Comparison of KIAA cDNA sequences between mouse and human (FLJ00331)
<<Original sequence data>>
mouse mFLJ00331 (msh02335) length: 3112 bp, CDS: 2 - 625
human (sj03430) length: 4296 bp, CDS: 1855 - 2196
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 115 - 1856 641 177 21.6
CDS: 1857 - 1607 0 0 0.0
3'UTR: 1608 - 4449 1231 1148 48.3
amino acid
CDS: 1857 - 1607 0 0 0.0
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
msh02335 1 .................................................. 1
sj03430 1 CCAGGTTGGTCTCAAACTCCTGAGCCCAAGTGATCCACCTACCTTGGTCT 50
51 ----+----*----+----*----+----*----+----*----+----* 100
msh02335 1 .................................................. 1
sj03430 51 CGCAAAGTGCCTGGATTATAGGTGTGAGCTGCCACGCCCAGGCTTGTTTT 100
101 ----+----*----+----*----+----*----+----*----+----* 150
msh02335 1 ..............GCCATGGATA.......................... 10
||||| | ||
sj03430 101 TCTTAATAGTCCCTGCCATCGTTAGGTAGTGGGTTGATTGTCCTGCCTCA 150
151 ----+----*----+----*----+----*----+----*----+----* 200
msh02335 11 .................................................. 11
sj03430 151 CTAGAGTATAAGTTCAGCAGGACAGGGACCTGTGTCTCGTTCACTGCTGT 200
201 ----+----*----+----*----+----*----+----*----+----* 250
msh02335 11 .................................................. 11
sj03430 201 GCTCCAGTGTGTGGGACAAGCCCAGCCACCAAGTCAGCTCTCCGTTCTGT 250
251 ----+----*----+----*----+----*----+----*----+----* 300
msh02335 11 .................................................. 11
sj03430 251 GTTGTCTGTCTTCCGTGTGAGTGAGTATGTGCCTGTGTGAGTGCACACAG 300
301 ----+----*----+----*----+----*----+----*----+----* 350
msh02335 11 .................................................. 11
sj03430 301 ACGTGCCCATTCGCCTAGCCCTTGACTGGGAGGGTGTTGGGGTCAGAGTG 350
351 ----+----*----+----*----+----*----+----*----+----* 400
msh02335 11 ...CCAGCGACTTGTTTGCCAGCTGCAGGAAAGGGGACGTGGGCCGTGTG 57
|||| | | | | || | | || | | || ||||
sj03430 351 GGCCCAGGGTAATTTGGGAAGGCATCGCCAGAGATTCGGAGCCCCATGTG 400
401 ----+----*----+----*----+----*----+----*----+----* 450
msh02335 58 CGGTACCTGCTGGAGCAGCGAGACGTGGAGGTACTATGCCTGCCTCTGTG 107
|| | |||| || || | | || | || |
sj03430 401 TGGGAAGGTGGGGAGGAGGGACAGGGAGATTAGAATTTCCCCCAGGCCCC 450
451 ----+----*----+----*----+----*----+----*----+----* 500
msh02335 108 GGCATGAGGAGTTGGTGCGCTACCTGTTGGCTAATGGAGCCCGCTGTGAG 157
| | ||||| || |||| | |||||||| || |||
sj03430 451 TTCCCTGCTAACTGGTGAGC..CCTGCCTCCCCCAGGAGCCCGTTGCGAG 498
501 ----+----*----+----*----+----*----+----*----+----* 550
msh02335 158 GCCAACACCTTTGATGGAGAGCGGTGTCTCTACGGAGCGCTAAGCGACCC 207
||||||||||| ||||| ||||| || ||||| || || || || |||||
