Comparison of KIAA cDNA sequences between mouse and human (FLJ00407)
<<Original sequence data>>
mouse mFLJ00407 (msh04044) length: 3513 bp, CDS: 128 - 3373
human (sj08554) length: 4329 bp, CDS: 2428 - 4203
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 30 - 2564 1410 295 17.3
CDS: 2565 - 4247 1275 345 21.3
3'UTR: 4248 - 4391 87 54 38.3
amino acid
CDS: 2565 - 4247 391 165 29.7
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
msh04044 1 .............................GGAGGTTCGGAGTAAGTCTTC 21
| || ||| ||
sj08554 1 CACTTCCAAATTTGGCAAATTTCACTTGGAGTGGACTGGATAGCAGCTGT 50
51 ----+----*----+----*----+----*----+----*----+----* 100
msh04044 22 CTCTGTGCTCTGCGCTGGC..................GCTGCGGTCCAAA 53
||||| |||||| | | ||||
sj08554 51 CTCTGGAGCAGATGCTGGCAGGGGAATGGGCTGGGAGGAGCAGAGCCAAT 100
101 ----+----*----+----*----+----*----+----*----+----* 150
msh04044 54 CTCTTTGGAACTCCCCGGTTTCT...GCCACCAGGCATCTCTTGCTTTCC 100
| || ||| || | | || | |||||| | ||||
sj08554 101 CACTGGTGAATCCCGAGCTCCCTGGGGACACCAGCCTGCTCT........ 142
151 ----+----*----+----*----+----*----+----*----+----* 200
msh04044 101 CTGCGCCACCCCTTCCTCTGCCCCTAGGCCTGGGACACCCTTCCGACAGG 150
|| |||| ||||||||| | | |||| |
sj08554 143 CTTCGCCTCCCCTTCCTTTTTATTT..............CTTCTGTTCTC 178
201 ----+----*----+----*----+----*----+----*----+----* 250
msh04044 151 AAGCGGCTCTTCCAGCCCCAGAAACGCTGACACTGGGTTTTCTCCCAGCT 200
||| || || | || || | |||| |
sj08554 179 CAGCCTCTTCCCCTTCTTTTTCCACCTCTCCAGCCACTCATCTCTGCCCA 228
251 ----+----*----+----*----+----*----+----*----+----* 300
msh04044 201 GCTCCTGCTGTCAACAGGGGCCCTACATGGCATCACCCGCCTCCACCAAC 250
||| |||| || |||| | ||| |||||| ||||| |||||||||||
sj08554 229 GCTGCTGCCCTCCCCAGGAGGCCTCCATGGCTTCACCTACCTCCACCAAC 278
301 ----+----*----+----*----+----*----+----*----+----* 350
msh04044 251 CCAGCACATGACCACTTTGAGACCTTTGTGCAGGCACAGCTGTGCCAGGA 300
||||| |||| ||||||||||| ||| ||||||| ||||||||||||||
sj08554 279 CCAGCGCATGCCCACTTTGAGAGCTTCCTGCAGGCCCAGCTGTGCCAGGA 328
351 ----+----*----+----*----+----*----+----*----+----* 400
msh04044 301 TGTACTGAGTAGCTTTCAGGGGCTCTGTAGAGCCCTGGGAGTGGAGTCTG 350
|| ||||| ||||| |||| ||| ||| | |||||||| |||| | |
sj08554 329 CGTGCTGAGCAGCTTCCAGGAGCTGTGTGGGGCCCTGGGGCTGGAACCCG 378
401 ----+----*----+----*----+----*----+----*----+----* 450
msh04044 351 GTGGGGGATTGTCCCAGTACCACAAGATCAAGGCCCAGCTCAACTACTGG 400
||||||| || ||||||||||||||||||||| ||||||||||||||||
sj08554 379 GTGGGGGGCTGCCCCAGTACCACAAGATCAAGGACCAGCTCAACTACTGG 428
451 ----+----*----+----*----+----*----+----*----+----* 500
msh04044 401 AGTGCCAAGTCACTGTGGGCCAAGTTGGACAAGAGAGCGAGCCAGCCTGT 450
|| ||||||||||||||| ||||| |||||||| |||| ||||||||||
sj08554 429 AGCGCCAAGTCACTGTGGACCAAGCTGGACAAGCGAGCAGGCCAGCCTGT 478
501 ----+----*----+----*----+----*----+----*----+----* 550
msh04044 451 GTACCAGCAAGGCCAGGCCTGTACCAACACCAAGTGTCTCGTGGTAGGTG 500
|||||||| |||| |||||| |||| ||||||||| || ||||| ||||
sj08554 479 CTACCAGCAGGGCCGGGCCTGCACCAGCACCAAGTGCCTGGTGGTGGGTG 528
