Comparison of KIAA cDNA sequences between mouse and human (FLJ00369)
<<Original sequence data>>
mouse mFLJ00369 (msh02173) length: 3160 bp, CDS: 2 - 2821
human (sh06511) length: 5144 bp, CDS: 47 - 2149
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 170 - 172 3 0 0.0
CDS: 173 - 2154 990 182 15.5
3'UTR: 2155 - 5159 1690 292 14.7
amino acid
CDS: 173 - 2154 328 331 50.2
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
msh02173 1 .................................................. 1
sh06511 1 GGGCATCAGGCTGGGCCCAGCACTGTGCCCAGGGCTGGCCAAGTGAGGAG 50
G G
51 ----+----*----+----*----+----*----+----*----+----* 100
msh02173 1 .................................................. 1
sh06511 51 GTGCTGAGGCCAGGAGGAAGGACACTTTATCTTCCTCTTTCTCAAGGGTG 100
A E A R R K D T L S S S F S R V
101 ----+----*----+----*----+----*----+----*----+----* 150
msh02173 1 .................................................. 1
sh06511 101 ATTGGGATGGATGTCACAGAGCCAGGAAGCGGGAGCCGGGACCCAGGGCC 150
I G M D V T E P G S G S R D P G P
151 ----+----*----+----*----+----*----+----*----+----* 200
L G R L A G H L R A
msh02173 1 ...................CTCGGGCGCCTCGCCGGTCACCTCCCCGCGC 31
|||||||||| |||||||||||| ||||||
sh06511 151 CGGGATCGCCGAGCCCGACCTCGGGCGCCCCGCCGGTCACCT..CCGCGC 198
G I A E P D L G R P A G H L R A
201 ----+----*----+----*----+----*----+----*----+----* 250
D T S P A E S E M G E V A G G A
msh02173 32 GGACACCAGCCCGGCGGAGTCC.TGGAGATGGGAGAAGTCGCCGGAGGGG 80
|||||||||||| || ||| || |||||||| ||| ||||| ||||||
sh06511 199 GGACACCAGCCCTGCAGAGCCCAGGGAGATGGAAGACTTCGCCCGAGGGG 248
D T S P A E P R E M E D F A R G A
251 ----+----*----+----*----+----*----+----*----+----* 300
- P G P P R S G L V - I I I
msh02173 81 CGG...CCCCAGGGCCTCCCCGGTCTGGCCTGGTGTC...CATCATCATC 124
||| ||||||| || ||||| |||||||||| | || |||||||
sh06511 249 CGGCCTCCCCAGGCCCCTCCCGGCCTGGCCTGGTTCCCGTCAGCATCATC 298
A S P G P S R P G L V P V S I I
301 ----+----*----+----*----+----*----+----*----+----* 350
G A E D E D F E N E L E A N S E D
msh02173 125 GGGGCGGAGGATGAGGATTTTGAGAACGAGCTGGAGGCGAACTCAGAAGA 174
||||| |||||||||||||||||||||||||||||| | |||||||||||
sh06511 299 GGGGCTGAGGATGAGGATTTTGAGAACGAGCTGGAGACAAACTCAGAAGA 348
G A E D E D F E N E L E T N S E E
351 ----+----*----+----*----+----*----+----*----+----* 400
Q N S Q F Q S L E Q V K R R P A H
msh02173 175 TCAAAACAGCCAGTTCCAGAGCCTAGAGCAAGTGAAGCGCCGCCCTGCCC 224
||||||||||||||||||||||| ||||| |||||||| ||||| ||||
sh06511 349 GCAAAACAGCCAGTTCCAGAGCCTGGAGCAGGTGAAGCGGCGCCCAGCCC 398
Q N S Q F Q S L E Q V K R R P A H
401 ----+----*----+----*----+----*----+----*----+----* 450
L M A L L Q H V A L Q F E P G P
msh02173 225 ACCTCATGGCCCTCCTGCAGCATGTGGCCCTGCAGTTCGAGCCAGGACCA 274
|||||||||||||||||||||| |||||||||||||| |||||||||||
sh06511 399 ACCTCATGGCCCTCCTGCAGCACGTGGCCCTGCAGTTTGAGCCAGGACCC 448
L M A L L Q H V A L Q F E P G P
451 ----+----*----+----*----+----*----+----*----+----* 500
L L C C L H A D M L S S L G P K E
msh02173 275 CTGCTCTGCTGCCTGCATGCAGACATGCTGAGCTCTCTGGGCCCCAAAGA 324
||||| ||||| |||||||| ||||||||| |||| ||||||||||| ||
sh06511 449 CTGCTTTGCTGTCTGCATGCCGACATGCTGGGCTCACTGGGCCCCAAGGA 498
L L C C L H A D M L G S L G P K E
501 ----+----*----+----*----+----*----+----*----+----* 550