sj03430 499 GCCAACACCTTCGATGGTGAGCGCTGCCTCTATGGGGCACTGAGTGACCC 548
551 ----+----*----+----*----+----*----+----*----+----* 600
msh02335 208 TATTCGCCGTGCACTGAGAGACTACAAACAGGTCACTGCGTCCTGCAGGA 257
|| ||||| || || | || ||||| |||||||| || ||||||||||
sj03430 549 CATCCGCCGGGCTCTACGCGATTACAAGCAGGTCACGGCTTCCTGCAGGA 598
601 ----+----*----+----*----+----*----+----*----+----* 650
msh02335 258 GGCGGGATTACTATGACGATTTCCTGCAGC.................... 287
||||||||||||||||||| ||| ||||||
sj03430 599 GGCGGGATTACTATGACGACTTCTTGCAGCGGTGAGCCAGGGCACACGAG 648
651 ----+----*----+----*----+----*----+----*----+----* 700
msh02335 288 .................................................. 288
sj03430 649 GGGTGCAGCATGGGGTGCGGTGGCCCTGGTGGGTGTGGCGAGTCTGCTCT 698
701 ----+----*----+----*----+----*----+----*----+----* 750
msh02335 288 .................................................. 288
sj03430 699 GACTGTGGCCTGCACTGGGTTCTGAGTGCTCCGAGGAATGGGGTGGGGCT 748
751 ----+----*----+----*----+----*----+----*----+----* 800
msh02335 288 .....................................GGCTTCTGGAACA 300
||||||| || ||
sj03430 749 GTGCCAAGTATCCTCCCTCCTGGCTTGTCCCTCCCCAGGCTTCTAGAGCA 798
801 ----+----*----+----*----+----*----+----*----+----* 850
msh02335 301 GGGCATCCACAGCGATGTGGTCTTTGTGGTACACGGAAAGCCGTTCCGGG 350
|||||||||||| || ||||||||||| |||||||| ||||| |||||||
sj03430 799 GGGCATCCACAGTGACGTGGTCTTTGTAGTACACGGGAAGCCATTCCGGG 848
851 ----+----*----+----*----+----*----+----*----+----* 900
msh02335 351 CCCATCGCTGTATCCTCGGTGCTCGCAGTACCTACTTCGCCAACATGCTG 400
|||||||| |||| ||||| || ||| ||||||| ||||||||||||
sj03430 849 TGCATCGCTGCGTCCTGGGTGCACGTAGTGCCTACTTTGCCAACATGCTG 898
901 ----+----*----+----*----+----*----+----*----+----* 950
msh02335 401 GACACCAAGTGGAAGGGCAAGAGCGTCGTGGTTCTCAGGCACCCCCTGAT 450
|||||||| |||||||||||||| |||||||||||||||||||| |||||
sj03430 899 GACACCAAATGGAAGGGCAAGAGTGTCGTGGTTCTCAGGCACCCACTGAT 948
951 ----+----*----+----*----+----*----+----*----+----* 1000
msh02335 451 CAACCCGGTGGCCTTTGGGGCTCTACTGCAGTACCTGTATA......... 491
|||||| |||||||||||||| || |||||||||||||| |
sj03430 949 CAACCCCGTGGCCTTTGGGGCCCTGCTGCAGTACCTGTACACAGGTGACC 998
1001 ----+----*----+----*----+----*----+----*----+----* 1050
msh02335 492 .................................................. 492
sj03430 999 CCCTGGGTCCAGGGTAGGAGGAGAGGGAGTGGGCCGTCCTTCTGGACAGC 1048
1051 ----+----*----+----*----+----*----+----*----+----* 1100
msh02335 492 .................................................. 492
sj03430 1049 AGTACACCTAGGTGTGGCTGGGCTGACCTTTCACCTCTAGACACTTCATG 1098
1101 ----+----*----+----*----+----*----+----*----+----* 1150
msh02335 492 .................................................. 492