551 ----+----*----+----*----+----*----+----*----+----* 600
msh04044 501 CCGGGCCTTGCGGACTTCGGGCTGCCGTGGAGTTGGCACTGTTAGGTGCC 550
| || |||||||| || |||| || |||||| |||| ||| | || |||
sj08554 529 CTGGACCTTGCGGGCTGCGGGTCGCTGTGGAGCTGGCGCTGCTGGGGGCC 578
601 ----+----*----+----*----+----*----+----*----+----* 650
msh04044 551 CGAGTGGTACTTGTGGAAAAGCGTATCAAGTTCTCTAGGCACAATGTGCT 600
|||||||| || ||||||||||| | |||||||||| | ||||| |||||
sj08554 579 CGAGTGGTGCTGGTGGAAAAGCGCACCAAGTTCTCTCGCCACAACGTGCT 628
651 ----+----*----+----*----+----*----+----*----+----* 700
msh04044 601 CCATCTCTGGCCCTTCACCATCCATGACCTTCGGGCACTTGGGGCCAAGA 650
||| |||||||||||||||||||| ||||| |||||||| || || ||||
sj08554 629 CCACCTCTGGCCCTTCACCATCCACGACCTGCGGGCACTCGGTGCTAAGA 678
701 ----+----*----+----*----+----*----+----*----+----* 750
msh04044 651 AGTTCTACGGGCGCTTCTGTACTGGCACCCTGGACCATATCAGCATCCGA 700
||||||||||||||||||| || |||||||||||||| ||||||||| |
sj08554 679 AGTTCTACGGGCGCTTCTGCACCGGCACCCTGGACCACATCAGCATCAGG 728
751 ----+----*----+----*----+----*----+----*----+----* 800
msh04044 701 CAGCTTCAGCTGCTTCTACTGAAGGTGGCCTTACTGTTGGGGGTGGAGAT 750
||||| ||||||||||| |||||||| || || ||| |||||||||| ||
sj08554 729 CAGCTCCAGCTGCTTCTGCTGAAGGTAGCATTGCTGCTGGGGGTGGAAAT 778
801 ----+----*----+----*----+----*----+----*----+----* 850
msh04044 751 TCACTGGGGCGTCAAATTCACTGGCCTCCAGCCCCCTCCCAGAAAAGGGA 800
||||||||| |||| ||||||||||||||||||||||| || || ||||
sj08554 779 TCACTGGGGTGTCACTTTCACTGGCCTCCAGCCCCCTCCTAGGAAGGGGA 828
851 ----+----*----+----*----+----*----+----*----+----* 900
msh04044 801 GTGGCTGGCGTGCTCAGCTCCAGCCCAACCCCCCAGCCCAACTGGCCAGC 850
||||||||||||| |||||||| ||||||||||| ||||| ||||||| |
sj08554 829 GTGGCTGGCGTGCCCAGCTCCAACCCAACCCCCCTGCCCAGCTGGCCAAC 878
901 ----+----*----+----*----+----*----+----*----+----* 950
msh04044 851 TATGAGTTTGATGTCCTCATCTCAGCTGCAGGAGGCAAATTTGTCCCTGA 900
||||| ||||| ||||| ||||| ||||||||||| ||||| ||||||||
sj08554 879 TATGAATTTGACGTCCTTATCTCGGCTGCAGGAGGTAAATTCGTCCCTGA 928
951 ----+----*----+----*----+----*----+----*----+----* 1000
msh04044 901 .................................................. 901
sj08554 929 AGGTGAGTGATCACTTCCCTCAAAGAAGCCAGCATCTCTGGCACATCCTG 978
1001 ----+----*----+----*----+----*----+----*----+----* 1050
msh04044 901 .................................................. 901
sj08554 979 GGCCTTTCTAGATTGTTATAACCCCCTCCTCCTGCCATTGTTCACCTACC 1028
1051 ----+----*----+----*----+----*----+----*----+----* 1100
msh04044 901 .........AGGCTTCACTATACGAGAGATGCGTGGCAAACTGGCCATTG 941
|||||||| | ||||| ||||| ||||||||||||||||
sj08554 1029 GCCACCTCTAGGCTTCAAAGTTCGAGAAATGCGAGGCAAACTGGCCATTG 1078
1101 ----+----*----+----*----+----*----+----*----+----* 1150
msh04044 942 GCATCACAGCCAACTTTGTGAATGGGCGCACGGTGGAGGAGACACAGGTG 991
||||||||||||||||||||||||| ||||| ||||||||||||||||||
sj08554 1079 GCATCACAGCCAACTTTGTGAATGGACGCACCGTGGAGGAGACACAGGTG 1128
1151 ----+----*----+----*----+----*----+----*----+----* 1200
