Comparison of KIAA cDNA sequences between mouse and human (FLJ00415)
<<Original sequence data>>
mouse mFLJ00415 (msh07154) length: 3135 bp, CDS: 2 - 2857
human (sg00017) length: 6528 bp, CDS: 4814 - 6094
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 14 - 4846 958 598 38.4
CDS: 4847 - 6124 1029 238 18.8
3'UTR: 6125 - 6583 155 125 44.6
amino acid
CDS: 4847 - 6124 356 66 15.6
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
msh07154 1 .............CACTTCTGCCTTCCAAGAAAGCCATGAGGGAGCCACC 37
| ||| |||| | || | ||| ||||
sg00017 1 GCAATGGCCTCCCCCATTCCGCCTCAAATGAGGACTCTGA......CACC 44
51 ----+----*----+----*----+----*----+----*----+----* 100
msh07154 38 TCAGACCTGGGGATGGCATACAACCGTGCCAGGATTTTGCCACACTCTGA 87
|||| || || ||| | |||| | | | ||
sg00017 45 TCAGTCCCTGGAGAGGC..........GAGAGGAAAGGGATTCCCAAGGA 84
101 ----+----*----+----*----+----*----+----*----+----* 150
msh07154 88 TGAGCAACTTGGGAACTCTTTGGCCA.GCAAGTCCAAGAAAAGTGTTGTC 136
||| | | || | | || || ||| | |||
sg00017 85 AAAGCTGCAGGAAAAATAAAAATAAATCCACATCAGAGAGCCGCGTTCGG 134
151 ----+----*----+----*----+----*----+----*----+----* 200
msh07154 137 GCAGAGACCCCCTCTGCCATCTTCCACTACTCAGAAAATTTCAGGGATGA 186
|| || | | | | | || | | ||| ||
sg00017 135 GCCGAAGCTCGGGACGAGACATCAGACCGCGAGAGCCGCGTTCGGGCCGA 184
201 ----+----*----+----*----+----*----+----*----+----* 250
msh07154 187 GACTGGGGCC.......................TGTGGGAAGACAGATGC 213
|| ||| | |||| || | ||
sg00017 185 AGCTCGGGACGAGACATCAGACTGCAAGTGAAGCTCGGGACGAGACATCA 234
251 ----+----*----+----*----+----*----+----*----+----* 300
msh07154 214 TATCTTCAGAGCTGCCACAAAGGACCTCCTTACCCTGATGAAGC...... 257
| | ||||| || | | || | ||| || ||
sg00017 235 GACCACGAGAGCAGCGTTCAGGCCGAAGCTCAGGATGAGGAGGCGGTTCT 284
301 ----+----*----+----*----+----*----+----*----+----* 350
msh07154 258 ...............................TAGATGACCCATCCCTGTT 276
| || | | ||||
sg00017 285 CCGTCTTTCTGTGCTCAGCAGCACTTTGGTGTGTGTGTGCATTGTTTGTT 334
351 ----+----*----+----*----+----*----+----*----+----* 400
msh07154 277 GGATGGCCGGGTGGCATTTCTTCATGTTCCTGCAGGCACCTTAGTGTCAA 326
| | | ||| | ||||| || || | | | || | | || |
sg00017 335 TGCTATCTGGGAGTTATTTCCTCCTGATTATAGAAGCCACCTGCCTTCCA 384
401 ----+----*----+----*----+----*----+----*----+----* 450
msh07154 327 AACAGGGAGATCAGGATG....TCAATATTTTGTTTGTGGTCTCGGGGAT 372
||| | ||| | || || | | ||| | |
sg00017 385 CTCAGCGCCTAGAGGCGGAGACACATCATCTGGGCCTGAGTCCCCCGCTC 434
451 ----+----*----+----*----+----*----+----*----+----* 500
msh07154 373 GCTGCATGTGTACCAGCAGAAGATTGACAGCTTGGAGGA..TACTTGC.. 418
| |||| | || || | | | || || | | |||
sg00017 435 CTCCCGTGTGGCCAAGGCTCAGCTGCAGTGAGGGGCTGAAGTGCGTGCGG 484
501 ----+----*----+----*----+----*----+----*----+----* 550
msh07154 419 ........CTGTTCCTCACACATCCCGGGGAGATGGTGGGTCAGCTGGCG 460
|| | |||| || | ||| | || | | ||| |
sg00017 485 TGAAGGTGATGCTGGGGACACCTCGCAGGGCGTGCCAGGTTGTGGTGGTG 534
551 ----+----*----+----*----+----*----+----*----+----* 600
msh07154 461 GTGCTCACTGGAGA...ACCCCTAATGTTCACCATCAGAGCCAACCGAGA 507
| | || || ||||| | || || || | ||
sg00017 535 GCCCAGGCTCCTGAGATGCCCCTGACAGGCAGGTGGAG.GCTGGATGGGA 583
601 ----+----*----+----*----+----*----+----*----+----* 650
msh07154 508 CTGCAGCTTTTTGTCCATCTCG...AAGGCCCACTTCTATGAGATCATGA 554
| || || | ||| || | || | | | | | |
sg00017 584 CGGCCTCTCGGGGGCCAGCTGGGGTTGGGTAGAACTGGAGGCTCTGTGGC 633
651 ----+----*----+----*----+----*----+----*----+----* 700
msh07154 555 GGAAACGGCCGGAT..GTTGTCCTGGGCGTGGCACACACAGTTGTGAAGA 602
| || ||||| | || || | ||| | | ||| | | |||
sg00017 634 TGGCACAGCCGGTTCCGTGCCGGTGTGGCTGGTTCCCCCAGAGGAGCAGA 683
701 ----+----*----+----*----+----*----+----*----+----* 750
msh07154 603 GGATGTCATCCTTTGTACGGCAGATTGATTTTGCTCT............. 639
|| || || ||| | | |||| | |
sg00017 684 GGCTGCCAGGAGGAACACGTGTGGAGGGTTTTATTTTGCTTCATTTTTCT 733
751 ----+----*----+----*----+----*----+----*----+----* 800
msh07154 640 .................................................. 640