sj03430 1099 GTCCCCCCGGGGTGGTTCCAGCTGCCTCTCGGGTTGGGTTGCAAGAGAGA 1148
1151 ----+----*----+----*----+----*----+----*----+----* 1200
msh02335 492 .................................................. 492
sj03430 1149 GGACTAGTGTGCCTGCTCAGGAAGAGCTTGTCCCACCCACATGCTGAGGC 1198
1201 ----+----*----+----*----+----*----+----*----+----* 1250
msh02335 492 .................................................. 492
sj03430 1199 CCTCCCATCTGTTCCCTGGGGCCTGTAGAACAGCTTTTGATGGGGAAACC 1248
1251 ----+----*----+----*----+----*----+----*----+----* 1300
msh02335 492 .................................................. 492
sj03430 1249 ATGGTGGCAAGTGGGCCCAGGAGTCCTAGTCCTGCAGCCAGGTGGCCAGG 1298
1301 ----+----*----+----*----+----*----+----*----+----* 1350
msh02335 492 .................................................. 492
sj03430 1299 TGGGAGGGGATCACCCTTTTTCTGTGGGCCTGATGACAGCTGAGGTCCCG 1348
1351 ----+----*----+----*----+----*----+----*----+----* 1400
msh02335 492 ..........................CAGGCCGCTTGGACATCGGTGTAG 515
|||||||| ||||||| || ||||
sj03430 1349 CAGGCCCTCATCCTCCCCACTGCCCCCAGGCCGCCTGGACATTGGCGTAG 1398
1401 ----+----*----+----*----+----*----+----*----+----* 1450
msh02335 516 AACACGTGAGTGACTGTGAGCGCCTGGCCAAGCAGTGCCAGCTGTGGGAC 565
| || ||||||||||||||||||||||||||||| |||||||||||||||
sj03430 1399 AGCATGTGAGTGACTGTGAGCGCCTGGCCAAGCAATGCCAGCTGTGGGAC 1448
1451 ----+----*----+----*----+----*----+----*----+----* 1500
msh02335 566 CTGCTGGATGACCTGGAGGCTAAGTGCGAGA................... 596
||||| ||||||||||| ||||||||||
sj03430 1449 CTGCTCAGCGACCTGGAGGCCAAGTGCGAGAAGGTGTCTGAGTTTGGTGC 1498
1501 ----+----*----+----*----+----*----+----*----+----* 1550
msh02335 597 .................................................. 597
sj03430 1499 GAGCAGGGTTTGGGGCCCGGGGCCATGGGTGCGGCCTGGCAGGGCTGGCC 1548
1551 ----+----*----+----*----+----*----+----*----+----* 1600
msh02335 597 ............................AGTGGCTTCCAAGCCTGGCACG 618
|||||| || ||||| ||||||
sj03430 1549 TGGCTCCCTGAAGTTGTTCTTCCCCTGTAGTGGCGTCTAAGCCAGGCACG 1598
1601 ----+----*----+----*----+----*----+----*----+----* 1650
msh02335 619 TGTGTGAAGGTGCTGACTATTGAACCTCCTCCAGCAGATCCCCGGTTACG 668
||||||||||||||||| || || || || || ||||| ||||| | ||
sj03430 1599 TGTGTGAAGGTGCTGACCATCGAGCCCCCACCTGCAGACCCCCGCCTCCG 1648
1651 ----+----*----+----*----+----*----+----*----+----* 1700
msh02335 669 GGCAGATATGGCCCTGCTAGCTGACTGTGCCCTGCCATCTGAGCTGCGGG 718
|| || ||||| ||||| || || ||||||||||| | ||||| || |
sj03430 1649 GGAGGACATGGCGCTGCTGGCCGATTGTGCCCTGCCCCCCGAGCTCCGAG 1698
1701 ----+----*----+----*----+----*----+----*----+----* 1750
msh02335 719 GTGACCTTGGAGAGCTGCCCTTCCCATGTCCCGATGGCTTCAGCAGCTGC 768
