# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/msh04351.fasta.nr -Q ../query/mKIAA1475.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1475, 787 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7920785 sequences Expectation_n fit: rho(ln(x))= 5.0734+/-0.000183; mu= 13.9670+/- 0.010 mean_var=72.1967+/-14.022, 0's: 25 Z-trim: 33 B-trim: 0 in 0/67 Lambda= 0.150944 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|48429259|sp|Q8R307.2|VPS18_MOUSE RecName: Full= ( 973) 5353 1175.4 0 gi|26325096|dbj|BAC26302.1| unnamed protein produc ( 973) 5344 1173.5 0 gi|26328995|dbj|BAC28236.1| unnamed protein produc ( 973) 5342 1173.0 0 gi|149023006|gb|EDL79900.1| vacuolar protein sorti ( 973) 5302 1164.3 0 gi|74195189|dbj|BAE28329.1| unnamed protein produc ( 974) 5247 1152.4 0 gi|23396938|sp|Q9P253.2|VPS18_HUMAN RecName: Full= ( 973) 5195 1141.0 0 gi|74000145|ref|XP_544627.2| PREDICTED: similar to (1095) 5194 1140.9 0 gi|151556109|gb|AAI50097.1| VPS18 protein [Bos tau ( 973) 5191 1140.2 0 gi|114656419|ref|XP_523187.2| PREDICTED: vacuolar ( 973) 5182 1138.2 0 gi|149692060|ref|XP_001503547.1| PREDICTED: simila ( 973) 5182 1138.2 0 gi|109080710|ref|XP_001099146.1| PREDICTED: simila ( 973) 5180 1137.8 0 gi|194034883|ref|XP_001929396.1| PREDICTED: simila ( 973) 5160 1133.4 0 gi|126277700|ref|XP_001370944.1| PREDICTED: simila ( 972) 4972 1092.5 0 gi|20071269|gb|AAH26870.1| Vps18 protein [Mus musc ( 714) 4846 1064.9 0 gi|74185291|dbj|BAE30122.1| unnamed protein produc ( 613) 4142 911.6 0 gi|224051134|ref|XP_002198949.1| PREDICTED: simila ( 962) 4056 893.0 0 gi|50748155|ref|XP_421131.1| PREDICTED: similar to ( 974) 4014 883.8 0 gi|26336845|dbj|BAC32106.1| unnamed protein produc ( 761) 3746 825.4 0 gi|183986168|gb|AAI66213.1| LOC100158548 protein [ ( 968) 3739 824.0 0 gi|49256142|gb|AAH73079.1| MGC82750 protein [Xenop ( 968) 3736 823.3 0 gi|146291098|sp|P59015.2|VPS18_DANRE RecName: Full ( 974) 3657 806.1 0 gi|159155116|gb|AAI54757.1| Vps18 protein [Danio r ( 974) 3650 804.6 0 gi|21105409|gb|AAM34648.1|AF506204_1 vacuolar prot ( 974) 3635 801.3 0 gi|47219153|emb|CAG01816.1| unnamed protein produc (1009) 3308 730.1 1e-207 gi|24660290|gb|AAH39043.1| Vps18 protein [Mus musc ( 652) 3156 696.9 6.8e-198 gi|149534596|ref|XP_001506026.1| PREDICTED: simila ( 612) 2998 662.4 1.5e-187 gi|210105349|gb|EEA53361.1| hypothetical protein B ( 916) 2603 576.6 1.6e-161 gi|210131544|gb|EEA79212.1| hypothetical protein B ( 986) 2480 549.8 1.9e-153 gi|156227041|gb|EDO47847.1| predicted protein [Nem ( 940) 2435 540.0 1.6e-150 gi|119612868|gb|EAW92462.1| vacuolar protein sorti ( 580) 2182 484.7 4.4e-134 gi|16306678|gb|AAH01513.1| VPS18 protein [Homo sap ( 580) 2181 484.5 5.1e-134 gi|119612867|gb|EAW92461.1| vacuolar protein sorti ( 521) 2170 482.1 2.5e-133 gi|66532439|ref|XP_396968.2| PREDICTED: similar to ( 718) 2080 462.6 2.5e-127 gi|91089169|ref|XP_974055.1| PREDICTED: similar to (1000) 1994 444.0 1.4e-121 gi|190585422|gb|EDV25490.1| hypothetical protein T ( 982) 1984 441.8 6.2e-121 gi|156553486|ref|XP_001600368.1| PREDICTED: simila (1015) 1978 440.5 1.6e-120 gi|212514237|gb|EEB16596.1| vacuolar protein sorti ( 922) 1875 418.0 8.3e-114 gi|215497498|gb|EEC06992.1| vacuolar membrane prot ( 911) 1867 416.3 2.8e-113 gi|221128359|ref|XP_002164045.1| PREDICTED: simila ( 965) 1639 366.7 2.5e-98 gi|193596404|ref|XP_001945645.1| PREDICTED: simila ( 954) 1612 360.8 1.5e-96 gi|193907347|gb|EDW06214.1| GI16496 [Drosophila mo ( 982) 1612 360.8 1.5e-96 gi|157019754|gb|EAL41676.3| AGAP000983-PA [Anophel (1008) 1592 356.4 3.2e-95 gi|54643742|gb|EAL32485.1| GA15921 [Drosophila pse (1003) 1533 343.6 2.3e-91 gi|194103821|gb|EDW25864.1| GL14267 [Drosophila pe (1003) 1532 343.4 2.7e-91 gi|108880170|gb|EAT44395.1| vacuolar protein sorti ( 978) 1522 341.2 1.2e-90 gi|194167740|gb|EDW82641.1| GK25025 [Drosophila wi (1009) 1515 339.7 3.5e-90 gi|7290189|gb|AAF45652.1| deep orange [Drosophila (1002) 1502 336.8 2.5e-89 gi|48429257|sp|Q24314.3|VPS18_DROME RecName: Full= (1002) 1502 336.8 2.5e-89 gi|201066183|gb|ACH92501.1| FI09617p [Drosophila m (1023) 1502 336.8 2.5e-89 gi|798832|emb|CAA60382.1| deep orange (dor) [Droso (1002) 1500 336.4 3.4e-89 >>gi|48429259|sp|Q8R307.2|VPS18_MOUSE RecName: Full=Vacu (973 aa) initn: 5353 init1: 5353 opt: 5353 Z-score: 6292.5 bits: 1175.4 E(): 0 Smith-Waterman score: 5353; 100.000% identity (100.000% similar) in 787 aa overlap (1-787:187-973) 10 20 30 mKIAA1 DLYFRPLYVLNEEGGPAPVCSLEAERGPDG :::::::::::::::::::::::::::::: gi|484 TGPILVGTAQGQIFEAELSASEGGLFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPDG 160 170 180 190 200 210 40 50 60 70 80 90 mKIAA1 RGFVIATTRQRLFQFIGRAVEDTEAQGFAGLFAAYTDHPPPFREFPSNLGYSELAFYTPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|484 RGFVIATTRQRLFQFIGRAVEDTEAQGFAGLFAAYTDHPPPFREFPSNLGYSELAFYTPK 220 230 240 