Comparison of KIAA cDNA sequences between mouse and human (FLJ00251)

<< Original sequence data >>

mouse  mFLJ00251 (msh08255)     length:   3622 bp
human     (sj08895)     length:   4893 bp


<< Aligned sequence information (excl. stop, if exists.) >>

----------------------------------------------------------
            length    #match  #mismatch   %diff
----------------------------------------------------------
DNA

  CDS1 :      283       226       57      20.14
  Total:      283       226       57      20.14

amino acid

  CDS1 :       95        66       29      30.53
  Total:       95        66       29      30.53
----------------------------------------------------------


<< Alignment region (incl. stop, if exists.) >>

----------------------------------------------------------
                    cDNA      cDNA original    amino acid
----------------------------------------------------------
  CDS1 : mouse  3214 -  3495      3 -   314    929 -  1022
         human     1 -   297      1 -   474      1 -    99
----------------------------------------------------------


<< Alignment >>

*--[ CDS1 ]--*
             1 ----+----*----+----*----+----*----+----*----+----* 50
           929 F  E  R  S  Q  V  S  E  F  L  L  S  K  Q  H  A  I  945
msh08255  3214 TTTGAAAGAAGCCAGGTTTCAGAGTTCCTGCTCAGCAAGCAACATGCCAT 3263
               ||||| | |||||||| ||||||||||||||||||||||| |||||||||
sj08895      1 TTTGAGAAAAGCCAGGCTTCAGAGTTCCTGCTCAGCAAGCGACATGCCAT 50
             1 F  E  K  S  Q  A  S  E  F  L  L  S  K  R  H  A  I  17

            51 ----+----*----+----*----+----*----+----*----+----* 100
           946  V  P  R  L  Q  Q  L  M  A  A  A  L  A  E  L  E  G 962
msh08255  3264 TGTGCCCAGGCTGCAGCAGCTGATGGCAGCAGCATTGGCAGAGCTGGAAG 3313
               | |||||| |||||||||||||||||||||||||||||||||||||||||
sj08895     51 TATGCCCAAGCTGCAGCAGCTGATGGCAGCAGCATTGGCAGAGCTGGAAG 100
            18  M  P  K  L  Q  Q  L  M  A  A  A  L  A  E  L  E  G 34

           101 ----+----*----+----*----+----*----+----*----+----* 150
           963   L  L  A  K  A  L  S  G  P  F  M  D  P  S  Q  E   978
msh08255  3314 GCCTGCTAGCGAAGGCACTGTCTGGTCCCTTTATGGATCCTTCACAAGAA 3363
               ||||||| |||||||| || || |||||||||||||| ||  ||||||| 
sj08895    101 GCCTGCTTGCGAAGGCCCTCTCCGGTCCCTTTATGGACCCCACACAAGAT 150
            35   L  L  A  K  A  L  S  G  P  F  M  D  P  T  Q  D   50

           151 ----+----*----+----*----+----*----+----*----+----* 200
           979 Q  R  S  T  E  Q  Q  L  G  A  L  E  H  Q  F  L  N  995
msh08255  3364 CAGAGGAGCACTGAGCAACAGCTTGGTGCCTTGGAGCATCAGTTCCTGAA 3413
               |||||||| |||||||| ||||| |   || | |||| |||||||| |||
sj08895    151 CAGAGGAGTACTGAGCACCAGCTCGTCTCCCTAGAGCGTCAGTTCCAGAA 200
            51 Q  R  S  T  E  H  Q  L  V  S  L  E  R  Q  F  Q  N  67

           201 ----+----*----+----*----+----*----+----*----+----* 250
           996  I  L  N  N  F  N  A  L  C  N  A  Y  C  T  F  T  G 1012
msh08255  3414 TATACTCAATAACTTCAATGCCCTATGCAATGCTTACTGCACCTTCACTG 3463
                | | |||    | ||| ||  ||   | | || ||   || ||||||||
sj08895    201 CACAGTCAGCGGCCTCAGTGAACTGCACCACGCCTATGCCATCTTCACTG 250
            68  T  V  S  G  L  S  E  L  H  H  A  Y  A  I  F  T  G 84

           251 ----+----*----+----*----+----*----+----*----+-- 297
          1013   T  E  .  .  .  .  .  H  H  H  L  C  F  Y  P   1022
msh08255  3464 GTACTGAG...............CATCATCATCTCTGTTTTTACCCT 3495
               ||||||||               ||| ||||        |  |||||
sj08895    251 GTACTGAGGATCCCTGCACCCTCCATTATCACTCTGTGATAGACCCT 297
            85   T  E  D  P  C  T  L  H  Y  H  S  V  I  D  P   99