|||| ||| | |||||||||||||| ||||| || ||||||| |||||||
sj03430 1699 GTGATCTTTGGGAGCTGCCCTTCCCTTGTCCTGACGGCTTCAACAGCTGC 1748
1751 ----+----*----+----*----+----*----+----*----+----* 1800
msh02335 769 CCCGATATCTGCTTCCGAGTGGCTGACTCCAGCTTCCTCTGCCACA.... 814
|| || ||||||||||||||||||| || |||||||||||||||||
sj03430 1749 CCTGACATCTGCTTCCGAGTGGCTGGCTGCAGCTTCCTCTGCCACAAGGT 1798
1801 ----+----*----+----*----+----*----+----*----+----* 1850
msh02335 815 .................................................. 815
sj03430 1799 GCCTGTGCCCTCCTGTTGCCCCTGGCCCCAGCCCGTTGCCCTGAGCCCCC 1848
1851 ----+----*----+----*----+----*----+----*----+----* 1900
msh02335 815 .................................................. 815
sj03430 1849 GTCTAGCTCCTCAGGAGACAGACCCTGGCCCTCACACTTCCTGAGCCCGG 1898
L L R R Q T L A L T L P E P G
1901 ----+----*----+----*----+----*----+----*----+----* 1950
A F F C G R S D Y F R A L L
msh02335 815 ........AGGCTTTCTTCTGTGGCCGCAGTGACTACTTCCGGGCCCTTC 856
|||| || |||||||||||||||||||||||||| ||||| |
sj03430 1899 CCTCCCCCAGGCCTTTTTCTGTGGCCGCAGTGACTACTTCCGAGCCCTGC 1948
L P Q A F F C G R S D Y F R A L L
1951 ----+----*----+----*----+----*----+----*----+----* 2000
D D H F Q E S E E P A A S G D P
msh02335 857 TGGATGACCACTTTCAAGAGAGTGAGGAGCCTGCAGCCTCTGGAGATCCC 906
||||||||||||| | |||||| |||||||| || |||| || | |||
sj03430 1949 TGGATGACCACTTCCGAGAGAGCGAGGAGCCAGCGACCTCAGGGGGCCCC 1998
D D H F R E S E E P A T S G G P
2001 ----+----*----+----*----+----*----+----*----+----* 2050
P V V T L H D I S P D I F I H V L
msh02335 907 CCAGTTGTCACCCTGCATGACATCTCCCCGGACATCTTCATTCACGTGTT 956
|||| ||||||||||||| |||||| || ||| |||||| ||||||| |
sj03430 1999 CCAGCCGTCACCCTGCATGGCATCTCACCCGACGTCTTCACTCACGTGCT 2048
P A V T L H G I S P D V F T H V L
2051 ----+----*----+----*----+----*----+----*----+----* 2100
Y Y V Y S D H T E V G A Q Q E
msh02335 957 GTACTACGTATATAGTGACCATACCGAGGTGAAGTGGCGCCCAGCAGGAG 1006
|||||| | || || ||||| || |||||| || || ||| |||
sj03430 2049 CTACTACATGTACAGCGACCACACTGAGGTG....GGGGCTCAGGCAGAG 2094
Y Y M Y S D H T E V G A Q A E
2101 ----+----*----+----*----+----*----+----*----+----* 2150
G S G E Q A L G C R S V
msh02335 1007 GGCAGTGGTGAACAAGCCCTGGGCCGTCTGCCGTAGTGTTGTCACAGTCC 1056
| | ||| |||| || |||||| | |
sj03430 2095 CTGGGGATGGCACACAACCTGTGC....TGCCGTGGGCT........... 2129
L G M A H N L C C R G L
2151 ----+----*----+----*----+----*----+----*----+----* 2200
S S * A R P V
msh02335 1057 TTGGGTCATTCCTGCACTTAGCTGTCCCAGAGTTCCTGAGCCAGGCCTGT 1106
||| | |||||| | |
sj03430 2130 .............................GAGAGGGAGCGCCAGGGCCCT 2150
R G S A R A L
2201 ----+----*----+----*----+----*----+----*----+----* 2250
