Comparison of KIAA cDNA sequences between mouse and human (FLJ00293)
<<Original sequence data>>
mouse mFLJ00293 (msh04332) length: 3197 bp, CDS: 2 - 3070
human (sh03709) length: 5391 bp, CDS: 2880 - 5318
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 178 - 2879 325 321 49.7
CDS: 2880 - 5318 2081 358 14.7
3'UTR: 5319 - 5437 41 35 46.1
amino acid
CDS: 2880 - 5318 728 85 10.5
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
msh04332 1 .................................................. 1
sh03709 1 GCTTGTGACCCTTCCATCACTACCCCAATTCCCCCTCTCTGCCCACTCAA 50
51 ----+----*----+----*----+----*----+----*----+----* 100
msh04332 1 .................................................. 1
sh03709 51 CCCCACCTAGCCCATCGTCCTCACTCCCCACCACACTCACCCCAACCAGT 100
101 ----+----*----+----*----+----*----+----*----+----* 150
msh04332 1 .................................................. 1
sh03709 101 ACCCCACACCCCACAAACAAGAGGGTGTGACTTGCAGGGAACAAAAGCAG 150
151 ----+----*----+----*----+----*----+----*----+----* 200
msh04332 1 ...........................TGCAGTGGGCAGGATGGAGGACG 23
| | |||| ||| |
sh03709 151 GATGTCCCCTTTATCTGAGACACCTCCAGATGAGGGCTCTCTGGGACCCA 200
201 ----+----*----+----*----+----*----+----*----+----* 250
msh04332 24 AAGAAGGCCCTGAGTATGGGAAAC.......................... 47
| | | ||| | | || |
sh03709 201 TAAGTGTCTCTGTGAACAATAAGCTCCCCACGAGGTGGGCTTCCCCTGGG 250
251 ----+----*----+----*----+----*----+----*----+----* 300
msh04332 48 ......................................CAGACTTCGTGC 59
| || | ||||
sh03709 251 ATTACAGGCAGTGTCTCTAGTGGTATCAGAGCTCAACACTGAAGTGGTGC 300
301 ----+----*----+----*----+----*----+----*----+----* 350
msh04332 60 TTTTGGATCAACTGACCATG.....GAGGACTTCATGAAGAACCTAGAGC 104
| ||| || | | || ||| || || ||| | ||
sh03709 301 TCCTGGGGACACGGGCATTGACTCTGAGCACCTCTGTGAGATAGGCGCGC 350
351 ----+----*----+----*----+----*----+----*----+----* 400
msh04332 105 TCAGG............................................. 109
||||
sh03709 351 CCAGGGACTGTCTCCACAAGCTTTGACACCCCACTGAGGTGGGAGCTCCC 400
401 ----+----*----+----*----+----*----+----*----+----* 450
msh04332 110 .................................................. 110
sh03709 401 TAGAAACAAACAGTGTCTCTGCAGTCTCAGAGCTTGACACTGAAGTGGAG 450
451 ----+----*----+----*----+----*----+----*----+----* 500
msh04332 110 .................................................. 110
sh03709 451 CTCCCTGGCACGCCAGCGGTGTGTTTGCAAACTGTGGCCTGCCCACTGTG 500
501 ----+----*----+----*----+----*----+----*----+----* 550
msh04332 110 .................................................. 110
sh03709 501 TCCTCTGGTTCACAGACAGTGTTTCCACAGACTCCGAACTCCCCCACTGA 550
551 ----+----*----+----*----+----*----+----*----+----* 600
msh04332 110 .............TTTGAGAAGGGCCGTATCTAT................ 130
| ||| | || || ||| |
sh03709 551 ACTGGGAGCACCCTATGACTGGAGCAGTGTCTCTAGGGACTTGGAGCTCC 600
601 ----+----*----+----*----+----*----+----*----+----* 650
msh04332 131 .................................................. 131
sh03709 601 CCACTGAGTTAGGAGTTCCCTGCAGCACAGACATGGTCCCCACCAACTCT 650
651 ----+----*----+----*----+----*----+----*----+----* 700
msh04332 131 .................................................. 131
sh03709 651 CAGCTCCCCAGTGCAGTGGGAGCTCCCTGGAACACAGCAGTTTCTCCCTG 700
701 ----+----*----+----*----+----*----+----*----+----* 750
msh04332 131 .................................................. 131
sh03709 701 GTACACAGGCGGTGTTTCCATGGATTCTGAGCTCTTTACTGAGGTGGGAG 750
751 ----+----*----+----*----+----*----+----*----+----* 800
msh04332 131 .................................................. 131
