Comparison of KIAA cDNA sequences between mouse and human (KIAA0014)
<<Original sequence data>>
mouse mKIAA0014 (msh04335) length: 2839 bp, CDS: 1041 - 2372
human KIAA0014 (ha00442) length: 5323 bp, CDS: 87 - 1628
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 57 - 1041 223 74 24.9
CDS: 1042 - 2376 1130 202 15.2
3'UTR: 2377 - 6060 286 189 39.8
amino acid
CDS: 1042 - 2376 414 31 7.0
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
msh04335 1 TGGGCGAGGAAGGGTTGCAGGCCTTGGTAGTCGGGGAGGCGGATGAGCGG 50
ha00442 1 .................................................. 1
51 ----+----*----+----*----+----*----+----*----+----* 100
msh04335 51 GGGCCGCGGGGCTGGGATTCGAGTCGAGCTGAGAGTCAAGCAGCCGTTAG 100
||||||||
ha00442 1 ......CGGGGCTG.................................... 8
101 ----+----*----+----*----+----*----+----*----+----* 150
msh04335 101 TGGTCAGGGCACTTGGACGGCAGGTTCGACGGGGACTGGCGCTTGAAGAC 150
ha00442 9 .................................................. 9
151 ----+----*----+----*----+----*----+----*----+----* 200
msh04335 151 CACGGCTGAGGCGGATTCTCGGGAGGTGCCGCCGGCGCGCGGGGATGGGC 200
||||||| || || | | ||||| | |
ha00442 9 .......GAGGCGGTGGCTGCGGTTGCGGGACCGGCACTATG........ 43
201 ----+----*----+----*----+----*----+----*----+----* 250
msh04335 201 CGCAAGCGAAGGGAGACCTAGGGGCGGGCGAGGCCGGTCTCGGCCTGTGG 250
ha00442 44 .................................................. 44
251 ----+----*----+----*----+----*----+----*----+----* 300
msh04335 251 CTCCAGGCTCGCCCGGGTCAGTTGATGTTCCGGGCTTTTTGTTTTCTCCA 300
ha00442 44 .................................................. 44
301 ----+----*----+----*----+----*----+----*----+----* 350
msh04335 301 AGGATCCGAGCGTGCGCGTCTGTATGCCGCAGAGACCGCTGTGTCCTGTG 350
ha00442 44 .................................................. 44
351 ----+----*----+----*----+----*----+----*----+----* 400
msh04335 351 TGCAGTAGCATCACCCAGAAGCAATCCTTGCTTGGAGGCCAGGCGGGCTG 400
ha00442 44 .................................................. 44
401 ----+----*----+----*----+----*----+----*----+----* 450
msh04335 401 CCACCGGTTCCTCTTATGACAGGTGTTTGGTTGGCTTGTCCTGTCAGTTA 450
| || | || || || |||| ||| | | | || |
ha00442 44 ...CTGGGCCTTCCTACCACTTGTGTGTGGCTTGGTAGTGGCCT...... 84
451 ----+----*----+----*----+----*----+----*----+----* 500
msh04335 451 GGCAGTCCTATTATCTTAAGCTAGAGCCAGATCAAGGACAGTCACGCGGG 500
ha00442 85 .................................................. 85
501 ----+----*----+----*----+----*----+----*----+----* 550
msh04335 501 GTTCCCCAGGGACGCGTGCCTTAAGGACTCGTAGGAGATGTTAGAAGCAA 550
ha00442 85 .................................................. 85
551 ----+----*----+----*----+----*----+----*----+----* 600
S F W S P V L S L
msh04335 551 GCAAACCCTGGGCTTCATCAGTCTTTCTGGTCCCCAGTCTTGTCCCTTGC 600
|| | ||| |||| | ||||||
ha00442 85 ...................AGGGTCTCTCCTCCCTGCTGAAGTCCCT... 112
G L S S L L K S L
601 ----+----*----+----*----+----*----+----*----+----* 650
msh04335 601 TGCGGCTTTGCGTAAGGCCTAGGCCCTGGTTTTCCATTCTGTTGTGGGCT 650
ha00442 113 .................................................. 113
651 ----+----*----+----*----+----*----+----*----+----* 700
msh04335 651 GAGGACTGTAGCATAGTTCTGAGGGTAAGGTGTTTTGCCCACAGGAAGTC 700
ha00442 113 .................................................. 113
701 ----+----*----+----*----+----*----+----*----+----* 750
msh04335 701 TACTGACCCAGGATAGCAAGAATCATTCAGGCTCAGGATCTTTTGTATGT 750
ha00442 113 .................................................. 113
751 ----+----*----+----*----+----*----+----*----+----* 800
msh04335 751 GGCTTCTCAGCTGGAACGCTTTAGCAGTTTTGGCTTGGATCGTTATGAAT 800
ha00442 113 .................................................. 113
