Comparison of KIAA cDNA sequences between mouse and human (KIAA0014)
<< Original sequence data >>
mouse mKIAA0014 (msh04335) length: 2839 bp
human KIAA0014 (ha00442) length: 5323 bp
<< Aligned sequence information (excl. stop, if exists.) >>
----------------------------------------------------------
length #match #mismatch %diff
----------------------------------------------------------
DNA
CDS1 : 171 150 21 12.28
CDS2 : 1149 977 172 14.97
Total: 1320 1127 193 14.62
3'UTR: 477 289 188 39.41
amino acid
CDS1 : 57 53 4 7.02
CDS2 : 383 359 24 6.27
Total: 440 412 28 6.36
----------------------------------------------------------
<< Alignment region (incl. stop, if exists.) >>
----------------------------------------------------------
cDNA cDNA original amino acid
----------------------------------------------------------
CDS1 : mouse 871 - 1041 832 - 1245 14 - 70
human 123 - 293 87 - 1628 13 - 69
CDS2 : mouse 1221 - 2372 1041 - 2372 1 - 384
human 477 - 1628 87 - 1628 131 - 514
3'UTR: mouse 2373 - 2839
human 1629 - 5323
----------------------------------------------------------
<< Alignment >>
*--[ CDS1 ]--*
1 ----+----*----+----*----+----*----+----*----+----* 50
14 W L S A Q S S T M H T L V F L S T 30
msh04335 871 TGGCTGTCTGCCCAGTCCAGCACCATGCACACACTTGTGTTCCTCAGCAC 920
|||| |||||||| | |||||||||||||||| ||||||||| | |||||
ha00442 123 TGGCCGTCTGCCCGGCCCAGCACCATGCACACGCTTGTGTTCTTGAGCAC 172
13 W P S A R P S T M H T L V F L S T 29
51 ----+----*----+----*----+----*----+----*----+----* 100
31 R Q V L Q C Q P A A C Q A L P L L 47
msh04335 921 GCGTCAGGTCCTTCAGTGCCAGCCAGCTGCATGCCAGGCCCTGCCCCTGC 970
|| ||||| || ||||||||||||||||| |||||||||||||||||||
ha00442 173 ACGGCAGGTGCTGCAGTGCCAGCCAGCTGCCTGCCAGGCCCTGCCCCTGC 222
30 R Q V L Q C Q P A A C Q A L P L L 46
101 ----+----*----+----*----+----*----+----*----+----* 150
48 P R E L F P L L F K V A F M D K 63
msh04335 971 TGCCCCGGGAACTCTTCCCTCTGCTCTTCAAGGTGGCCTTCATGGACAAA 1020
|||| || ||||||||||| ||||| |||||||||||||||||||||||
ha00442 223 TGCCACGCGAACTCTTCCCCCTGCTGTTCAAGGTGGCCTTCATGGACAAG 272
47 P R E L F P L L F K V A F M D K 62
151 ----+----*----+----*- 171
64 K T L V L R E 70
msh04335 1021 AAGACGCTTGTGCTGCGTGAG 1041
||||| | || ||||| |||
ha00442 273 AAGACAGTGGTACTGCGCGAG 293
63 K T V V L R E 69
*--[ CDS2 ]--*
1 ----+----*----+----*----+----*----+----*----+----* 50
1 Q H A L R V L D M T G L L D D G V 17
msh04335 1221 CAGCATGCATTGCGGGTTCTGGACATGACGGGTCTCCTGGATGATGGTGT 1270
||||||| ||||||| |||||||||||||| ||| |||||||||||||
ha00442 477 AAGCATGCGCTGCGGGTGCTGGACATGACGGGCCTCTTGGATGATGGTGT 526
131 K H A L R V L D M T G L L D D G V 147
51 ----+----*----+----*----+----*----+----*----+----* 100
18 E Q D P E T M S M W D C T A A V A 34
msh04335 1271 GGAGCAGGATCCTGAAACCATGAGCATGTGGGACTGTACAGCCGCTGTAG 1320
||| |||||||||| ||||||||||||||||||||||| || || ||||
ha00442 527 GGAACAGGATCCTGGCACCATGAGCATGTGGGACTGTACTGCTGCCGTAG 576
148 E Q D P G T M S M W D C T A A V A 164
101 ----+----*----+----*----+----*----+----*----+----* 150
35 R T C I A Q Q Q G G T A E P G L 50
msh04335 1321 CCAGAACGTGCATTGCCCAGCAGCAGGGTGGGACTGCCGAGCCAGGGCTG 1370
| | || |||||||||||||||||||||||| | || ||||| ||||
