Comparison of KIAA cDNA sequences between mouse and human (KIAA2037)
<<Original sequence data>>
mouse mKIAA2037 (msh10203) length: 4451 bp, CDS: 35 - 2416
human KIAA2037 (pj01545) length: 4506 bp, CDS: 469 - 1953
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 106 - 931 280 196 41.2
CDS: 932 - 2420 1342 144 9.7
3'UTR: 2421 - 4859 1588 428 21.2
amino acid
CDS: 932 - 2420 476 19 3.8
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
msh10203 1 CGGCGGTGGAATGGCGCTGGGCGCGTGATTTTGAACAAACCCGGGTCTGT 50
pj01545 1 .................................................. 1
51 ----+----*----+----*----+----*----+----*----+----* 100
msh10203 51 GTTTCGGAGGCGCCGCCGCCGCCGCGGCTGCTGGGAGCCCGGGGAGCGCG 100
pj01545 1 .................................................. 1
101 ----+----*----+----*----+----*----+----*----+----* 150
msh10203 101 GCGCGAGAAGGAGGCGGCGGCGCCGCCGGCTCGGCACCTGGGCATCTCTC 150
| || |||||||||| || |||| ||| | || ||
pj01545 1 .....TGGTGGTGGCGGCGGCGGCGGCGGCCCGGGCTCCGGCTGTCGGGG 45
151 ----+----*----+----*----+----*----+----*----+----* 200
msh10203 151 TAGAAGCGGTGCGATCATGGAGGTGGTGCCGGCCGAGGTGAATA....GT 196
|| || | || | |||| | | | ||||||||| | |
pj01545 46 AAGCTGCTGAGCTGTGATGGTGAT.......GACGAGGTGAAAATGGCGG 88
201 ----+----*----+----*----+----*----+----*----+----* 250
msh10203 197 TTGCTTCCAGACGACATAATGGACACTGCTATAACGTTAGTGGATGAGGA 246
| ||| | | || || | ||| ||| | | || | |
pj01545 89 ATCTTTCGAAATACAATCCCGGCCCCTGACATACCAGAGGCGGCGGCG.. 136
251 ----+----*----+----*----+----*----+----*----+----* 300
msh10203 247 TAGTATTGAGGCTGTAATTGTGTCATCCCCAATTCCCATGGAGACAGAGC 296
pj01545 137 .................................................. 137
301 ----+----*----+----*----+----*----+----*----+----* 350
msh10203 297 TGGAAGAAATTGTCAACATAAATTCTACCGGTGACTCTACAGCCACGCCC 346
||| ||| | || || |
pj01545 137 ...........................ACGGCGACGTCGCCACCCCGGCT 159
351 ----+----*----+----*----+----*----+----*----+----* 400
msh10203 347 ATTTCCACGGAACCAATCACAGTGTACAGTAACCACACTAACCAAGTTGC 396
| | ||| | || || |
pj01545 160 CCCTTCTCGGTCC............................CCGGGTACC 181
401 ----+----*----+----*----+----*----+----*----+----* 450
msh10203 397 AGTGAATACCACAGTTTCTAAAGCAGATTCTAATACCACAGTGAAACCAG 446
|| | |||||| |
pj01545 182 CTGGAGCGCTCCAGTTTGGA.............................. 201
451 ----+----*----+----*----+----*----+----*----+----* 500
msh10203 447 CATTTCCAAGTGGCCTTCAAAAACTTGGTGCTCAGACTCCTGTGACTATA 496
pj01545 202 .................................................. 202
501 ----+----*----+----*----+----*----+----*----+----* 550
msh10203 497 TCAGCCAATCAGATTATTTTAAACAAAGTATCACAGACATCTGATCTTAA 546
||
pj01545 202 ...............................................CAA 204
551 ----+----*----+----*----+----*----+----*----+----* 600
msh10203 547 ACTTGGCAATCAGACCCTTAAACCAGATGGACAGAAGTTAATATTAACAA 596
||| || || || | | ||| |||| || |
pj01545 205 ACTGGGAAA.........GGAAGCTGCTGGCCAGA.......GCTATCGT 238
601 ----+----*----+----*----+----*----+----*----+----* 650
msh10203 597 CTTTGGGCAAGTCTGGTTCACCAATTGTTTTAGCACTACCCCATAGCCAA 646
|||||| ||
pj01545 239 GCACGGGCAA......................................AA 250
651 ----+----*----+----*----+----*----+----*----+----* 700
msh10203 647 CTACCCCAGGCTCAGAAAGTTACAGCTCAGGCCCAGCCAGGAGATGCTAA 696
| | ||| | | | | | || |||| || | |||| |||