msh04044 992 CCGGAGATCAGTGGTGTAGCTCGAATCTACAACCAAAAATTCTTCCAGAG 1041
|||||||||||||||||||| | ||||||||||| | |||||||||||
sj08554 1129 CCGGAGATCAGTGGTGTAGCCAGGATCTACAACCAGAGCTTCTTCCAGAG 1178
1201 ----+----*----+----*----+----*----+----*----+----* 1250
msh04044 1042 CCTGCTCAAAGCCACAGGT............................... 1060
||| |||||||||||||||
sj08554 1179 CCTTCTCAAAGCCACAGGTCAGGGACCCTCTTGCTGAATTTCCCCTCCCC 1228
1251 ----+----*----+----*----+----*----+----*----+----* 1300
msh04044 1061 .................................................. 1061
sj08554 1229 CTGCCTGACTGTGGCCTGGCTCCTGCCTCTCCCTTCCAAACTTGTCCTCA 1278
1301 ----+----*----+----*----+----*----+----*----+----* 1350
msh04044 1061 .................................................. 1061
sj08554 1279 CTGCAAGGAACTCCACACTTTTCTGTTTTTTTGGTCTCAGCAGCAAAGGA 1328
1351 ----+----*----+----*----+----*----+----*----+----* 1400
msh04044 1061 .................................................. 1061
sj08554 1329 GAAGGAACCTGTCCCCTCAGGGATTAAGCAAGCACAGCCCTAGTTGATCA 1378
1401 ----+----*----+----*----+----*----+----*----+----* 1450
msh04044 1061 .................................................. 1061
sj08554 1379 CCCAGCATGAAAAGTCCTGGAATCTCTCAGAGATGAACCTGTGTATGGGA 1428
1451 ----+----*----+----*----+----*----+----*----+----* 1500
msh04044 1061 .................................................. 1061
sj08554 1429 GTTTTGCTTAAGTGGTACTTCAAGAAGGTGCCTCTGTTTACTTTGGTTTT 1478
1501 ----+----*----+----*----+----*----+----*----+----* 1550
msh04044 1061 .................................................. 1061
sj08554 1479 GCACTGCCATGCGACCAGGTGGTGCAGGTCTCCCAAATGCCACCCCCCTC 1528
1551 ----+----*----+----*----+----*----+----*----+----* 1600
msh04044 1061 .................................................. 1061
sj08554 1529 CAAGCTTCCCTCTTTGCTCTAAGTCCTCAGGCCTCCTGGGCCTGGGACAG 1578
1601 ----+----*----+----*----+----*----+----*----+----* 1650
msh04044 1061 .................................................. 1061
sj08554 1579 ATGGTTGTTTGTGTCATCAGGACTCGTGGGGTTCTATGCGTGGAGCACTC 1628
1651 ----+----*----+----*----+----*----+----*----+----* 1700
msh04044 1061 .................................................. 1061
sj08554 1629 ACCGCAGCCTAAGCTGGGATCCCAGCTCAGAGGTCAGGCCATGTTGGGAT 1678
1701 ----+----*----+----*----+----*----+----*----+----* 1750
msh04044 1061 .................................................. 1061
sj08554 1679 GTTTAGGGAAGGTGATGCATTATCAGGAGACATATCTACTGTCCCCTGCC 1728
1751 ----+----*----+----*----+----*----+----*----+----* 1800
msh04044 1061 ..............ATTGATCTGGAGAACATTGTATACTACAAAGACGAG 1096
|||||||||||||||||||| |||||||| |||||
sj08554 1729 CTGTACCCCCAGGCATTGATCTGGAGAACATTGTGTACTACAAGGACGAC 1778
1801 ----+----*----+----*----+----*----+----*----+----* 1850
msh04044 1097 ACCCACTACTTTGTGATGACAGCCAAGAAGCAGTGCCTGCTGAGGCTGGG 1146
|||||||||||||||||||||||||||||||||||||||||| |||||||
sj08554 1779 ACCCACTACTTTGTGATGACAGCCAAGAAGCAGTGCCTGCTGCGGCTGGG 1828
1851 ----+----*----+----*----+----*----+----*----+----* 1900