ha00442 577 CTCGCACATGCATTGCCCAGCAGCAGGGTGGGGCCGCAGAGCCTGGGCCA 626
165 R T C I A Q Q Q G G A A E P G P 180
151 ----+----*----+----*----+----*----+----*----+----* 200
51 S P V P V E I R V D L R V N R A S 67
msh04335 1371 TCACCAGTCCCCGTGGAAATCCGAGTAGACCTTCGGGTAAACCGGGCCTC 1420
| || |||||||||| | || || ||||| ||||| |||||||||||
ha00442 627 GCCCCCATCCCCGTGGAGGTGCGCGTGGACCTGCGGGTGAACCGGGCCTC 676
181 A P I P V E V R V D L R V N R A S 197
201 ----+----*----+----*----+----*----+----*----+----* 250
68 Y T F L R E A L Q S S V A S P L R 84
msh04335 1421 GTACACATTCCTTCGTGAGGCCCTCCAAAGCAGTGTGGCCAGCCCGCTGC 1470
|| | ||||| || ||||| |||| |||||| |||| |||||||||||
ha00442 677 CTATGCGTTCCTGCGGGAGGCACTCCGAAGCAGCGTGGGCAGCCCGCTGC 726
198 Y A F L R E A L R S S V G S P L R 214
251 ----+----*----+----*----+----*----+----*----+----* 300
85 L C C R D L R A E D L P M R N T 100
msh04335 1471 GGCTGTGCTGCCGGGACCTGCGGGCTGAGGATCTACCCATGCGTAACACT 1520
|||| ||||||||||||||||| |||||||| || |||||||| ||||||
ha00442 727 GGCTCTGCTGCCGGGACCTGCGAGCTGAGGACCTGCCCATGCGCAACACT 776
215 L C C R D L R A E D L P M R N T 230
301 ----+----*----+----*----+----*----+----*----+----* 350
101 V A L L Q L L D A G C L R R I D L 117
msh04335 1521 GTGGCCCTGCTACAGCTTTTAGATGCAGGCTGTCTGCGCCGGATAGACCT 1570
||||||||||| |||||| | ||||||||||| |||||||| | |||||
ha00442 777 GTGGCCCTGCTGCAGCTTCTGGATGCAGGCTGCCTGCGCCGCGTGGACCT 826
231 V A L L Q L L D A G C L R R V D L 247
351 ----+----*----+----*----+----*----+----*----+----* 400
118 R F N N L G L R G L S V I I P H V 134
msh04335 1571 GCGCTTCAATAACCTGGGCTTGCGTGGCCTGTCTGTCATTATCCCACATG 1620
||||||||| || |||||| |||| ||||||||||| || |||||||| |
ha00442 827 GCGCTTCAACAATCTGGGCCTGCGCGGCCTGTCTGTGATCATCCCACACG 876
248 R F N N L G L R G L S V I I P H V 264
401 ----+----*----+----*----+----*----+----*----+----* 450
135 A R F Q H L A S L R L H Y V H G 150
msh04335 1621 TGGCCCGCTTTCAGCACTTAGCTAGCCTGAGGCTGCACTACGTGCATGGG 1670
|||||||||| |||||| | || |||||| |||| ||||| |||||||||
ha00442 877 TGGCCCGCTTCCAGCACCTGGCCAGCCTGCGGCTCCACTATGTGCATGGG 926
265 A R F Q H L A S L R L H Y V H G 280
451 ----+----*----+----*----+----*----+----*----+----* 500
151 D S R Q P S V D G E D N F R Y F L 167
msh04335 1671 GACTCAAGACAGCCTTCCGTGGACGGGGAGGACAACTTTCGCTACTTTCT 1720
|| ||||| ||||| |||||||| || ||||||||||| |||||||| ||
ha00442 927 GATTCAAGGCAGCCCTCCGTGGATGGCGAGGACAACTTCCGCTACTTCCT 976
281 D S R Q P S V D G E D N F R Y F L 297
501 ----+----*----+----*----+----*----+----*----+----* 550
168 A Q M G R F M C L R E L S M G S S 184
msh04335 1721 GGCCCAGATGGGCCGGTTTATGTGTCTTCGGGAGCTCAGCATGGGGTCTT 1770
|||||||||||||| || | ||||| || |||||||||||||| || |
ha00442 977 TGCCCAGATGGGCCGCTTCACCTGTCTGCGTGAGCTCAGCATGGGCTCCT 1026
298 A Q M G R F T C L R E L S M G S S 314
551 ----+----*----+----*----+----*----+----*----+----* 600
185 L L S G R L D Q L L S T L Q R P 200
msh04335 1771 CTCTCCTTTCAGGCAGGCTGGATCAACTGCTCAGCACCCTGCAGAGGCCC 1820
||||||||||||| |||||||| || |||||||||||||||||||| |||
ha00442 1027 CTCTCCTTTCAGGGAGGCTGGACCAGCTGCTCAGCACCCTGCAGAGCCCC 1076
315 L L S G R L D Q L L S T L Q S P 330
601 ----+----*----+----*----+----*----+----*----+----* 650
201 L E S L E L A F C A L L P E D L C 217