pj01545 251 CAAGCCCCGCCGGGGCTCGGGATTGCCCAGGACC.TTCTGGAGCCCCTAC 299
701 ----+----*----+----*----+----*----+----*----+----* 750
msh10203 697 GTTACCACCGCAGCAAATTAAAGTAGTTACCATTGGAGGGAGGCCAGAGG 746
| || |||||||| | ||
pj01545 300 CTCGGAGCC.........................CGAGGGAGGAGAAAGC 324
751 ----+----*----+----*----+----*----+----*----+----* 800
msh10203 747 TGAAACCTGTCATTGGTGTCTCAGCACTGACCCCAGGAAGCCAACTGATT 796
| | || | ||| || | ||
pj01545 325 GGCAGCC..GCTGGAGTGCCTGATCA........................ 348
801 ----+----*----+----*----+----*----+----*----+----* 850
msh10203 797 AATACTACAACTCAGCCCTCTGTGTTACAGACCCAACAGTTAAAAACAGT 846
| | | | | || | || | |||
pj01545 349 ...........ACTTTCTAGCGGGAGAACGATCATGGAGGTGGTGCCAGC 387
851 ----+----*----+----*----+----*----+----*----+----* 900
msh10203 847 ACAGATTGCTAAGAAGCCTCGGACACCAACCTCGGGTCCAGTGATCACGA 896
||||||||||||||||||| || |||||||| |||||||| |||||||
pj01545 388 TGAGATTGCTAAGAAGCCTCGAACGCCAACCTCTGGTCCAGTAATCACGA 437
901 ----+----*----+----*----+----*----+----*----+----* 950
S S Y R T D N
msh10203 897 AGCTGATTTTTGCAAAACCAATTAATAGCAAAGCAGTTACAGGACAGACA 946
||||||| |||||||||||||||||||| |||||||||||||||||||||
pj01545 438 AGCTGATCTTTGCAAAACCAATTAATAGTAAAGCAGTTACAGGACAGACA 487
S S Y R T D N
951 ----+----*----+----*----+----*----+----*----+----* 1000
S S I S T R R G R V L S Q S T
msh10203 947 ACTCAAGCATCTCCACCCGTCGTCACAGGTAGGGTTCTTTCACAGTCTAC 996
||||||| || ||||| ||| | | ||||||||||||||||||||
pj01545 488 ACTCAAGTTTCACCACCAGTCAT....TGCAGGGTTCTTTCACAGTCTAC 533
S S F T T S H C R V L S Q S T
1001 ----+----*----+----*----+----*----+----*----+----* 1050
P G T P S K T I T I S E S G V I G
msh10203 997 TCCTGGAACTCCATCAAAGACTATAACAATATCAGAAAGTGGTGTGATTG 1046
||| ||||||||||||||||| ||||||||||| ||||||||||| ||||
pj01545 534 TCCCGGAACTCCATCAAAGACCATAACAATATCTGAAAGTGGTGTTATTG 583
P G T P S K T I T I S E S G V I G
1051 ----+----*----+----*----+----*----+----*----+----* 1100
S T L N S T T Q T P N K I A I S
msh10203 1047 GATCAACTTTAAATTCGACAACACAGACACCAAATAAGATAGCCATCTCA 1096
|||||||||||||||| |||||||||||||||||||| ||||||||||||
pj01545 584 GATCAACTTTAAATTCTACAACACAGACACCAAATAAAATAGCCATCTCA 633
S T L N S T T Q T P N K I A I S
1101 ----+----*----+----*----+----*----+----*----+----* 1150
P L K S P N K T V K S A V Q T I T
msh10203 1097 CCTTTGAAGTCGCCAAATAAGACAGTGAAATCGGCTGTGCAGACCATCAC 1146
|||||||| |||||||||||| |||||||||| ||||||||||||||||
pj01545 634 CCTTTGAAATCGCCAAATAAGGCAGTGAAATCAACTGTGCAGACCATCAC 683
P L K S P N K A V K S T V Q T I T
1151 ----+----*----+----*----+----*----+----*----+----* 1200
V G G M S T S Q F K T I I P L A T
msh10203 1147 TGTGGGAGGAATGAGCACCTCACAGTTTAAGACCATCATCCCTCTGGCCA 1196
||| |||||| ||||||| |||||||||||||| || || |||||||| |
pj01545 684 TGTTGGAGGAGTGAGCACATCACAGTTTAAGACAATTATTCCTCTGGCAA 733
V G G V S T S Q F K T I I P L A T
1201 ----+----*----+----*----+----*----+----*----+----* 1250
A P N V Q Q I Q V P G S K F H Y
msh10203 1197 CTGCTCCCAATGTCCAGCAGATTCAAGTGCCTGGAAGCAAGTTTCATTAT 1246
||||||||||||||||||||||||||||||||||||||||||||||||||
pj01545 734 CTGCTCCCAATGTCCAGCAGATTCAAGTGCCTGGAAGCAAGTTTCATTAT 783
A P N V Q Q I Q V P G S K F H Y
1251 ----+----*----+----*----+----*----+----*----+----* 1300
V R L V T A T T A S S S A Q P V S
msh10203 1247 GTCCGACTTGTTACTGCCACAACAGCCAGTAGCTCAGCCCAGCCAGTCAG 1296