msh04044 1147 GGTGCTGCGCCAGGACTTGTCAGAGACTGATCAGCTGCTGGGCAAAGCTA 1196
||||||||||||||||| | |||| || ||| ||||||||||| || |
sj08554 1829 GGTGCTGCGCCAGGACTGGCCAGACACCAATCGGCTGCTGGGCAGTGCCA 1878
1901 ----+----*----+----*----+----*----+----*----+----* 1950
msh04044 1197 ATGTGGTACCGGAGGCTCTGCAGCGCTTTGCCAGAGCAGCGGCTGACTTC 1246
||||||| || |||||||||||||||||| || | ||||| ||||||||
sj08554 1879 ATGTGGTGCCCGAGGCTCTGCAGCGCTTTACCCGGGCAGCTGCTGACTTT 1928
1951 ----+----*----+----*----+----*----+----*----+----* 2000
msh04044 1247 GCCACACATGGCAAGCTTGGGAAACTGGAGTTTGCTCAGGATGCACGCGG 1296
||||| ||||||||||| |||||||| |||||||| |||||||| | ||
sj08554 1929 GCCACCCATGGCAAGCTCGGGAAACTAGAGTTTGCCCAGGATGCCCATGG 1978
2001 ----+----*----+----*----+----*----+----*----+----* 2050
msh04044 1297 GCGGCCTGATGTGGCGGCCTTCGACTTCACAAGCATGATGCGGGCAGAGA 1346
|| ||||||||| | ||||| |||||||| |||||||||||||||||||
sj08554 1979 GCAGCCTGATGTCTCTGCCTTTGACTTCACGAGCATGATGCGGGCAGAGA 2028
2051 ----+----*----+----*----+----*----+----*----+----* 2100
msh04044 1347 GTTCCGCTCGTGTCCAAGAAAAGCATGGTGCTCGCCTACTGCTGGGGCTG 1396
|||| |||||||| ||||| |||||||| || ||||| |||||||| |||
sj08554 2029 GTTCTGCTCGTGTGCAAGAGAAGCATGGCGCCCGCCTGCTGCTGGGACTG 2078
2101 ----+----*----+----*----+----*----+----*----+----* 2150
msh04044 1397 GTGGGGGACTGCCTAGTGGAGCCCTTCTGGCCTCTGGGCACTGGAGTAGC 1446
|||||||||||||| ||||||||||||||||| |||||||||||||| ||
sj08554 2079 GTGGGGGACTGCCTGGTGGAGCCCTTCTGGCCCCTGGGCACTGGAGTGGC 2128
2151 ----+----*----+----*----+----*----+----*----+----* 2200
msh04044 1447 CCGAGGCTTCTTGGCAGCCTTCGATGCAGCCTGGATGGTGAAGCGGTGGG 1496
|| |||||| |||||||||| ||||||||||||||||||||||||||||
sj08554 2129 ACGGGGCTTCCTGGCAGCCTTTGATGCAGCCTGGATGGTGAAGCGGTGGG 2178
2201 ----+----*----+----*----+----*----+----*----+----* 2250
msh04044 1497 CAGAGGGCGCTGGGCCGCTAGAGGTGTTGGCTGAACGCGAGAGCTTGTAC 1546
|||||||||||| | | ||||||||||||||||| || |||||| |||||
sj08554 2179 CAGAGGGCGCTGAGTCCCTAGAGGTGTTGGCTGAGCGTGAGAGCCTGTAC 2228
2251 ----+----*----+----*----+----*----+----*----+----* 2300
msh04044 1547 CAGCTTCTGTCACAAACATCCCCCGAGAATATGCATCGAAATGTAGCCCA 1596
|||||||||||||| |||||||| || || |||||||| ||||| |||||
sj08554 2229 CAGCTTCTGTCACAGACATCCCCAGAAAACATGCATCGCAATGTGGCCCA 2278
2301 ----+----*----+----*----+----*----+----*----+----* 2350
msh04044 1597 GTATGGGTTGGACCCTGCCACCCGATACCCCAACCTGAACCTCCGGGCTG 1646
||||||| ||||||| |||||||| ||||||||||||||||||||||| |
sj08554 2279 GTATGGGCTGGACCCAGCCACCCGCTACCCCAACCTGAACCTCCGGGCAG 2328
2351 ----+----*----+----*----+----*----+----*----+----* 2400
msh04044 1647 TAACCCCCAATCAGGTACAGGACCTCTATGATATGATGGACAAGGAGCAT 1696
| ||||||||||| | |||||||| |
sj08554 2329 TGACCCCCAATCA.........................GCCAAGGAGCCT 2353
2401 ----+----*----+----*----+----*----+----*----+----* 2450
msh04044 1697 GCTCAGAGGAAGAGTGACGAGCCGGATTCCAGGAAGACAACCACAGG... 1743
| |||||||| | ||| || | ||| | ||| | || |||| ||
sj08554 2354 GTGCAGAGGAACAACGACAAGACAGATACAGGGATGCCAGCCACCGGTGA 2403