801 ----+----*----+----*----+----*----+----*----+----* 850
msh04335 801 CTCGTGAATTTAAGACATGGTTTCTCAGTGAAGAGGAGGTACCCGAATAG 850
ha00442 113 .................................................. 113
851 ----+----*----+----*----+----*----+----*----+----* 900
H R G W L S A Q S S T M H
msh04335 851 GAGACAAGGACCACAGAGGGTGGCTGTCTGCCCAGTCCAGCACCATGCAC 900
| | | |||||| |||||||| | ||||||||||||||
ha00442 113 ..........CTCCTGCAGGTGGCCGTCTGCCCGGCCCAGCACCATGCAC 152
S C R W P S A R P S T M H
901 ----+----*----+----*----+----*----+----*----+----* 950
T L V F L S T R Q V L Q C Q P A A
msh04335 901 ACACTTGTGTTCCTCAGCACGCGTCAGGTCCTTCAGTGCCAGCCAGCTGC 950
|| ||||||||| | ||||| || ||||| || |||||||||||||||||
ha00442 153 ACGCTTGTGTTCTTGAGCACACGGCAGGTGCTGCAGTGCCAGCCAGCTGC 202
T L V F L S T R Q V L Q C Q P A A
951 ----+----*----+----*----+----*----+----*----+----* 1000
C Q A L P L L P R E L F P L L F K
msh04335 951 ATGCCAGGCCCTGCCCCTGCTGCCCCGGGAACTCTTCCCTCTGCTCTTCA 1000
||||||||||||||||||||||| || ||||||||||| ||||| ||||
ha00442 203 CTGCCAGGCCCTGCCCCTGCTGCCACGCGAACTCTTCCCCCTGCTGTTCA 252
C Q A L P L L P R E L F P L L F K
1001 ----+----*----+----*----+----*----+----*----+----* 1050
V A F M D K K T L V L R E L V H
msh04335 1001 AGGTGGCCTTCATGGACAAAAAGACGCTTGTGCTGCGTGAGCTGGTGCAC 1050
||||||||||||||||||| ||||| | || ||||| ||| |||| |||
ha00442 253 AGGTGGCCTTCATGGACAAGAAGACAGTGGTACTGCGCGAGTTGGTACAC 302
V A F M D K K T V V L R E L V H
1051 ----+----*----+----*----+----*----+----*----+----* 1100
T W P F P L L S F Q Q L L Q E C A
msh04335 1051 ACGTGGCCCTTTCCCCTGCTCAGCTTCCAGCAGCTGCTGCAGGAGTGTGC 1100
||||||||||| || |||||||| |||||||||||||| |||||||||||
ha00442 303 ACGTGGCCCTTCCCGCTGCTCAGTTTCCAGCAGCTGCTACAGGAGTGTGC 352
T W P F P L L S F Q Q L L Q E C A
1101 ----+----*----+----*----+----*----+----*----+----* 1150
H C S R A L L Q E R L S T E S M Q
msh04335 1101 CCACTGCAGTCGAGCCCTGCTGCAGGAGCGGCTCAGCACAGAAAGCATGC 1150
||||||||| || ||||| ||||||||||||| ||||| || |||||||
ha00442 353 CCACTGCAGCCGTGCCCTCCTGCAGGAGCGGCCTAGCACTGAGAGCATGC 402
H C S R A L L Q E R P S T E S M Q
1151 ----+----*----+----*----+----*----+----*----+----* 1200
A V I L G L T A R I H T Q E T E
msh04335 1151 AGGCTGTGATCCTGGGGCTGACAGCTCGGATTCACACTCAAGAAACAGAG 1200
||||||| |||||||||||||| || ||| | ||||| ||| | | |
ha00442 403 AGGCTGTTATCCTGGGGCTGACTGCCCGGCTCCACACCTCAGAGCCTGGG 452
A V I L G L T A R L H T S E P G
1201 ----+----*----+----*----+----*----+----*----+----* 1250
A G T Q P L C H A L R V L D M
msh04335 1201 GCTGGCACGCAGCCCTTGTGC....AGCATGCATTGCGGGTTCTGGACAT 1246
|| |||| |||||| | ||| ||||||| ||||||| ||||||||
ha00442 453 GCCAGCACACAGCCCCTCTGCAGGAAGCATGCGCTGCGGGTGCTGGACAT 502
A S T Q P L C R K H A L R V L D M
1251 ----+----*----+----*----+----*----+----*----+----* 1300
T G L L D D G V E Q D P E T M S M
msh04335 1247 GACGGGTCTCCTGGATGATGGTGTGGAGCAGGATCCTGAAACCATGAGCA 1296
|||||| ||| |||||||||||||||| |||||||||| ||||||||||
ha00442 503 GACGGGCCTCTTGGATGATGGTGTGGAACAGGATCCTGGCACCATGAGCA 552
T G L L D D G V E Q D P G T M S M
1301 ----+----*----+----*----+----*----+----*----+----* 1350
W D C T A A V A R T C I A Q Q Q
msh04335 1297 TGTGGGACTGTACAGCCGCTGTAGCCAGAACGTGCATTGCCCAGCAGCAG 1346
||||||||||||| || || ||||| | || ||||||||||||||||||
ha00442 553 TGTGGGACTGTACTGCTGCCGTAGCTCGCACATGCATTGCCCAGCAGCAG 602
W D C T A A V A R T C I A Q Q Q
1351 ----+----*----+----*----+----*----+----*----+----* 1400
G G T A E P G L S P V P V E I R V
msh04335 1347 GGTGGGACTGCCGAGCCAGGGCTGTCACCAGTCCCCGTGGAAATCCGAGT 1396
|||||| | || ||||| |||| | || |||||||||| | || ||
ha00442 603 GGTGGGGCCGCAGAGCCTGGGCCAGCCCCCATCCCCGTGGAGGTGCGCGT 652