msh04335 1821 CTGGAAAGCCTAGAACTGGCCTTCTGTGCGCTCTTGCCTGAGGACCTATG 1870
||||| ||||| || ||||||||||||| || |||||||||||||| |
ha00442 1077 CTGGAGAGCCTGGAGTTGGCCTTCTGTGCTCTGCTGCCTGAGGACCTACG 1126
331 L E S L E L A F C A L L P E D L R 347
651 ----+----*----+----*----+----*----+----*----+----* 700
218 F L A Q S S H A A H L K K L D L S 234
msh04335 1871 CTTCCTGGCTCAGAGTTCTCATGCTGCCCATCTCAAAAAGTTGGATTTGA 1920
||||||||| | ||| | ||||||||||| ||||| |||||||| |||
ha00442 1127 CTTCCTGGCACGGAGCCCACATGCTGCCCACCTCAAGAAGTTGGACCTGA 1176
348 F L A R S P H A A H L K K L D L S 364
701 ----+----*----+----*----+----*----+----*----+----* 750
235 G N D L S G N Q L T P F Q G L L 250
msh04335 1921 GTGGCAACGACCTGTCAGGCAACCAGTTGACACCCTTCCAGGGTCTGCTG 1970
|||| ||||||||||| |||| |||| || ||||||||||||||||| ||
ha00442 1177 GTGGTAACGACCTGTCTGGCAGCCAGCTGGCACCCTTCCAGGGTCTGTTG 1226
365 G N D L S G S Q L A P F Q G L L 380
751 ----+----*----+----*----+----*----+----*----+----* 800
251 Q A V A T T L L H L E L T E C Q L 267
msh04335 1971 CAGGCAGTAGCCACCACACTGCTGCATCTTGAGCTGACTGAGTGCCAGCT 2020
|||||| ||| |||||||| ||||||| |||||||||||||| |||||
ha00442 1227 CAGGCATCAGCAGCCACACTGTTGCATCTGGAGCTGACTGAGTGTCAGCT 1276
381 Q A S A A T L L H L E L T E C Q L 397
801 ----+----*----+----*----+----*----+----*----+----* 850
268 A D A Q L L A T L P T L T R C A S 284
msh04335 2021 TGCTGATGCCCAGCTGTTGGCTACCCTGCCCACCCTCACTCGATGTGCCA 2070
|| || ||||||||||||| || || |||| ||| |||| || ||||
ha00442 1277 CGCAGACACCCAGCTGTTGGCCACACTACCCATCCTGACTCAGTGCGCCA 1326
398 A D T Q L L A T L P I L T Q C A S 414
851 ----+----*----+----*----+----*----+----*----+----* 900
285 L R Y L G L Y G N P L S M A G L 300
msh04335 2071 GTCTCCGCTACCTTGGTCTCTATGGCAACCCTTTGTCTATGGCAGGACTT 2120
||||||| |||||||| |||||||||||||| |||| ||||| || ||
ha00442 1327 GTCTCCGGTACCTTGGCCTCTATGGCAACCCACTGTCCATGGCGGGCCTC 1376
415 L R Y L G L Y G N P L S M A G L 430
901 ----+----*----+----*----+----*----+----*----+----* 950
301 K E L L R D S V V Q A E L R T V V 317
msh04335 2121 AAAGAACTGCTTCGGGACTCTGTGGTACAGGCTGAGCTACGTACCGTGGT 2170
|| || ||||| |||||||| |||| |||||||||||| ||||| |||||
ha00442 1377 AAGGAGCTGCTGCGGGACTCAGTGGCACAGGCTGAGCTGCGTACTGTGGT 1426
431 K E L L R D S V A Q A E L R T V V 447
951 ----+----*----+----*----+----*----+----*----+----* 1000
318 H P F P V D C Y E G L P W P P P A 334
msh04335 2171 ACACCCCTTCCCTGTGGACTGCTATGAGGGTCTTCCTTGGCCACCACCTG 2220
||||||||||||||||||||||||||||| | || ||||| || ||||
ha00442 1427 GCACCCCTTCCCTGTGGACTGCTATGAGGGCTTGCCCTGGCCGCCGCCTG 1476
448 H P F P V D C Y E G L P W P P P A 464
1001 ----+----*----+----*----+----*----+----*----+----* 1050
335 S V L L E A S I N E E K F A R V 350
msh04335 2221 CCTCTGTCCTTCTGGAAGCCTCCATCAATGAGGAGAAGTTTGCCCGGGTG 2270
|||||||||| ||||| ||||||||||||||||||||||||||||| ||
ha00442 1477 CCTCTGTCCTGCTGGAGGCCTCCATCAATGAGGAGAAGTTTGCCCGCGTA 1526
465 S V L L E A S I N E E K F A R V 480
1051 ----+----*----+----*----+----*----+----*----+----* 1100
351 E A E L H Q L L L A S G R A H V L 367
msh04335 2271 GAAGCTGAGTTACACCAACTGCTGTTAGCTTCGGGCCGTGCCCATGTGCT 2320
||||||||||| ||||| ||||| |||| || |||||||||||||||||