2451 ----+----*----+----*----+----*----+----*----+----* 2500
msh04044 1744 .................................................. 1744
sj08554 2404 GCAGGCCTTCCTCCCAAGGGGTGACCAAAATATGTACTACCCAGCGAGGC 2453
P K Y V L P S E A
2501 ----+----*----+----*----+----*----+----*----+----* 2550
msh04044 1744 .................................................. 1744
sj08554 2454 CCAGGTGGTCCCTGCAAAGCAGCTGCAGCCTCAGGACAGGAGCAGCGTGC 2503
Q V V P A K Q L Q P Q D R S S V P
2551 ----+----*----+----*----+----*----+----*----+----* 2600
S A G - E E L L H W C
msh04044 1744 .............GTCCGCAGGCAC...GGAGGAGCTTCTGCACTGGTGC 1777
|| || ||||| ||||||||| || | |||||||
sj08554 2504 CGGAGCACTCATTGTTGGCTGGCACCCAGGAGGAGCTGCTACGCTGGTGC 2553
E H S L L A G T Q E E L L R W C
2601 ----+----*----+----*----+----*----+----*----+----* 2650
Q E Q T A G F P G V H V T D F S S
msh04044 1778 CAGGAGCAGACAGCTGGCTTTCCTGGAGTCCATGTCACTGACTTTTCTTC 1827
||||||||||||||||| | || |||||||| ||| | || || |||||
sj08554 2554 CAGGAGCAGACAGCTGGGTACCCGGGAGTCCACGTCTCCGATTTGTCTTC 2603
Q E Q T A G Y P G V H V S D L S S
2651 ----+----*----+----*----+----*----+----*----+----* 2700
S W A D G L A L C A L V H H L Q P
msh04044 1828 CTCGTGGGCTGATGGGCTAGCTCTGTGTGCCCTGGTACACCACCTACAGC 1877
||| |||||||||||||||||||||||||||||||| ||| || ||||
sj08554 2604 CTCCTGGGCTGATGGGCTAGCTCTGTGTGCCCTGGTGTACCGGCTGCAGC 2653
S W A D G L A L C A L V Y R L Q P
2701 ----+----*----+----*----+----*----+----*----+----* 2750
G L L E P S E L Q G M G A L E A
msh04044 1878 CTGGCCTGCTGGAACCCTCGGAGCTGCAGGGCATGGGAGCTCTAGAAGCC 1927
||||||||||||||||||| ||||||||||| |||||||||| |||||
sj08554 2654 CTGGCCTGCTGGAACCCTCAGAGCTGCAGGGGCTGGGAGCTCTGGAAGCA 2703
G L L E P S E L Q G L G A L E A
2751 ----+----*----+----*----+----*----+----*----+----* 2800
T T W A L R V A E H E L G I T P V
msh04044 1928 ACTACCTGGGCACTGAGGGTGGCAGAACATGAGCTAGGCATCACACCAGT 1977
||| | |||||||| | ||||||||| ||||||| ||||||||||| ||
sj08554 2704 ACTGCTTGGGCACTAAAGGTGGCAGAGAATGAGCTGGGCATCACACCGGT 2753
T A W A L K V A E N E L G I T P V
2801 ----+----*----+----*----+----*----+----*----+----* 2850
L S A Q A V M A G S D P L G L I A
msh04044 1978 GTTGTCTGCACAGGCAGTCATGGCTGGCAGTGACCCACTGGGTCTCATTG 2027
| ||||||||||||| || | || || |||||||||||||| |||||||
sj08554 2754 GGTGTCTGCACAGGCCGTGGTAGCAGGGAGTGACCCACTGGGCCTCATTG 2803
V S A Q A V V A G S D P L G L I A
2851 ----+----*----+----*----+----*----+----*----+----* 2900
Y L S H F H S A F K N T S H S S
msh04044 2028 CCTACCTCAGCCACTTCCACAGTGCCTTCAAGAACACGAGCCACAGCTCA 2077
||||||||||||||||||||||||||||||||| || | ||||||| ||
sj08554 2804 CCTACCTCAGCCACTTCCACAGTGCCTTCAAGAGCATGGCCCACAGCCCA 2853
Y L S H F H S A F K S M A H S P
2901 ----+----*----+----*----+----*----+----*----+----* 2950
G L V S Q P - G T P S A I L F L
msh04044 2078 GGCCTTGTCAGCCAGCCCT...CTGGAACCCCCAGTGCTATACTTTTCCT 2124
|||| |||||||||| ||| | || ||| |||||||| || | |||||
sj08554 2854 GGCCCTGTCAGCCAGGCCTCCCCAGGGACCTCCAGTGCTGTATTATTCCT 2903
G P V S Q A S P G T S S A V L F L