250 260 270 100 110 120 130 140 150 mKIAA1 LRSAPRAFAWMMGDGVLYGSLDCGRPDSLLSEERVWEYPAGVGPGANPPLAIVLTQFHFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|484 LRSAPRAFAWMMGDGVLYGSLDCGRPDSLLSEERVWEYPAGVGPGANPPLAIVLTQFHFL 280 290 300 310 320 330 160 170 180 190 200 210 mKIAA1 LLLADRVEAVCTLTGQVVLRDHFLEKFGPLRHMVKDSSTGHLWAYTERAVFRYHVQREAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|484 LLLADRVEAVCTLTGQVVLRDHFLEKFGPLRHMVKDSSTGHLWAYTERAVFRYHVQREAR 340 350 360 370 380 390 220 230 240 250 260 270 mKIAA1 DVWRTYLDMNRFDLAKEYCRERPDCLDTVLAREADFCFRQHRYLESARCYALTQSYFEEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|484 DVWRTYLDMNRFDLAKEYCRERPDCLDTVLAREADFCFRQHRYLESARCYALTQSYFEEI 400 410 420 430 440 450 280 290 300 310 320 330 mKIAA1 ALKFLEARQEEALAEFLQRKLAGLKPTERTQATLLTTWLTELYLSRLGALQGDPDALTLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|484 ALKFLEARQEEALAEFLQRKLAGLKPTERTQATLLTTWLTELYLSRLGALQGDPDALTLY 460 470 480 490 500 510 340 350 360 370 380 390 mKIAA1 RDTRECFRTFLSSPRHKEWLFASRASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|484 RDTRECFRTFLSSPRHKEWLFASRASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQH 520 530 540 550 560 570 400 410 420 430 440 450 mKIAA1 EAYEEALAVLARHRDPQLFYKFSPILIRHIPRQLVDAWIEMGSRLDARQLIPALVNYSQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|484 EAYEEALAVLARHRDPQLFYKFSPILIRHIPRQLVDAWIEMGSRLDARQLIPALVNYSQG 580 590 600 610 620 630 460 470 480 490 500 510 mKIAA1 GEAQQVSQAIRYMEFCVNVLGETEQAIHNYLLSLYARGQPASLLAYLEQAGASPHRVHYD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|484 GEAQQVSQAIRYMEFCVNVLGETEQAIHNYLLSLYARGQPASLLAYLEQAGASPHRVHYD 640 650 660 670 680 690 520 530 540 550 560 570 mKIAA1 LKYALRLCAEHGHHRACVHVYKVLELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|484 LKYALRLCAEHGHHRACVHVYKVLELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLW 700 710 720 730 740 750 580 590 600 610 620 630 mKIAA1 LKIARHVVQEEEDVQTAMACLASCPLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|484 LKIARHVVQEEEDVQTAMACLASCPLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHI 760 770 780 790 800 810 640 650 660 670 680 690 mKIAA1 QELQREMEEATASAQRIRRDLQELRGRYGTVEPQDKCSTCDFPLLNRPFYLFLCGHMFHA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|484 QELQREMEEATASAQRIRRDLQELRGRYGTVEPQDKCSTCDFPLLNRPFYLFLCGHMFHA 820 830 840 850 860 870 700 710 720 730 740 750 mKIAA1 DCLLQAVRPGLPAYKQARLEELQRKLGAAPPPTKGSVKAKEAEAGAAAVGPSREQLKADL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|484 DCLLQAVRPGLPAYKQARLEELQRKLGAAPPPTKGSVKAKEAEAGAAAVGPSREQLKADL 880 890 900 910 920 930 760 770 780 mKIAA1 DELVAAECVYCGELMIRSIDRPFIDPQRYEEEHLSWL ::::::::::::::::::::::::::::::::::::: gi|484 DELVAAECVYCGELMIRSIDRPFIDPQRYEEEHLSWL 940 950 960 970 >>gi|26325096|dbj|BAC26302.1| unnamed protein product [M (973 aa) initn: 5344 init1: 5344 opt: 5344 Z-score: 6281.9 bits: 1173.5 E(): 0 Smith-Waterman score: 5344; 99.873% identity (99.873% similar) in 787 aa overlap (1-787:187-973) 10 20 30 mKIAA1 DLYFRPLYVLNEEGGPAPVCSLEAERGPDG :::::::::::::::::::::::::::::: gi|263 TGPILVGTAQGQIFEAELSASEGGLFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPDG 160 170 180 190 200 210 40 50 60 70 80 90 mKIAA1 RGFVIATTRQRLFQFIGRAVEDTEAQGFAGLFAAYTDHPPPFREFPSNLGYSELAFYTPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 RGFVIATTRQRLFQFIGRAVEDTEAQGFAGLFAAYTDHPPPFREFPSNLGYSELAFYTPK 220 230 240 250 260 270 100 110 120 130 140 150 mKIAA1 LRSAPRAFAWMMGDGVLYGSLDCGRPDSLLSEERVWEYPAGVGPGANPPLAIVLTQFHFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LRSAPRAFAWMMGDGVLYGSLDCGRPDSLLSEERVWEYPAGVGPGANPPLAIVLTQFHFL 280 290 300 310 320 330 160 170 180 190 200 210 mKIAA1 LLLADRVEAVCTLTGQVVLRDHFLEKFGPLRHMVKDSSTGHLWAYTERAVFRYHVQREAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LLLADRVEAVCTLTGQVVLRDHFLEKFGPLRHMVKDSSTGHLWAYTERAVFRYHVQREAR 340 350 360 370 380 390 220 230 240 250 260 270 mKIAA1 DVWRTYLDMNRFDLAKEYCRERPDCLDTVLAREADFCFRQHRYLESARCYALTQSYFEEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 DVWRTYLDMNRFDLAKEYCRERPDCLDTVLAREADFCFRQHRYLESARCYALTQSYFEEI 400 410 420 430 440 450 280 290 300 310 320 330 mKIAA1 ALKFLEARQEEALAEFLQRKLAGLKPTERTQATLLTTWLTELYLSRLGALQGDPDALTLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 ALKFLEARQEEALAEFLQRKLAGLKPTERTQATLLTTWLTELYLSRLGALQGDPDALTLY 460 470 480 490 500 510 340 350 360 370 380 390 mKIAA1 RDTRECFRTFLSSPRHKEWLFASRASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 RDTRECFRTFLSSPRHKEWLFASRASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQH 520 530 540 550 560 570 400 410 420 430 440 450 mKIAA1 EAYEEALAVLARHRDPQLFYKFSPILIRHIPRQLVDAWIEMGSRLDARQLIPALVNYSQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 EAYEEALAVLARHRDPQLFYKFSPILIRHIPRQLVDAWIEMGSRLDARQLIPALVNYSQG 580 590 600 610 620 630 460 470 480 490 500 510 mKIAA1 GEAQQVSQAIRYMEFCVNVLGETEQAIHNYLLSLYARGQPASLLAYLEQAGASPHRVHYD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 