ha00442 1527 GAAGCTGAGTTGCACCAGCTGCTTCTAGCCTCAGGCCGTGCCCATGTGCT 1576
481 E A E L H Q L L L A S G R A H V L 497
1101 ----+----*----+----*----+----*----+----*----+----* 1150
368 W T T D I Y G R L A A D Y F S L * 384
msh04335 2321 CTGGACCACAGACATCTATGGCCGGCTAGCTGCAGACTATTTTAGCCTCT 2370
||||||||| |||||||| || || || ||||| ||||| || ||||| |
ha00442 1577 CTGGACCACGGACATCTACGGGCGACTGGCTGCGGACTACTTCAGCCTAT 1626
498 W T T D I Y G R L A A D Y F S L * 514
1151 -- 1152
384 384
msh04335 2371 GA 2372
||
ha00442 1627 GA 1628
514 514
*--[ 3'UTR ]--*
1 ----+----*----+----*----+----*----+----*----+----* 50
msh04335 2373 .................................................. 2373
ha00442 1629 TGAAGTAGCTCTGGGTGAGACACAGGCCGCCCTGCAGTCTCTTTAGGTAG 1678
51 ----+----*----+----*----+----*----+----*----+----* 100
msh04335 2373 ........TCTCCAGGG..TCATAGTGAAGCCTGACACAAAGGCTCT.GT 2411
| | | ||| | | ||| || | |||||| || || ||
ha00442 1679 GCAGGGCCTTTGCTGGGACCCCTGGTGGAGGCCTTCACAAAAGCACTGGT 1728
101 ----+----*----+----*----+----*----+----*----+----* 150
msh04335 2412 CTTAGGTTTTCTGC..AGTTTGCCTTTCTCCTGGGTATACCTTGAGTCAC 2459
||||| |||| || | |||| || ||||| | |||| || | |
ha00442 1729 TACTGGTTTCCTGCTGGGTCTACCTTGCTTCTGGGCACACCTCAAGCCTC 1778
151 ----+----*----+----*----+----*----+----*----+----* 200
msh04335 2460 TTCTGCTTTCTGCAGTACCCTTCACCTGCTCCCAGTATCT.......... 2499
|||||||||||||| ||| | | | || ||
ha00442 1779 CCCTGCTTTCTGCAGTGCCCCACGCGGTTTTCCCTGCACTTGCTCCATAA 1828
201 ----+----*----+----*----+----*----+----*----+----* 250
msh04335 2500 .................GGCAGCCTGTTGCTATCTCAGGCCTGTGCGCCC 2532
||| | | || |||||||| ||
ha00442 1829 TTGGCTGATCATCTGTGGGCCCCGGGGCTGGATGTCAGGCCTCCATTGCC 1878
251 ----+----*----+----*----+----*----+----*----+----* 300
msh04335 2533 CTGTTCTGTTT.GATGTACTTGTTGGCTCTGTTGGGTTGTAGTCTCTCTG 2581
||| || |||| | || | ||| || | | |||| | ||| || ||
ha00442 1879 CTGCTCAGTTTGGCTGCATTTGGCTGCCGTCTGGGGTCCTGGTC.CTTTG 1927
301 ----+----*----+----*----+----*----+----*----+----* 350
msh04335 2582 TAGAAA.....................................ACGCTTC 2594
| ||| ||
ha00442 1928 TGCAAATGCTTTGGGATTCCAGTTGTGAGCTGAGAGAGATGATGGCCTCT 1977
351 ----+----*----+----*----+----*----+----*----+----* 400
msh04335 2595 CTGGACACATCCCATGCCCTAAGCAGGCATGCAGTGC.ACTGAGGTAGAT 2643
|||| | ||| | || | | | |||||| ||| ||| ||
ha00442 1978 CTGGGCCTTTCCTCTCCCTTTACTGAGAGCTCAGTGCTTCTGGGGTTGAA 2027
401 ----+----*----+----*----+----*----+----*----+----* 450
msh04335 2644 GT..CAGGGTGATCTGCTTCAGGGCATTTTGGGGT............... 2676
|| | | | ||||||||||| | | || ||
ha00442 2028 GTTGGACAGAGGCCTGCTTCAGGGAAGCTGGGAGTCCCCAGGCACTCACG 2077
451 ----+----*----+----*----+----*----+----*----+----* 500
msh04335 2677 CTTACATTGTGTACCCTGCCTGGCACCCTA...............TTACC 2711
| | |||| |||| || || || | | |
ha00442 2078 CCTCTTACGTGTTCCCTACCCTGCCACCCAGCCACCCCACTGGGCTGGGC 2127
501 ----+----*----+----*----+----*----+----*----+----* 550
msh04335 2712 TGGCTCTGGAGGGTGTGGATAAGGTACAAACGTGTAGTATCTGGAATGTG 2761
| | |||||||| || |||||||| | ||| |||||| ||
ha00442 2128 TCGGGCTGGAGGGGGTCATCAAGGTACACATGTG.....CCTGGAAGTTG 2172
551 ----+----*----+----*----+----*----+----*----+----* 600
msh04335 2762 AATTTATGGGCTTTTTTGATGTGTGTCCTAATTGG............... 2796