G G A A E P G P A P I P V E V R V
1401 ----+----*----+----*----+----*----+----*----+----* 1450
D L R V N R A S Y T F L R E A L Q
msh04335 1397 AGACCTTCGGGTAAACCGGGCCTCGTACACATTCCTTCGTGAGGCCCTCC 1446
||||| ||||| ||||||||||| || | ||||| || ||||| ||||
ha00442 653 GGACCTGCGGGTGAACCGGGCCTCCTATGCGTTCCTGCGGGAGGCACTCC 702
D L R V N R A S Y A F L R E A L R
1451 ----+----*----+----*----+----*----+----*----+----* 1500
S S V A S P L R L C C R D L R A
msh04335 1447 AAAGCAGTGTGGCCAGCCCGCTGCGGCTGTGCTGCCGGGACCTGCGGGCT 1496
|||||| |||| ||||||||||||||| ||||||||||||||||| |||
ha00442 703 GAAGCAGCGTGGGCAGCCCGCTGCGGCTCTGCTGCCGGGACCTGCGAGCT 752
S S V G S P L R L C C R D L R A
1501 ----+----*----+----*----+----*----+----*----+----* 1550
E D L P M R N T V A L L Q L L D A
msh04335 1497 GAGGATCTACCCATGCGTAACACTGTGGCCCTGCTACAGCTTTTAGATGC 1546
||||| || |||||||| ||||||||||||||||| |||||| | |||||
ha00442 753 GAGGACCTGCCCATGCGCAACACTGTGGCCCTGCTGCAGCTTCTGGATGC 802
E D L P M R N T V A L L Q L L D A
1551 ----+----*----+----*----+----*----+----*----+----* 1600
G C L R R I D L R F N N L G L R G
msh04335 1547 AGGCTGTCTGCGCCGGATAGACCTGCGCTTCAATAACCTGGGCTTGCGTG 1596
|||||| |||||||| | |||||||||||||| || |||||| |||| |
ha00442 803 AGGCTGCCTGCGCCGCGTGGACCTGCGCTTCAACAATCTGGGCCTGCGCG 852
G C L R R V D L R F N N L G L R G
1601 ----+----*----+----*----+----*----+----*----+----* 1650
L S V I I P H V A R F Q H L A S
msh04335 1597 GCCTGTCTGTCATTATCCCACATGTGGCCCGCTTTCAGCACTTAGCTAGC 1646
|||||||||| || |||||||| ||||||||||| |||||| | || |||
ha00442 853 GCCTGTCTGTGATCATCCCACACGTGGCCCGCTTCCAGCACCTGGCCAGC 902
L S V I I P H V A R F Q H L A S
1651 ----+----*----+----*----+----*----+----*----+----* 1700
L R L H Y V H G D S R Q P S V D G
msh04335 1647 CTGAGGCTGCACTACGTGCATGGGGACTCAAGACAGCCTTCCGTGGACGG 1696
||| |||| ||||| ||||||||||| ||||| ||||| |||||||| ||
ha00442 903 CTGCGGCTCCACTATGTGCATGGGGATTCAAGGCAGCCCTCCGTGGATGG 952
L R L H Y V H G D S R Q P S V D G
1701 ----+----*----+----*----+----*----+----*----+----* 1750
E D N F R Y F L A Q M G R F M C L
msh04335 1697 GGAGGACAACTTTCGCTACTTTCTGGCCCAGATGGGCCGGTTTATGTGTC 1746
||||||||||| |||||||| || |||||||||||||| || | ||||
ha00442 953 CGAGGACAACTTCCGCTACTTCCTTGCCCAGATGGGCCGCTTCACCTGTC 1002
E D N F R Y F L A Q M G R F T C L
1751 ----+----*----+----*----+----*----+----*----+----* 1800
R E L S M G S S L L S G R L D Q
msh04335 1747 TTCGGGAGCTCAGCATGGGGTCTTCTCTCCTTTCAGGCAGGCTGGATCAA 1796
| || |||||||||||||| || |||||||||||||| |||||||| ||
ha00442 1003 TGCGTGAGCTCAGCATGGGCTCCTCTCTCCTTTCAGGGAGGCTGGACCAG 1052
R E L S M G S S L L S G R L D Q
1801 ----+----*----+----*----+----*----+----*----+----* 1850
L L S T L Q R P L E S L E L A F C
msh04335 1797 CTGCTCAGCACCCTGCAGAGGCCCCTGGAAAGCCTAGAACTGGCCTTCTG 1846
|||||||||||||||||||| |||||||| ||||| || ||||||||||
ha00442 1053 CTGCTCAGCACCCTGCAGAGCCCCCTGGAGAGCCTGGAGTTGGCCTTCTG 1102
L L S T L Q S P L E S L E L A F C
1851 ----+----*----+----*----+----*----+----*----+----* 1900
A L L P E D L C F L A Q S S H A A
msh04335 1847 TGCGCTCTTGCCTGAGGACCTATGCTTCCTGGCTCAGAGTTCTCATGCTG 1896
||| || |||||||||||||| |||||||||| | ||| | |||||||
ha00442 1103 TGCTCTGCTGCCTGAGGACCTACGCTTCCTGGCACGGAGCCCACATGCTG 1152
A L L P E D L R F L A R S P H A A
1901 ----+----*----+----*----+----*----+----*----+----* 1950
H L K K L D L S G N D L S G N Q
msh04335 1897 CCCATCTCAAAAAGTTGGATTTGAGTGGCAACGACCTGTCAGGCAACCAG 1946
|||| ||||| |||||||| ||||||| ||||||||||| |||| ||||
ha00442 1153 CCCACCTCAAGAAGTTGGACCTGAGTGGTAACGACCTGTCTGGCAGCCAG 1202
H L K K L D L S G N D L S G S Q
1951 ----+----*----+----*----+----*----+----*----+----* 2000
