012 CAGGGCCAGGTTAGGGCCTTCCACACACAAACACTTCTAGAGTTGCCCAT 4061
4101 ----+----*----+----*----+----*----+----*----+----* 4150
msh24166 3150 CCCTGATTTGTTCCTAGATTTTTGGCTGTCTTCTGACCCTCTTTAGTTTC 3199
|||| | ||||| | || | | | || ||| |||| |||| | |
sj04085 4062 TCCTGTTATGTTCTTGGACCCTAAGATACCTCCTGTCCCT.TTTAAATCC 4110
4151 ----+----*----+----*----+----*----+----*----+----* 4200
msh24166 3200 AGAGTAGGAGAAACATCCAAGA..AGCTCTTTAAAGTCCTCAGTGTTTGC 3247
||| || ||||||| |||| || |||||||| ||| ||||| | ||||
sj04085 4111 AGATTAAGAGAAACGTCCAGGAAGAGCTCTTTGAAGCCCTCAATATTTGT 4160
4201 ----+----*----+----*----+----*----+----*----+----* 4250
msh24166 3248 TGAAGGAAATGGGTGGCATCCTCTACCTTCAATTATTTTGCAGAAGAGGT 3297
|| ||| | ||| | ||| | || | | |||
sj04085 4161 TGGAGGGACTGGACTCC..TCTCCAGCTCCCCACCCTCTGC......... 4199
4251 ----+----*----+----*----+----*----+----*----+----* 4300
msh24166 3298 CCTCCCATTTTAGGAAAAGGGAATGTTGGGCTGAAGAGATAGCTCAGAGG 3347
| | | | | | | | | ||| | |||| ||| | |
sj04085 4200 ...CTCCAGTCACCATGTGCAAGAGAGGTCCTGTACAGATCTCTCTGGG. 4245
4301 ----+----*----+----*----+----*----+----*----+----* 4350
msh24166 3348 TTAAGAGCACCTACTGTTCTTCCAGAGGTCCTGAGTTCAATTCCTAGCAA 3397
|| | ||| | | | | | ||
sj04085 4246 .............CTCTCCTTTC.................TCCTTTGGAA 4265
4351 ----+----*----+----*----+----*----+----*----+----* 4400
msh24166 3398 TCACATGATGGCTCACAACCATCTGTAACGGAATTTGATGCCTTCTACGG 3447
| || || |
sj04085 4266 TAACTTGTT........................................C 4275
4401 ----+----*----+----*----+----*----+----*----+----* 4450
msh24166 3448 GTGAGTCTGAAGAGAGCAATGGTGTACTCATTCATATACATAAAATAAAG 3497
| || | | || | |||||||
sj04085 4276 CTATTTCAGGAAAGGGAAATGGTG.......................... 4299
4451 ----+----*----+----*----+----*----+----*----+----* 4500
msh24166 3498 AAAGAAAGAAAAGAAAAAGGAAAAGAAAAGTAGAGGGAATGTCACTCAAT 3547
||| |
sj04085 4300 .............................................TCACT 4304
4501 ----+----*----+----*----+----*----+----*----+----* 4550
msh24166 3548 TTGGCTCTAGCACTGTCTCTGCA..CAGGCTGGGGCTACAGGCCACCATT 3595
||| || | |||| ||| || ||||||||||| ||||| | | |
sj04085 4305 CAGGCCCTGGGACTGCTTCTCCAGCCAGGCTGGGGCCACAGGTCCCACTC 4354
4551 ----+----*----+----*----+----*----+----*----+----* 4600
msh24166 3596 TAGCAATGGTGGGTATTTGATAATAAAAGCTGAATTTTTTTTTTAACATT 3645
||| | ||| | | | | ||||||||||| ||||||
sj04085 4355 TAGTGAAGGTCAATGTCTCAGAATAAAAGCTGTATTTTT........... 4393
4601 - 4601
msh24166 3646 T 3646
sj04085 4394 . 4394