2951 ----+----*----+----*----+----*----+----*----+----* 3000
G K L Q R S L Q R T R A K -
msh04044 2125 TGGCAAACTCCAGAGGAGCCTACAACGGACCCGCGCCAAGG......... 2165
| | ||||| ||||||| ||| || || |||| |||||||
sj08554 2904 TAGTAAACTTCAGAGGACCCTGCAGCGATCCCGGGCCAAGGAAAATGCAG 2953
S K L Q R T L Q R S R A K E N A E
3001 ----+----*----+----*----+----*----+----*----+----* 3050
D E E T P
msh04044 2166 .................................TAGACGAGGAGACTCCG 2182
| || | ||||| ||
sj08554 2954 AGGATGCTGGTGGCAAGAAGCTGCGCTTGGAGATGGAGGCCGAGACCCCA 3003
D A G G K K L R L E M E A E T P
3051 ----+----*----+----*----+----*----+----*----+----* 3100
S T E E P P V S E P S M S P N T P
msh04044 2183 AGCACTGAGGAGCCGCCTGTCTCCGAGCCCAGTATGTCTCCAAACACTCC 2232
|| ||||||| ||| |||| | | ||||| || | | | | | ||
sj08554 3004 AGTACTGAGGTGCCACCTGACCCAGAGCCTGGTGTACCCCTGACACCCCC 3053
S T E V P P D P E P G V P L T P P
3101 ----+----*----+----*----+----*----+----*----+----* 3150
S E H Q E A G A E E L C E L C
msh04044 2233 AGAGCTCTCTGAACACCAGGAGGCTGGGGCAGAGGAGCTGTGTGAACTCT 2282
| || ||||||||||||| || || | ||| ||||||| ||| |
sj08554 3054 A......TCCCAACACCAGGAGGCCGGTGCTGGGGACCTGTGTGCACTTT 3097
S Q H Q E A G A G D L C A L C
3151 ----+----*----+----*----+----*----+----*----+----* 3200
G K H L Y I L E R F C V D G H F
msh04044 2283 GTGGGAAACATCTGTACATCCTAGAACGCTTCTGTGTGGATGGCCATTTC 2332
||||| |||| || || |||| |||||| ||||||| | |||||||||
sj08554 3098 GTGGGGAACACCTCTATGTCCTGGAACGCCTCTGTGTCAACGGCCATTTC 3147
G E H L Y V L E R L C V N G H F
3201 ----+----*----+----*----+----*----+----*----+----* 3250
F H R S C F C C H T C E A T L W P
msh04044 2333 TTTCACCGGAGCTGCTTCTGCTGCCATACCTGTGAGGCCACATTGTGGCC 2382
|| ||||||||||||||| ||||||||||||||||||||||| |||||||
sj08554 3148 TTCCACCGGAGCTGCTTCCGCTGCCATACCTGTGAGGCCACACTGTGGCC 3197
F H R S C F R C H T C E A T L W P
3251 ----+----*----+----*----+----*----+----*----+----* 3300
G G Y G Q H P G D G H F Y C L Q H
msh04044 2383 AGGTGGCTATGGGCAACATCCAGGAGATGGACATTTCTACTGTCTCCAGC 2432
||||||||| | ||| || ||||||||||||||||||||||| |||||||
sj08554 3198 AGGTGGCTACGAGCAGCACCCAGGAGATGGACATTTCTACTGCCTCCAGC 3247
G G Y E Q H P G D G H F Y C L Q H
3301 ----+----*----+----*----+----*----+----*----+----* 3350
L P Q E D Q K E A D N N G S L E
msh04044 2433 ACCTACCCCAGGAGGACCAAAAGGAGGCTGACAACAATGGAAGTCTGGAG 2482
|||| |||||| ||||| || | || | || | || || | | |||
sj08554 3248 ACCTGCCCCAGACAGACCACAAAGCGGAAGGCAGCGATAGAGGCCCTGAG 3297
L P Q T D H K A E G S D R G P E
3351 ----+----*----+----*----+----*----+----*----+----* 3400
S Q E L P T P G D S N M Q P D P S
msh04044 2483 AGCCAGGAGCTCCCAACACCAGGAGACAGCAACATGCAGCCAGACCCCTC 2532
|| | ||||||||| |||||| | || | | ||||| |||| || |||
sj08554 3298 AGTCCGGAGCTCCCCACACCAAGTGAGAATAGCATGCCACCAGGCCTCTC 3347
S P E L P T P S E N S M P P G L S
3401 ----+----*----+----*----+----*----+----*----+----* 3450
S P P - T R V S P V P S P S Q
msh04044 2533 CTCTCCTCCTG......TGACGAGGGTCAGCCCTGTCCCAAGCCCCAGCC 2576