sg00017 734 TGTCTGTCATTGTGGAGTTTTATCACAAAGGCTGTGTAGGCTGCAAAAAG 783
801 ----+----*----+----*----+----*----+----*----+----* 850
msh07154 640 .................................................. 640
sg00017 784 ACCTAAGAGCCCCCAGGCACGAGATGAAGACGTGGGCGCCTCCCTCTTAC 833
851 ----+----*----+----*----+----*----+----*----+----* 900
msh07154 640 .................................................. 640
sg00017 834 AGCTGCTCAGGTGGTGCTGAGGCGCCAGTGCCCCGGTTCTTTTCCTGCAC 883
901 ----+----*----+----*----+----*----+----*----+----* 950
msh07154 640 AGACTGGATGGAAGTAGAGGCTGGACGTGCCATATACAG........... 678
|||| | | | | | || | | | | ||| |
sg00017 884 AGACACAGCTGCACATGCGTCAGGCAGGGTCCTTTACTGGGGCTGCCGGT 933
951 ----+----*----+----*----+----*----+----*----+----* 1000
msh07154 679 .................................................. 679
sg00017 934 TTGGGTATTTACTCCAGGGCTGGGGTCCCCTCCAGGGGTCCATGAGCCCC 983
1001 ----+----*----+----*----+----*----+----*----+----* 1050
msh07154 679 .................................................. 679
sg00017 984 ACGGCGACACTTGGCCAGCCCTGCACTCCAGGCCGGCACTTTGGGCCACT 1033
1051 ----+----*----+----*----+----*----+----*----+----* 1100
msh07154 679 ..............................................GCAA 682
|||
sg00017 1034 CAGCTCCAAGCGCTTATCCCGACCAGGGCCCGGTGTGGATGCCTCTGCAC 1083
1101 ----+----*----+----*----+----*----+----*----+----* 1150
msh07154 683 GGAGACAAGTCTGACTGCACATACATCGTTCTCAGTGGCAGGCTGCGTTC 732
| || ||| || || | | || ||| || || |||| ||
sg00017 1084 GTCTCCAGCGCTGCTTGGTCACA.GCCCTTGGCAGAAGCTGGGTGCGGTC 1132
1151 ----+----*----+----*----+----*----+----*----+----* 1200
msh07154 733 TGTCATC........................................... 739
||| | |
sg00017 1133 TGTGAACAGCTGGGGATGCAGCTGGGCTTTGCAACCTCCAGGCAGAGATG 1182
1201 ----+----*----+----*----+----*----+----*----+----* 1250
msh07154 740 .................................................. 740
sg00017 1183 GGCACTGGACACTGAGCCCTTGGCAGCCGGTGCGCAGCACGCAACCGTCC 1232
1251 ----+----*----+----*----+----*----+----*----+----* 1300
msh07154 740 .................................................. 740
sg00017 1233 ATCCCTGGCTTACCTGCTGGGGCCAACCAAGCACTGGGCCCTGTCGGAAG 1282
1301 ----+----*----+----*----+----*----+----*----+----* 1350
msh07154 740 .................................................. 740
sg00017 1283 CTGGCACCGTGCTCAGGAAGCCAGTCAGGAAAGAACCTTCTCCTAGAGCT 1332
1351 ----+----*----+----*----+----*----+----*----+----* 1400
msh07154 740 ......................................CGAAAAGATGAT 751
| ||| |||
sg00017 1333 GCAGTCGAGTTGGGTCAGGGATGAAATTGGACCAAGAAGGCAAAAGAGAT 1382
1401 ----+----*----+----*----+----*----+----*----+----* 1450
msh07154 752 GGGAAAAAACGCCTGGCAGGGGAATATGGCC................... 782
|| | || | | || | || | || |
sg00017 1383 GGCTCAGAAGGGCGGGGGGAGGGGCAGGGGCACGCAGGTGGTGGGGCAGC 1432
1451 ----+----*----+----*----+----*----+----*----+----* 1500
msh07154 783 .................................GAGGAGACCTTGTTGGT 799
|| |||| || ||||
sg00017 1433 GCTCCCTGAGGAGGTCAGGACCCTTGGGGCCAGGAAGAGAGCTGTGTGGT 1482
1501 ----+----*----+----*----+----*----+----*----+----* 1550
msh07154 800 GTGGTGGAGA........................................ 809
|||| || |
sg00017 1483 GTGGGGGTCACCAGCAGCTCTCAGGGACCGCAGATGGGCTGAGGCTGCAG 1532
1551 ----+----*----+----*----+----*----+----*----+----* 1600
msh07154 810 .................................................. 810
sg00017 1533 ACTCTGGCTTGTTCTGAGTGGGGAGGGGCACCAGGGGCTTTGAGCAAAAA 1582
1601 ----+----*----+----*----+----*----+----*----+----* 1650
msh07154 810 .................................................. 810
sg00017 1583 AGGCTCCGGGCAGACTTGGGCGTCGAAGGCCAGCTCCGGCCACTGTGCAC 1632
1651 ----+----*----+----*----+----*----+----*----+----* 1700
msh07154 810 ........CGCTGACCCACCAGGCCAGAGCAACCACA............. 838
| || | || ||| ||| ||| ||
sg00017 1633 AGAGCGTCCTCTCAAGCAGGCGGCTGAAGCCACCCCAAGGCTGGGCGGTG 1682
1701 ----+----*----+----*----+----*----+----*----+----* 1750