||||| | |||| |||| | | ||||| ||||
ha00442 2173 AATTTGT.GGCTGTTTTTTTTTCTGTCCACGTTGGTCACCCTTATCCTTA 2221
601 ----+----*----+----*----+----*----+----*----+----* 650
msh04335 2797 .................................................. 2797
ha00442 2222 TCTCTGCTGTCACCCCCAACATGGCCACCGGGCAACAACTGCCATCCAGC 2271
651 ----+----*----+----*----+----*----+----*----+----* 700
msh04335 2797 .................................................. 2797
ha00442 2272 CTGTCGCCCCGCCCTTCGCGGGGCAGCCCCGTCGGCACTGCCGGCCAGTC 2321
701 ----+----*----+----*----+----*----+----*----+----* 750
msh04335 2797 .................................................. 2797
ha00442 2322 CTTGCTCTTCCCACCTTTCGGAGGCCCAAGATCCTACTGTGGCCGGCCAG 2371
751 ----+----*----+----*----+----*----+----*----+----* 800
msh04335 2797 .................................................. 2797
ha00442 2372 GGCCAGCGAGGGACCCCCCCCATGCAGAGCTGGAGGTTGGGGTGATGTCT 2421
801 ----+----*----+----*----+----*----+----*----+----* 850
msh04335 2797 .................................................. 2797
ha00442 2422 TTTCGGAAGAGCTTCAAGGGAGGTGTTGGGGCCTCCCCGGCCACCTTCCA 2471
851 ----+----*----+----*----+----*----+----*----+----* 900
msh04335 2797 .................................................. 2797
ha00442 2472 TTGCTACCCCAGGATTCCCGAGTGCAACGTTCCCGGCTCGCGCCCCACAC 2521
901 ----+----*----+----*----+----*----+----*----+----* 950
msh04335 2797 .................................................. 2797
ha00442 2522 ACGGCTCAGCGCACACTGCGCGGCTTCCACCTTTACTGACGGAGCATGCG 2571
951 ----+----*----+----*----+----*----+----*----+----* 1000
msh04335 2797 .................................................. 2797
ha00442 2572 CGAGGCCGCACCGGCCAATCTCCGGCGCCCACGTCATCCGCGCGCCCGCG 2621
1001 ----+----*----+----*----+----*----+----*----+----* 1050
msh04335 2797 .................................................. 2797
ha00442 2622 GCCCTAGCAGTGGATCTCGTAGGCGACCGGCGGGGGCACGCGGAGTCCCG 2671
1051 ----+----*----+----*----+----*----+----*----+----* 1100
msh04335 2797 .................................................. 2797
ha00442 2672 GCCCCGCCCCCTGTTCCGGGCCGCAGTCAGCGGGCGCCTCCGCCGGACCC 2721
1101 ----+----*----+----*----+----*----+----*----+----* 1150
msh04335 2797 .................................................. 2797
ha00442 2722 TCGGCGAAGAGCGGCTTGGAGCGGTTGATGACGAACATCTCGTGGCCGCG 2771
1151 ----+----*----+----*----+----*----+----*----+----* 1200
msh04335 2797 .................................................. 2797
ha00442 2772 CTCGTCGCGGAGCTCCTCTAGCTGTGCGAACGTACAGGGGCCGTCCAAGT 2821
1201 ----+----*----+----*----+----*----+----*----+----* 1250
msh04335 2797 .................................................. 2797
ha00442 2822 AGTCGTTGACGAACAGCGCTCCCTCCCCCGGAGGCCCCCGCGCCTTTTTT 2871
1251 ----+----*----+----*----+----*----+----*----+----* 1300
msh04335 2797 .................................................. 2797
ha00442 2872 CGCCTGCGGCGCCGGCGACAGATCATGGCGACCAGGAGCAGCGCCGTGAG 2921
1301 ----+----*----+----*----+----*----+----*----+----* 1350
msh04335 2797 .................................................. 2797
ha00442 2922 CGCCAGCAGCGCGATGGCCGCCGCAATGGCCGTCTGTGTGGCCACGCCCA 2971
1351 ----+----*----+----*----+----*----+----*----+----* 1400