|||| | | | | ||| | | ||||| ||| |||||||
sj08554 3348 AACTCCCACAGCCTCGCAGGAGGGGGCCGGTCCTGTTCCAGATCCCAGCC 3397
T P T A S Q E G A G P V P D P S Q
3451 ----+----*----+----*----+----*----+----*----+----* 3500
P A R R L I R L S S L E R L R L
msh04044 2577 AGCCTGCACGTCGGCTGATCCGGCTCTCCAGTTTAGAACGCCTACGGCTG 2626
|||| | ||||||| |||||| |||||||| || |||| ||| ||
sj08554 3398 AGCCCACCCGTCGGCAGATCCGCCTCTCCAGCCCGGAGCGCCAGCGGTTG 3447
P T R R Q I R L S S P E R Q R L
3501 ----+----*----+----*----+----*----+----*----+----* 3550
S S L N I I P D S G A E P P P K P
msh04044 2627 TCCTCCCTGAATATCATCCCTGACTCAGGAGCGGAGCCTCCTCCCAAACC 2676
|||||||| || | | ||||||| | | | ||||||||| ||||| ||
sj08554 3448 TCCTCCCTTAACCTTACCCCTGACCCGGAAATGGAGCCTCCACCCAAGCC 3497
S S L N L T P D P E M E P P P K P
3551 ----+----*----+----*----+----*----+----*----+----* 3600
P R S C S D L A R E S L K S S F V
msh04044 2677 CCCAAGGAGCTGCTCAGACTTGGCCCGAGAATCCCTGAAGAGCAGCTTTG 2726
|| | |||||||| | ||||||||| | ||||| ||||||||||||
sj08554 3498 TCCCCGCAGCTGCTCCGCCTTGGCCCGCCACGCCCTGGAGAGCAGCTTTG 3547
P R S C S A L A R H A L E S S F V
3601 ----+----*----+----*----+----*----+----*----+----* 3650
G W G V P V Q A P Q V P E A I E
msh04044 2727 TGGGCTGGGGTGTGCCAGTCCAAGCACCACAAGTTCCTGAAGCCATAGAG 2776
|||||||||| |||||||||| || |||| || || ||||| |||
sj08554 3548 TGGGCTGGGGCCTGCCAGTCCAGAGCCCTCAAGCTCTTGTGGCCATGGAG 3597
G W G L P V Q S P Q A L V A M E
3651 ----+----*----+----*----+----*----+----*----+----* 3700
K G D D E E E E E E E E E E E E E
msh04044 2777 AAAGGGGATGATGAGGAGGAGGAAGAGGAAGAAGAGGAGGAGGAGGAGGA 2826
|| | ||| | ||| |||||||| || || || |
sj08554 3598 AAGGAGGAAAAAGAGAGTCCCTTCTCCAGTGAAGAGGAAGAAGAAGATGT 3647
K E E K E S P F S S E E E E E D V
3701 ----+----*----+----*----+----*----+----*----+----* 3750
P L E P E L E Q T L L T L A
msh04044 2827 GCCACTGCCACCTTTGGAGCCAGAGTTGGAGCAGACTCTGCTGACCTTGG 2876
| |||||||| |||| |||| ||| | |||| |||||| |
sj08554 3648 G.........CCTTTGGACTCAGATGTGGAACAGGCCCTGCAGACCTTTG 3688
P L D S D V E Q A L Q T F A
3751 ----+----*----+----*----+----*----+----*----+----* 3800
K N P G A M T K Y P T W R R T L
msh04044 2877 CCAAGAACCCAGGTGCCATGACTAAGTACCCAACGTGGCGTCGAACCCTC 2926
|||||| | |||| |||||| ||| |||||||| |||||||| || ||
sj08554 3689 CCAAGACCTCAGGCACCATGAATAACTACCCAACATGGCGTCGGACTCTG 3738
K T S G T M N N Y P T W R R T L
3801 ----+----*----+----*----+----*----+----*----+----* 3850
M R R A K E E E M K R F C K A Q A
msh04044 2927 ATGCGCCGTGCCAAAGAGGAGGAGATGAAGAGGTTTTGCAAGGCCCAGGC 2976
|||||||||| || |||||||||||||||||||| |||||||||||| |
sj08554 3739 CTGCGCCGTGCGAAGGAGGAGGAGATGAAGAGGTTCTGCAAGGCCCAGAC 3788
L R R A K E E E M K R F C K A Q T
3851 ----+----*----+----*----+----*----+----*----+----* 3900
I Q R R L N E I E A T M R E L E A
msh04044 2977 CATCCAGCGAAGACTGAACGAGATTGAGGCCACTATGCGGGAGCTGGAGG 3026
|||||| || |||| || ||||||||||| | || ||||||| ||||
sj08554 3789 CATCCAACGGCGACTAAATGAGATTGAGGCTGCCTTGAGGGAGCTAGAGG 3838
I Q R R L N E I E A A L R E L E A