msh07154 839 .................................................. 839
sg00017 1683 GAGGCCCAGGGCTCCCGGTGCTGAGTTGGACTGAGGGCGGGGACTGAGCT 1732
1751 ----+----*----+----*----+----*----+----*----+----* 1800
msh07154 839 .................................................. 839
sg00017 1733 TTGGTGGGTCGGGTAGGAGCCTGGGGCCGGAGGTGGGGGCCGAGTCCGAG 1782
1801 ----+----*----+----*----+----*----+----*----+----* 1850
msh07154 839 .................................................. 839
sg00017 1783 GGAGGATCTGGGGCTGTGTGAGTCTTGGACACTCATTCGGGATGTGGGAT 1832
1851 ----+----*----+----*----+----*----+----*----+----* 1900
msh07154 839 .................................................. 839
sg00017 1833 GGGCAGCATCATTTATCTGTTTCTGCCTGCATACAGGTACGGGTGTTTTT 1882
1901 ----+----*----+----*----+----*----+----*----+----* 1950
msh07154 839 .................................................. 839
sg00017 1883 CTTTTGGGAGGCCTTGAGTATTTATTTAATAATGGAATCACATTTATAAA 1932
1951 ----+----*----+----*----+----*----+----*----+----* 2000
msh07154 839 .................................................. 839
sg00017 1933 CCACTCTGCAGCTTTCCTGCTCAGCAGCACGTCATCAGCTATTTTCCTGT 1982
2001 ----+----*----+----*----+----*----+----*----+----* 2050
msh07154 839 .................................................. 839
sg00017 1983 GAGCACATGATTGCCGGCTGTGCGCTGGTTCTCCGAGCCATGTTCCCCGT 2032
2051 ----+----*----+----*----+----*----+----*----+----* 2100
msh07154 839 .................................................. 839
sg00017 2033 TCACAGGCTCTTACCCGCAGTGCTGCCACGGCGCCGTGTGCATCCCAGGA 2082
2101 ----+----*----+----*----+----*----+----*----+----* 2150
msh07154 839 .................................................. 839
sg00017 2083 TCTTGCAGGTGTCCGCTGGCCGCCGTCTGCAGGGAGTGGCCCTTAAGCCC 2132
2151 ----+----*----+----*----+----*----+----*----+----* 2200
msh07154 839 ....................GTGCATGCTGTCCGGGACTCAGAACTGGCT 868
|| |||| ||| || ||| || |
sg00017 2133 TCACTTGGTTCTGTGTCCCCAGGCTTGCTCTCCTGGCCTCTTCCCTCACC 2182
2201 ----+----*----+----*----+----*----+----*----+----* 2250
msh07154 869 AAGCTGCCAGCAGGAGCTCTGACGTCTATCAAGC................ 902
| || || | ||||||| | ||| |
sg00017 2183 ATGCCGCGTCCCCTTACTCTGACCTTGGCCAATCAGGACCTGCGTGTCTG 2232
2251 ----+----*----+----*----+----*----+----*----+----* 2300
msh07154 903 .................................................. 903
sg00017 2233 GTGGATTTTGGAAGCCACCTCACTGGGGACGGGAGACATAGGCCAGGGGA 2282
2301 ----+----*----+----*----+----*----+----*----+----* 2350
msh07154 903 .................................................. 903
sg00017 2283 CAGCCTGTGAGAGGGCTGGGCCACGGGGACTGCAGAGGAGGAGCATCCAC 2332
2351 ----+----*----+----*----+----*----+----*----+----* 2400
msh07154 903 ..............GCAGGTACCCACAGGTTGTAACGCGACTGATTCATC 938
| || | | || | | || | ||| | |
sg00017 2333 GGCACCTAGATGCAGGAGACCCTCGTGGGCAGGAGCGTGGCTGGTGGCAC 2382
2401 ----+----*----+----*----+----*----+----*----+----* 2450
msh07154 939 TCTTGGGCGAGAAGATCTTAGGCAGTCTCC.................... 968
| | || || | |||| ||| ||
sg00017 2383 GGTGGCCTCAGGAGCAGTGAGGCCGTCCCCTCAACCTCTTCTGTGGAAGC 2432
2451 ----+----*----+----*----+----*----+----*----+----* 2500
msh07154 969 .................................................. 969
sg00017 2433 AGAGATGCCACTCGCCAGACGGCGTCCAGTAAAGAGGGCCTGGGACCCTC 2482
2501 ----+----*----+----*----+----*----+----*----+----* 2550
msh07154 969 .................................................. 969
sg00017 2483 TGGGGGACTCTCAAGTCCCAGACCCCCTGGTCCATGTCCTTGCCACTGTG 2532
2551 ----+----*----+----*----+----*----+----*----+----* 2600
msh07154 969 .................................................. 969
sg00017 2533 CTGGCCGAGGGGCCCCTCAGCCCACATGGGGCCCAGGGAGAGGGTCCTGC 2582
2601 ----+----*----+----*----+----*----+----*----+----* 2650
msh07154 969 .................................................. 969
sg00017 2583 CTGTCTGGGCGGGCCCCTTGGTGGGCCCTGGAGGCTCCAGTCTCAGGGAG 2632
2651 ----+----*----+----*----+----*----+----*----+----* 2700
msh07154 969 .................................................. 969