GEAQQVSQAIRYMEFCVNVLGETEQAIHNYLLSLYARGQPASLLAYLEQAGASPHRVHYD 640 650 660 670 680 690 520 530 540 550 560 570 mKIAA1 LKYALRLCAEHGHHRACVHVYKVLELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LKYALRLCAEHGHHRACVHVYKVLELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLW 700 710 720 730 740 750 580 590 600 610 620 630 mKIAA1 LKIARHVVQEEEDVQTAMACLASCPLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LKIARHVVQEEEDVQTAMACLASCPLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHI 760 770 780 790 800 810 640 650 660 670 680 690 mKIAA1 QELQREMEEATASAQRIRRDLQELRGRYGTVEPQDKCSTCDFPLLNRPFYLFLCGHMFHA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 QELQREMEEATASAQRIRRDLQELRGRYGTVEPQDKCSTCDFPLLNRPFYLFLCGHMFHA 820 830 840 850 860 870 700 710 720 730 740 750 mKIAA1 DCLLQAVRPGLPAYKQARLEELQRKLGAAPPPTKGSVKAKEAEAGAAAVGPSREQLKADL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 DCLLQAVRPGLPAYKQARLEELQRKLGAAPPPTKGSVKAKEAEAGAAAVGPSREQLKADL 880 890 900 910 920 930 760 770 780 mKIAA1 DELVAAECVYCGELMIRSIDRPFIDPQRYEEEHLSWL :::::: :::::::::::::::::::::::::::::: gi|263 DELVAAGCVYCGELMIRSIDRPFIDPQRYEEEHLSWL 940 950 960 970 >>gi|26328995|dbj|BAC28236.1| unnamed protein product [M (973 aa) initn: 5342 init1: 5342 opt: 5342 Z-score: 6279.5 bits: 1173.0 E(): 0 Smith-Waterman score: 5342; 99.873% identity (99.873% similar) in 787 aa overlap (1-787:187-973) 10 20 30 mKIAA1 DLYFRPLYVLNEEGGPAPVCSLEAERGPDG :::::::::::::::::::::::::::::: gi|263 TGPILVGTAQGQIFEAELSASEGGLFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPDG 160 170 180 190 200 210 40 50 60 70 80 90 mKIAA1 RGFVIATTRQRLFQFIGRAVEDTEAQGFAGLFAAYTDHPPPFREFPSNLGYSELAFYTPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 RGFVIATTRQRLFQFIGRAVEDTEAQGFAGLFAAYTDHPPPFREFPSNLGYSELAFYTPK 220 230 240 250 260 270 100 110 120 130 140 150 mKIAA1 LRSAPRAFAWMMGDGVLYGSLDCGRPDSLLSEERVWEYPAGVGPGANPPLAIVLTQFHFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LRSAPRAFAWMMGDGVLYGSLDCGRPDSLLSEERVWEYPAGVGPGANPPLAIVLTQFHFL 280 290 300 310 320 330 160 170 180 190 200 210 mKIAA1 LLLADRVEAVCTLTGQVVLRDHFLEKFGPLRHMVKDSSTGHLWAYTERAVFRYHVQREAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LLLADRVEAVCTLTGQVVLRDHFLEKFGPLRHMVKDSSTGHLWAYTERAVFRYHVQREAR 340 350 360 370 380 390 220 230 240 250 260 270 mKIAA1 DVWRTYLDMNRFDLAKEYCRERPDCLDTVLAREADFCFRQHRYLESARCYALTQSYFEEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 DVWRTYLDMNRFDLAKEYCRERPDCLDTVLAREADFCFRQHRYLESARCYALTQSYFEEI 400 410 420 430 440 450 280 290 300 310 320 330 mKIAA1 ALKFLEARQEEALAEFLQRKLAGLKPTERTQATLLTTWLTELYLSRLGALQGDPDALTLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 ALKFLEARQEEALAEFLQRKLAGLKPTERTQATLLTTWLTELYLSRLGALQGDPDALTLY 460 470 480 490 500 510 340 350 360 370 380 390 mKIAA1 RDTRECFRTFLSSPRHKEWLFASRASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 RDTRECFRTFLSSPRHKEWLFASRASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQH 520 530 540 550 560 570 400 410 420 430 440 450 mKIAA1 EAYEEALAVLARHRDPQLFYKFSPILIRHIPRQLVDAWIEMGSRLDARQLIPALVNYSQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 EAYEEALAVLARHRDPQLFYKFSPILIRHIPRQLVDAWIEMGSRLDARQLIPALVNYSQG 580 590 600 610 620 630 460 470 480 490 500 510 mKIAA1 GEAQQVSQAIRYMEFCVNVLGETEQAIHNYLLSLYARGQPASLLAYLEQAGASPHRVHYD ::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::: gi|263 GEAQQVSQAIRYMEFCVNVLGETEQAIHNYLLSLYARGQTASLLAYLEQAGASPHRVHYD 640 650 660 670 680 690 520 530 540 550 560 570 mKIAA1 LKYALRLCAEHGHHRACVHVYKVLELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LKYALRLCAEHGHHRACVHVYKVLELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLW 700 710 720 730 740 750 580 590 600 610 620 630 mKIAA1 LKIARHVVQEEEDVQTAMACLASCPLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 LKIARHVVQEEEDVQTAMACLASCPLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHI 760 770 780 790 800 810 640 650 660 670 680 690 mKIAA1 QELQREMEEATASAQRIRRDLQELRGRYGTVEPQDKCSTCDFPLLNRPFYLFLCGHMFHA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 QELQREMEEATASAQRIRRDLQELRGRYGTVEPQDKCSTCDFPLLNRPFYLFLCGHMFHA 820 830 840 850 860 870 700 710 720 730 740 750 mKIAA1 DCLLQAVRPGLPAYKQARLEELQRKLGAAPPPTKGSVKAKEAEAGAAAVGPSREQLKADL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 DCLLQAVRPGLPAYKQARLEELQRKLGAAPPPTKGSVKAKEAEAGAAAVGPSREQLKADL 880 890 900 910 920 930 760 770 780 mKIAA1 DELVAAECVYCGELMIRSIDRPFIDPQRYEEEHLSWL ::::::::::::::::::::::::::::::::::::: gi|263 DELVAAECVYCGELMIRSIDRPFIDPQRYEEEHLSWL 940 950 960 970 >>gi|149023006|gb|EDL79900.1| vacuolar protein sorting 1 (973 aa) initn: 5302 init1: 5302 opt: 5302 Z-score: 6232.4 bits: 1164.3 E(): 0 Smith-Waterman score: 5302; 98.475% identity (100.000% similar) in 787 aa overlap (1-787:187-973) 10 20 30 mKIAA1 DLYFRPLYVLNEEGGPAPVCSLEAERGPDG :::::::::::::::::::::::::::::: gi|149 