L T P F Q G L L Q A V A T T L L H
msh04335 1947 TTGACACCCTTCCAGGGTCTGCTGCAGGCAGTAGCCACCACACTGCTGCA 1996
|| ||||||||||||||||| |||||||| ||| |||||||| ||||
ha00442 1203 CTGGCACCCTTCCAGGGTCTGTTGCAGGCATCAGCAGCCACACTGTTGCA 1252
L A P F Q G L L Q A S A A T L L H
2001 ----+----*----+----*----+----*----+----*----+----* 2050
L E L T E C Q L A D A Q L L A T L
msh04335 1997 TCTTGAGCTGACTGAGTGCCAGCTTGCTGATGCCCAGCTGTTGGCTACCC 2046
||| |||||||||||||| ||||| || || ||||||||||||| || |
ha00442 1253 TCTGGAGCTGACTGAGTGTCAGCTCGCAGACACCCAGCTGTTGGCCACAC 1302
L E L T E C Q L A D T Q L L A T L
2051 ----+----*----+----*----+----*----+----*----+----* 2100
P T L T R C A S L R Y L G L Y G
msh04335 2047 TGCCCACCCTCACTCGATGTGCCAGTCTCCGCTACCTTGGTCTCTATGGC 2096
| |||| ||| |||| || ||||||||||| |||||||| |||||||||
ha00442 1303 TACCCATCCTGACTCAGTGCGCCAGTCTCCGGTACCTTGGCCTCTATGGC 1352
P I L T Q C A S L R Y L G L Y G
2101 ----+----*----+----*----+----*----+----*----+----* 2150
N P L S M A G L K E L L R D S V V
msh04335 2097 AACCCTTTGTCTATGGCAGGACTTAAAGAACTGCTTCGGGACTCTGTGGT 2146
||||| |||| ||||| || || || || ||||| |||||||| ||||
ha00442 1353 AACCCACTGTCCATGGCGGGCCTCAAGGAGCTGCTGCGGGACTCAGTGGC 1402
N P L S M A G L K E L L R D S V A
2151 ----+----*----+----*----+----*----+----*----+----* 2200
Q A E L R T V V H P F P V D C Y E
msh04335 2147 ACAGGCTGAGCTACGTACCGTGGTACACCCCTTCCCTGTGGACTGCTATG 2196
|||||||||||| ||||| ||||| |||||||||||||||||||||||||
ha00442 1403 ACAGGCTGAGCTGCGTACTGTGGTGCACCCCTTCCCTGTGGACTGCTATG 1452
Q A E L R T V V H P F P V D C Y E
2201 ----+----*----+----*----+----*----+----*----+----* 2250
G L P W P P P A S V L L E A S I
msh04335 2197 AGGGTCTTCCTTGGCCACCACCTGCCTCTGTCCTTCTGGAAGCCTCCATC 2246
|||| | || ||||| || |||||||||||||| ||||| |||||||||
ha00442 1453 AGGGCTTGCCCTGGCCGCCGCCTGCCTCTGTCCTGCTGGAGGCCTCCATC 1502
G L P W P P P A S V L L E A S I
2251 ----+----*----+----*----+----*----+----*----+----* 2300
N E E K F A R V E A E L H Q L L L
msh04335 2247 AATGAGGAGAAGTTTGCCCGGGTGGAAGCTGAGTTACACCAACTGCTGTT 2296
|||||||||||||||||||| || ||||||||||| ||||| ||||| |
ha00442 1503 AATGAGGAGAAGTTTGCCCGCGTAGAAGCTGAGTTGCACCAGCTGCTTCT 1552
N E E K F A R V E A E L H Q L L L
2301 ----+----*----+----*----+----*----+----*----+----* 2350
A S G R A H V L W T T D I Y G R L
msh04335 2297 AGCTTCGGGCCGTGCCCATGTGCTCTGGACCACAGACATCTATGGCCGGC 2346
||| || |||||||||||||||||||||||||| |||||||| || || |
ha00442 1553 AGCCTCAGGCCGTGCCCATGTGCTCTGGACCACGGACATCTACGGGCGAC 1602
A S G R A H V L W T T D I Y G R L
2351 ----+----*----+----*----+----*----+----*----+----* 2400
A A D Y F S L *
msh04335 2347 TAGCTGCAGACTATTTTAGCCTCTGATCTCCAGGGT.............. 2382
| ||||| ||||| || ||||| |||| | |
ha00442 1603 TGGCTGCGGACTACTTCAGCCTATGATGAAGTAGCTCTGGGTGAGACACA 1652
A A D Y F S L *
2401 ----+----*----+----*----+----*----+----*----+----* 2450
msh04335 2383 ..............................................CATA 2386
| |
ha00442 1653 GGCCGCCCTGCAGTCTCTTTAGGTAGGCAGGGCCTTTGCTGGGACCCCTG 1702
2451 ----+----*----+----*----+----*----+----*----+----* 2500
msh04335 2387 GTGAAGCCTGACACAAAGGCTCT.GTCTTAGGTTTTCTGC..AGTTTGCC 2433
||| || | |||||| || || || ||||| |||| || | ||
ha00442 1703 GTGGAGGCCTTCACAAAAGCACTGGTTACTGGTTTCCTGCTGGGTCTACC 1752
2501 ----+----*----+----*----+----*----+----*----+----* 2550
msh04335 2434 TTTCTCCTGGGTATACCTTGAGTCACTTCTGCTTTCTGCAGTACCCTTCA 2483
|| || ||||| | |||| || | | |||||||||||||| ||| |
ha00442 1753 TTGCTTCTGGGCACACCTCAAGCCTCCCCTGCTTTCTGCAGTGCCCCACG 1802
2551 ----+----*----+----*----+----*----+----*----+----* 2600
msh04335 2484 CCTGCTCCCAGTATCT...........................GGCAGCC 2506