||||||||||||||||||||| |||||||||||||| |||||||||| ||
pj01545 784 GTCCGACTTGTTACTGCCACATCAGCCAGTAGCTCAACCCAGCCAGTTAG 833
V R L V T A T S A S S S T Q P V S
1301 ----+----*----+----*----+----*----+----*----+----* 1350
Q S P S V N T Q P L Q Q A K P V V
msh10203 1297 TCAGAGCCCCAGTGTAAACACACAGCCTCTCCAGCAAGCAAAACCAGTGG 1346
||||| |||||| |||||| |||||||| ||||||||||| |||||||
pj01545 834 TCAGAATCCCAGTACAAACACTCAGCCTCTTCAGCAAGCAAAGCCAGTGG 883
Q N P S T N T Q P L Q Q A K P V V
1351 ----+----*----+----*----+----*----+----*----+----* 1400
V N T T P V R M S V P F V Q A Q
msh10203 1347 TTGTTAATACCACCCCTGTACGGATGTCAGTTCCATTTGTCCAAGCTCAG 1396
|||||||||| ||||| || ||||||||||||||| ||||| |||||||
pj01545 884 TTGTTAATACAACCCCAGTGCGGATGTCAGTTCCAATTGTCTCAGCTCAG 933
V N T T P V R M S V P I V S A Q
1401 ----+----*----+----*----+----*----+----*----+----* 1450
A V K Q V V P K P I N S T S Q I V
msh10203 1397 GCCGTTAAGCAAGTTGTTCCAAAACCAATCAATTCAACTTCACAAATTGT 1446
|| || || |||||||||||||||||||||||| ||||||||||||| ||
pj01545 934 GCTGTCAAACAAGTTGTTCCAAAACCAATCAATCCAACTTCACAAATAGT 983
A V K Q V V P K P I N P T S Q I V
1451 ----+----*----+----*----+----*----+----*----+----* 1500
T T S Q P Q Q R L I M P A T P L P
msh10203 1447 AACTACCAGCCAGCCACAGCAGCGGCTCATCATGCCTGCCACACCACTGC 1496
|||||| |||||||||||||| ||||| ||||||||||||||||||||||
pj01545 984 AACTACTAGCCAGCCACAGCAACGGCTTATCATGCCTGCCACACCACTGC 1033
T T S Q P Q Q R L I M P A T P L P
1501 ----+----*----+----*----+----*----+----*----+----* 1550
Q I Q P N L T N L P P G T V L A
msh10203 1497 CTCAGATCCAGCCCAACCTCACTAACCTGCCACCAGGTACTGTGCTGGCA 1546
| ||||||||||||||||||||||||||||||||||| ||||| ||||||
pj01545 1034 CACAGATCCAGCCCAACCTCACTAACCTGCCACCAGGCACTGTCCTGGCA 1083
Q I Q P N L T N L P P G T V L A
1551 ----+----*----+----*----+----*----+----*----+----* 1600
P A P G T G N V G Y A V L P A Q Y
msh10203 1547 CCAGCTCCAGGAACAGGGAATGTGGGCTATGCAGTGCTTCCAGCTCAGTA 1596
|||||||| ||||||||||||||||| |||||||||||||||||||||||
pj01545 1084 CCAGCTCCGGGAACAGGGAATGTGGGTTATGCAGTGCTTCCAGCTCAGTA 1133
P A P G T G N V G Y A V L P A Q Y
1601 ----+----*----+----*----+----*----+----*----+----* 1650
V T Q L Q Q S S Y V S I A S N S N
msh10203 1597 TGTTACTCAGTTACAGCAGTCTTCATATGTGTCTATAGCAAGCAACTCTA 1646
|||||||||| ||||||||||||||||||| || ||||||||||||||||
pj01545 1134 TGTTACTCAGCTACAGCAGTCTTCATATGTATCAATAGCAAGCAACTCTA 1183
V T Q L Q Q S S Y V S I A S N S T
1651 ----+----*----+----*----+----*----+----*----+----* 1700
F T G T S G I Q T Q A R L P F N
msh10203 1647 ATTTTACTGGAACATCTGGCATCCAGACACAGGCAAGGCTTCCATTCAAT 1696
||||||||||||||||| |||||||| |||||| ||||||||||||||
pj01545 1184 CCTTTACTGGAACATCTGGTATCCAGACCCAGGCACGGCTTCCATTCAAT 1233
F T G T S G I Q T Q A R L P F N
1701 ----+----*----+----*----+----*----+----*----+----* 1750
G I I P S E S T S R P R K P C N C
msh10203 1697 GGCATAATTCCATCAGAGTCTACCAGTCGGCCCAGAAAACCCTGTAACTG 1746
|||||||| ||||||||||| ||||||||||| |||| |||||||| ||
pj01545 1234 GGCATAATCCCATCAGAGTCGGCCAGTCGGCCCCGAAAGCCCTGTAATTG 1283
G I I P S E S A S R P R K P C N C
1751 ----+----*----+----*----+----*----+----*----+----* 1800
T K S L C L K L Y C D C F A N G E
msh10203 1747 TACAAAATCACTGTGTTTGAAATTATACTGTGATTGCTTTGCAAATGGTG 1796
|||||||||||||||||||||||| || ||||||||||||||||||||||
pj01545 1284 TACAAAATCACTGTGTTTGAAATTGTATTGTGATTGCTTTGCAAATGGTG 1333