sh03709 751 CTCCCTGAGACAAGCACAGTGTCTCACAGACTCTGTGCTCCCCATGAGAC 800
801 ----+----*----+----*----+----*----+----*----+----* 850
msh04332 131 .................................................. 131
sh03709 801 AGGAGCTCCCTGGGTAGCGGGCAGGGTCTCCAGGTTCTATGAACCGCCCG 850
851 ----+----*----+----*----+----*----+----*----+----* 900
msh04332 131 ................................................AC 132
|
sh03709 851 CTGAGGTGGGAGCCTCCTGGAATGCAAGGAGTGCCTTTAAGGACTCTGAG 900
901 ----+----*----+----*----+----*----+----*----+----* 950
msh04332 133 CTACATTGGTGAGGTGCTC............................... 151
|| | ||||| |||||||
sh03709 901 CTTCCATGGTGTGGTGCTCCCTGGGACACGGCAGTGTCTTCATGACTCTG 950
951 ----+----*----+----*----+----*----+----*----+----* 1000
msh04332 152 .................................................. 152
sh03709 951 ACTTCCCACTGAAGTCACACTCTCTGGGACACAGCAGTGTCTGTAAGGAC 1000
1001 ----+----*----+----*----+----*----+----*----+----* 1050
msh04332 152 .................................................. 152
sh03709 1001 TCTGAACTCCACTGAGGTGGGAGCCCCCTGGGCTGTCTTTCCAGTGAGTC 1050
1051 ----+----*----+----*----+----*----+----*----+----* 1100
msh04332 152 ....................................GTATCCGTGAACCC 165
|| || ||| || |
sh03709 1051 TGCGCTGAGGTGGGAGCTCACTGGGAAACCAGTAGTGTCTCTGTGGACTC 1100
1101 ----+----*----+----*----+----*----+----*----+----* 1150
msh04332 166 CTACCAGGAACTGCCATTGTATGGGCCAGAGGCCAT.........TGCCA 206
||| | || | | || ||| | | | |
sh03709 1101 TGACCTTTATTTGAGGTAAAAGCTCCCTGAGACACTGGCAGTGTCTCCAC 1150
1151 ----+----*----+----*----+----*----+----*----+----* 1200
msh04332 207 AGTACCAGGGCCGCGAGCTCTATGAGCGACCACCTCATCTTTACGCCGTG 256
|| | | ||| | || | || | | | |||
sh03709 1151 AGACTCTGAGCCTCCCCCTGCTGGGAGCCCCTGGGAACACAGAGGGCGTC 1200
1201 ----+----*----+----*----+----*----+----*----+----* 1250
msh04332 257 GCCAATGCTGCTTACAAGGCAATGAAGCGCAGAT.CCAGGGACACCTGCA 305
||| | || | || |||| | || | || ||||| || |||
sh03709 1201 TCCACAGACTCTGAGCTCTCACTGAAATGAAGCTCCCTGGGACTCCGGCA 1250
1251 ----+----*----+----*----+----*----+----*----+----* 1300
msh04332 306 TCGTCATCTCA....................................... 316
|| | ||
sh03709 1251 GGATCTCCACAGACTCTTACCTCCCCACTGAAATGGGAGATTTTGGGACA 1300
1301 ----+----*----+----*----+----*----+----*----+----* 1350
msh04332 317 .................................................. 317
sh03709 1301 TGGGCAGGGTCTCCATGGACTCAGAGTTCCCCCATTGAAGGGGGAGTTCG 1350
1351 ----+----*----+----*----+----*----+----*----+----* 1400
msh04332 317 .................................................. 317
sh03709 1351 GTGGCACATGGGCATTGTCTCTAATGACTCTGAGCTCCTGGCTGAGGGGA 1400
1401 ----+----*----+----*----+----*----+----*----+----* 1450
msh04332 317 .................................................. 317
sh03709 1401 TTGCTCCCTGGGACGTTGCCAGGGTCTCCACAGACTCTGAGCTCCCCATG 1450
1451 ----+----*----+----*----+----*----+----*----+----* 1500
msh04332 317 .................................................. 317
sh03709 1451 AGGTGGGAGCTCCACAGGATTTGGGCAGGGTCTCCATGAACTATAAACTC 1500
1501 ----+----*----+----*----+----*----+----*----+----* 1550
msh04332 317 ......GGGGAGAGTGGGGCAGGGAAGACAGAAGCCAGCAAGCACATCAT 360
| || | | | | || | ||||| || | |
sh03709 1501 TCCACTGAGGTGGGAGCTCCCTGGGACACAGAGAGTTTTTTTCAGACTCT 1550
1551 ----+----*----+----*----+----*----+----*----+----* 1600
msh04332 361 GCAGTACATTG....................................... 371
| | | | ||
sh03709 1551 GAACTCCCATGAAATGGAGCTCTTTGGAGCATGGACAGTGTCTTTAAGGA 1600
1601 ----+----*----+----*----+----*----+----*----+----* 1650
msh04332 372 ...............................................CTG 374
||