| | || || ||| |
ha00442 1803 CGGTTTTCCCTGCACTTGCTCCATAATTGGCTGATCATCTGTGGGCCCCG 1852
2601 ----+----*----+----*----+----*----+----*----+----* 2650
msh04335 2507 TGTTGCTATCTCAGGCCTGTGCGCCCCTGTTCTGTTT.GATGTACTTGTT 2555
| || |||||||| ||||| || |||| | || | |||
ha00442 1853 GGGCTGGATGTCAGGCCTCCATTGCCCTGCTCAGTTTGGCTGCATTTGGC 1902
2651 ----+----*----+----*----+----*----+----*----+----* 2700
msh04335 2556 GGCTCTGTTGGGTTGTAGTCTCTCTGTAGAAA.................. 2587
|| | | |||| | ||| || ||| |||
ha00442 1903 TGCCGTCTGGGGTCCTGGTC.CTTTGTGCAAATGCTTTGGGATTCCAGTT 1951
2701 ----+----*----+----*----+----*----+----*----+----* 2750
msh04335 2588 ...................ACGCTTCCTGGACACATCCCATGCCCTAAGC 2618
|| |||| | ||| | || | |
ha00442 1952 GTGAGCTGAGAGAGATGATGGCCTCTCTGGGCCTTTCCTCTCCCTTTACT 2001
2751 ----+----*----+----*----+----*----+----*----+----* 2800
msh04335 2619 AGGCATGCAGTGC.ACTGAGGTAGATGT..CAGGGTGATCTGCTTCAGGG 2665
| |||||| ||| ||| || || | | | |||||||||||
ha00442 2002 GAGAGCTCAGTGCTTCTGGGGTTGAAGTTGGACAGAGGCCTGCTTCAGGG 2051
2801 ----+----*----+----*----+----*----+----*----+----* 2850
msh04335 2666 CATTTTGGGGT...............CTTACATTGTGTACCCTGCCTGGC 2700
| | || || | | |||| |||| || ||
ha00442 2052 AAGCTGGGAGTCCCCAGGCACTCACGCCTCTTACGTGTTCCCTACCCTGC 2101
2851 ----+----*----+----*----+----*----+----*----+----* 2900
msh04335 2701 ACCCTA...............TTACCTGGCTCTGGAGGGTGTGGATAAGG 2735
|| | | || | |||||||| || ||||
ha00442 2102 CACCCAGCCACCCCACTGGGCTGGGCTCGGGCTGGAGGGGGTCATCAAGG 2151
2901 ----+----*----+----*----+----*----+----*----+----* 2950
msh04335 2736 TACAAACGTGTAGTATCTGGAATGTGAATTTATGGGCTTTTTTGATGTGT 2785
|||| | ||| |||||| ||||||| | |||| |||| | | |
ha00442 2152 TACACATGTG.....CCTGGAAGTTGAATTTGT.GGCTGTTTTTTTTTCT 2195
2951 ----+----*----+----*----+----*----+----*----+----* 3000
msh04335 2786 GTCCTAATTGG....................................... 2796
|||| ||||
ha00442 2196 GTCCACGTTGGTCACCCTTATCCTTATCTCTGCTGTCACCCCCAACATGG 2245
3001 ----+----*----+----*----+----*----+----*----+----* 3050
msh04335 2797 .................................................. 2797
ha00442 2246 CCACCGGGCAACAACTGCCATCCAGCCTGTCGCCCCGCCCTTCGCGGGGC 2295
3051 ----+----*----+----*----+----*----+----*----+----* 3100
msh04335 2797 .................................................. 2797
ha00442 2296 AGCCCCGTCGGCACTGCCGGCCAGTCCTTGCTCTTCCCACCTTTCGGAGG 2345
3101 ----+----*----+----*----+----*----+----*----+----* 3150
msh04335 2797 .................................................. 2797
ha00442 2346 CCCAAGATCCTACTGTGGCCGGCCAGGGCCAGCGAGGGACCCCCCCCATG 2395
3151 ----+----*----+----*----+----*----+----*----+----* 3200
msh04335 2797 .................................................. 2797
ha00442 2396 CAGAGCTGGAGGTTGGGGTGATGTCTTTTCGGAAGAGCTTCAAGGGAGGT 2445
3201 ----+----*----+----*----+----*----+----*----+----* 3250
msh04335 2797 .................................................. 2797
ha00442 2446 GTTGGGGCCTCCCCGGCCACCTTCCATTGCTACCCCAGGATTCCCGAGTG 2495
3251 ----+----*----+----*----+----*----+----*----+----* 3300
msh04335 2797 .................................................. 2797
ha00442 2496 CAACGTTCCCGGCTCGCGCCCCACACACGGCTCAGCGCACACTGCGCGGC 2545
3301 ----+----*----+----*----+----*----+----*----+----* 3350
msh04335 2797 .................................................. 2797
ha00442 2546 TTCCACCTTTACTGACGGAGCATGCGCGAGGCCGCACCGGCCAATCTCCG 2595
3351 ----+----*----+----*----+----*----+----*----+----* 3400
msh04335 2797 .................................................. 2797
ha00442 2596 GCGCCCACGTCATCCGCGCGCCCGCGGCCCTAGCAGTGGATCTCGTAGGC 2645
3401 ----+----*----+----*----+----*----+----*----+----* 3450