TGPILVGTAQGQIFEAELSASEGGLFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPDG 160 170 180 190 200 210 40 50 60 70 80 90 mKIAA1 RGFVIATTRQRLFQFIGRAVEDTEAQGFAGLFAAYTDHPPPFREFPSNLGYSELAFYTPK ::::::::::::::::::::::.:::::.:::::::::::::::::.::::::::::::: gi|149 RGFVIATTRQRLFQFIGRAVEDAEAQGFSGLFAAYTDHPPPFREFPGNLGYSELAFYTPK 220 230 240 250 260 270 100 110 120 130 140 150 mKIAA1 LRSAPRAFAWMMGDGVLYGSLDCGRPDSLLSEERVWEYPAGVGPGANPPLAIVLTQFHFL :::::::::::::::::::::::::::::::::.:::::::.:::::::::::::::::: gi|149 LRSAPRAFAWMMGDGVLYGSLDCGRPDSLLSEEKVWEYPAGIGPGANPPLAIVLTQFHFL 280 290 300 310 320 330 160 170 180 190 200 210 mKIAA1 LLLADRVEAVCTLTGQVVLRDHFLEKFGPLRHMVKDSSTGHLWAYTERAVFRYHVQREAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LLLADRVEAVCTLTGQVVLRDHFLEKFGPLRHMVKDSSTGHLWAYTERAVFRYHVQREAR 340 350 360 370 380 390 220 230 240 250 260 270 mKIAA1 DVWRTYLDMNRFDLAKEYCRERPDCLDTVLAREADFCFRQHRYLESARCYALTQSYFEEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 DVWRTYLDMNRFDLAKEYCRERPDCLDTVLAREADFCFRQHRYLESARCYALTQSYFEEI 400 410 420 430 440 450 280 290 300 310 320 330 mKIAA1 ALKFLEARQEEALAEFLQRKLAGLKPTERTQATLLTTWLTELYLSRLGALQGDPDALTLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:: gi|149 ALKFLEARQEEALAEFLQRKLAGLKPTERTQATLLTTWLTELYLSRLGALQGDPDALNLY 460 470 480 490 500 510 340 350 360 370 380 390 mKIAA1 RDTRECFRTFLSSPRHKEWLFASRASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQH ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|149 RDTRECFRTFLSSPRHKEWLFASRASIHELLASHGDTEHMVYFAVIMQDYERVVTYHCQH 520 530 540 550 560 570 400 410 420 430 440 450 mKIAA1 EAYEEALAVLARHRDPQLFYKFSPILIRHIPRQLVDAWIEMGSRLDARQLIPALVNYSQG ::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::: gi|149 EAYEEALAVLARHRDPQLFYKFSPVLIRHIPRQLVDAWIEMGSRLDARQLIPALVNYSQG 580 590 600 610 620 630 460 470 480 490 500 510 mKIAA1 GEAQQVSQAIRYMEFCVNVLGETEQAIHNYLLSLYARGQPASLLAYLEQAGASPHRVHYD :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GDAQQVSQAIRYMEFCVNVLGETEQAIHNYLLSLYARGQPASLLAYLEQAGASPHRVHYD 640 650 660 670 680 690 520 530 540 550 560 570 mKIAA1 LKYALRLCAEHGHHRACVHVYKVLELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LKYALRLCAEHGHHRACVHVYKVLELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLW 700 710 720 730 740 750 580 590 600 610 620 630 mKIAA1 LKIARHVVQEEEDVQTAMACLASCPLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LKIARHVVQEEEDVQTAMACLASCPLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHI 760 770 780 790 800 810 640 650 660 670 680 690 mKIAA1 QELQREMEEATASAQRIRRDLQELRGRYGTVEPQDKCSTCDFPLLNRPFYLFLCGHMFHA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 QELQREMEEATASAQRIRRDLQELRGRYGTVEPQDKCSTCDFPLLNRPFYLFLCGHMFHA 820 830 840 850 860 870 700 710 720 730 740 750 mKIAA1 DCLLQAVRPGLPAYKQARLEELQRKLGAAPPPTKGSVKAKEAEAGAAAVGPSREQLKADL ::::::::::::.::::::::::::::.:::::::::::::::::::::::::::::::: gi|149 DCLLQAVRPGLPTYKQARLEELQRKLGTAPPPTKGSVKAKEAEAGAAAVGPSREQLKADL 880 890 900 910 920 930 760 770 780 mKIAA1 DELVAAECVYCGELMIRSIDRPFIDPQRYEEEHLSWL :::::::::::::::::::::::::::.::::::::: gi|149 DELVAAECVYCGELMIRSIDRPFIDPQHYEEEHLSWL 940 950 960 970 >>gi|74195189|dbj|BAE28329.1| unnamed protein product [M (974 aa) initn: 5247 init1: 5132 opt: 5247 Z-score: 6167.7 bits: 1152.4 E(): 0 Smith-Waterman score: 5247; 98.483% identity (98.483% similar) in 791 aa overlap (1-787:187-974) 10 20 mKIAA1 DLYFRPLYVLNEEGGPAPVCSLEAERG--- :::::::::::::::::: : : :: gi|741 TGPILVGTAQGQIFEAELSASEGGLFGPAPDLYFRPLYVLNEEGGPAP-CVL--PRGLSV 160 170 180 190 200 210 30 40 50 60 70 80 mKIAA1 -PDGRGFVIATTRQRLFQFIGRAVEDTEAQGFAGLFAAYTDHPPPFREFPSNLGYSELAF : : ::::::: ::::::::::::::::::::::::::::::::::::::::::::::: gi|741 TPMGGGFVIATTLQRLFQFIGRAVEDTEAQGFAGLFAAYTDHPPPFREFPSNLGYSELAF 220 230 240 250 260 270 90 100 110 120 130 140 mKIAA1 YTPKLRSAPRAFAWMMGDGVLYGSLDCGRPDSLLSEERVWEYPAGVGPGANPPLAIVLTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 YTPKLRSAPRAFAWMMGDGVLYGSLDCGRPDSLLSEERVWEYPAGVGPGANPPLAIVLTQ 280 290 300 310 320 330 150 160 170 180 190 200 mKIAA1 FHFLLLLADRVEAVCTLTGQVVLRDHFLEKFGPLRHMVKDSSTGHLWAYTERAVFRYHVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 FHFLLLLADRVEAVCTLTGQVVLRDHFLEKFGPLRHMVKDSSTGHLWAYTERAVFRYHVQ 340 350 360 370 380 390 210 220 230 240 250 260 mKIAA1 REARDVWRTYLDMNRFDLAKEYCRERPDCLDTVLAREADFCFRQHRYLESARCYALTQSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 REARDVWRTYLDMNRFDLAKEYCRERPDCLDTVLAREADFCFRQHRYLESARCYALTQSY 400 410 420 430 440 450 270 280 290 300 310 320 mKIAA1 FEEIALKFLEARQEEALAEFLQRKLAGLKPTERTQATLLTTWLTELYLSRLGALQGDPDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 FEEIALKFLEARQEEALAEFLQRKLAGLKPTERTQATLLTTWLTELYLSRLGALQGDPDA 460 470 480 490 500 510 330 340 350 360 370 380 mKIAA1 LTLYRDTRECFRTFLSSPRHKEWLFASRASIHELLASHGDTEHMVYFAVIMQDYERVVAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 LTLYRDTRECFRTFLSSPRHKEWLFASRASIHELLASHGDTEHMVYFAVIMQDYERVVAY 