msh04335 2797 .................................................. 2797
ha00442 2972 GGGCGCGGAAGGCCATGCTGCCCGCCTCGGGCCGGGGCTCGCTGCCGGCG 3021
1401 ----+----*----+----*----+----*----+----*----+----* 1450
msh04335 2797 .................................................. 2797
ha00442 3022 GGGCGGGCGGCCGGAGGCGGCGGTTGCGCGGGCTGCTGCGGCTGCTGCCG 3071
1451 ----+----*----+----*----+----*----+----*----+----* 1500
msh04335 2797 .................................................. 2797
ha00442 3072 GGACGCGTTGACCAGGAGCCGGAAGGGCACGCGGGCAGCGCCGCCGGCGT 3121
1501 ----+----*----+----*----+----*----+----*----+----* 1550
msh04335 2797 .................................................. 2797
ha00442 3122 TGGAGGCCTCGCACTCGTACTTACCGGCGTGCGCCAGCGTGATGTTGCTG 3171
1551 ----+----*----+----*----+----*----+----*----+----* 1600
msh04335 2797 .................................................. 2797
ha00442 3172 AGGAAGAGCATGCCGCTGCCCGTGTCGGATGCCGAGTGTCCGCCCAGGCC 3221
1601 ----+----*----+----*----+----*----+----*----+----* 1650
msh04335 2797 .................................................. 2797
ha00442 3222 CAGCAACCCGCCTTCTAGCTGGGCCTGGGCTCGCGGCCGGCCCTCGCGAG 3271
1651 ----+----*----+----*----+----*----+----*----+----* 1700
msh04335 2797 .................................................. 2797
ha00442 3272 GCTGGGGCACCTTTCTCCAGGTCACCAATGGCTGCGGGTAGCCGGAGGCT 3321
1701 ----+----*----+----*----+----*----+----*----+----* 1750
msh04335 2797 .................................................. 2797
ha00442 3322 TGGCAGGCAACCCGCAGGTCCTCACCCAGGTTGGCTGTGAGCTCCAGCGG 3371
1751 ----+----*----+----*----+----*----+----*----+----* 1800
msh04335 2797 .................................................. 2797
ha00442 3372 CTGCACGTGGACAGAGGGCGGAATGCAGATGAGGCTGCTGTGGGATACGT 3421
1801 ----+----*----+----*----+----*----+----*----+----* 1850
msh04335 2797 .................................................. 2797
ha00442 3422 CCAGGAGACTCTGGAGCGCCAGGCGCGGGGGCTCTGCACACATGATCTTC 3471
1851 ----+----*----+----*----+----*----+----*----+----* 1900
msh04335 2797 .................................................. 2797
ha00442 3472 CTGTCCCTGGAGGTGAGCAGCCGCTGGCCGCCCTCCTTGATCCAGGCCCC 3521
1901 ----+----*----+----*----+----*----+----*----+----* 1950
msh04335 2797 .................................................. 2797
ha00442 3522 CAGCCAGTGCAGGGCGCAGTCACAGCGCCATGGGTTCTCTGTGGGAGAGC 3571
1951 ----+----*----+----*----+----*----+----*----+----* 2000
msh04335 2797 .................................................. 2797
ha00442 3572 AGCGTTAGGCAGGTGGCTTGAGGGTGCTGCTAAAACAGCCTGTGCAGTTG 3621
2001 ----+----*----+----*----+----*----+----*----+----* 2050
msh04335 2797 .................................................. 2797
ha00442 3622 GGGTTTTGCAGGCCAGGACAGAGGCCTCTTTCCCACCTCCCACAGCGTTT 3671
2051 ----+----*----+----*----+----*----+----*----+----* 2100
msh04335 2797 .................................................. 2797
ha00442 3672 TCACACGGAGTCCAAGGCCCTGCCACCCCTTCCTTGACCCCAAGCTCCTT 3721
2101 ----+----*----+----*----+----*----+----*----+----* 2150
msh04335 2797 .................................................. 2797
ha00442 3722 GGGGCGGCAGGCCCTTCACCCTCGCCCCCCTCCCCTTTAGCTCTGTGATG 3771