T K S L C L K L Y C D C F A N G E
1801 ----+----*----+----*----+----*----+----*----+----* 1850
F C N N C N C T N C Y N N L E H
msh10203 1797 AATTCTGCAACAACTGCAACTGTACCAATTGTTACAACAATTTAGAGCAC 1846
|||| |||||||||||||| ||||| ||||||||||||||||| || ||
pj01545 1334 AATTTTGCAACAACTGCAATTGTACTAATTGTTACAACAATTTGGAACAT 1383
F C N N C N C T N C Y N N L E H
1851 ----+----*----+----*----+----*----+----*----+----* 1900
E N E R Q K A I K A C L D R N P E
msh10203 1847 GAGAATGAGAGACAAAAGGCAATCAAGGCATGCCTTGATAGAAATCCGGA 1896
|| ||||| || ||||| ||||| |||||||||||||| |||||||| ||
pj01545 1384 GAAAATGAAAGGCAAAAAGCAATAAAGGCATGCCTTGACAGAAATCCAGA 1433
E N E R Q K A I K A C L D R N P E
1901 ----+----*----+----*----+----*----+----*----+----* 1950
A F K P K I G K G K E G E S D R R
msh10203 1897 AGCCTTCAAGCCAAAGATAGGAAAAGGAAAAGAGGGGGAGTCGGATCGGC 1946
|||||| ||||| |||||||| |||||||| ||||| || || ||||| |
pj01545 1434 AGCCTTTAAGCCTAAGATAGGGAAAGGAAAGGAGGGAGAATCTGATCGAC 1483
A F K P K I G K G K E G E S D R R
1951 ----+----*----+----*----+----*----+----*----+----* 2000
H S K G C N C K R S G C L K N Y
msh10203 1947 GGCACAGCAAAGGCTGCAACTGCAAACGCTCGGGGTGTCTTAAAAACTAC 1996
| || |||||||| || || |||||||| || || |||||||||||||||
pj01545 1484 GTCATAGCAAAGGGTGTAATTGCAAACGATCAGGATGTCTTAAAAACTAC 1533
H S K G C N C K R S G C L K N Y
2001 ----+----*----+----*----+----*----+----*----+----* 2050
C E C Y E A K I M C S S I C K C I
msh10203 1997 TGCGAGTGCTATGAGGCAAAAATAATGTGTTCTTCTATATGCAAATGCAT 2046
|| || |||||||||||||||||||||||||| || ||||||||||| ||
pj01545 1534 TGTGAATGCTATGAGGCAAAAATAATGTGTTCCTCAATATGCAAATGTAT 1583
C E C Y E A K I M C S S I C K C I
2051 ----+----*----+----*----+----*----+----*----+----* 2100
G C K N F E E S P E R K T L M H L
msh10203 2047 CGGCTGTAAGAATTTTGAAGAAAGCCCAGAACGGAAGACATTGATGCACT 2096
|||||||||||||||||||||||||| ||| |||||||||||||||| |
pj01545 1584 TGGCTGTAAGAATTTTGAAGAAAGCCCGGAAAGGAAGACATTGATGCATT 1633
G C K N F E E S P E R K T L M H L
2101 ----+----*----+----*----+----*----+----*----+----* 2150
A D A A E V R V Q Q Q T A A K T
msh10203 2097 TAGCAGATGCGGCTGAAGTAAGGGTCCAGCAGCAGACAGCAGCGAAGACC 2146
| |||||||| |||||||||||||| ||||| || |||||||| |||||
pj01545 1634 TGGCAGATGCAGCTGAAGTAAGGGTACAGCAACAAACAGCAGCCAAGACG 1683
A D A A E V R V Q Q Q T A A K T
2151 ----+----*----+----*----+----*----+----*----+----* 2200
K L S S Q I S D L L T R P T P A L
msh10203 2147 AAGCTGTCCTCTCAGATCTCAGACCTCCTTACAAGGCCAACCCCAGCTCT 2196
||| | |||||||| || |||||| | ||||| |||||||| |||||| |
pj01545 1684 AAGTTATCCTCTCAAATTTCAGACTTGCTTACTAGGCCAACACCAGCTTT 1733
K L S S Q I S D L L T R P T P A L
2201 ----+----*----+----*----+----*----+----*----+----* 2250
N S A G G K L P F T F V T K E V A
msh10203 2197 CAACAGTGCAGGAGGGAAATTGCCGTTTACATTTGTAACTAAAGAAGTAG 2246
|| |||| ||| || |||||||| ||||||||||||||||| |||||||
pj01545 1734 AAATAGTGGAGGCGGAAAATTGCCATTTACATTTGTAACTAAGGAAGTAG 1783
N S G G G K L P F T F V T K E V A
2251 ----+----*----+----*----+----*----+----*----+----* 2300
E A T C N C L L A Q A E Q A D K
msh10203 2247 CTGAAGCCACGTGTAATTGCCTTCTTGCCCAGGCAGAGCAGGCAGACAAG 2296
|||||||||| ||||||||||| |||||||||||||||||||||||||||
pj01545 1784 CTGAAGCCACATGTAATTGCCTCCTTGCCCAGGCAGAGCAGGCAGACAAG 1833
E A T C N C L L A Q A E Q A D K
2301 ----+----*----+----*----+----*----+----*----+----* 2350