sh03709 1601 CTCTGAGCTACCCACCGAGGTGGGAGCTCAGTGGGACATGTGAAGCAGTG 1650
1651 ----+----*----+----*----+----*----+----*----+----* 1700
msh04332 375 CTGTCACCAACCCAAGCCAGAGGGCTGAGGTGGAGAGGGTGAAGAA.... 420
||| || | | | | || |||||| | || | |
sh03709 1651 TCTCCACGGACTCTGGGCTGCCCACTCAGGTGGGCTGTGTCTTGGACACA 1700
1701 ----+----*----+----*----+----*----+----*----+----* 1750
msh04332 421 .................................................. 421
sh03709 1701 GGCAGTGTCTCTATCAACTTTGGGCTCTGCTCTGAGGTAAGAGCCCCCTG 1750
1751 ----+----*----+----*----+----*----+----*----+----* 1800
msh04332 421 .................................................. 421
sh03709 1751 GGACAGGGGCACTATCTCCTTGGACTTTGAACTCCCACCAAAGTGGAGCT 1800
1801 ----+----*----+----*----+----*----+----*----+----* 1850
msh04332 421 .................................................. 421
sh03709 1801 CACTGGGACAGTGGCAACGTCTCCACGGATTCTGAGCTCCCGCTGAAGTG 1850
1851 ----+----*----+----*----+----*----+----*----+----* 1900
msh04332 421 .................................................. 421
sh03709 1851 GAGCTCCCTGGGAATCAGTCAGTGTCCAAGAACTCTGAGCTTCCCTGAGG 1900
1901 ----+----*----+----*----+----*----+----*----+----* 1950
msh04332 421 .................................................. 421
sh03709 1901 TGGGAGCCCTCTGGAACACAAGGAGTGTCCACGCAGACTCTGAGCTTCCA 1950
1951 ----+----*----+----*----+----*----+----*----+----* 2000
msh04332 421 ............................................TGTGCT 426
|| |||
sh03709 1951 TGAAGTAGGGCTGTCTGGGACACTGGCGGTGTCTCTATGGTCTCTGAGCT 2000
2001 ----+----*----+----*----+----*----+----*----+----* 2050
msh04332 427 CCTCAAGTCCACCTGTGTGCTCGAAGCCTTTGGCAATGCCCGCACCAA.. 474
||||| | | | | | | | | ||| ||| | ||| ||
sh03709 2001 CCTCACGGAGCTGGGAGCTCCCTCGGACATGGGCGATGTCTCCACAAACT 2050
2051 ----+----*----+----*----+----*----+----*----+----* 2100
msh04332 475 .................................................. 475
sh03709 2051 CTCCATTCCCCTATGAGGTGGAAGCTCTCTGCGACATGACCATTGTCTCT 2100
2101 ----+----*----+----*----+----*----+----*----+----* 2150
msh04332 475 .................................................. 475
sh03709 2101 GTGGAATCTGAGCTTCCCACTAGTGGGAGCCCCTTGGGACACAGGGCAGG 2150
2151 ----+----*----+----*----+----*----+----*----+----* 2200
msh04332 475 .................................................. 475
sh03709 2151 GTCTCCACAGACTCTAAGCTCCCACTGAAGTGGAGCTCTCTGGAATAACA 2200
2201 ----+----*----+----*----+----*----+----*----+----* 2250
msh04332 475 .................................................. 475
sh03709 2201 GCAGGATCTCCACAGACTCTTACCACCTCCAGTGAAGTGGGAACTTTTGG 2250
2251 ----+----*----+----*----+----*----+----*----+----* 2300
msh04332 475 .................................................. 475
sh03709 2251 GACACAGGCAGTGTCTCCATGGACTCTGAGCTCCCTGCTGAGGTGGGAGT 2300
2301 ----+----*----+----*----+----*----+----*----+----* 2350
msh04332 475 .................................................. 475
sh03709 2301 TCATGTGGCACCAGTTGTGTCTCCACAGACGCTGAGCTCCCTAGGACATG 2350
2351 ----+----*----+----*----+----*----+----*----+----* 2400
msh04332 475 .................................................. 475
sh03709 2351 GGCTCTCCCTGGGTGGAGAGCAATGTCTCCACGGAACCTGTGCTCCCTAC 2400
2401 ----+----*----+----*----+----*----+----*----+----* 2450
msh04332 475 .................................................. 475
sh03709 2401 TGAGGTGGGAGCTTCCTGGGACAGGGGCAGGGTCTCCAGTAACTCAGCTC 2450
2451 ----+----*----+----*----+----*----+----*----+----* 2500
msh04332 475 ...........TCGCAACCACAACTCCAGCCGCTTTGGCAAGTACATGGA 513
|| || | | || | || || || |
sh03709 2451 CCACTGAAGTGGAGCTCCCTAGGATTCTGCAGTTTGTCCACAAACTCTTA 2500