sg00017 2633 AGGAAAGCCTGCTCTGGCTTGACACCCTCACTCGCGTCTCCGGGGTCTCC 2682
2701 ----+----*----+----*----+----*----+----*----+----* 2750
msh07154 969 .................................................. 969
sg00017 2683 AGGGCCTGGCCCAGGCTTCCCAGGGCTGCGGCTGTGCTTCCTTGGTTTCT 2732
2751 ----+----*----+----*----+----*----+----*----+----* 2800
msh07154 969 .................................................. 969
sg00017 2733 GGAATCCCTTGCAGATGACAGACAAGAGAAACGGGCCTATTGATGTCTAG 2782
2801 ----+----*----+----*----+----*----+----*----+----* 2850
msh07154 969 .................................................. 969
sg00017 2783 CCCGTGTGTTGTTTACTGTTCCTGGAGTGAGTGGTGGAAAGCCCTGCGAC 2832
2851 ----+----*----+----*----+----*----+----*----+----* 2900
msh07154 969 .................................................. 969
sg00017 2833 GATTGGTTCAGAGGATAAGGCCTCACCTGGAGAGTATGTCTTGTTTACTC 2882
2901 ----+----*----+----*----+----*----+----*----+----* 2950
msh07154 969 .................................................. 969
sg00017 2883 CGATGAGGCCTCACCTGGAGAGTGTGTCTGGTTTACTCCAATGAGGCCTC 2932
2951 ----+----*----+----*----+----*----+----*----+----* 3000
msh07154 969 .................................................. 969
sg00017 2933 ACCTGCAGCGTTTGTCTGGTTTACTCCGATGAGGCCTCACCTGCAGCGTT 2982
3001 ----+----*----+----*----+----*----+----*----+----* 3050
msh07154 969 .................................................. 969
sg00017 2983 TGTCTGGTTTACTCCGATGAGGCCTCACCTGCAGCGTTTGTCTGGTTTAC 3032
3051 ----+----*----+----*----+----*----+----*----+----* 3100
msh07154 969 .................................................. 969
sg00017 3033 TCCAGTGAGGCCTTACCTGCAGCGTTTGTCTGGTTTACTCCGATGAGGCC 3082
3101 ----+----*----+----*----+----*----+----*----+----* 3150
msh07154 969 .................................................. 969
sg00017 3083 TCACCTGCAGCGTTTGTCTGGTTTACTCTGAGCCTCACATTCCTTTCAGT 3132
3151 ----+----*----+----*----+----*----+----*----+----* 3200
msh07154 969 .................................................. 969
sg00017 3133 CGCTCCGTGAATCACTGTCTTTGGTGGGTCAGGAGGAATCCACTCCCTGG 3182
3201 ----+----*----+----*----+----*----+----*----+----* 3250
msh07154 969 .................................................. 969
sg00017 3183 GCCTGGGCCTGGACCAGTGCTGGTCAGACCTGCTGTGTGGGGCCTGGGGA 3232
3251 ----+----*----+----*----+----*----+----*----+----* 3300
msh07154 969 .................................................. 969
sg00017 3233 CGCTTGCAGGTGTGGACTGGCAGCTCATCAGGAAGAGCTGGGGAAGGCGT 3282
3301 ----+----*----+----*----+----*----+----*----+----* 3350
msh07154 969 .................................................. 969
sg00017 3283 GAGACCAAGACAGCCTCCGGCCTGGAGAAGGCGTGAGGCCTAGGCAGCCA 3332
3351 ----+----*----+----*----+----*----+----*----+----* 3400
msh07154 969 .........AGCAGGGATCTGCAACAGGTCACCAGCTTGGATTTAACACA 1009
| | | | |||| ||||||||||| | |||
sg00017 3333 CATGGCTGGGGACAGCGTGAGGCCCAGGCCACCAGCTTGGGCTCCCCACG 3382
3401 ----+----*----+----*----+----*----+----*----+----* 3450
msh07154 1010 GCAAGCAGCAAATGGGACTTGGGGAACCCGCCTGGCAATCTGTCCACAGT 1059
| ||||||| |||||||||||||||||| ||| ||| |||||||| ||
sg00017 3383 GAGGGCAGCAAGTGGGACTTGGGGAACCCGGCTGTCAACCTGTCCACGGT 3432
3451 ----+----*----+----*----+----*----+----*----+----* 3500
msh07154 1060 GGCAGCACTGCCTGCTTCTGAGGATGTGCCCCTAACCGCCTTTGCTCTGG 1109
||||| |||| | || ||||| |||||||| |||||||| || ||||
sg00017 3433 GGCAGTGATGCCCGTGTCAGAGGAAGTGCCCCTCACCGCCTTCGCCCTGG 3482
3501 ----+----*----+----*----+----*----+----*----+----* 3550
msh07154 1110 AGCTCCAACATGCCCTCAGTGCCATCGGTCCTGTCCTGCTGCTGACCAGT 1159
|||| | ||||||||||| |||||||| || |||||||||||| |||
sg00017 3483 AGCTGGAGCATGCCCTCAGCGCCATCGGCCCGACCCTGCTGCTGACTAGT 3532
3551 ----+----*----+----*----+----*----+----*----+----* 3600
msh07154 1160 GACAACATCAAACAACGCCTGGGTTCCGCTGCTCTAGACAGCATCCATGA 1209
|||||||| |||| ||||| || |||||||| || ||||| | || ||
sg00017 3533 GACAACATAAAACGGCGCCTTGGCTCCGCTGCCCTGGACAGTGTTCACGA 3582