G G F R Q Y Q R F P L L V C V
msh02335 1107 GGGTGGCTTTAGACAGTACCAAAGGTTCCCTCTGTTGGTATGTGTTCATG 1156
||| | || | || | ||| | ||| |||| | | | |
sj03430 2151 GGGGGTCTGTGGAAGGGCCCAGCTGGCCCCATGGTTGACGTTTTGAGAAG 2200
G V C G R A Q L A P W L T F *
2251 ----+----*----+----*----+----*----+----*----+----* 2300
msh02335 1157 GCAGTGTAGCAGGGCACTATACAGGAGAGAAGTGTATTTTCCATTGGGTC 1206
|| | | | ||| | | | ||| || |
sj03430 2201 GCTGGAGGGGAAGGCTGT.............GGGACTTTGGATTTTTCTT 2237
2301 ----+----*----+----*----+----*----+----*----+----* 2350
msh02335 1207 TGAGGGGTGAGGTGGCTTGCTGGGGTCCCAGGTGCCCCTTTGTCTGGTTT 1256
| ||| | | |||| |||| ||| | | | || |
sj03430 2238 TCAGGTAGAGGAAGCCTTGTTGGGCTCCAGAGAGAGGATGAGTGATG... 2284
2351 ----+----*----+----*----+----*----+----*----+----* 2400
msh02335 1257 TTCCAGGGCATTGCCACAAATCTTCCCTAGGAAGGTAATGTTTTAAGGCT 1306
| | || |||| | ||| | ||
sj03430 2285 .....AGCCTGTGTCACAGACACTCC...................ACACT 2310
2401 ----+----*----+----*----+----*----+----*----+----* 2450
msh02335 1307 GGTGGGCCATATGGTATTGTCAGGGCTGTTCAGCCTCCAGGAAAGGTCTT 1356
|| |||| ||| || ||| ||| || | ||| | |
sj03430 2311 TGTCAGCCACTTGGGATCCTCA..GCTTCTCTAGCAGGAGGGTGGAGGGT 2358
2451 ----+----*----+----*----+----*----+----*----+----* 2500
msh02335 1357 TGTAGAAATGGTGGCCCTGACCCCCAGGCTGTGGCTCCCCCATCCTCTTT 1406
| | ||| | |||| | |||| |||
sj03430 2359 GGGTGGGGACAGCCTCCTCTCTGTGGTGCTGCAGATCCCTGGGGTTCTGG 2408
2501 ----+----*----+----*----+----*----+----*----+----* 2550
msh02335 1407 GTTCTCTGT.TACTGAGATGGAACTACAGGAATCTGTGTCC..CTACATC 1453
|||| | || | || || | | ||||| ||| || | |
sj03430 2409 GTTCCCAGTCTCCTCTTCCCTTGCTGCCTGCCTCTGTCTCCAGCTGCCCC 2458
2551 ----+----*----+----*----+----*----+----*----+----* 2600
msh02335 1454 ATTTTCTGGTGACCCCAGTCCTGGCCATCTGGCTCCCACCAACCTGCCCC 1503
| |||| || | || | | | || || || |||
sj03430 2459 A.....AGGTGTCCGTAAGCCAAGGCTGCAGGGCAGCAGCAGAGTGCTGA 2503
2601 ----+----*----+----*----+----*----+----*----+----* 2650
msh02335 1504 CTCTGTATTAGGC.............................TTTGTCAC 1524
| | | || | |||
sj03430 2504 AGGTTTGCTCTGCCAGGGTGTGTGAGAGAGAGAGAGAGTGTGTGTGTGCG 2553
2651 ----+----*----+----*----+----*----+----*----+----* 2700
msh02335 1525 TAGCCTTCCTTCTGTCACTTCCCCTCACTTCCTTTCTCATGGCCTGCCAC 1574
| | | | || | | | | | | ||| | | |
sj03430 2554 TGCGCGTGCGCGTGCGCGCGCACTATAAAGCAATCCCCATATCTGGTGGC 2603
2701 ----+----*----+----*----+----*----+----*----+----* 2750
msh02335 1575 TCATTCTGAGGTTGAGTCTGAAATCCTGTGTCGCAAGCTCTCTCTGGAAG 1624
| | | ||| | ||| | || || ||
sj03430 2604 TTAAAGAAGAGGGGAG..........TTTGTTTCTCCTTCACTTCTGACT 2643
2751 ----+----*----+----*----+----*----+----*----+----* 2800