2501 ----+----*----+----*----+----*----+----*----+----* 2550
msh04332 514 CATCAACTTCGACTTCAAGG....GGGATCCTGTTGGTG....GACACAT 555
| || | | | ||| |||| || | | ||| ||| |
sh03709 2501 CCTCCTCACTCAGTGGGAGGTTTTGGGACCCGGGTAGTGTCTCCACATAC 2550
2551 ----+----*----+----*----+----*----+----*----+----* 2600
msh04332 556 CCACAGCTACCTGCTG.................................. 571
| ||||||| |||
sh03709 2551 TCTGAGCTACCCACTGAGGTGGGATCCCCCTGGGTCGAGGGCAATGTCTC 2600
2601 ----+----*----+----*----+----*----+----*----+----* 2650
msh04332 572 GAGAAGTCTAGGGTTCTCAAGCAACATGTAGGCGAGAGGAACTTCCATGC 621
| | | | | || | | ||| ||| | | | || | ||
sh03709 2601 CACAGGGACTGAGCTCCCTACCAAGATGAGGTCTGGCACAAGAACAGTGA 2650
2651 ----+----*----+----*----+----*----+----*----+----* 2700
msh04332 622 CT................................................ 623
||
sh03709 2651 CTTCATGGTGGAGTCATAGCTCCCACTGAAGTGGAGCTCCCTGACCCACT 2700
2701 ----+----*----+----*----+----*----+----*----+----* 2750
msh04332 624 .................................................. 624
sh03709 2701 GAACAGCTGAATGGGGAGCTTGCTGGCACACAGAAACTGTTCACACTGTC 2750
2751 ----+----*----+----*----+----*----+----*----+----* 2800
msh04332 624 .................................................. 624
sh03709 2751 TGACCTTCCCCCACGTTTGTTCGTTCAATACTGGAAGGAAGCGCAAGTCT 2800
2801 ----+----*----+----*----+----*----+----*----+----* 2850
msh04332 624 .................................................. 624
sh03709 2801 GTTTGTTCTCCTGCCTGTGTGTGTGTACAGGGGGACATCCTGGGAGCTTA 2850
2851 ----+----*----+----*----+----*----+----*----+----* 2900
L L R G S E D
msh04332 624 .....................TCTACCAGTTGCTTCGAGGCAGTGAGGAC 652
|| | ||||||| ||||||||||||||
sh03709 2851 TTTGTCTAAAGGATGCCTGTGTCCTCTAGTTGCTGAGAGGCAGTGAGGAC 2900
L L R G S E D
2901 ----+----*----+----*----+----*----+----*----+----* 2950
Q E L Q G L H L E R N P A V Y N F
msh04332 653 CAAGAGCTGCAAGGACTGCATCTGGAAAGAAATCCTGCTGTGTATAATTT 702
| ||||||| | |||||| |||| ||||| |||||||| || |||||
sh03709 2901 AAGCAGCTGCATGAACTGCACTTGGAGAGAAACCCTGCTGTATACAATTT 2950
K Q L H E L H L E R N P A V Y N F
2951 ----+----*----+----*----+----*----+----*----+----* 3000
T R Q G A G L N M G V H N A L D S
msh04332 703 CACGCGTCAGGGAGCTGGGCTCAACATGGGTGTGCACAATGCCTTGGACA 752
||| | |||||||| || ||||||||| |||||||| |||||||||||
sh03709 2951 CACACACCAGGGAGCAGGACTCAACATGACTGTGCACAGTGCCTTGGACA 3000
T H Q G A G L N M T V H S A L D S
3001 ----+----*----+----*----+----*----+----*----+----* 3050
D E K S H Q G V M E A M R I I G
msh04332 753 GTGATGAGAAGAGCCACCAAGGAGTGATGGAGGCCATGAGGATCATCGGC 802
|||||||| |||||||||| | ||||| |||||||||||| ||||||||
sh03709 3001 GTGATGAGCAGAGCCACCAGGCAGTGACCGAGGCCATGAGGGTCATCGGC 3050
D E Q S H Q A V T E A M R V I G
3051 ----+----*----+----*----+----*----+----*----+----* 3100
F S P D E V E S I H R I L A A I L
msh04332 803 TTCAGTCCTGACGAGGTGGAGTCCATCCATCGCATCCTTGCCGCCATATT 852
||||||||||| ||||||||||| | ||||||||||| || ||||||||
sh03709 3051 TTCAGTCCTGAAGAGGTGGAGTCTGTGCATCGCATCCTGGCTGCCATATT 3100
F S P E E V E S V H R I L A A I L
3101 ----+----*----+----*----+----*----+----*----+----* 3150
H L G N I E F V E T E E N G P Q K
msh04332 853 ACACCTGGGAAACATCGAGTTTGTGGAGACAGAGGAAAATGGACCACAGA 902
||||||||||||||||||||||||||||| ||||| ||| | ||||
sh03709 3101 GCACCTGGGAAACATCGAGTTTGTGGAGACGGAGGAGGGTGGGCTGCAGA 3150
H L G N I E F V E T E E G G L Q K
3151 ----+----*----+----*----+----*----+----*----+----* 3200
G G L E V A D E A L V G Y V A K
msh04332 903 AAGGAGGCCTGGAAGTGGCTGATGAGGCCCTGGTAGGATATGTGGCCAAG 952
| | ||||||| |||||| || ||||| ||||| | ||||||| ||