520 530 540 550 560 570 390 400 410 420 430 440 mKIAA1 HCQHEAYEEALAVLARHRDPQLFYKFSPILIRHIPRQLVDAWIEMGSRLDARQLIPALVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 HCQHEAYEEALAVLARHRDPQLFYKFSPILIRHIPRQLVDAWIEMGSRLDARQLIPALVN 580 590 600 610 620 630 450 460 470 480 490 500 mKIAA1 YSQGGEAQQVSQAIRYMEFCVNVLGETEQAIHNYLLSLYARGQPASLLAYLEQAGASPHR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 YSQGGEAQQVSQAIRYMEFCVNVLGETEQAIHNYLLSLYARGQPASLLAYLEQAGASPHR 640 650 660 670 680 690 510 520 530 540 550 560 mKIAA1 VHYDLKYALRLCAEHGHHRACVHVYKVLELYEEAVDLALQVDVDLAKQCADLPEEDEELR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 VHYDLKYALRLCAEHGHHRACVHVYKVLELYEEAVDLALQVDVDLAKQCADLPEEDEELR 700 710 720 730 740 750 570 580 590 600 610 620 mKIAA1 KKLWLKIARHVVQEEEDVQTAMACLASCPLLKIEDVLPFFPDFVTIDHFKEAICSSLKAY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 KKLWLKIARHVVQEEEDVQTAMACLASCPLLKIEDVLPFFPDFVTIDHFKEAICSSLKAY 760 770 780 790 800 810 630 640 650 660 670 680 mKIAA1 NHHIQELQREMEEATASAQRIRRDLQELRGRYGTVEPQDKCSTCDFPLLNRPFYLFLCGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 NHHIQELQREMEEATASAQRIRRDLQELRGRYGTVEPQDKCSTCDFPLLNRPFYLFLCGH 820 830 840 850 860 870 690 700 710 720 730 740 mKIAA1 MFHADCLLQAVRPGLPAYKQARLEELQRKLGAAPPPTKGSVKAKEAEAGAAAVGPSREQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 MFHADCLLQAVRPGLPAYKQARLEELQRKLGAAPPPTKGSVKAKEAEAGAAAVGPSREQL 880 890 900 910 920 930 750 760 770 780 mKIAA1 KADLDELVAAECVYCGELMIRSIDRPFIDPQRYEEEHLSWL ::::::::::::::::::::::::::::::::::::::::: gi|741 KADLDELVAAECVYCGELMIRSIDRPFIDPQRYEEEHLSWL 940 950 960 970 >>gi|23396938|sp|Q9P253.2|VPS18_HUMAN RecName: Full=Vacu (973 aa) initn: 5195 init1: 5195 opt: 5195 Z-score: 6106.5 bits: 1141.0 E(): 0 Smith-Waterman score: 5195; 96.569% identity (99.619% similar) in 787 aa overlap (1-787:187-973) 10 20 30 mKIAA1 DLYFRPLYVLNEEGGPAPVCSLEAERGPDG :::::::::::::::::::::::::::::: gi|233 TGPILVGTAQGHIFEAELSASEGGLFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPDG 160 170 180 190 200 210 40 50 60 70 80 90 mKIAA1 RGFVIATTRQRLFQFIGRAVEDTEAQGFAGLFAAYTDHPPPFREFPSNLGYSELAFYTPK :.:::::::::::::::::.: .:::::.::::::::::::::::::::::::::::::: gi|233 RSFVIATTRQRLFQFIGRAAEGAEAQGFSGLFAAYTDHPPPFREFPSNLGYSELAFYTPK 220 230 240 250 260 270 100 110 120 130 140 150 mKIAA1 LRSAPRAFAWMMGDGVLYGSLDCGRPDSLLSEERVWEYPAGVGPGANPPLAIVLTQFHFL :::::::::::::::::::.::::::::::::::::::: ::::::.::::::::::::: gi|233 LRSAPRAFAWMMGDGVLYGALDCGRPDSLLSEERVWEYPEGVGPGASPPLAIVLTQFHFL 280 290 300 310 320 330 160 170 180 190 200 210 mKIAA1 LLLADRVEAVCTLTGQVVLRDHFLEKFGPLRHMVKDSSTGHLWAYTERAVFRYHVQREAR ::::::::::::::::::::::::::::::.:::::::::.::::::::::::::::::: gi|233 LLLADRVEAVCTLTGQVVLRDHFLEKFGPLKHMVKDSSTGQLWAYTERAVFRYHVQREAR 340 350 360 370 380 390 220 230 240 250 260 270 mKIAA1 DVWRTYLDMNRFDLAKEYCRERPDCLDTVLAREADFCFRQHRYLESARCYALTQSYFEEI ::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::: gi|233 DVWRTYLDMNRFDLAKEYCRERPDCLDTVLAREADFCFRQRRYLESARCYALTQSYFEEI 400 410 420 430 440 450 280 290 300 310 320 330 mKIAA1 ALKFLEARQEEALAEFLQRKLAGLKPTERTQATLLTTWLTELYLSRLGALQGDPDALTLY ::::::::::::::::::::::.:::.:::::::::::::::::::::::::::.::::: gi|233 ALKFLEARQEEALAEFLQRKLASLKPAERTQATLLTTWLTELYLSRLGALQGDPEALTLY 460 470 480 490 500 510 340 350 360 370 380 390 mKIAA1 RDTRECFRTFLSSPRHKEWLFASRASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQH :.:.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|233 RETKECFRTFLSSPRHKEWLFASRASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQH 520 530 540 550 560 570 400 410 420 430 440 450 mKIAA1 EAYEEALAVLARHRDPQLFYKFSPILIRHIPRQLVDAWIEMGSRLDARQLIPALVNYSQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|233 EAYEEALAVLARHRDPQLFYKFSPILIRHIPRQLVDAWIEMGSRLDARQLIPALVNYSQG 580 590 600 610 620 630 460 470 480 490 500 510 mKIAA1 GEAQQVSQAIRYMEFCVNVLGETEQAIHNYLLSLYARGQPASLLAYLEQAGASPHRVHYD ::.:::::::::::::::::::::::::::::::::::.: ::::::::::::::::::: gi|233 GEVQQVSQAIRYMEFCVNVLGETEQAIHNYLLSLYARGRPDSLLAYLEQAGASPHRVHYD 640 650 660 670 680 690 520 530 540 550 560 570 mKIAA1 LKYALRLCAEHGHHRACVHVYKVLELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|233 LKYALRLCAEHGHHRACVHVYKVLELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLW 700 710 720 730 740 750 580 590 600 610 620 630 mKIAA1 LKIARHVVQEEEDVQTAMACLASCPLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|233 LKIARHVVQEEEDVQTAMACLASCPLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHI 760 770 780 790 800 810 640 650 660 670 680 690 mKIAA1 QELQREMEEATASAQRIRRDLQELRGRYGTVEPQDKCSTCDFPLLNRPFYLFLCGHMFHA :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: gi|233 QELQREMEEATASAQRIRRDLQELRGRYGTVEPQDKCATCDFPLLNRPFYLFLCGHMFHA 820 830 840 850 860 870 700 710 720 730 740 750 mKIAA1 DCLLQAVRPGLPAYKQARLEELQRKLGAAPPPTKGSVKAKEAEAGAAAVGPSREQLKADL ::::::::::::::::::::::::::::::::.:::..:::::.:::..::::::::::: gi|233 