msh02335 1625 AAGCTTGGTACCCCAAGAACATTTTTAATAGCTCAGAGTGTGGACTGGCC 1674
|| | ||| ||||| | | | | || | | || | ||
sj03430 2644 GAGGTGGGTGCCCCAGGGCAA..GTGGCTTGCGGAAGATCAGGTCATCCC 2691
2801 ----+----*----+----*----+----*----+----*----+----* 2850
msh02335 1675 TCTGAACATTGTCAAACAGTAGATTAGTCTCGGGAGCTGTGTGATCTTAG 1724
|| ||| | | ||| | || | || |
sj03430 2692 TC....CATCTTGCCCCTGTA.......TGCCTAAGGGTGAAGGTCAAAA 2730
2851 ----+----*----+----*----+----*----+----*----+----* 2900
msh02335 1725 ACAAGTTATATCCCTGCTCTGTGTTTCAGTGTATTCCCCAGAAGATGGAG 1774
|| || | | | | ||||||||| | | | |
sj03430 2731 ACCTTTTCTCT.GAAGGTGAGTGTTTCAGGTTCTGTGGGCCATATGGCCC 2779
2901 ----+----*----+----*----+----*----+----*----+----* 2950
msh02335 1775 AATAGTATGTTTCCTTGAGTCTTGAGCATATGACCAAACGACCAGAGAAT 1824
| ||| | | | | | ||| | | | ||| |
sj03430 2780 TGTTGTAGCTACTCAACTCTGTAGCGCAAAGGTAGCCAGAGACAGTACAG 2829
2951 ----+----*----+----*----+----*----+----*----+----* 3000
msh02335 1825 AGTTAGGTGGCAGAG..TGACATCC...AGAAGTGTGGTGGCATAGTCCC 1869
|| | |||| ||| || ||| | || | | | ||| | |
sj03430 2830 AGATGAGTGGGTGAGGCTGCATTCCAATAAAACTTTACTTGCACAAACAG 2879
3001 ----+----*----+----*----+----*----+----*----+----* 3050
msh02335 1870 TCTATTTTTTTTTCCCCTCTGCTCAGTCCCTAGGCCACCCAAGGTCTGAA 1919
|| ||| | | ||| || ||| ||||| |
sj03430 2880 GCTGGATTT........GGTCCACAGGCCGTAGCTTACCCATCCT....G 2917
3051 ----+----*----+----*----+----*----+----*----+----* 3100
msh02335 1920 GCTGGATTCTTGACCTTAGCCAAGGCCTAGCAGTCTCCTCCTCAAACTTG 1969
|||| | | || |||| || | |||| ||||||
sj03430 2918 CCTGGGGCATCGCGTTTGGCCATGG..AGATTGCGTCCTAGGCAAACTCA 2965
3101 ----+----*----+----*----+----*----+----*----+----* 3150
msh02335 1970 TGTGGTCTTTCACAGTGGAAGGAGCCATTCCCAAGCTGTGGGCTGGAATA 2019
|| | || |||||| ||| |||| |
sj03430 2966 TGCTCTAGGAGGAAGAGGAAGGCAGGGCAAGCAA......TGCTGTTTTT 3009
3151 ----+----*----+----*----+----*----+----*----+----* 3200
msh02335 2020 GAAACCTCCAGCTCACTTTACTTTCTTTCAAGTCTTC............. 2056
| | ||| | | || | ||| | |||
sj03430 3010 GTAGAAGCCACCGGAAATTGCACCACTTCTCATGTTCCCCTGGAGAGAAC 3059
3201 ----+----*----+----*----+----*----+----*----+----* 3250
msh02335 2057 ..................CAAGGCTGGCATGAATCCTCTACAGATG.... 2084
||||| ||| || | || ||
sj03430 3060 TTCGTGCCTACCTGCCAACAAGGGAGGCTTGGAAAGTCATTCTGTGGCCA 3109
3251 ----+----*----+----*----+----*----+----*----+----* 3300
msh02335 2085 .............................AGGGGACTGAGATACAGAGGT 2105
|| ||| || ||||||
sj03430 3110 GGGCCCTGTTTTGTGGGGGAAGGGGAGGAAGCATGCTGGGAGACAGAG.. 3157
3301 ----+----*----+----*----+----*----+----*----+----* 3350
msh02335 2106 GAAGGGACTTGCCTGGGACCCCACAGCTGGATGGGGAGAGCTCAGGTCTA 2155