sh03709 3151 AGGAGGGCCTGGCAGTGGCCGAGGAGGCACTGGTGGACCATGTGGCTGAG 3200
E G L A V A E E A L V D H V A E
3201 ----+----*----+----*----+----*----+----*----+----* 3250
L T A T P R D L V L R T L L A R T
msh04332 953 CTGACAGCCACTCCCAGAGACCTTGTTCTGCGAACCCTGCTGGCTCGAAC 1002
||||| ||||| ||| | ||||| || || || ||||||||||||| ||
sh03709 3201 CTGACGGCCACACCCCGGGACCTCGTGCTCCGCTCCCTGCTGGCTCGCAC 3250
L T A T P R D L V L R S L L A R T
3251 ----+----*----+----*----+----*----+----*----+----* 3300
V A S G G R E V I E K S H T V A E
msh04332 1003 AGTGGCTTCAGGAGGCCGAGAAGTCATTGAGAAGAGCCACACCGTGGCTG 1052
||| || || |||||| | ||| |||| |||||| ||||||| | ||||
sh03709 3251 AGTTGCCTCGGGAGGCAGGGAACTCATAGAGAAGGGCCACACTGCAGCTG 3300
V A S G G R E L I E K G H T A A E
3301 ----+----*----+----*----+----*----+----*----+----* 3350
A S Y A R D A C A K A M Y Q R L
msh04332 1053 AGGCCAGCTATGCCCGGGATGCCTGTGCAAAGGCGATGTACCAGCGACTG 1102
|||||||||||||||||||||||||||| ||||| |||||||||| |||
sh03709 3301 AGGCCAGCTATGCCCGGGATGCCTGTGCCAAGGCAGTGTACCAGCGGCTG 3350
A S Y A R D A C A K A V Y Q R L
3351 ----+----*----+----*----+----*----+----*----+----* 3400
F E W V V N K I N S I M E P R N R
msh04332 1103 TTTGAGTGGGTTGTGAACAAGATCAATAGCATCATGGAACCCCGAAACCG 1152
||||||||||| ||||||| |||||| || ||||||||||||| |||
sh03709 3351 TTTGAGTGGGTGGTGAACAGGATCAACAGTGTCATGGAACCCCGGGGCCG 3400
F E W V V N R I N S V M E P R G R
3401 ----+----*----+----*----+----*----+----*----+----* 3450
D P R C D G K D T V I G V L D I Y
msh04332 1153 AGACCCTCGGTGTGATGGCAAGGATACTGTCATTGGGGTGCTGGACATTT 1202
|| |||||| ||||||||||||| || |||||||| ||||||||||| |
sh03709 3401 GGATCCTCGGCGTGATGGCAAGGACACAGTCATTGGCGTGCTGGACATCT 3450
D P R R D G K D T V I G V L D I Y
3451 ----+----*----+----*----+----*----+----*----+----* 3500
G F E V F P V N S F E Q F C I N
msh04332 1203 ACGGCTTTGAGGTGTTCCCTGTCAACAGCTTTGAGCAGTTCTGCATCAAC 1252
| ||||| |||||||| || |||||||| || ||||||||||||||||||
sh03709 3451 ATGGCTTCGAGGTGTTTCCCGTCAACAGTTTCGAGCAGTTCTGCATCAAC 3500
G F E V F P V N S F E Q F C I N
3501 ----+----*----+----*----+----*----+----*----+----* 3550
Y C N E K L Q Q L F I Q L I L K Q
msh04332 1253 TACTGCAACGAGAAGCTGCAGCAGCTCTTTATCCAGCTTATCCTGAAGCA 1302
|||||||||||||||||||||||||| || |||||||| |||||||||||
sh03709 3501 TACTGCAACGAGAAGCTGCAGCAGCTATTCATCCAGCTCATCCTGAAGCA 3550
Y C N E K L Q Q L F I Q L I L K Q
3551 ----+----*----+----*----+----*----+----*----+----* 3600
E Q E E Y E R E G I A W Q T I E Y
msh04332 1303 AGAGCAGGAGGAGTATGAGCGAGAGGGCATCGCCTGGCAGACCATCGAGT 1352
|| ||||| ||||| ||||| ||||||||| ||||||||| | | ||||
sh03709 3551 GGAACAGGAAGAGTACGAGCGCGAGGGCATCACCTGGCAGAGCGTTGAGT 3600
E Q E E Y E R E G I T W Q S V E Y
3601 ----+----*----+----*----+----*----+----*----+----* 3650
F N N A T I V E L V E Q P R R G
msh04332 1353 ACTTCAACAACGCTACCATTGTGGAACTTGTAGAGCAGCCCCGCAGAGGC 1402
| ||||||||||| ||||||||||| || || |||| ||||| | | |||
sh03709 3601 ATTTCAACAACGCCACCATTGTGGATCTGGTGGAGCGGCCCCACCGTGGC 3650
F N N A T I V D L V E R P H R G
3651 ----+----*----+----*----+----*----+----*----+----* 3700
I L A V L D E A C S T A G P I T D
msh04332 1403 ATCCTGGCTGTGTTAGATGAAGCCTGCAGCACGGCAGGCCCCATCACTGA 1452
|||||||| ||| | || || ||||||||| | || ||| ||||||||||
sh03709 3651 ATCCTGGCCGTGCTGGACGAGGCCTGCAGCTCTGCTGGCACCATCACTGA 3700
I L A V L D E A C S S A G T I T D
3701 ----+----*----+----*----+----*----+----*----+----* 3750
R I F L Q T L D T H H R H H P H Y
msh04332 1453 CCGAATCTTCCTGCAGACCCTGGACACACACCACCGCCACCACCCACACT 1502
||||||||||||||||||||||||||| ||||||||||| |||| |||||