2151 ----+----*----+----*----+----*----+----*----+----* 2200
msh04335 2797 .................................................. 2797
ha00442 3772 CCTGCCTGTTACAGATCACTTCTCCGTCGGTCTCTGAGAAAGCACCTGCT 3821
2201 ----+----*----+----*----+----*----+----*----+----* 2250
msh04335 2797 .................................................. 2797
ha00442 3822 CCTTAAGTCTTCCTGCAACAAGTGCCACTGTTTTTAGGAACCTGGGCGTC 3871
2251 ----+----*----+----*----+----*----+----*----+----* 2300
msh04335 2797 .................................................. 2797
ha00442 3872 CACATAGACATCTCACCAGCACTGAAACCTCACAAGTCCTCTCAGCTTTG 3921
2301 ----+----*----+----*----+----*----+----*----+----* 2350
msh04335 2797 .................................................. 2797
ha00442 3922 CCTTTGGATGCCCTCTCTTGGGAATGTCCCCAGTCCTGGTCAGCTGTCTC 3971
2351 ----+----*----+----*----+----*----+----*----+----* 2400
msh04335 2797 .................................................. 2797
ha00442 3972 TCTCCTTTGCAATTTTGTCTGCCTCCCCTCAGCCTAAAAGTGTGCAGAAC 4021
2401 ----+----*----+----*----+----*----+----*----+----* 2450
msh04335 2797 .................................................. 2797
ha00442 4022 CCTCAATTCTGTTAAGTCACCCTGTGGAGTTCCTGTCTTCTGTTTTCCCC 4071
2451 ----+----*----+----*----+----*----+----*----+----* 2500
msh04335 2797 .................................................. 2797
ha00442 4072 AGGCAGGGTGCCTGAGCTGTATCCCCCAGCACACCCACTCCCGCAGCCCT 4121
2501 ----+----*----+----*----+----*----+----*----+----* 2550
msh04335 2797 .................................................. 2797
ha00442 4122 CCAGTGTGGCTGCAGGCGGTGGTGCAGCCTTCCAGACTGCTGCCCAGTTG 4171
2551 ----+----*----+----*----+----*----+----*----+----* 2600
msh04335 2797 .................................................. 2797
ha00442 4172 CCTGATGTCAGAGCCCCTCCACACATGAGCCTGCTCCCTACTGCCAACAC 4221
2601 ----+----*----+----*----+----*----+----*----+----* 2650
msh04335 2797 .......................ATGGGAAAGACTTACCTG......... 2814
| | |||| ||||||
ha00442 4222 CGTGGCCCAGACAGAGACGCTTTCCGAGGAAGAGGTACCTGTGAGGCGCA 4271
2651 ----+----*----+----*----+----*----+----*----+----* 2700
msh04335 2815 .................................................. 2815
ha00442 4272 GGACTTGCAGACTGGCCAGGGGCTGCAGGGCCTCTCGGCTGATGGTGCCC 4321
2701 ----+----*----+----*----+----*----+----*----+----* 2750
msh04335 2815 .................................................. 2815
ha00442 4322 AGCTGGTTCCTGCTGAGGTCCAGCAGTGCTAGGGAGGACAGCCCCGCTAG 4371
2751 ----+----*----+----*----+----*----+----*----+----* 2800
msh04335 2815 .................................................. 2815
ha00442 4372 AGCCTGGTCCTCCAGCAGCTCAATGCTGTTTTCTTGCAGGTGAAGCTCCT 4421
2801 ----+----*----+----*----+----*----+----*----+----* 2850
msh04335 2815 .................................................. 2815
ha00442 4422 GCAGTCGCTGAAGTAAGGACAGCAGATCGTGAGGAAAAAGGGCGCCGAGG 4471
2851 ----+----*----+----*----+----*----+----*----+----* 2900
msh04335 2815 .................................................. 2815
ha00442 4472 TTGGGGGCATGTCTCTCTTCTTACCAAGCTAGACTGGGTTGCCTTTTCTA 4521
2901 ----+----*----+----*----+----*----+----*----+----* 2950
msh04335 2815 .................................................. 2815