K G K S K A A A E R M I L E E F G
msh10203 2297 AAGGGGAAATCAAAGGCGGCAGCAGAGCGGATGATACTTGAGGAATTTGG 2346
||||| ||||||||||| ||||| || |||||||||||||||||||| ||
pj01545 1834 AAGGGAAAATCAAAGGCAGCAGCGGAACGGATGATACTTGAGGAATTCGG 1883
K G K S K A A A E R M I L E E F G
2351 ----+----*----+----*----+----*----+----*----+----* 2400
R C L M S V I N S A G K A K S D P
msh10203 2347 ACGATGTTTGATGAGCGTCATCAACTCTGCAGGAAAAGCCAAAAGTGACC 2396
||||||||||||||| |||||||||||||||||||| || ||||||||||
pj01545 1884 ACGATGTTTGATGAGTGTCATCAACTCTGCAGGAAAGGCAAAAAGTGACC 1933
R C L M S V I N S A G K A K S D P
2401 ----+----*----+----*----+----*----+----*----+----* 2450
C A M H C *
msh10203 2397 CCTGTGCCATGCACTGCTAACTCTTGCACAAAAGACTG...AATGGAACT 2443
| ||||||||| | |||||||||||||||||||||||| |||||||||
pj01545 1934 CTTGTGCCATGAATTGCTAACTCTTGCACAAAAGACTGATAAATGGAACT 1983
C A M N C *
2451 ----+----*----+----*----+----*----+----*----+----* 2500
msh10203 2444 GTACAGAAAATTTAAGGTGCCGGGACACTTGATTTTCTAGAAGATAGCTT 2493
|||||||||||||||||||| ||||||||||||||||| ||||| |
pj01545 1984 GTACAGAAAATTTAAGGTGCAGGGACACTTGATTTTCTGGAAGAAA.... 2029
2501 ----+----*----+----*----+----*----+----*----+----* 2550
msh10203 2494 AACAATTACTGTATTTTAATTCAGCCTTTGTTTTAAGAGATCTGAAACTA 2543
|||||||||||||||||||||||| | ||||||||| ||| |||||| ||
pj01545 2030 AACAATTACTGTATTTTAATTCAGTCCTTGTTTTAAAAGACCTGAAATTA 2079
2551 ----+----*----+----*----+----*----+----*----+----* 2600
msh10203 2544 TAATATTGAAAGAGAA...............GAAATTAGTACATTTAAAA 2578
||||| |||| ||||| ||||||||||||||| |||
pj01545 2080 TAATACTGAAGGAGAAGAAATTTTAAATGAGGAAATTAGTACATTTTAAA 2129
2601 ----+----*----+----*----+----*----+----*----+----* 2650
msh10203 2579 TCTTAGTTAATTCTGCCTATGCCCCTTCTAAATTTTTTTCTTTAAAAATT 2628
|||||||||| ||||| ||||||||||||||||| ||||
pj01545 2130 TCTTAGTTAAATCTGCTTATGCCCCTTCTAAATT...........GAATT 2168
2651 ----+----*----+----*----+----*----+----*----+----* 2700
msh10203 2629 TTTCTTTTATGTATTATATA.TTTTTTTAATTTGCTTGGGTTTCTTAAGA 2677
|||||| ||||||||| ||||||||||||||||||||||||||||
pj01545 2169 TTTCTT.....TATTATATAGATTTTTTAATTTGCTTGGGTTTCTTAAGA 2213
2701 ----+----*----+----*----+----*----+----*----+----* 2750
msh10203 2678 ATTAGATGTTCT.GTCCTGATTCTATTGACAAAGAACATTCATAAATTAT 2726
|||||||||||| | ||||| | |||||||| || || ||||||
pj01545 2214 ATTAGATGTTCTCTTTCTGATACCTTTGACAAAAAATGTTTATAAAT... 2260
2751 ----+----*----+----*----+----*----+----*----+----* 2800
msh10203 2727 AGTGATATCATTTATAATGTATGGTGTTGTATGACTTTGTTCAGTAGAAA 2776
| |||| |||||||||||||||||||||||||||||||| | ||||||
pj01545 2261 ..TCATATAATTTATAATGTATGGTGTTGTATGACTTTGTT.AATAGAAA 2307
2801 ----+----*----+----*----+----*----+----*----+----* 2850
msh10203 2777 AGGCCAAAGTAGCATGGGTATTACCCATTCTTTGGTTACAGATCCAGAGT 2826
|| | || ||| || ||||||||||||| |||| ||| |
pj01545 2308 AGCCAAAGCAGCAGTGGTTAGCACCCATTCTTTGGGACTTGATCTAGAAT 2357
2851 ----+----*----+----*----+----*----+----*----+----* 2900
msh10203 2827 ATTCACAGGTAGAATGTCCGCATAACCAGATTCTAAATGAAATATATTTA 2876
|| ||| ||||||| ||||| || ||||| |||||| | ||| |
pj01545 2358 ATCTGCAGACAGAATGT.TACATAAACAAATTCT.TATGAAACACATTCA 2405
2901 ----+----*----+----*----+----*----+----*----+----* 2950
msh10203 2877 GGAGACATTTTGTTTAGAGAAACACCATCCTTAAAAAAAAAAAATCAGAT 2926
|||||||||| | ||||| | | ||| ||||| |||
pj01545 2406 AATGACATTTTGTATTTAGAAAAGGACTATCTTTTAAAGAAAAAGCAGCC 2455