sh03709 3701 CCGAATCTTCCTGCAGACCCTGGACACGCACCACCGCCATCACCTACACT 3750
R I F L Q T L D T H H R H H L H Y
3751 ----+----*----+----*----+----*----+----*----+----* 3800
S S R Q L C P T D K T M E F G R
msh04332 1503 ATTCCAGCCGCCAGCTTTGCCCTACGGACAAGACCATGGAGTTTGGCCGA 1552
| ||||||||||||| ||||| || ||||||||||||||||||||||||
sh03709 3751 ACACCAGCCGCCAGCTCTGCCCCACAGACAAGACCATGGAGTTTGGCCGA 3800
T S R Q L C P T D K T M E F G R
3801 ----+----*----+----*----+----*----+----*----+----* 3850
D F Q I K H Y A G D V T Y S V E G
msh04332 1553 GACTTCCAGATCAAACACTATGCAGGCGATGTCACGTACTCTGTGGAAGG 1602
||||||| |||||| ||||||||||| || ||||||||||| ||||||||
sh03709 3801 GACTTCCGGATCAAGCACTATGCAGGGGACGTCACGTACTCCGTGGAAGG 3850
D F R I K H Y A G D V T Y S V E G
3851 ----+----*----+----*----+----*----+----*----+----* 3900
F I D K N R D S L F Q D F K R L L
msh04332 1603 CTTCATTGACAAGAATAGAGACTCTCTCTTCCAGGACTTCAAACGGCTGC 1652
|||||| |||||||| ||||| | ||||||||||||||||| |||||||
sh03709 3851 CTTCATCGACAAGAACAGAGATTTCCTCTTCCAGGACTTCAAGCGGCTGC 3900
F I D K N R D F L F Q D F K R L L
3901 ----+----*----+----*----+----*----+----*----+----* 3950
Y N S V D P T L R A M W P D G Q
msh04332 1653 TGTACAATAGTGTGGATCCCACCTTGCGAGCCATGTGGCCTGACGGGCAA 1702
||||||| || ||| ||||| | || ||||||||||| ||||||||
sh03709 3901 TGTACAACAGCACGGACCCCACTCTACGGGCCATGTGGCCGGACGGGCAG 3950
Y N S T D P T L R A M W P D G Q
3951 ----+----*----+----*----+----*----+----*----+----* 4000
Q D I T E V T K R P L T A G T L F
msh04332 1703 CAGGACATCACGGAAGTGACCAAGCGTCCCCTGACAGCCGGCACACTCTT 1752
||||||||||| || ||||||||||| |||||||| || |||||||||||
sh03709 3951 CAGGACATCACAGAGGTGACCAAGCGCCCCCTGACGGCTGGCACACTCTT 4000
Q D I T E V T K R P L T A G T L F
4001 ----+----*----+----*----+----*----+----*----+----* 4050
K N S M V A L V E N L A S K E P F
msh04332 1753 TAAGAATTCCATGGTTGCCCTGGTGGAAAACTTGGCTTCCAAGGAACCCT 1802
||||| |||||||| ||||||||||| ||| | || |||||||| ||||
sh03709 4001 CAAGAACTCCATGGTGGCCCTGGTGGAGAACCTTGCCTCCAAGGAGCCCT 4050
K N S M V A L V E N L A S K E P F
4051 ----+----*----+----*----+----*----+----*----+----* 4100
Y V R C I K P N E D K V A G R L
msh04332 1803 TCTATGTCCGCTGCATCAAACCCAACGAAGACAAGGTGGCTGGGCGGCTC 1852
|||| |||||||||||||| ||||| || |||||||| |||||| |||
sh03709 4051 TCTACGTCCGCTGCATCAAGCCCAATGAGGACAAGGTAGCTGGGAAGCTG 4100
Y V R C I K P N E D K V A G K L
4101 ----+----*----+----*----+----*----+----*----+----* 4150
D E A H C R H Q V E Y L G L L E N
msh04332 1853 GATGAAGCCCACTGTCGTCACCAGGTCGAATACCTGGGACTATTGGAGAA 1902
||||| ||||||||| |||||||||| ||||||||| || |||||||
sh03709 4101 GATGAGAACCACTGTCGCCACCAGGTCGCATACCTGGGGCTGCTGGAGAA 4150
D E N H C R H Q V A Y L G L L E N
4151 ----+----*----+----*----+----*----+----*----+----* 4200
V R V R R A G F A S R Q P Y P R F
msh04332 1903 TGTGAGGGTCCGCAGGGCTGGCTTTGCTTCCCGGCAGCCCTACCCTCGAT 1952
|||||||||||||||||||||||| |||||||| ||||||||| ||||||
sh03709 4151 TGTGAGGGTCCGCAGGGCTGGCTTCGCTTCCCGCCAGCCCTACTCTCGAT 4200
V R V R R A G F A S R Q P Y S R F
4201 ----+----*----+----*----+----*----+----*----+----* 4250
L L R Y K M T C E Y T W P N H L
msh04332 1953 TCCTGCTCAGGTACAAGATGACCTGTGAGTACACGTGGCCCAACCACCTG 2002
|||||||||||||||||||||||||||| ||||| |||||||||||||||
sh03709 4201 TCCTGCTCAGGTACAAGATGACCTGTGAATACACATGGCCCAACCACCTG 4250
L L R Y K M T C E Y T W P N H L
4251 ----+----*----+----*----+----*----+----*----+----* 4300
L G S D R D A V S A L L E Q H G L
msh04332 2003 CTGGGCTCTGACCGGGATGCGGTGAGCGCCCTGCTGGAACAGCATGGGCT 2052
|||||||| ||| || || |||||||| || ||||| |||||||||||
sh03709 4251 CTGGGCTCCGACAAGGCAGCCGTGAGCGCTCTCCTGGAGCAGCATGGGCT 4300