|| | | | | | | || | || || | | ||| |
sj03430 3158 ...GGCAGTCCCTACTGCTGCTCTATCTCCAGTGGCAGCTCCCTTGTCCA 3204
3351 ----+----*----+----*----+----*----+----*----+----* 3400
msh02335 2156 TGCCTGAGCCCACACTG.CTTTTCCTAAAAGGCCTGTAGTCCTAAGCACT 2204
| ||| || | ||| | ||| | || ||| | | ||
sj03430 3205 TCCCTCCGCGCGGCCTGACAGCCCCTCAGCCTCCATCTTTCCCACCCCCT 3254
3401 ----+----*----+----*----+----*----+----*----+----* 3450
msh02335 2205 GACTGAGGCATGGAACCCCCCTCTCCTGAGCTGATTCTGCCCCTTGCACC 2254
||||| | ||| | |||| |||| ||| || | |
sj03430 3255 CTACTGGGCATCTCCTGCAGCTCAGCCCAGCT..CTCTGGCCCCTGTAGC 3302
3451 ----+----*----+----*----+----*----+----*----+----* 3500
msh02335 2255 CCCAAAGACCTGGGCC...........................AGGCTCC 2277
|||| ||| || |||
sj03430 3303 AGGGGTTACCTTTGCCCACCCTGGAGAAGCTCCCTCTTCAAGGAGCCTCG 3352
3501 ----+----*----+----*----+----*----+----*----+----* 3550
msh02335 2278 AGAGATGTGAGTCTCTTGTATTTCCACTGGGGTTTCCTCCCTGGACCCTG 2327
| | | | | | | || || || | || ||| |
sj03430 3353 CCACCCAAAGGGCACCTTGTCTCAGAGTGTGGCTTGGGCTCTTAACCTGG 3402
3551 ----+----*----+----*----+----*----+----*----+----* 3600
msh02335 2328 GGAGCCCTTGATGATCCCCTGTGTC.....CTGTTGTCCCTTTTCGTGTC 2372
| | || | | |||| | || | | || ||
sj03430 3403 GTTGATACTGGTTGAGCTGTGTGACACTGGGTGAGCTTTGTGATCTTGGG 3452
3601 ----+----*----+----*----+----*----+----*----+----* 3650
msh02335 2373 ACAGCTGCCT.CCTGAGTTGGCCTACGATGTTCTGAGTGTGGCTGACATG 2421
||| | | | ||| || | | | || | | ||| | |
sj03430 3453 CCAGTTACTTAACTGCTCTGTGCCTCTAGAACATGGGGATAGCTCTCGTC 3502
3651 ----+----*----+----*----+----*----+----*----+----* 3700
msh02335 2422 TACCTTCTGCCTGGCCTGAAGCGGCTGTGTGGCCGCAGCCTGGCCCAGCT 2471
| | ||||| || | || ||| | || || ||
sj03430 3503 GTCACTTCCTAAGGCCTTGTGCAGATGCATGG.GTTACCCAGGTAAAGGA 3551
3701 ----+----*----+----*----+----*----+----*----+----* 3750
msh02335 2472 GCTGGAGGAGGACA......GTGTGGTGGGTGTTTGGCGCATAGCCAAGA 2515
| ||| | ||| ||| || | | |||| |||
sj03430 3552 GGTGGCATGGCACATGGCACGTGGCTTGTAATGTGGTCGCAGAGCTCCCC 3601
3751 ----+----*----+----*----+----*----+----*----+----* 3800
msh02335 2516 TGTTCCGGCTGGCCCGGCTGGAGGACCAGTGTACCGAGTATATGGCCAAA 2565
| || | | ||| | | ||| || | ||||| |
sj03430 3602 TTGTCTCTGTC.TGCAGCTTGCTCCCTGTGCCACCCAGGCTCTGGCCTGA 3650
3801 ----+----*----+----*----+----*----+----*----+----* 3850
msh02335 2566 GTCATAGAGAAGCTG......GTAGAGCGGGAGGATTTCGTGGAGGCCGT 2609
|| || | | | || | ||| | | || | | |
sj03430 3651 ATCTGAGGGCTTCAGTCTTATCCAGCACAGGATGTATCTGTAGGTGGGCT 3700
3851 ----+----*----+----*----+----*----+----*----+----* 3900
msh02335 2610 GCGGGAAGAGGCGGCAGCTGTAGCGGCCCGGCAGGAGACAGACTCCATCC 2659
| | | || || || || || || | ||| |||