2951 ----+----*----+----*----+----*----+----*----+----* 3000
msh10203 2927 TTTTAGAGTGGATTCTGGAATGCTGT.CTGCTGTCTCGTTGGGAGTATCA 2975
|||||| | ||||||||||| | | ||| |||| | |||||| | |||
pj01545 2456 TTTTAGGGCCGATTCTGGAATAATATCCTGTTGTCACTTTGGGAATGTCA 2505
3001 ----+----*----+----*----+----*----+----*----+----* 3050
msh10203 2976 GAAGGGGAAACAATCCCCACCACACTTTTCAGTATAATACAAACATTATG 3025
||||||||||||||||||| | | | || ||| || |
pj01545 2506 GAAGGGGAAACAATCCCCA...........GGCACACTAAAAATTTTTTA 2544
3051 ----+----*----+----*----+----*----+----*----+----* 3100
msh10203 3026 CTTTCTTTAAAGAAAGC....AAAATATTAAGGGGCAGTAATTTTCAGAG 3071
| || || ||| | |||||||||| || |||||| | ||||||
pj01545 2545 AAGTTATTTAAAAAAACATATAAAATATTAAAGGACAGTAAATCTCAGAG 2594
3101 ----+----*----+----*----+----*----+----*----+----* 3150
msh10203 3072 GACAGGC....TGTGTCTCTGATGAGGAATGGCTAAC..ATGGTCTGGGG 3115
|| ||| ||| ||| | || ||||| ||||||| ||| ||||||
pj01545 2595 GATGGGCAATGTGTTTCTATAATAAGGAAAGGCTAACAGATGCTCTGGGC 2644
3151 ----+----*----+----*----+----*----+----*----+----* 3200
msh10203 3116 CGTCTTCATTTTCTCTGAAGGAGGTGGTATGTTTTATAA.....TAATTG 3160
|||| |||||||| | || |||||||||||| || || |||||
pj01545 2645 TGTCTCCATTTTCTTTCAAAGAGGTGGTATGTATTTGAAGTAATAAATTG 2694
3201 ----+----*----+----*----+----*----+----*----+----* 3250
msh10203 3161 TCAAAGTGATTATGGCTAATTACTAAAAT.....ATGAGAATGAATTACA 3205
|||||||||||| | | || |||||| || || ||| |
pj01545 2695 TCAAAGTGATTACTGGGTACTATTAAAATGATAGGTGGATATAAATGGAA 2744
3251 ----+----*----+----*----+----*----+----*----+----* 3300
msh10203 3206 TTAAACATTTTGTGTCATGATGACAGAA...CTCATACGCAGTAAGTCTG 3252
|||||||| ||| | | |||| | |||| | |||| |
pj01545 2745 GTAAACATTATGTAGTGATAATATAGAACCTCACATAGTAATCAAGTATA 2794
3301 ----+----*----+----*----+----*----+----*----+----* 3350
msh10203 3253 AAGTCTGGC.TCGCTGGAGACGCGAGGACTCAG................. 3284
|| | |||| | | |||||| | | || | |
pj01545 2795 AAATTTGGCATGGGTGGAGAAACAAAGAATAGGGAAGCTGCAAAAGATGA 2844
3351 ----+----*----+----*----+----*----+----*----+----* 3400
msh10203 3285 .................................................. 3285
pj01545 2845 ATTTAGAGAAGTTTTCATCTATACAATCAATTATTTTTACAGACTTTTTT 2894
3401 ----+----*----+----*----+----*----+----*----+----* 3450
msh10203 3285 .................................................. 3285
pj01545 2895 TTTTTTTTTTTGAGACGGAGTCTCGCTGTGTAGCCCAGGCTGGAGTGCAA 2944
3451 ----+----*----+----*----+----*----+----*----+----* 3500
msh10203 3285 .................................................. 3285
pj01545 2945 TGGTGAGATCTCAGCTCACTGCAACGCCTCTGCCTCCCAGGTTCAAGCGA 2994
3501 ----+----*----+----*----+----*----+----*----+----* 3550
msh10203 3285 ........................AGCTGGGAGGTTATGT.......... 3300
|||||||| | ||
pj01545 2995 TTCTCCTGCCTCAGCCTCCCGTGTAGCTGGGACTACAGGTGCATGCCACC 3044
3551 ----+----*----+----*----+----*----+----*----+----* 3600
msh10203 3301 .................................................. 3301
pj01545 3045 ATGCCCGGCTCATTTTTTGTATTTTTAGTAGAGACGGGGTTTCACCGTGT 3094
3601 ----+----*----+----*----+----*----+----*----+----* 3650
msh10203 3301 .................................................. 3301
pj01545 3095 TAGCCAGGATGGTCTCGATCTCCTGACCTCGTGATTCGCCCGCCTCGGCC 3144
3651 ----+----*----+----*----+----*----+----*----+----* 3700
msh10203 3301 .......GTGGTGGCGCTTTATGCACACACTTCTCTG.CAGACCTTCTGG 3342