msh04335 2797 .................................................. 2797
ha00442 2646 GACCGGCGGGGGCACGCGGAGTCCCGGCCCCGCCCCCTGTTCCGGGCCGC 2695
3451 ----+----*----+----*----+----*----+----*----+----* 3500
msh04335 2797 .................................................. 2797
ha00442 2696 AGTCAGCGGGCGCCTCCGCCGGACCCTCGGCGAAGAGCGGCTTGGAGCGG 2745
3501 ----+----*----+----*----+----*----+----*----+----* 3550
msh04335 2797 .................................................. 2797
ha00442 2746 TTGATGACGAACATCTCGTGGCCGCGCTCGTCGCGGAGCTCCTCTAGCTG 2795
3551 ----+----*----+----*----+----*----+----*----+----* 3600
msh04335 2797 .................................................. 2797
ha00442 2796 TGCGAACGTACAGGGGCCGTCCAAGTAGTCGTTGACGAACAGCGCTCCCT 2845
3601 ----+----*----+----*----+----*----+----*----+----* 3650
msh04335 2797 .................................................. 2797
ha00442 2846 CCCCCGGAGGCCCCCGCGCCTTTTTTCGCCTGCGGCGCCGGCGACAGATC 2895
3651 ----+----*----+----*----+----*----+----*----+----* 3700
msh04335 2797 .................................................. 2797
ha00442 2896 ATGGCGACCAGGAGCAGCGCCGTGAGCGCCAGCAGCGCGATGGCCGCCGC 2945
3701 ----+----*----+----*----+----*----+----*----+----* 3750
msh04335 2797 .................................................. 2797
ha00442 2946 AATGGCCGTCTGTGTGGCCACGCCCAGGGCGCGGAAGGCCATGCTGCCCG 2995
3751 ----+----*----+----*----+----*----+----*----+----* 3800
msh04335 2797 .................................................. 2797
ha00442 2996 CCTCGGGCCGGGGCTCGCTGCCGGCGGGGCGGGCGGCCGGAGGCGGCGGT 3045
3801 ----+----*----+----*----+----*----+----*----+----* 3850
msh04335 2797 .................................................. 2797
ha00442 3046 TGCGCGGGCTGCTGCGGCTGCTGCCGGGACGCGTTGACCAGGAGCCGGAA 3095
3851 ----+----*----+----*----+----*----+----*----+----* 3900
msh04335 2797 .................................................. 2797
ha00442 3096 GGGCACGCGGGCAGCGCCGCCGGCGTTGGAGGCCTCGCACTCGTACTTAC 3145
3901 ----+----*----+----*----+----*----+----*----+----* 3950
msh04335 2797 .................................................. 2797
ha00442 3146 CGGCGTGCGCCAGCGTGATGTTGCTGAGGAAGAGCATGCCGCTGCCCGTG 3195
3951 ----+----*----+----*----+----*----+----*----+----* 4000
msh04335 2797 .................................................. 2797
ha00442 3196 TCGGATGCCGAGTGTCCGCCCAGGCCCAGCAACCCGCCTTCTAGCTGGGC 3245
4001 ----+----*----+----*----+----*----+----*----+----* 4050
msh04335 2797 .................................................. 2797
ha00442 3246 CTGGGCTCGCGGCCGGCCCTCGCGAGGCTGGGGCACCTTTCTCCAGGTCA 3295
4051 ----+----*----+----*----+----*----+----*----+----* 4100
msh04335 2797 .................................................. 2797
ha00442 3296 CCAATGGCTGCGGGTAGCCGGAGGCTTGGCAGGCAACCCGCAGGTCCTCA 3345
4101 ----+----*----+----*----+----*----+----*----+----* 4150
msh04335 2797 .................................................. 2797
ha00442 3346 CCCAGGTTGGCTGTGAGCTCCAGCGGCTGCACGTGGACAGAGGGCGGAAT 3395
4151 ----+----*----+----*----+----*----+----*----+----* 4200
msh04335 2797 .................................................. 2797
ha00442 3396 GCAGATGAGGCTGCTGTGGGATACGTCCAGGAGACTCTGGAGCGCCAGGC 3445
4201 ----+----*----+----*----+----*----+----*----+----* 4250
msh04335 2797 .................................................. 2797
ha00442 3446 GCGGGGGCTCTGCACACATGATCTTCCTGTCCCTGGAGGTGAGCAGCCGC 3495
4251 ----+----*----+----*----+----*----+----*----+----* 4300
msh04335 2797 .................................................. 2797
ha00442 3496 TGGCCGCCCTCCTTGATCCAGGCCCCCAGCCAGTGCAGGGCGCAGTCACA 3545