DCLLQAVRPGLPAYKQARLEELQRKLGAAPPPAKGSARAKEAEGGAATAGPSREQLKADL 880 890 900 910 920 930 760 770 780 mKIAA1 DELVAAECVYCGELMIRSIDRPFIDPQRYEEEHLSWL ::::::::::::::::::::::::::::::::.:::: gi|233 DELVAAECVYCGELMIRSIDRPFIDPQRYEEEQLSWL 940 950 960 970 >>gi|74000145|ref|XP_544627.2| PREDICTED: similar to vac (1095 aa) initn: 5194 init1: 5194 opt: 5194 Z-score: 6104.6 bits: 1140.9 E(): 0 Smith-Waterman score: 5194; 96.569% identity (99.492% similar) in 787 aa overlap (1-787:309-1095) 10 20 30 mKIAA1 DLYFRPLYVLNEEGGPAPVCSLEAERGPDG :::::::::::::::::::::::::::::: gi|740 TGPILVGTAQGQIFEAELSASEGGLFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPDG 280 290 300 310 320 330 40 50 60 70 80 90 mKIAA1 RGFVIATTRQRLFQFIGRAVEDTEAQGFAGLFAAYTDHPPPFREFPSNLGYSELAFYTPK :::::::::::::::::::.: ::::::.::::::.:::::::::::.:::::::::::: gi|740 RGFVIATTRQRLFQFIGRAAEGTEAQGFSGLFAAYADHPPPFREFPSSLGYSELAFYTPK 340 350 360 370 380 390 100 110 120 130 140 150 mKIAA1 LRSAPRAFAWMMGDGVLYGSLDCGRPDSLLSEERVWEYPAGVGPGANPPLAIVLTQFHFL :::::::::::::::::::.::::::::::::::::::: ::::::.::::::::::::: gi|740 LRSAPRAFAWMMGDGVLYGALDCGRPDSLLSEERVWEYPEGVGPGASPPLAIVLTQFHFL 400 410 420 430 440 450 160 170 180 190 200 210 mKIAA1 LLLADRVEAVCTLTGQVVLRDHFLEKFGPLRHMVKDSSTGHLWAYTERAVFRYHVQREAR :::.::::::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|740 LLLVDRVEAVCTLTGQVVLRDHFLEKFGPLKHMVKDSSTGHLWAYTERAVFRYHVQREAR 460 470 480 490 500 510 220 230 240 250 260 270 mKIAA1 DVWRTYLDMNRFDLAKEYCRERPDCLDTVLAREADFCFRQHRYLESARCYALTQSYFEEI ::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::: gi|740 DVWRTYLDMNRFDLAKEYCRERPDCLDTVLAREADFCFRQRRYLESARCYALTQSYFEEI 520 530 540 550 560 570 280 290 300 310 320 330 mKIAA1 ALKFLEARQEEALAEFLQRKLAGLKPTERTQATLLTTWLTELYLSRLGALQGDPDALTLY ::::::::::::::::::::::.:::.:::::::::::::::::::::::::::.::.:: gi|740 ALKFLEARQEEALAEFLQRKLASLKPAERTQATLLTTWLTELYLSRLGALQGDPEALNLY 580 590 600 610 620 630 340 350 360 370 380 390 mKIAA1 RDTRECFRTFLSSPRHKEWLFASRASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQH :.::: ::.::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 RETRERFRSFLSSPRHKEWLFASRASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQH 640 650 660 670 680 690 400 410 420 430 440 450 mKIAA1 EAYEEALAVLARHRDPQLFYKFSPILIRHIPRQLVDAWIEMGSRLDARQLIPALVNYSQG ::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::: gi|740 EAYEEALAVLARHRDPQLFYKFSPILIRHIPRQLVDAWIELGSRLDARQLIPALVNYSQG 700 710 720 730 740 750 460 470 480 490 500 510 mKIAA1 GEAQQVSQAIRYMEFCVNVLGETEQAIHNYLLSLYARGQPASLLAYLEQAGASPHRVHYD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 GEAQQVSQAIRYMEFCVNVLGETEQAIHNYLLSLYARGQPASLLAYLEQAGASPHRVHYD 760 770 780 790 800 810 520 530 540 550 560 570 mKIAA1 LKYALRLCAEHGHHRACVHVYKVLELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|740 LKYALRLCAEHGHHRACVHVYKVLELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLW 820 830 840 850 860 870 580 590 600 610 620 630 mKIAA1 LKIARHVVQEEEDVQTAMACLASCPLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHI :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|740 LKIARHVVQEEEDVQTAMACLASCPLLKIEDVLPFFPDFVTIDHFKEAICSSLRAYNHHI 880 890 900 910 920 930 640 650 660 670 680 690 mKIAA1 QELQREMEEATASAQRIRRDLQELRGRYGTVEPQDKCSTCDFPLLNRPFYLFLCGHMFHA :::::::::::::::::::::::::::::.:::::::.:::::::::::::::::::::: gi|740 QELQREMEEATASAQRIRRDLQELRGRYGAVEPQDKCATCDFPLLNRPFYLFLCGHMFHA 940 950 960 970 980 990 700 710 720 730 740 750 mKIAA1 DCLLQAVRPGLPAYKQARLEELQRKLGAAPPPTKGSVKAKEAEAGAAAVGPSREQLKADL :::::::::::::::::::::::::::::: :::::..:::::::::..::::::::::: gi|740 DCLLQAVRPGLPAYKQARLEELQRKLGAAPAPTKGSARAKEAEAGAATAGPSREQLKADL 1000 1010 1020 1030 1040 1050 760 770 780 mKIAA1 DELVAAECVYCGELMIRSIDRPFIDPQRYEEEHLSWL ::::::::::::::::::::::::::::::::::::: gi|740 DELVAAECVYCGELMIRSIDRPFIDPQRYEEEHLSWL 1060 1070 1080 1090 >>gi|151556109|gb|AAI50097.1| VPS18 protein [Bos taurus] (973 aa) initn: 5191 init1: 5191 opt: 5191 Z-score: 6101.8 bits: 1140.2 E(): 0 Smith-Waterman score: 5191; 96.569% identity (99.492% similar) in 787 aa overlap (1-787:187-973) 10 20 30 mKIAA1 DLYFRPLYVLNEEGGPAPVCSLEAERGPDG ::::::::::::::::::::::::::::.: gi|151 TGPILVGTAQGQIFEAELSASEGGLFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPEG 160 170 180 190 200 210 40 50 60 70 80 90 mKIAA1 RGFVIATTRQRLFQFIGRAVEDTEAQGFAGLFAAYTDHPPPFREFPSNLGYSELAFYTPK ::::::::::::::::::..: .:::::.::::::.:::::::::::.:::::::::::: gi|151 RGFVIATTRQRLFQFIGRVAEGAEAQGFSGLFAAYADHPPPFREFPSSLGYSELAFYTPK 220 230 240 250 260 270 100 110 120 130 140 150 mKIAA1 LRSAPRAFAWMMGDGVLYGSLDCGRPDSLLSEERVWEYPAGVGPGANPPLAIVLTQFHFL ::::::::::::::::::::::::::::::::::::::: ::::::.::::::::::::: gi|151 LRSAPRAFAWMMGDGVLYGSLDCGRPDSLLSEERVWEYPEGVGPGASPPLAIVLTQFHFL 280 290 300 310 320 330 160 170 180 190 200 210 mKIAA1 LLLADRVEAVCTLTGQVVLRDHFLEKFGPLRHMVKDSSTGHLWAYTERAVFRYHVQREAR ::::::::::::::::::::::::::::::.:::::::::::::.::::::::::::::: gi|151 LLLADRVEAVCTLTGQVVLRDHFLEKFGPLKHMVKDSSTGHLWAHTERAVFRYHVQREAR 340 350 360 370 380 390 220 230 240 250 260 270 mKIAA1 DVWRTYLDMNRFDLAKEYCRERPDCLDTVLAREADFCFRQHRYLESARCYALTQSYFEEI ::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::: gi|151 DVWRTYLDMNRFDLAKEYCRERPDCLDTVLAREADFCFRQRRYLESARCYALTQSYFEEI 400 410 420 430 440 450 280 290 300 310 320 330 mKIAA1 ALKFLEARQEEALAEFLQRKLAGLKPTERTQATLLTTWLTELYLSRLGALQGDPDALTLY ::::::::::::::::::::::.:::.:::::::::.::::::::::::::::::::.:: gi|151 ALKFLEARQEEALAEFLQRKLASLKPAERTQATLLTAWLTELYLSRLGALQGDPDALNLY 460 470 480 490 500 510 340 350 360 370 380 390 mKIAA1 RDTRECFRTFLSSPRHKEWLFASRASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQH :.::: ::.::::::::::::::::::::::::::::::::::::::::::::::::::: gi|151 RETRERFRSFLSSPRHKEWLFASRASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQH 520 530 540 550 560 570 400 410 420 430 440 450 mKIAA1 EAYEEALAVLARHRDPQLFYKFSPILIRHIPRQLVDAWIEMGSRLDARQLIPALVNYSQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|151 EAYEEALAVLARHRDPQLFYKFSPILIRHIPRQLVDAWIEMGSRLDARQLIPALVNYSQG 580 590 600 610 620 630 460 470 480 490 500 510 mKIAA1 GEAQQVSQAIRYMEFCVNVLGETEQAIHNYLLSLYARGQPASLLAYLEQAGASPHRVHYD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|151 GEAQQVSQAIRYMEFCVNVLGETEQAIHNYLLSLYARGQPASLLAYLEQAGASPHRVHYD 640 650 660 670 680 690 520 530 540 550 560 570 mKIAA1 LKYALRLCAEHGHHRACVHVYKVLELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|151 LKYALRLCAEHGHHRACVHVYKVLELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLW 700 710 720 730 740 750 580 590 600 610 620 630 mKIAA1 LKIARHVVQEEEDVQTAMACLASCPLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|151 LKIARHVVQEEEDVQTAMACLASCPLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHI 760 770 780 790 800 810 640 650 660 670 680 690 mKIAA1 QELQREMEEATASAQRIRRDLQELRGRYGTVEPQDKCSTCDFPLLNRPFYLFLCGHMFHA :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: gi|151 QELQREMEEATASAQRIRRDLQELRGRYGTVEPQDKCATCDFPLLNRPFYLFLCGHMFHA 820 830 840 850 860 870 700 710 720 730 740 750 mKIAA1 DCLLQAVRPGLPAYKQARLEELQRKLGAAPPPTKGSVKAKEAEAGAAAVGPSREQLKADL ::::::::::::::::::::::::::::::::.:::..:::::.:.:: ::::::::::: gi|151 DCLLQAVRPGLPAYKQARLEELQRKLGAAPPPAKGSARAKEAEGGTAAGGPSREQLKADL 880 890 900 910 920 930 760 770 780 mKIAA1 DELVAAECVYCGELMIRSIDRPFIDPQRYEEEHLSWL ::::::::::::::::::::::::::::::::::::: gi|151 DELVAAECVYCGELMIRSIDRPFIDPQRYEEEHLSWL 940 950 960 970 >>gi|114656419|ref|XP_523187.2| PREDICTED: vacuolar prot (973 aa) initn: 5182 init1: 5182 opt: 5182 Z-score: 6091.2 bits: 1138.2 E(): 0 Smith-Waterman score: 5182; 96.315% identity (99.619% similar) in 787 aa overlap (1-787:187-973) 10 20 30 mKIAA1 DLYFRPLYVLNEEGGPAPVCSLEAERGPDG :::::::::::::::::::::::::::::: gi|114 TGPILVGTAQGHIFEAELSASEGGLFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPDG 160 170 180 190 200 210 40 50 60 70 80 90 mKIAA1 RGFVIATTRQRLFQFIGRAVEDTEAQGFAGLFAAYTDHPPPFREFPSNLGYSELAFYTPK :.:::::::::::::::::.: .:::::.::::::::::::::::::::::::::::::: gi|114 RSFVIATTRQRLFQFIGRAAEGAEAQGFSGLFAAYTDHPPPFREFPSNLGYSELAFYTPK 220 230 240 250 260 270 100 110 120 130 140 150 mKIAA1 LRSAPRAFAWMMGDGVLYGSLDCGRPDSLLSEERVWEYPAGVGPGANPPLAIVLTQFHFL :::::::::::::::::::.::::::::::::::::::: ::::::.::::::::::::: gi|114 LRSAPRAFAWMMGDGVLYGALDCGRPDSLLSEERVWEYPEGVGPGASPPLAIVLTQFHFL 280 290 300 310 320 330 160 170 180 190 200 210 mKIAA1 LLLADRVEAVCTLTGQVVLRDHFLEKFGPLRHMVKDSSTGHLWAYTERAVFRYHVQREAR ::::::::::::::::::::::::::::::.:::::::::.::::::::::::::::::: gi|114 LLLADRVEAVCTLTGQVVLRDHFLEKFGPLKHMVKDSSTGQLWAYTERAVFRYHVQREAR 340 350 360 370 380 390 220 230 240 250 260 270 mKIAA1 DVWRTYLDMNRFDLAKEYCRERPDCLDTVLAREADFCFRQHRYLESARCYALTQSYFEEI ::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::: gi|114 DVWRTYLDMNRFDLAKEYCRERPDCLDTVLAREADFCFRQRRYLESARCYALTQSYFEEI 400 410 420 430 440 450 280 290 300 310 320 330 mKIAA1 ALKFLEARQEEALAEFLQRKLAGLKPTERTQATLLTTWLTELYLSRLGALQGDPDALTLY ::::::::::::::::::::::.:::.:::::::::::::::::::::::::.:.::::: gi|114 ALKFLEARQEEALAEFLQRKLASLKPAERTQATLLTTWLTELYLSRLGALQGNPEALTLY 460 470 480 490 500 510 340 350 360 370 380 390 mKIAA1 RDTRECFRTFLSSPRHKEWLFASRASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQH :.:.