L G S D K A A V S A L L E Q H G L
4301 ----+----*----+----*----+----*----+----*----+----* 4350
Q G D V A F G H S K L F I R S P R
msh04332 2053 GCAAGGGGATGTGGCCTTTGGCCACAGCAAGCTGTTCATCCGATCCCCAA 2102
||| ||||| |||||||||||||||||||||||||||||||| || ||
sh03709 4301 GCAGGGGGACGTGGCCTTTGGCCACAGCAAGCTGTTCATCCGCTCACCCC 4350
Q G D V A F G H S K L F I R S P R
4351 ----+----*----+----*----+----*----+----*----+----* 4400
T L V T L E Q S R A R L I P I I
msh04332 2103 GGACGCTGGTCACTCTGGAGCAGAGCCGAGCTCGCCTGATTCCCATCATT 2152
|||| |||||||| ||||||||||||||||| ||||| || |||||||||
sh03709 4351 GGACACTGGTCACACTGGAGCAGAGCCGAGCCCGCCTCATCCCCATCATT 4400
T L V T L E Q S R A R L I P I I
4401 ----+----*----+----*----+----*----+----*----+----* 4450
V L L L Q K A W R G T L A R W H C
msh04332 2153 GTGTTATTGCTGCAGAAGGCTTGGCGGGGCACCCTGGCTAGGTGGCACTG 2202
||| | | |||||||||| |||||||||||| |||| ||||||| |||
sh03709 4401 GTGCTGCTATTGCAGAAGGCATGGCGGGGCACCTTGGCGAGGTGGCGCTG 4450
V L L L Q K A W R G T L A R W R C
4451 ----+----*----+----*----+----*----+----*----+----* 4500
R R L R A I Y T I M R W F R R H K
msh04332 2203 CCGGCGACTAAGGGCCATCTACACCATCATGCGCTGGTTCCGGAGGCACA 2252
|||| | || ||||| ||||||||||||||||||||||||||||| ||||
sh03709 4451 CCGGAGGCTGAGGGCTATCTACACCATCATGCGCTGGTTCCGGAGACACA 4500
R R L R A I Y T I M R W F R R H K
4501 ----+----*----+----*----+----*----+----*----+----* 4550
V R A H L I E L Q R R F Q A A R
msh04332 2253 AGGTGCGTGCTCACCTGATTGAACTACAGCGCCGGTTCCAGGCTGCACGG 2302
||||||| ||||||||| ||| || ||||| || |||||||||||| ||
sh03709 4501 AGGTGCGGGCTCACCTGGCTGAGCTGCAGCGGCGATTCCAGGCTGCAAGG 4550
V R A H L A E L Q R R F Q A A R
4551 ----+----*----+----*----+----*----+----*----+----* 4600
Q P P L Y G R D L V W P T P P A V
msh04332 2303 CAGCCCCCACTCTATGGCCGTGACCTTGTGTGGCCCACACCTCCTGCTGT 2352
||||| |||||||| || ||||||||||||||||| || ||||||||
sh03709 4551 CAGCCGCCACTCTACGGGCGTGACCTTGTGTGGCCGCTGCCCCCTGCTGT 4600
Q P P L Y G R D L V W P L P P A V
4601 ----+----*----+----*----+----*----+----*----+----* 4650
L Q P F Q D T C R V L F S R W R A
msh04332 2353 GCTGCAGCCCTTCCAGGACACTTGCCGTGTTCTCTTCAGCAGGTGGCGGG 2402
||||||||||||||||||||| |||| | |||||| ||||||||||||
sh03709 4601 GCTGCAGCCCTTCCAGGACACCTGCCACGCACTCTTCTGCAGGTGGCGGG 4650
L Q P F Q D T C H A L F C R W R A
4651 ----+----*----+----*----+----*----+----*----+----* 4700
R Q L V K N I P P S D M T Q I K
msh04332 2403 CACGGCAGTTAGTGAAGAACATCCCTCCTTCAGACATGACCCAGATCAAG 2452
| |||||| | |||||||||||||| |||||||||||| |||||||||||
sh03709 4651 CCCGGCAGCTGGTGAAGAACATCCCCCCTTCAGACATGCCCCAGATCAAG 4700
R Q L V K N I P P S D M P Q I K
4701 ----+----*----+----*----+----*----+----*----+----* 4750
A K V A A M G A L Q G L R Q D W G
msh04332 2453 GCCAAGGTGGCTGCTATGGGGGCCTTGCAAGGATTGCGGCAGGACTGGGG 2502
||||||||||| || ||||||||| ||||||| | || |||||||||||
sh03709 4701 GCCAAGGTGGCCGCCATGGGGGCCCTGCAAGGGCTTCGTCAGGACTGGGG 4750
A K V A A M G A L Q G L R Q D W G
4751 ----+----*----+----*----+----*----+----*----+----* 4800
C Q R A W A R D Y L S S D T D N P
msh04332 2503 TTGCCAGCGGGCCTGGGCCCGAGACTACCTGTCCTCTGACACTGACAACC 2552
|||| ||||||||||||||||||||||||||||||| ||||||||| |
sh03709 4751 CTGCCGACGGGCCTGGGCCCGAGACTACCTGTCCTCTGCCACTGACAATC 4800
C R R A W A R D Y L S S A T D N P
4801 ----+----*----+----*----+----*----+----*----+----* 4850
T A S H L F A E Q L K A L R E K
msh04332 2553 CCACAGCTTCCCATCTGTTTGCTGAGCAACTAAAGGCACTTCGGGAGAAA 2602
||||||| || ||||||||| ||| ||||||| |||||||||| |||
sh03709 4801 CCACAGCATCAAGCCTGTTTGCTCAGCGACTAAAGACACTTCGGGACAAA 4850
T A S S L F A Q R L K T L R D K