4301 ----+----*----+----*----+----*----+----*----+----* 4350
msh04335 2797 .................................................. 2797
ha00442 3546 GCGCCATGGGTTCTCTGTGGGAGAGCAGCGTTAGGCAGGTGGCTTGAGGG 3595
4351 ----+----*----+----*----+----*----+----*----+----* 4400
msh04335 2797 .................................................. 2797
ha00442 3596 TGCTGCTAAAACAGCCTGTGCAGTTGGGGTTTTGCAGGCCAGGACAGAGG 3645
4401 ----+----*----+----*----+----*----+----*----+----* 4450
msh04335 2797 .................................................. 2797
ha00442 3646 CCTCTTTCCCACCTCCCACAGCGTTTTCACACGGAGTCCAAGGCCCTGCC 3695
4451 ----+----*----+----*----+----*----+----*----+----* 4500
msh04335 2797 .................................................. 2797
ha00442 3696 ACCCCTTCCTTGACCCCAAGCTCCTTGGGGCGGCAGGCCCTTCACCCTCG 3745
4501 ----+----*----+----*----+----*----+----*----+----* 4550
msh04335 2797 .................................................. 2797
ha00442 3746 CCCCCCTCCCCTTTAGCTCTGTGATGCCTGCCTGTTACAGATCACTTCTC 3795
4551 ----+----*----+----*----+----*----+----*----+----* 4600
msh04335 2797 .................................................. 2797
ha00442 3796 CGTCGGTCTCTGAGAAAGCACCTGCTCCTTAAGTCTTCCTGCAACAAGTG 3845
4601 ----+----*----+----*----+----*----+----*----+----* 4650
msh04335 2797 .................................................. 2797
ha00442 3846 CCACTGTTTTTAGGAACCTGGGCGTCCACATAGACATCTCACCAGCACTG 3895
4651 ----+----*----+----*----+----*----+----*----+----* 4700
msh04335 2797 .................................................. 2797
ha00442 3896 AAACCTCACAAGTCCTCTCAGCTTTGCCTTTGGATGCCCTCTCTTGGGAA 3945
4701 ----+----*----+----*----+----*----+----*----+----* 4750
msh04335 2797 .................................................. 2797
ha00442 3946 TGTCCCCAGTCCTGGTCAGCTGTCTCTCTCCTTTGCAATTTTGTCTGCCT 3995
4751 ----+----*----+----*----+----*----+----*----+----* 4800
msh04335 2797 .................................................. 2797
ha00442 3996 CCCCTCAGCCTAAAAGTGTGCAGAACCCTCAATTCTGTTAAGTCACCCTG 4045
4801 ----+----*----+----*----+----*----+----*----+----* 4850
msh04335 2797 .................................................. 2797
ha00442 4046 TGGAGTTCCTGTCTTCTGTTTTCCCCAGGCAGGGTGCCTGAGCTGTATCC 4095
4851 ----+----*----+----*----+----*----+----*----+----* 4900
msh04335 2797 .................................................. 2797
ha00442 4096 CCCAGCACACCCACTCCCGCAGCCCTCCAGTGTGGCTGCAGGCGGTGGTG 4145
4901 ----+----*----+----*----+----*----+----*----+----* 4950
msh04335 2797 .................................................. 2797
ha00442 4146 CAGCCTTCCAGACTGCTGCCCAGTTGCCTGATGTCAGAGCCCCTCCACAC 4195
4951 ----+----*----+----*----+----*----+----*----+----* 5000
msh04335 2797 .................................................A 2797
ha00442 4196 ATGAGCCTGCTCCCTACTGCCAACACCGTGGCCCAGACAGAGACGCTTTC 4245
5001 ----+----*----+----*----+----*----+----*----+----* 5050
msh04335 2798 TGGGAAAGACTTACCTG................................. 2814
| | |||| ||||||
ha00442 4246 CGAGGAAGAGGTACCTGTGAGGCGCAGGACTTGCAGACTGGCCAGGGGCT 4295
5051 ----+----*----+----*----+----*----+----*----+----* 5100
msh04335 2815 .................................................. 2815
ha00442 4296 GCAGGGCCTCTCGGCTGATGGTGCCCAGCTGGTTCCTGCTGAGGTCCAGC 4345
5101 ----+----*----+----*----+----*----+----*----+----* 5150
msh04335 2815 .................................................. 2815
ha00442 4346 AGTGCTAGGGAGGACAGCCCCGCTAGAGCCTGGTCCTCCAGCAGCTCAAT 4395
5151 ----+----*----+----*----+----*----+----*----+----* 5200
msh04335 2815 .................................................. 2815
ha00442 4396 GCTGTTTTCTTGCAGGTGAAGCTCCTGCAGTCGCTGAAGTAAGGACAGCA 4445