3601 ----+----*----+----*----+----*----+----*----+----* 3650
msh07154 1210 GTACCGGCTCTCCAGTTGGCTGGGCCAGCAGGAGGACATCCACCGGATTG 1259
||||||||| ||||| |||||||| ||||||||||||| |||| |||| |
sg00017 3583 GTACCGGCTGTCCAGCTGGCTGGGGCAGCAGGAGGACACCCACAGGATCG 3632
3651 ----+----*----+----*----+----*----+----*----+----* 3700
msh07154 1260 TGCTGTATCAGGCAGACGGCACACTCACACCGTGGACCCAGCGCTGCATC 1309
|||| || |||||||| ||||| |||||||| ||||||||||||||| |
sg00017 3633 TGCTCTACCAGGCAGATGGCACGCTCACACCCTGGACCCAGCGCTGCGTG 3682
3701 ----+----*----+----*----+----*----+----*----+----* 3750
msh07154 1310 CGGCAGGCTGACTGCATCCTCATCGTGGGCTTGGGTGAGCAAGAGCCAGC 1359
|| ||||| ||||||||||||||||||||| ||||||| || ||||| |
sg00017 3683 CGCCAGGCCGACTGCATCCTCATCGTGGGCCTGGGTGACCAGGAGCCCAC 3732
3751 ----+----*----+----*----+----*----+----*----+----* 3800
msh07154 1360 AGTAGGTGAGCTGGAGCAGATGTTGGAGAGCACAGCTGTGCGTGCCCAGA 1409
||| || |||||||||| |||| |||||||||||||||||||||||||||
sg00017 3733 AGTGGGCGAGCTGGAGCGGATGCTGGAGAGCACAGCTGTGCGTGCCCAGA 3782
3801 ----+----*----+----*----+----*----+----*----+----* 3850
msh07154 1410 AGCAGCTAATCTTGCTGCACAAAGAGGACGGTCCAGTGCCTTCCCGCACA 1459
||||||| ||| ||||||||| ||||| || || | ||| | |||||
sg00017 3783 AGCAGCTGATCCTGCTGCACAGGGAGGAGGGCCCGGCGCCAGCGCGCACC 3832
3851 ----+----*----+----*----+----*----+----*----+----* 3900
msh07154 1460 GTGGAGTGGCTCAACATGCGAAGTTGGTGTTCTGGCCATTTGCACCTCTG 1509
|||||||||||||||||||| || ||||| || ||||| ||||||||||
sg00017 3833 GTGGAGTGGCTCAACATGCGGAGCTGGTGCTCCGGCCACCTGCACCTCTG 3882
3901 ----+----*----+----*----+----*----+----*----+----* 3950
msh07154 1510 CTGCCCACGCCGTGTCTTCTCCAAGAGAAGCTTGCCCAAGCT........ 1551
|||||| ||||| |||||||||| ||| ||| ||||||||||
sg00017 3883 CTGCCCGCGCCGCGTCTTCTCCAGGAGGAGCCTGCCCAAGCTGGTGAGGC 3932
3951 ----+----*----+----*----+----*----+----*----+----* 4000
msh07154 1552 .................................................. 1552
sg00017 3933 GGGGAGAGGAGGCTGCCTGCCCGTGGCTCCGTGGTTCATTTCCTCGAACG 3982
4001 ----+----*----+----*----+----*----+----*----+----* 4050
msh07154 1552 .................................................. 1552
sg00017 3983 TTCGAAGCATTCTTCACATTCCCCACCTGATTCCCTGACACCTGCGCTCC 4032
4051 ----+----*----+----*----+----*----+----*----+----* 4100
msh07154 1552 .................................................. 1552
sg00017 4033 TGGGCCCTTCCTGTGCTTGTGAACGTGACCCTGCCTCACGTCTCCTTCAT 4082
4101 ----+----*----+----*----+----*----+----*----+----* 4150
msh07154 1552 .................................................. 1552
sg00017 4083 CTTGCCCTTTGGGCCTCTGGTGGCCACGGCTAGGAAGCAGCCGGTGCGGT 4132
4151 ----+----*----+----*----+----*----+----*----+----* 4200
msh07154 1552 .................................................. 1552
sg00017 4133 GGGGGCAGGCACAGGGCGGCCATCGGGCTGGGGGCTCAGCGAACCCCGGG 4182
4201 ----+----*----+----*----+----*----+----*----+----* 4250
msh07154 1552 .................................................. 1552
sg00017 4183 GATGGGCCTGAATCAGGGGGCTCAGCAAACCCTGGGGATGGGCCTGACGT 4232
4251 ----+----*----+----*----+----*----+----*----+----* 4300
msh07154 1552 .................................................. 1552
sg00017 4233 CAGGGGGGCTCAGTGAACCCTGGGGGATGGGCCTCATGTCAGGGCTGCTC 4282
4301 ----+----*----+----*----+----*----+----*----+----* 4350
msh07154 1552 .................................................. 1552
sg00017 4283 AGGGCTGAGGCTGAGGCCCCCACATCCAGCTGATGAGGGTGTCCTCAGGC 4332
4351 ----+----*----+----*----+----*----+----*----+----* 4400
msh07154 1552 .................................................. 1552
sg00017 4333 CAGCGCTGCTCCCTCCTTTGGGCAGAAGGCCCTGAGACTTTTAATTCCGG 4382
4401 ----+----*----+----*----+----*----+----*----+----* 4450
msh07154 1552 .................................................. 1552
sg00017 4383 TGTCCTCAGGCAGCCCAGGGGCCTGAGAGTGAGGGGTGTGGGGAGTCTGC 4432
4451 ----+----*----+----*----+----*----+----*----+----* 4500
msh07154 1552 .................................................. 1552