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RETKECFRTFLSSPRHKEWLFASRASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQH 520 530 540 550 560 570 400 410 420 430 440 450 mKIAA1 EAYEEALAVLARHRDPQLFYKFSPILIRHIPRQLVDAWIEMGSRLDARQLIPALVNYSQG :::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::: gi|114 EAYEEALAVLARHRDPQLFYKFSPILIRHIPHQLVDAWIEMGSRLDARQLIPALVNYSQG 580 590 600 610 620 630 460 470 480 490 500 510 mKIAA1 GEAQQVSQAIRYMEFCVNVLGETEQAIHNYLLSLYARGQPASLLAYLEQAGASPHRVHYD ::.:::::::::::::::::::::::::::::::::::.: ::::::::::::::::::: gi|114 GEVQQVSQAIRYMEFCVNVLGETEQAIHNYLLSLYARGRPDSLLAYLEQAGASPHRVHYD 640 650 660 670 680 690 520 530 540 550 560 570 mKIAA1 LKYALRLCAEHGHHRACVHVYKVLELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LKYALRLCAEHGHHRACVHVYKVLELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLW 700 710 720 730 740 750 580 590 600 610 620 630 mKIAA1 LKIARHVVQEEEDVQTAMACLASCPLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LKIARHVVQEEEDVQTAMACLASCPLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHI 760 770 780 790 800 810 640 650 660 670 680 690 mKIAA1 QELQREMEEATASAQRIRRDLQELRGRYGTVEPQDKCSTCDFPLLNRPFYLFLCGHMFHA :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: gi|114 QELQREMEEATASAQRIRRDLQELRGRYGTVEPQDKCATCDFPLLNRPFYLFLCGHMFHA 820 830 840 850 860 870 700 710 720 730 740 750 mKIAA1 DCLLQAVRPGLPAYKQARLEELQRKLGAAPPPTKGSVKAKEAEAGAAAVGPSREQLKADL ::::::::::::::::::::::::::::::::.:::..:::::.:::..::::::::::: gi|114 DCLLQAVRPGLPAYKQARLEELQRKLGAAPPPAKGSARAKEAEGGAATAGPSREQLKADL 880 890 900 910 920 930 760 770 780 mKIAA1 DELVAAECVYCGELMIRSIDRPFIDPQRYEEEHLSWL ::::::::::::::::::::::::::::::::.:::: gi|114 DELVAAECVYCGELMIRSIDRPFIDPQRYEEEQLSWL 940 950 960 970 >>gi|149692060|ref|XP_001503547.1| PREDICTED: similar to (973 aa) initn: 5182 init1: 5182 opt: 5182 Z-score: 6091.2 bits: 1138.2 E(): 0 Smith-Waterman score: 5182; 96.442% identity (99.365% similar) in 787 aa overlap (1-787:187-973) 10 20 30 mKIAA1 DLYFRPLYVLNEEGGPAPVCSLEAERGPDG :::::::::::::::::::::::::::::: gi|149 TGPILVGTAQGQIFEAELSASEGGLFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPDG 160 170 180 190 200 210 40 50 60 70 80 90 mKIAA1 RGFVIATTRQRLFQFIGRAVEDTEAQGFAGLFAAYTDHPPPFREFPSNLGYSELAFYTPK :::::::::::::::::::.: .:::::.::::::.:::::::::::.:::::::::::: gi|149 RGFVIATTRQRLFQFIGRAAEGAEAQGFSGLFAAYADHPPPFREFPSSLGYSELAFYTPK 220 230 240 250 260 270 100 110 120 130 140 150 mKIAA1 LRSAPRAFAWMMGDGVLYGSLDCGRPDSLLSEERVWEYPAGVGPGANPPLAIVLTQFHFL :::::::::::::::::::.::::::::::::::::::: :::::.::::::::::::: gi|149 LRSAPRAFAWMMGDGVLYGALDCGRPDSLLSEERVWEYPEEVGPGASPPLAIVLTQFHFL 280 290 300 310 320 330 160 170 180 190 200 210 mKIAA1 LLLADRVEAVCTLTGQVVLRDHFLEKFGPLRHMVKDSSTGHLWAYTERAVFRYHVQREAR ::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|149 LLLADRVEAVCTLTGQVVLRDHFLEKFGPLKHMVKDSSTGHLWAYTERAVFRYHVQREAR 340 350 360 370 380 390 220 230 240 250 260 270 mKIAA1 DVWRTYLDMNRFDLAKEYCRERPDCLDTVLAREADFCFRQHRYLESARCYALTQSYFEEI ::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::: gi|149 DVWRTYLDMNRFDLAKEYCRERPDCLDTVLAREADFCFRQRRYLESARCYALTQSYFEEI 400 410 420 430 440 450 280 290 300 310 320 330 mKIAA1 ALKFLEARQEEALAEFLQRKLAGLKPTERTQATLLTTWLTELYLSRLGALQGDPDALTLY ::::::::::::::::::::::::::.:::::::::::::::::::::::::::.::.:: gi|149 ALKFLEARQEEALAEFLQRKLAGLKPAERTQATLLTTWLTELYLSRLGALQGDPEALNLY 460 470 480 490 500 510 340 350 360 370 380 390 mKIAA1 RDTRECFRTFLSSPRHKEWLFASRASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQH :.::: ::.::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 RETRERFRAFLSSPRHKEWLFASRASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQH 520 530 540 550 560 570 400 410 420 430 440 450 mKIAA1 EAYEEALAVLARHRDPQLFYKFSPILIRHIPRQLVDAWIEMGSRLDARQLIPALVNYSQG ::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::: gi|149 EAYEEALAVLARHRDPQLFYKFSPILIRHIPRQLVDAWIELGSRLDARQLIPALVNYSQG 580 590 600 610 620 630 460 470 480 490 500 510 mKIAA1 GEAQQVSQAIRYMEFCVNVLGETEQAIHNYLLSLYARGQPASLLAYLEQAGASPHRVHYD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GEAQQVSQAIRYMEFCVNVLGETEQAIHNYLLSLYARGQPASLLAYLEQAGASPHRVHYD 640 650 660 670 680 690 520 530 540 550 560 570 mKIAA1 LKYALRLCAEHGHHRACVHVYKVLELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LKYALRLCAEHGHHRACVHVYKVLELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLW 700 710 720 730 740 750 580 590 600 610 620 630 mKIAA1 LKIARHVVQEEEDVQTAMACLASCPLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LKIARHVVQEEEDVQTAMACLASCPLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHI 760 770 780 790 800 810 640 650 660 670 680 690 mKIAA1 QELQREMEEATASAQRIRRDLQELRGRYGTVEPQDKCSTCDFPLLNRPFYLFLCGHMFHA :::::::::::::::::::::::::::::.:::::::.:::::::::::::::::::::: gi|149 QELQREMEEATASAQRIRRDLQELRGRYGAVEPQDKCATCDFPLLNRPFYLFLCGHMFHA 820 830 840 850 860 870 700 710 720 730 740 750 mKIAA1 DCLLQAVRPGLPAYKQARLEELQRKLGAAPPPTKGSVKAKEAEAGAAAVGPSREQLKADL ::::::::::::::::::::::::::::::::.:::...::::.:::: ::::::::::: gi|149 DCLLQAVRPGLPAYKQARLEELQRKLGAAPPPAKGSARVKEAEGGAAAGGPSREQLKADL 880 890 900 910 920 930 760 770 780 mKIAA1 DELVAAECVYCGELMIRSIDRPFIDPQRYEEEHLSWL :::::::::::::::::::::::::::.::::::::: gi|149 DELVAAECVYCGELMIRSIDRPFIDPQHYEEEHLSWL 940 950 960 970 787 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Sat Mar 14 11:20:54 2009 done: Sat Mar 14 11:29:07 2009 Total Scan time: 1083.420 Total Display time: 0.400 Function used was FASTA [version 34.26.5 April 26, 2007]