||| ||| | | ||| | | | || ||| || | |
pj01545 3145 TCCCAAAGTGCTGGGATTACAGGCATAAGCCGCCGTGCCAGGCCCTTTTT 3194
3701 ----+----*----+----*----+----*----+----*----+----* 3750
msh10203 3343 ACTGAGTT.................CAGTCAGTGTGTGACTCCTACCTGG 3375
| || || | || | |||| ||| ||
pj01545 3195 ATAGACTTTTGAACTAAGAGGTTTCAAACCAAATCGCAACTCTTACTTGA 3244
3751 ----+----*----+----*----+----*----+----*----+----* 3800
msh10203 3376 TTTACTGAGATAAACGCGCCTCCTAGC..AGCTTCTAGAACTGCAGCCAG 3423
||||| | ||| | |||||||| | | || | || || | |
pj01545 3245 TTTAC....AGAAATGGGCCTCCTAACAAAATTTTCAAAATTGTGGTGGG 3290
3801 ----+----*----+----*----+----*----+----*----+----* 3850
msh10203 3424 ....CTTTTTATAAAAGAAGTTTTAATACAACATTGTTTAAAACAGTGAT 3469
|||||||||| ||||||| | | ||| | |||||||
pj01545 3291 ATTTCTTTTTATAAGGGAAGTTTAATATGGCATTATTTTCAGCCAGTGAT 3340
3851 ----+----*----+----*----+----*----+----*----+----* 3900
msh10203 3470 TTGGTAAGCTGAAGTATGTGTGCTCTTAGACTCGCAAAAACAACCTCTAT 3519
|||| | | | ||| || || | | | |||| ||||| ||
pj01545 3341 TTGGAAGG........TCTGTTTTCCTATAATTACTAAAATAACCTAAAT 3382
3901 ----+----*----+----*----+----*----+----*----+----* 3950
msh10203 3520 ATTCTTCAGTAATTAGAAACCGTGTGAACTCGGGAGCCTACTATAATAGG 3569
| ||||||| | | |||| | |||| | |||||| | | | |||
pj01545 3383 CATTTTCAGTATTCAAAAACTCTATGAATTTAAGAGCCTGTTGTGACAGG 3432
3951 ----+----*----+----*----+----*----+----*----+----* 4000
msh10203 3570 A..CTTGAGTTTATGACAAGCAGAAAACTAGGTTGGAATTGAAACATTTT 3617
| ||||| ||||||||||| | ||||| | ||||||||| | ||||||
pj01545 3433 ACTCTTGATTTTATGACAAG.AAAAAACCATGTTGGAATTCAGGCATTTT 3481
4001 ----+----*----+----*----+----*----+----*----+----* 4050
msh10203 3618 GTAAGGTACCTTAATCCTTGGTAATTATTAGCATATGATTATTGCCCTTC 3667
|| ||||||||||||| | ||| ||||| ||||||||||| | |||
pj01545 3482 GTTAGGTACCTTAATCATCAGTA...ATTAGTATATGATTATTTCATTTC 3528
4051 ----+----*----+----*----+----*----+----*----+----* 4100
msh10203 3668 CTACAAGGACTCTAGCATTGTAAGTAGTAAGTATGTATATATGTTCATAT 3717
|||||||||||||| ||||| ||| ||||| |||||||||||||||||
pj01545 3529 CTACAAGGACTCTATAGTTGTATGTATTAAGTGTGTATATATGTTCATAT 3578
4101 ----+----*----+----*----+----*----+----*----+----* 4150
msh10203 3718 GAACATGAAAGATATAGACAATAGAAATTAA.....CCCCAAGAGGATTC 3762
||||||| ||||||||| ||||||||||||| || ||||||||||
pj01545 3579 GAACATGCAAGATATAGGCAATAGAAATTAAGTAATCCAAAAGAGGATTC 3628
4151 ----+----*----+----*----+----*----+----*----+----* 4200
msh10203 3763 CGTTACTCATTTAAGTATCCTCCATTTAAA.ATGGTTTTATAAGATGACA 3811
||||| ||| | ||||||| ||| |||||| ||| ||||||| || | |
pj01545 3629 CGTTATTCACTAAAGTATCTTCCTTTTAAATTTGGATTTATAAAATCATA 3678
4201 ----+----*----+----*----+----*----+----*----+----* 4250
msh10203 3812 GTGCAGTAACTTTAAATGTAGATAATGCAGGCATCCTTAGCACCTCGGTC 3861
|||||||||||||||||||||||| | || ||| ||||||||||| ||
pj01545 3679 GTGCAGTAACTTTAAATGTAGATAGTTCAAACATTCTTAGCACCTCAATC 3728
4251 ----+----*----+----*----+----*----+----*----+----* 4300
msh10203 3862 TAGAGTTTTTAAGTAAACTTTGTACAAATGTAAATTAGTCTAAGAGGACA 3911
||| | ||||| |||| |||||| |||||||||||||| ||||||| |
pj01545 3729 TAGTATGTTTAATTAAAATTTGTATAAATGTAAATTAGTGTAAGAGGGTA 3778
4301 ----+----*----+----*----+----*----+----*----+----* 4350
msh10203 3912 AAATAATATCTAATCAAGTTATTTTTCAAAAGACTGCAATAAGTTTTTGG 3961
|||||| ||||||||||||||||||||||| ||||||||||||||||
pj01545 3779 AAATAA....TAATCAAGTTATTTTTCAAAAGATTGCAATAAGTTTTTGG 3824