sg00017 4433 TCATGCTCACGGCCCCCAGCCCACAGCTCTGTCCAGAAACCCACGCCCTG 4482
4501 ----+----*----+----*----+----*----+----*----+----* 4550
msh07154 1552 .................................................. 1552
sg00017 4483 AAGGCACCATCTGCTGCAGGATAGAGGGACCCCAGTGGGAACAGCTCTGA 4532
4551 ----+----*----+----*----+----*----+----*----+----* 4600
msh07154 1552 .................................................. 1552
sg00017 4533 GGATGCCTTCTGGCCCCCCACCCGGGCCCACTCTCTGGCCCCCCACCCGG 4582
4601 ----+----*----+----*----+----*----+----*----+----* 4650
msh07154 1552 .................................................. 1552
sg00017 4583 GCCCACTCTCTTGCCCACGTACCCTCTGCCAGTGTCCTCCCCCCAGTAGC 4632
4651 ----+----*----+----*----+----*----+----*----+----* 4700
msh07154 1552 .................................................. 1552
sg00017 4633 TGAGCTGTCTCTGGGGCCCGGTCCGGGCACTGAGGTGCTGACCAGTCGTA 4682
4701 ----+----*----+----*----+----*----+----*----+----* 4750
msh07154 1552 .................................................. 1552
sg00017 4683 TCAGGCAGGGCCTGCTGCATGCTGGAGAGGATTTGGGGTCAGTTTGGGTC 4732
4751 ----+----*----+----*----+----*----+----*----+----* 4800
msh07154 1552 .................................................. 1552
sg00017 4733 AGAAGTGGAGGAAACTCCCCCCAGTCAAGCCAGGATGCGAGGTCTCGGCC 4782
4801 ----+----*----+----*----+----*----+----*----+----* 4850
V E
msh07154 1552 .............................................GGTCG 1556
||| |
sg00017 4783 GAGGGTGGGGCCCTGCACCAGCCCTGCCTGACGGCTCCTCCCCCAGGTGG 4832
R L L P Q V E
4851 ----+----*----+----*----+----*----+----*----+----* 4900
M Y T R V F Q R P P D R H S D F
msh07154 1557 AGATGTACACACGTGTTTTCCAACGACCACCAGACCGTCATTCTGATTTT 1606
||||||||| | ||| ||||| || || || ||||| || || || ||
sg00017 4833 AGATGTACAAGCATGTCTTCCAGCGGCCCCCGGACCGACACTCAGACTTC 4882
M Y K H V F Q R P P D R H S D F
4901 ----+----*----+----*----+----*----+----*----+----* 4950
S R L A R M L T G N A I A L V L G
msh07154 1607 TCCCGCCTGGCACGGATGCTGACAGGCAATGCCATTGCCTTGGTGCTTGG 1656
||||||||||| || ||||||| ||||| ||||||||| ||||||||||
sg00017 4883 TCCCGCCTGGCGAGGGTGCTGACGGGCAACGCCATTGCCCTGGTGCTTGG 4932
S R L A R V L T G N A I A L V L G
4951 ----+----*----+----*----+----*----+----*----+----* 5000
G G G A R G C A Q V G I L R A L A
msh07154 1657 AGGGGGTGGAGCTAGAGGGTGTGCCCAGGTGGGCATCCTCAGGGCACTAG 1706
|| || ||||| ||||| ||||||||||||||| | |||| ||| | |
sg00017 4933 GGGAGGGGGAGCAAGAGGCTGTGCCCAGGTGGGCGTTCTCAAGGCCTTGG 4982
G G G A R G C A Q V G V L K A L A
5001 ----+----*----+----*----+----*----+----*----+----* 5050
E C G V P V D I I G G T S I G A
msh07154 1707 CAGAGTGTGGCGTCCCCGTGGACATAATCGGAGGCACATCCATCGGGGCT 1756
| ||||| ||| |||| |||||||| | |||||||| |||||||||||
sg00017 4983 CGGAGTGCGGCATCCCTGTGGACATGGTGGGAGGCACGTCCATCGGGGCC 5032
E C G I P V D M V G G T S I G A
5051 ----+----*----+----*----+----*----+----*----+----* 5100
F M G A L F A E E R S Y S Q T R I
msh07154 1757 TTCATGGGTGCTCTGTTTGCTGAGGAGCGGAGCTACAGCCAAACACGGAT 1806
||| ||||||| |||| |||||||||||| ||||||||| | |||||
sg00017 5033 TTCGTGGGTGCCCTGTACTCTGAGGAGCGGAACTACAGCCAGATGCGGAT 5082
F V G A L Y S E E R N Y S Q M R I
5101 ----+----*----+----*----+----*----+----*----+----* 5150
R A K Q W A E G M T S M M K T I L
msh07154 1807 CCGGGCCAAGCAGTGGGCAGAGGGTATGACATCAATGATGAAGACTATAC 1856
|||||||||||||||||| ||||| ||||| || |||||||| | |
sg00017 5083 CCGGGCCAAGCAGTGGGCCGAGGGCATGACGTCCTTGATGAAGGCCGCGC 5132
R A K Q W A E G M T S L M K A A L
5151 ----+----*----+----*----+----*----+----*----+----* 5200
D L T Y P I T S M F S G T G F N
msh07154 1857 TGGACCTGACCTACCCAATCACATCCATGTTCTCTGGCACTGGCTTCAAT 1906
||||||| |||||||| ||||| ||||||||||| || | ||||||||
sg00017 5133 TGGACCTCACCTACCCCATCACGTCCATGTTCTCCGGAGCCGGCTTCAAC 5182
D L T Y P I T S M F S G A G F N
5201 ----+----*----+----*----+----*----+----*----+----* 5250
S S I S N I F K D R Q I E D L W L
msh07154 1907 AGCAGCATCAGCAACATCTTCAAAGACCGGCAGATTGAGGACCTGTGGCT 1956