4851 ----+----*----+----*----+----*----+----*----+----* 4900
D G F G S V L F S S H V R K V N R
msh04332 2603 GATGGCTTTGGCTCTGTGCTTTTCTCCAGCCATGTGCGCAAGGTGAATCG 2652
|||||||| || ||||||| || || |||||||| ||||||||||| ||
sh03709 4851 GATGGCTTCGGGGCTGTGCTCTTTTCAAGCCATGTCCGCAAGGTGAACCG 4900
D G F G A V L F S S H V R K V N R
4901 ----+----*----+----*----+----*----+----*----+----* 4950
F R K S R D R A L L L T D R Y L Y
msh04332 2653 CTTCCGCAAGAGCCGGGACCGGGCCCTTCTGCTCACAGATCGGTATCTGT 2702
||||| ||||| |||| |||||||||| ||||||||||| | | | || |
sh03709 4901 CTTCCACAAGATCCGGAACCGGGCCCTCCTGCTCACAGACCAGCACCTCT 4950
F H K I R N R A L L L T D Q H L Y
4951 ----+----*----+----*----+----*----+----*----+----* 5000
K L E P G R Q Y R V M R A V P L
msh04332 2703 ACAAGCTGGAGCCTGGACGACAGTACCGGGTGATGCGGGCTGTGCCTCTG 2752
|||||||||| |||| || |||||||||||||||||||| ||||| ||
sh03709 4951 ACAAGCTGGACCCTGACCGGCAGTACCGGGTGATGCGGGCCGTGCCCCTT 5000
K L D P D R Q Y R V M R A V P L
5001 ----+----*----+----*----+----*----+----*----+----* 5050
E A V T G L S V T S G R D Q L V V
msh04332 2753 GAGGCGGTGACAGGGCTGAGTGTGACCAGTGGAAGAGATCAGCTGGTGGT 2802
||||||||||| |||||||| |||||||| ||| |||| |||||||||||
sh03709 5001 GAGGCGGTGACGGGGCTGAGCGTGACCAGCGGAGGAGACCAGCTGGTGGT 5050
E A V T G L S V T S G G D Q L V V
5051 ----+----*----+----*----+----*----+----*----+----* 5100
L H A Q G Y D D L V V C L H R S Q
msh04332 2803 GTTACATGCCCAAGGCTATGATGATCTTGTAGTGTGTCTACACCGTTCCC 2852
| | || |||| ||| | || || || || ||||| || ||||| ||||
sh03709 5051 GCTGCACGCCCGCGGCCAGGACGACCTCGTGGTGTGCCTGCACCGCTCCC 5100
L H A R G Q D D L V V C L H R S R
5101 ----+----*----+----*----+----*----+----*----+----* 5150
P P L D N R I G E L V G M L A A
msh04332 2853 AACCACCACTGGACAATCGAATTGGGGAGCTGGTGGGCATGCTGGCTGCA 2902
|| ||| ||||||| || ||||||||||||||||| ||||||| |||
sh03709 5101 GGCCGCCATTGGACAACCGCGTTGGGGAGCTGGTGGGCGTGCTGGCCGCA 5150
P P L D N R V G E L V G V L A A
5151 ----+----*----+----*----+----*----+----*----+----* 5200
H C Q G E G R T L E V R V S D C I
msh04332 2903 CACTGCCAGGGAGAGGGACGAACTCTGGAGGTCCGTGTCTCTGACTGCAT 2952
||||||||||| ||||| || || |||||||| || ||||| ||||||||
sh03709 5151 CACTGCCAGGGGGAGGGCCGCACCCTGGAGGTTCGCGTCTCCGACTGCAT 5200
H C Q G E G R T L E V R V S D C I
5201 ----+----*----+----*----+----*----+----*----+----* 5250
P L S Q R G A R R L I S V E P R P
msh04332 2953 CCCACTGAGCCAGCGTGGTGCCCGGCGCCTCATTTCTGTGGAGCCCAGGC 3002
|||||| ||||| || || | |||||||||||| || |||||||||||||
sh03709 5201 CCCACTAAGCCATCGCGGGGTCCGGCGCCTCATCTCCGTGGAGCCCAGGC 5250
P L S H R G V R R L I S V E P R P
5251 ----+----*----+----*----+----*----+----*----+----* 5300
E Q P E P D F Q S S R S T F T L
msh04332 3003 CAGAGCAGCCTGAGCCAGATTTCCAAAGCAGCCGTAGCACCTTTACCCTC 3052
| |||||||| ||||| ||||||| || || || |||| |||||
sh03709 5251 CGGAGCAGCCAGAGCCCGATTTCCGCTGCGCTCGCGGCTCCTTCACCCTG 5300
E Q P E P D F R C A R G S F T L
5301 ----+----*----+----*----+----*----+----*----+----* 5350
L W P S H *
msh04332 3053 CTCTGGCCAAGCCACTGAGCAAGGCCAAACCAGTTTAACCTGGTTTCCAC 3102
|||||||| |||| |||||| | || ||| | ||| |
sh03709 5301 CTCTGGCCCAGCCGCTGAGC..GCCCGCACCCGCCGCACCCCG....... 5341
L W P S R *
5351 ----+----*----+----*----+----*----+----*----+----* 5400
msh04332 3103 GCTGTTCTAAATACCTGGTCTTGACTGCACTAAAGGCCAGGACTTGTCTA 3152
||||| | |||||
sh03709 5342 .................................AGGCCGCCAATTGTCCG 5358
5401 ----+----*----+----*----+----*----+----*----+ 5445
msh04332 3153 CCCTTACATGGAACATTGCAAAATAAAGATGTTATATTTGTTTTC 3197
||| | | | |||||| || | | |
sh03709 5359 CCCCGCC....AGCGCTGCAAATAAACCTTCTGAGTC........ 5391