4351 ----+----*----+----*----+----*----+----*----+----* 4400
msh10203 3962 TCTAAACCTAAACTTTGTTCATTTTGTATATATTATGTGTTAATTCTAAT 4011
||||||| |||||||||||||||||||| ||| | |||||||||||||||
pj01545 3825 TCTAAACTTAAACTTTGTTCATTTTGTACATACTCTGTGTTAATTCTAAT 3874
4401 ----+----*----+----*----+----*----+----*----+----* 4450
msh10203 4012 AGCACCATTGTGATGTGTATTTATATACAGTGTGCACAAAATGTTTGTGA 4061
||||| ||||||||||||||||||||||||||||| |||||||| ||||
pj01545 3875 TGCACCTTTGTGATGTGTATTTATATACAGTGTGCAGAAAATGTTCGTGA 3924
4451 ----+----*----+----*----+----*----+----*----+----* 4500
msh10203 4062 ATTTTTTATTATAATTGTAGATTATGTATGATGGCATTGCTTAAGATTGT 4111
| |||| |||| ||||||||||||||||||||||||||||||| || |||
pj01545 3925 AATTTTGATTACAATTGTAGATTATGTATGATGGCATTGCTTACGAATGT 3974
4501 ----+----*----+----*----+----*----+----*----+----* 4550
msh10203 4112 TTTGCTTGT..AAGAATTTGAAGGTGCAATCAAA.GCTACGAGTTT...G 4155
||||||||| || ||||| |||||||||||||| ||||| |||||
pj01545 3975 TTTGCTTGTAAAAAAATTTCAAGGTGCAATCAAATGCTACTAGTTTTTCT 4024
4551 ----+----*----+----*----+----*----+----*----+----* 4600
msh10203 4156 GATTTTTAAGAAGCCTTTAACCTA......TCAGCCCCTTTCCTTCTGTG 4199
|||||| || || | | | ||| | |||| || | | |||||
pj01545 4025 GATTTTCAAAAATCTATCTATCTAAAATATTAAGCCTTTTCCTTCCTGTG 4074
4601 ----+----*----+----*----+----*----+----*----+----* 4650
msh10203 4200 TGGTTCCAACTGAACAACTTTTTGTATT.AGGCATTTGCATCAAATTGCT 4248
| || | ||| || ||||||||||||| |||||||||||||||||||||
pj01545 4075 TAGTACTTACTAAATAACTTTTTGTATTCAGGCATTTGCATCAAATTGCT 4124
4651 ----+----*----+----*----+----*----+----*----+----* 4700
msh10203 4249 GAACAAAGTTAATAGCCACATTAAATCACCAATTTCAAAAGATTATTTGG 4298
|||||| | |||||||||||||| ||| |||| |||||| |||||||
pj01545 4125 GAACAAGATGAATAGCCACATTAATTCAATGATTTTAAAAGACTATTTGG 4174
4701 ----+----*----+----*----+----*----+----*----+----* 4750
msh10203 4299 GGAGGGTTTGGTCTATAATTTTTAAGCCCTATTTACATCCTAAGGTAGAA 4348
|||||||| ||| |||||||||| ||| |||||||||||| || ||||||
pj01545 4175 GGAGGGTTGGGTATATAATTTTTTAGCTCTATTTACATCCCAAAGTAGAA 4224
4751 ----+----*----+----*----+----*----+----*----+----* 4800
msh10203 4349 AGA......TTATATTTACTAGAGCTATTCAAAAAGTACACTTTTCTATA 4392
||| |||||||||||||||||||||||| | ||||||||||||||
pj01545 4225 AGATTAAATTTATATTTACTAGAGCTATTCAAAGAATACACTTTTCTATA 4274
4801 ----+----*----+----*----+----*----+----*----+----* 4850
msh10203 4393 TTGTAAAAGCAGGGCAGAAGAATAAATCATACAGAAAATAAACATTTATA 4442
|||||||| |||| ||| | | ||||||||||||||||||||||||||||
pj01545 4275 TTGTAAAAACAGGACAGCAAAGTAAATCATACAGAAAATAAACATTTATA 4324
4851 ----+----*----+----*----+----*----+----*----+----* 4900
msh10203 4443 CTATTCTGT......................................... 4451
|||||||||
pj01545 4325 CTATTCTGTAAAAAAGGTTTTGCATTTTTTCTTTAGTATAATAACACCAC 4374
4901 ----+----*----+----*----+----*----+----*----+----* 4950
msh10203 4452 .................................................. 4452
pj01545 4375 TTTATTAACCATTTAATATGCAAAAAACCTTTTAAATTATCTGAAGTAAA 4424
4951 ----+----*----+----*----+----*----+----*----+----* 5000
msh10203 4452 .................................................. 4452
pj01545 4425 TTTGACATTACTTCTGAAAACACACAACTAAAAAATTCTATCATTTTGCT 4474
5001 ----+----*----+----*----+----*-- 5032
msh10203 4452 ................................ 4452
pj01545 4475 CAGTTATTACTAACATAAATTGCTTTGAAATG 4506