||||||||| || | ||||||| |||| |||||| |||||||||||| |
sg00017 5183 AGCAGCATCTTCAGCGTCTTCAAGGACCAGCAGATCGAGGACCTGTGGAT 5232
S S I F S V F K D Q Q I E D L W I
5251 ----+----*----+----*----+----*----+----*----+----* 5300
P Y F A I T T D I T A S A M R V H
msh07154 1957 CCCCTACTTTGCCATCACCACCGACATCACGGCCTCTGCCATGCGGGTTC 2006
|| || || |||||||||||||||||||| ||||| ||||||||||| |
sg00017 5233 TCCTTATTTCGCCATCACCACCGACATCACAGCCTCGGCCATGCGGGTCC 5282
P Y F A I T T D I T A S A M R V H
5301 ----+----*----+----*----+----*----+----*----+----* 5350
T D G S L W R Y V R A S M S L S
msh07154 2007 ACACAGATGGCTCTCTGTGGAGGTATGTCCGTGCAAGCATGTCCTTGTCA 2056
|||| || ||||| |||||| |||| || ||||| ||||||||| ||||
sg00017 5283 ACACCGACGGCTCCCTGTGGCGGTACGTGCGTGCCAGCATGTCCCTGTCC 5332
T D G S L W R Y V R A S M S L S
5351 ----+----*----+----*----+----*----+----*----+----* 5400
G Y M P P L C D P K D G H L L M D
msh07154 2057 GGCTATATGCCCCCACTCTGCGACCCCAAGGATGGACACCTGCTGATGGA 2106
|| || |||||||| ||||| ||||| ||||| |||||||||||||||||
sg00017 5333 GGTTACATGCCCCCTCTCTGTGACCCGAAGGACGGACACCTGCTGATGGA 5382
G Y M P P L C D P K D G H L L M D
5401 ----+----*----+----*----+----*----+----*----+----* 5450
G G Y I N N L P A D V A R S M G A
msh07154 2107 TGGTGGTTACATCAACAACCTCCCAGCGGATGTGGCAAGATCCATGGGGG 2156
|| || ||||||||||||||||||||||||||||| | ||||||||||
sg00017 5383 CGGGGGCTACATCAACAACCTCCCAGCGGATGTGGCCCGGTCCATGGGGG 5432
G G Y I N N L P A D V A R S M G A
5451 ----+----*----+----*----+----*----+----*----+----* 5500
K V V I A I D V G S R D E T D L
msh07154 2157 CAAAGGTTGTGATTGCCATCGATGTTGGCAGCCGGGACGAGACAGACCTC 2206
|||| || ||||| ||||| || || |||||||| || ||||| ||||||
sg00017 5433 CAAAAGTGGTGATCGCCATTGACGTGGGCAGCCGAGATGAGACGGACCTC 5482
K V V I A I D V G S R D E T D L
5501 ----+----*----+----*----+----*----+----*----+----* 5550
T N Y G D A L S G W W L L W K R W
msh07154 2207 ACCAACTATGGCGATGCCTTGTCTGGATGGTGGCTGCTTTGGAAACGCTG 2256
||||||||||| ||||| ||||||| ||||||||||| |||||||||||
sg00017 5483 ACCAACTATGGGGATGCGCTGTCTGGGTGGTGGCTGCTGTGGAAACGCTG 5532
T N Y G D A L S G W W L L W K R W
5551 ----+----*----+----*----+----*----+----*----+----* 5600
N P L A T K V K V L N M A E I Q T
msh07154 2257 GAACCCCTTGGCTACAAAAGTCAAGGTGTTGAACATGGCAGAGATTCAGA 2306
|||||||||||| || ||||||||||||||||||||||||||||||||||
sg00017 5533 GAACCCCTTGGCCACGAAAGTCAAGGTGTTGAACATGGCAGAGATTCAGA 5582
N P L A T K V K V L N M A E I Q T
5601 ----+----*----+----*----+----*----+----*----+----* 5650
R L A Y V C C V R Q L E M V K N
msh07154 2307 CTCGACTGGCCTATGTGTGCTGCGTCCGGCAGCTGGAGATGGTGAAGAAC 2356
| || |||||||| ||||| ||||| |||||||||||| ||||||||| |
sg00017 5583 CGCGCCTGGCCTACGTGTGTTGCGTGCGGCAGCTGGAGGTGGTGAAGAGC 5632
R L A Y V C C V R Q L E V V K S
5651 ----+----*----+----*----+----*----+----*----+----* 5700
S D Y C E Y L R P P I D S Y R T L
msh07154 2357 AGCGACTACTGTGAGTACCTGAGGCCTCCCATCGACAGTTACCGCACCCT 2406
|| |||||||| ||||||||| | || ||||||||||| ||| |||||||
sg00017 5633 AGTGACTACTGCGAGTACCTGCGCCCCCCCATCGACAGCTACAGCACCCT 5682
S D Y C E Y L R P P I D S Y S T L
5701 ----+----*----+----*----+----*----+----*----+----* 5750
D F G K F D E I C E V G Y Q H G R
msh07154 2407 GGACTTCGGCAAATTTGATGAGATCTGTGAAGTTGGGTATCAACATGGGC 2456
|||||||||||| || | |||||||| ||||| || || || || ||||
sg00017 5683 GGACTTCGGCAAGTTCAACGAGATCTGCGAAGTGGGCTACCAGCACGGGC 5732
D F G K F N E I C E V G Y Q H G R
5751 ----+----*----+----*----+----*----+----*----+----* 5800
T V F D I W V R S G V L E K M L
msh07154 2457 GGACAGTGTTTGACATCTGGGTCCGGAGTGGTGTCCTAGAGAAGATGTTG 2506
| || |||||||||||||||| ||| || || || || ||||||||| ||
sg00017 5733 GCACGGTGTTTGACATCTGGGGCCGCAGCGGCGTGCTGGAGAAGATGCTG 5782
T V F D I W G R S G V L E K M L
5801 ----+----*----+----*----+----*----+----*----+----* 5850
Q D Q Q G T S K R K D C G V F T C
msh07154 2507 CAGGACCAGCAGGGGACAAGCAAGAGGAAGGACTGTGGGGTGTTCACCTG 2556
| |||||||||||| | ||||||| | | ||| ||| |||||||