3901 ----+----*----+----*----+----*----+----*----+----* 3950
E G T K L E L A L R K E S S S P
msh04044 3027 CCGAAGGCACGAAGCTGGAGCTGGCCTTGAGGAAAGAGAGTAGCTCTCCA 3076
|||| ||| ||||||||||||| |||||||| |||| || || |||
sj08554 3839 CCGAGGGCGTGAAGCTGGAGCTGCCCTTGAGGCGCCAGAGCAGTTCCCCA 3888
E G V K L E L P L R R Q S S S P
3951 ----+----*----+----*----+----*----+----*----+----* 4000
E Q Q K K L W L D Q L L R L I Q K
msh04044 3077 GAACAGCAGAAGAAACTCTGGCTGGATCAGCTGCTACGGCTCATTCAGAA 3126
|||||||| |||||||| ||| | | |||||||||| |||| || | ||
sj08554 3889 GAACAGCAAAAGAAACTATGGGTAGGACAGCTGCTACAGCTCGTTGACAA 3938
E Q Q K K L W V G Q L L Q L V D K
4001 ----+----*----+----*----+----*----+----*----+----* 4050
K N S L V T E E A E L M I T V Q E
msh04044 3127 GAAGAACAGCCTAGTGACTGAAGAGGCCGAGCTCATGATCACGGTGCAGG 3176
||| |||||||| ||| |||| ||||||||||||||||||||||||||||
sj08554 3939 GAAAAACAGCCTGGTGGCTGAGGAGGCCGAGCTCATGATCACGGTGCAGG 3988
K N S L V A E E A E L M I T V Q E
4051 ----+----*----+----*----+----*----+----*----+----* 4100
L D L E E K Q R Q L D H E L R G
msh04044 3177 AGCTGGATCTGGAAGAGAAGCAGCGGCAGCTAGACCACGAGTTGCGGGGC 3226
| || ||||||| ||||| ||| ||||||| ||||| ||| | || |||
sj08554 3989 AATTGAATCTGGAGGAGAAACAGTGGCAGCTGGACCAGGAGCTACGAGGC 4038
L N L E E K Q W Q L D Q E L R G
4101 ----+----*----+----*----+----*----+----*----+----* 4150
Y M N R E E T M K T E A D L Q S E
msh04044 3227 TACATGAATCGGGAAGAAACTATGAAGACAGAGGCCGACCTGCAGTCTGA 3276
|||||||| |||||||||| | ||||||| || || | |||| ||||
sj08554 4039 TACATGAACCGGGAAGAAAACCTAAAGACAGCTGCTGATCGGCAGGCTGA 4088
Y M N R E E N L K T A A D R Q A E
4151 ----+----*----+----*----+----*----+----*----+----* 4200
N Q V L R K L L E V V N Q R D A L
msh04044 3277 GAACCAGGTCCTAAGGAAGCTGTTGGAGGTGGTGAACCAGCGGGATGCTC 3326
| |||||||||| ||||||||| |||| |||| |||||| | ||||| |
sj08554 4089 GGACCAGGTCCTGAGGAAGCTGGTGGATTTGGTCAACCAGAGAGATGCCC 4138
D Q V L R K L V D L V N Q R D A L
4201 ----+----*----+----*----+----*----+----*----+----* 4250
I Q F Q E E R R L R E M P A * M
msh04044 3327 TGATCCAATTCCAGGAGGAACGGAGGCTCAGAGAGATGCCTGCATAGATG 3376
| |||| ||||||||||| || |||||||| ||| || | ||
sj08554 4139 TCATCCGCTTCCAGGAGGAGCGCAGGCTCAGCGAGCTGGCCTTGGGGACA 4188
I R F Q E E R R L S E L A L G T
4251 ----+----*----+----*----+----*----+----*----+----* 4300
G A Q G *
msh04044 3377 GGAGCCCAGGGCTAGAAGATGATGGTTAG.CTGCCTCCCTGCCCCGTAAG 3425
|| ||||||||||||| || | ||| | |||| | | | ||| |||
sj08554 4189 GGGGCCCAGGGCTAGACGAGGGTGGGCCGTCTGCTTTCGTTCCCACAAAG 4238
G A Q G *
4301 ----+----*----+----*----+----*----+----*----+----* 4350
msh04044 3426 CAAGACACCATCACAAGGGCTGTACCTCCGC....CATCTGGACTGCTTA 3471
||| | | | || | || || || | ||||||| |||| |
sj08554 4239 AAAGCACCTCACCCCAGCACAGTGCCACCCCTGTTCATCTGGGCTGCCTG 4288
4351 ----+----*----+----*----+----*----+----*-- 4392
msh04044 3472 GTCAGAGGCTTCGTTGTTTACAATAAAAGGATTATGACCATG 3513
| || | | |||||||||| ||| || |||
sj08554 4289 GCAGAGAGCCTTGCTGTTTACAATTAAAATGTTTCTGCCAC. 4329