sj03430 3701 CTGTGTCCCCACAGCCTCTTGAGAGG.GAGGGAGCTGGTAGATAGTCTCC 3749
3901 ----+----*----+----*----+----*----+----*----+----* 3950
msh02335 2660 CGCTCGTCGATGACATCC............................GCTT 2681
| | | | | || || |
sj03430 3750 CACCCCTGGCAGAGTCCCTGCATAGGTCTTGACTAGCTGCCTCTGTCCCA 3799
3951 ----+----*----+----*----+----*----+----*----+----* 4000
msh02335 2682 CCATGTGGCCAGCACGGTCCAG............................ 2703
|||| | |||| | | |
sj03430 3800 CCATTCTGACAGCCCCCGCAGGTAGGCATGGTTATCTATACCTCATGGAC 3849
4001 ----+----*----+----*----+----*----+----*----+----* 4050
msh02335 2704 ..............ACATACAGTGCCATTGAAGAGGCACAGCAGCGACTG 2739
||| || || ||| | | | | || |
sj03430 3850 TGGGAACTAGAGGCACAGGGAGGTGCAGTGACTTGCCCAGGGCCCCACAG 3899
4051 ----+----*----+----*----+----*----+----*----+----* 4100
msh02335 2740 CGGGCACTCGAGGACC..TGCTCGTGTCCATTGGCTTGGACTGCTAAGCC 2787
| | | | |||| | || | | || | | ||
sj03430 3900 CTAGAAGTGTCAGACCCAGGTCTGTATAACTCGGAGCTCAGACCCTGGCT 3949
4101 ----+----*----+----*----+----*----+----*----+----* 4150
msh02335 2788 CTTCCGTGGCCAGGGCAGCCACGGTGACAGGCATGCGCAGTGTGTGCACG 2837
| | || || | || || || | || || | | ||| |
sj03430 3950 CCTGCGAGGGCCCTGCCTCCCGCCTGCCCTGCCAGCCTGCTCAGGGCATG 3999
4151 ----+----*----+----*----+----*----+----*----+----* 4200
msh02335 2838 CAGCAAGATGGCATTACAATGGGCAGAGGGGACCTCACAGGATGTCCTTG 2887
|| || | || | | | | ||| | |
sj03430 4000 GGAGAACCCCCCAGTCTTCTGCCCCCTAGCGGTCCTGCAGATCCCTGTGG 4049
4201 ----+----*----+----*----+----*----+----*----+----* 4250
msh02335 2888 GGATGAGCCTCCTCCTCCAG.................TGCACAAGGAAGC 2920
| || | | || || | ||| || |||
sj03430 4050 GAATCTGGGCCAGCCCCCCGACCCCCAACCCCATACATGCGCAGGGAGCT 4099
4251 ----+----*----+----*----+----*----+----*----+----* 4300
msh02335 2921 CCCAAGATTTGGGGCAGGCACCACTCAGGGAAAACTGGGGTACGGTAGGC 2970
|| | || || | | | | | | || ||||
sj03430 4100 CCTACTCCCACTGGAAGCCTTCCCGCCAGTGCCCCCCAACCACCACAGGC 4149
4301 ----+----*----+----*----+----*----+----*----+----* 4350
msh02335 2971 TTTGAACTTAGTCCCATCTCCCCCAGCGTCCTACCTGCTCCCTCCTGGTT 3020
| ||| | ||| | | ||| || |||| ||
sj03430 4150 CCTAGCCTTGGCTGTTGTGCCCTGGGAGCCCTTGGTG..ACCTCGGGGGG 4197
4351 ----+----*----+----*----+----*----+----*----+----* 4400
msh02335 3021 CTCACCCAGCCCTGGCTT.GCTTCGGCTATTTCC....GCATACAGGGCT 3065
| | || ||||| ||| || | ||| | || ||| | | |
sj03430 4198 CACCTTCATCCCTGTCTTCACTGCAGCTGTCCCCCGAGGCAGCCTATGAT 4247
4401 ----+----*----+----*----+----*----+----*----+----* 4450
msh02335 3066 GGACAGGACGTAGGGGGTGTGT...GGCAATAAAGCTTGAATTCACTCTG 3112
| | | ||| | | ||| || | || |||| || |
sj03430 4248 GTGCTGAGCGTCGCCGACATGTACCTGCTGCCAGGCCTGAAGAGGCTGT. 4296