sg00017 5783 CGCGACCAGCAGGGGCCGAGCAAGAAGCCCGCGAGTGCGGTCCTCACCTG 5832
R D Q Q G P S K K P A S A V L T C
5851 ----+----*----+----*----+----*----+----*----+----* 5900
P N S S F T D L A E I V S R I E P
msh07154 2557 CCCCAATTCCTCCTTCACGGACCTTGCTGAGATTGTGTCACGGATTGAGC 2606
||||| ||||||||||||||||||| || |||||||| || |||||||
sg00017 5833 TCCCAACGCCTCCTTCACGGACCTTGCCGAAATTGTGTCTCGCATTGAGC 5882
P N A S F T D L A E I V S R I E P
5901 ----+----*----+----*----+----*----+----*----+----* 5950
A K V A A V D D E S D Y Q T E Y
msh07154 2607 CGGCCAAGGTGGCTGCAGTGGATGATGAGTCTGACTATCAGACCGAGTAT 2656
| |||||| || |||||||| || |||||||| ||||| |||||
sg00017 5883 CCGCCAAGCCCGCCATGGTGGATGACGAATCTGACTACCAGACGGAGTAC 5932
A K P A M V D D E S D Y Q T E Y
5951 ----+----*----+----*----+----*----+----*----+----* 6000
E E E L P A I P K E T Y A D F Q S
msh07154 2657 GAGGAGGAGCTGCCAGCCATCCCCAAGGAAACGTATGCTGACTTCCAGAG 2706
||||||||||||| | | |||||| ||| | || || |||||||||||
sg00017 5933 GAGGAGGAGCTGCTGGACGTCCCCAGGGATGCATACGCAGACTTCCAGAG 5982
E E E L L D V P R D A Y A D F Q S
6001 ----+----*----+----*----+----*----+----*----+----* 6050
T G I E L D S D S E Y E P S M L Q
msh07154 2707 CACTGGGATTGAGCTAGACTCTGACTCGGAATATGAGCCTTCGATGTTGC 2756
||| ||| | ||| |||| ||| | ||| | || || ||
sg00017 5983 CACCTCAGCCCAGCAGGGCTCAGACTTGGAGGACGAGTCCTCACTGCGGC 6032
T S A Q Q G S D L E D E S S L R H
6051 ----+----*----+----*----+----*----+----*----+----* 6100
G P P S L T S P E Q S Q D S S
msh07154 2757 AAGGACCCCCCAGCTTGACTTCCCCAGAACAGTCCCAGGACTCCTTCCCT 2806
| ||| |||||| || ||| |||| ||| ||| ||| |||||
sg00017 6033 ATCGACACCCCAGTCTGGCTTTCCCAAAACTGTCTGAGGGCTCCT..... 6077
R H P S L A F P K L S E G S S
6101 ----+----*----+----*----+----*----+----*----+----* 6150
N Q D D Q
msh07154 2807 TGGCTCCCTAATCAAGATGACCAGGGGCCAAGACTGGAACATCCTTCCTG 2856
|| | || || | || |||| || | ||
sg00017 6078 .......CTGACCAGGACGGGTAGAGGCCTCTGCTAAAGAGCCCGGATGC 6120
D Q D G *
6151 ----+----*----+----*----+----*----+----*----+----* 6200
msh07154 2857 ACTGGATAAATAAATAAAACACCTGGGCCTCACCCTTAGACTGAGGCTGC 2906
| | | | |||| || ||| || |||||||| |
sg00017 6121 AGCGTCT............TCCGTGGGACTGTCCCCAAGGCTGAGGCTCC 6158
6201 ----+----*----+----*----+----*----+----*----+----* 6250
msh07154 2907 ACCCATTCCTTAGAGGCTACTTCAGTTGCCTGACAAGATCAAACTGGATG 2956
||| | ||| ||| || | |||| | ||
sg00017 6159 TGCCAAGTCCTAGGGGCCTCTGTACCTGCCCTGCTGGA............ 6196
6251 ----+----*----+----*----+----*----+----*----+----* 6300
msh07154 2957 ATATAGCCATCTGGCTTCTTCCAGAGACATGGGCTGTGTTATTGGAGTCG 3006
|||| ||| |||| || | | | |||||||||| | ||
sg00017 6197 ....AGCC..CTGACTTC.CCCGGGGCCCCAGGCTGTGTTAGGGTTCTC. 6238
6301 ----+----*----+----*----+----*----+----*----+----* 6350
msh07154 3007 TGGGCCTCTTCACTTCCCCGGCACCCTTGTAT...............CCC 3041
||||||||||| | || ||| || || || |||
sg00017 6239 TGGGCCTCTTCTTTGTACCAGCAGCCCTGCATACAGGGCCCTGTGAGCCC 6288
6351 ----+----*----+----*----+----*----+----*----+----* 6400
msh07154 3042 CACAGCAGTACTGAGGAGCACGGACGCCTCTGTGAGGCATGGGAAG.... 3087
| | ||||| ||| | || | ||||||||||| ||||
sg00017 6289 CCCTGCAGTCCTGTGAGGCCCCTGAAGCTCTGTGAGGCCCCTGAAGCTCT 6338
6401 ----+----*----+----*----+----*----+----*----+----* 6450
msh07154 3088 .................................................. 3088
sg00017 6339 GTGAACCCCCTGCAGCCCTGTGAGGCCCCCCGAAGCCCTGTGAGGCCCCC 6388
6451 ----+----*----+----*----+----*----+----*----+----* 6500
msh07154 3088 .................................................. 3088
sg00017 6389 CGAAGCCCTGTGAACCACCTGCTGCCCTGTGAGGCCCCCAAAGCCCTGTG 6438
6501 ----+----*----+----*----+----*----+----*----+----* 6550
msh07154 3088 ...................................GTGGGATTGTTGAAC 3102
||| | | || |
sg00017 6439 AACTGCCTGCTGTCCTGTGAACTGCCTGCTGCCCTGTGAGGTGTGGGAGC 6488
6551 ----+----*----+----*----+----*----+----* 6590
msh07154 3103 TAATAAACGTTAATCTGATTGTGTGGCTATTTT....... 3135
| | | |||| | | |
sg00017 6489 CCTGATGCTGCCGTGTGATGTTTCAATAAAGGTGGATCTC 6528