5201 ----+----*----+----*----+----*----+----*----+----* 5250
msh04335 2815 .................................................. 2815
ha00442 4446 GATCGTGAGGAAAAAGGGCGCCGAGGTTGGGGGCATGTCTCTCTTCTTAC 4495
5251 ----+----*----+----*----+----*----+----*----+----* 5300
msh04335 2815 .................................................. 2815
ha00442 4496 CAAGCTAGACTGGGTTGCCTTTTCTAACTATTCCAGCCCTACAGGGCGAG 4545
5301 ----+----*----+----*----+----*----+----*----+----* 5350
msh04335 2815 .................................................. 2815
ha00442 4546 GGGCCATAATGGAGTATCCCGCCCCTTTAGACCCCAGGCGCTCACCGGCA 4595
5351 ----+----*----+----*----+----*----+----*----+----* 5400
msh04335 2815 .................................................. 2815
ha00442 4596 GGTGCAAGAAGGTGAAATCCAGCAGCCGCGCCAGCTGGTTGCCCGCCAGG 4645
5401 ----+----*----+----*----+----*----+----*----+----* 5450
msh04335 2815 .................................................. 2815
ha00442 4646 TAGAGCACGCGCAGCTGGGCCAGGCCTACGAAGGCGCCGCTGCGCAAGCC 4695
5451 ----+----*----+----*----+----*----+----*----+----* 5500
msh04335 2815 .................................................. 2815
ha00442 4696 GCGCAGCCGGTTGCTAGTGAGCGCCAGCTCCAGCAGGCGCGGCTGCGCGC 4745
5501 ----+----*----+----*----+----*----+----*----+----* 5550
msh04335 2815 .................................................. 2815
ha00442 4746 GGAAGGCGCCGGCCTCCAGGGCGCGCAGGCTGTTGTTGTGCAGGTAGAGC 4795
5551 ----+----*----+----*----+----*----+----*----+----* 5600
msh04335 2815 .................................................. 2815
ha00442 4796 CGGCGCAGAGCGGCGAGTGGCGCCAGGGCTCCCGGCTCTAGGCGGGCGAT 4845
5601 ----+----*----+----*----+----*----+----*----+----* 5650
msh04335 2815 .................................................. 2815
ha00442 4846 GTTGTTGTCCTGCAGGAACAGTGTCTGCAGGCCGGGGAAAGAGGAGGCGC 4895
5651 ----+----*----+----*----+----*----+----*----+----* 5700
msh04335 2815 .................................................. 2815
ha00442 4896 TTACCCCGCTGCGGGGGTCTTCCTCTCCCTGGGGGCACCCCGTCCTCCCG 4945
5701 ----+----*----+----*----+----*----+----*----+----* 5750
msh04335 2815 .................................................. 2815
ha00442 4946 CAGCTCCACACGGTGCCCACCTGCGTCCCTGGCGGGATTCCCAGCGGGAC 4995
5751 ----+----*----+----*----+----*----+----*----+----* 5800
msh04335 2815 .................................................. 2815
ha00442 4996 GACGCGCAACCGCAGGGCGCCACACTCCACCGTGGCGCTGTAGCAGCGGC 5045
5801 ----+----*----+----*----+----*----+----*----+----* 5850
msh04335 2815 .................................................. 2815
ha00442 5046 AGGCTGCTGGGCAGCCGGCGGCGCGGAGCGGCAGTAGTAGCAGCAGCAGC 5095
5851 ----+----*----+----*----+----*----+----*----+----* 5900
msh04335 2815 .................................................. 2815
ha00442 5096 GGCAGCAGTTCGGGGGCCCTCAGGGCCATCTCCCGAGGCCCGGTTCCTCA 5145
5901 ----+----*----+----*----+----*----+----*----+----* 5950
msh04335 2815 .................................................. 2815
ha00442 5146 CCGGCCCTTCCGCGGTTCAGCCGCAGACGCGTGCCCTCCTGAAACACAGG 5195
5951 ----+----*----+----*----+----*----+----*----+----* 6000
msh04335 2815 .................................................. 2815
ha00442 5196 TTGGCAGGCCAGTCTCGGCAGTCGAGAGCCAGCCAATAGATGGAATGGAG 5245
6001 ----+----*----+----*----+----*----+----*----+----* 6050
msh04335 2815 ...................................CATTTCAAAAAAAAA 2829
||||| ||| |
ha00442 5246 GCCTGCACCTGCGTCTAACTTTTGACACTATAAATAGGTTCAAGAAACTA 5295
6051 ----+----*----+----*----+--- 6078
msh04335 2830 AAAAAAAAAC.................. 2839
| ||||
ha00442 5296 ATAAAACGTTCTGGTTTTCTCCTTTGAC 5323