ha00442 4522 ACTATTCCAGCCCTACAGGGCGAGGGGCCATAATGGAGTATCCCGCCCCT 4571
2951 ----+----*----+----*----+----*----+----*----+----* 3000
msh04335 2815 .................................................. 2815
ha00442 4572 TTAGACCCCAGGCGCTCACCGGCAGGTGCAAGAAGGTGAAATCCAGCAGC 4621
3001 ----+----*----+----*----+----*----+----*----+----* 3050
msh04335 2815 .................................................. 2815
ha00442 4622 CGCGCCAGCTGGTTGCCCGCCAGGTAGAGCACGCGCAGCTGGGCCAGGCC 4671
3051 ----+----*----+----*----+----*----+----*----+----* 3100
msh04335 2815 .................................................. 2815
ha00442 4672 TACGAAGGCGCCGCTGCGCAAGCCGCGCAGCCGGTTGCTAGTGAGCGCCA 4721
3101 ----+----*----+----*----+----*----+----*----+----* 3150
msh04335 2815 .................................................. 2815
ha00442 4722 GCTCCAGCAGGCGCGGCTGCGCGCGGAAGGCGCCGGCCTCCAGGGCGCGC 4771
3151 ----+----*----+----*----+----*----+----*----+----* 3200
msh04335 2815 .................................................. 2815
ha00442 4772 AGGCTGTTGTTGTGCAGGTAGAGCCGGCGCAGAGCGGCGAGTGGCGCCAG 4821
3201 ----+----*----+----*----+----*----+----*----+----* 3250
msh04335 2815 .................................................. 2815
ha00442 4822 GGCTCCCGGCTCTAGGCGGGCGATGTTGTTGTCCTGCAGGAACAGTGTCT 4871
3251 ----+----*----+----*----+----*----+----*----+----* 3300
msh04335 2815 .................................................. 2815
ha00442 4872 GCAGGCCGGGGAAAGAGGAGGCGCTTACCCCGCTGCGGGGGTCTTCCTCT 4921
3301 ----+----*----+----*----+----*----+----*----+----* 3350
msh04335 2815 .................................................. 2815
ha00442 4922 CCCTGGGGGCACCCCGTCCTCCCGCAGCTCCACACGGTGCCCACCTGCGT 4971
3351 ----+----*----+----*----+----*----+----*----+----* 3400
msh04335 2815 .................................................. 2815
ha00442 4972 CCCTGGCGGGATTCCCAGCGGGACGACGCGCAACCGCAGGGCGCCACACT 5021
3401 ----+----*----+----*----+----*----+----*----+----* 3450
msh04335 2815 .................................................. 2815
ha00442 5022 CCACCGTGGCGCTGTAGCAGCGGCAGGCTGCTGGGCAGCCGGCGGCGCGG 5071
3451 ----+----*----+----*----+----*----+----*----+----* 3500
msh04335 2815 .................................................. 2815
ha00442 5072 AGCGGCAGTAGTAGCAGCAGCAGCGGCAGCAGTTCGGGGGCCCTCAGGGC 5121
3501 ----+----*----+----*----+----*----+----*----+----* 3550
msh04335 2815 .................................................. 2815
ha00442 5122 CATCTCCCGAGGCCCGGTTCCTCACCGGCCCTTCCGCGGTTCAGCCGCAG 5171
3551 ----+----*----+----*----+----*----+----*----+----* 3600
msh04335 2815 .................................................. 2815
ha00442 5172 ACGCGTGCCCTCCTGAAACACAGGTTGGCAGGCCAGTCTCGGCAGTCGAG 5221
3601 ----+----*----+----*----+----*----+----*----+----* 3650
msh04335 2815 .................................................. 2815
ha00442 5222 AGCCAGCCAATAGATGGAATGGAGGCCTGCACCTGCGTCTAACTTTTGAC 5271
3651 ----+----*----+----*----+----*----+----*----+----* 3700
msh04335 2815 .........CATTTCAAAAAAAAAAAAAAAAAAC................ 2839
||||| ||| || ||||
ha00442 5272 ACTATAAATAGGTTCAAGAAACTAATAAAACGTTCTGGTTTTCTCCTTTG 5321
3701 -- 3702
msh04335 2839 .. 2839
ha00442 5322 AC 5323