A K K A F L D F Y H S F L E K T A
msh02173 325 AGCCAAGAAGGCCTTCCTTGACTTCTATCACAGTTTCCTGGAGAAGACTG 374
||||||||||||||||| |||||||| ||||| |||||||||||||| |
sh06511 499 GGCCAAGAAGGCCTTCCTGGACTTCTACCACAGCTTCCTGGAGAAGACAG 548
A K K A F L D F Y H S F L E K T A
551 ----+----*----+----*----+----*----+----*----+----* 600
V L R V P V P P S V A F E L D R
msh02173 375 CGGTTCTACGGGTGCCGGTCCCTCCCAGTGTCGCTTTTGAACTTGATCGT 424
||||||| ||||||||||||||||||| ||||| ||||||||||| ||
sh06511 549 CGGTTCTCCGGGTGCCGGTCCCTCCCAACGTCGCCTTTGAACTTGACCGC 598
V L R V P V P P N V A F E L D R
601 ----+----*----+----*----+----*----+----*----+----* 650
T R P D L I S E D V Q R R F I Q E
msh02173 425 ACTCGACCTGATCTGATCTCTGAGGATGTCCAGAGGCGGTTCATACAAGA 474
||| | |||| || ||||| |||||||||||| |||||||| | || ||
sh06511 599 ACTAGGGCTGACCTCATCTCCGAGGATGTCCAGCGGCGGTTCGTGCAGGA 648
T R A D L I S E D V Q R R F V Q E
651 ----+----*----+----*----+----*----+----*----+----* 700
V V Q S Q Q A A V S R Q L E D F R
msh02173 475 GGTGGTGCAGAGCCAGCAGGCAGCCGTGAGCCGTCAGCTAGAGGACTTCC 524
||||||||| |||||||||| ||||||| |||| ||||| ||||||||||
sh06511 649 GGTGGTGCAAAGCCAGCAGGTAGCCGTGGGCCGGCAGCTGGAGGACTTCC 698
V V Q S Q Q V A V G R Q L E D F R
701 ----+----*----+----*----+----*----+----*----+----* 750
S K R L M G M T P W E Q E L S L
msh02173 525 GCTCCAAGCGGCTCATGGGCATGACGCCCTGGGAGCAGGAACTGAGCCTG 574
| |||||||||||||||||||||||||||||||||||||| ||| || |
sh06511 699 GTTCCAAGCGGCTCATGGGCATGACGCCCTGGGAGCAGGAGCTGGCCCAG 748
S K R L M G M T P W E Q E L A Q
751 ----+----*----+----*----+----*----+----*----+----* 800
L E P W I G K D R G N Y E A R E R
msh02173 575 CTGGAGCCCTGGATTGGGAAAGACCGAGGCAACTATGAGGCCCGGGAGCG 624
|||||| | ||| ||||| ||||||| || ||| ||||||||||||||
sh06511 749 CTGGAGGCTTGGGTTGGGCGGGACCGAGCCAGCTACGAGGCCCGGGAGCG 798
L E A W V G R D R A S Y E A R E R
801 ----+----*----+----*----+----*----+----*----+----* 850
H V A E R L L S H L E E T Q H T I
msh02173 625 GCATGTTGCGGAGCGGCTGCTGTCCCACCTGGAGGAGACCCAGCATACCA 674
||| || |||||||||||||| ||||||||||||| || |||||||
sh06511 799 GCACGTGGCGGAGCGGCTGCTCATGCACCTGGAGGAGATGCAACATACCA 848
H V A E R L L M H L E E M Q H T I
851 ----+----*----+----*----+----*----+----*----+----* 900
S T D E E K S A A V V T A I S L
msh02173 675 TCTCTACAGATGAAGAGAAAAGTGCTGCTGTGGTCACTGCCATCAGCCTG 724
||||||| || ||||| || |||||||| ||||||| ||||| |||||
sh06511 849 TCTCTACCGACGAAGAAAAGAGTGCTGCCGTGGTCAACGCCATTGGCCTG 898
S T D E E K S A A V V N A I G L
901 ----+----*----+----*----+----*----+----*----+----* 950
Y M R H L G V R T K S G D K K S G
msh02173 725 TATATGCGCCACCTTGGAGTCCGGACCAAGAGTGGGGACAAGAAGTCGGG 774
|| |||||||||||||| || |||||||||||||| ||||||||||||||
sh06511 899 TACATGCGCCACCTTGGGGTGCGGACCAAGAGTGGAGACAAGAAGTCGGG 948
Y M R H L G V R T K S G D K K S G
951 ----+----*----+----*----+----*----+----*----+----* 1000
R N F F R K K V M G N R R S D E P
msh02173 775 AAGGAACTTCTTCCGGAAAAAGGTGATGGGGAATCGGAGGTCAGACGAAC 824
|||||||||||||||||||||||||||||||| ||| |||| ||||| |
sh06511 949 GAGGAACTTCTTCCGGAAAAAGGTGATGGGGAACCGGCGGTCGGACGAGC 998
R N F F R K K V M G N R R S D E P
1001 ----+----*----+----*----+----*----+----*----+----* 1050
P K T K K G L S S I L D P A R W
msh02173 825 CCCCAAAGACAAAGAAAGGGCTGAGCAGTATCCTAGATCCTGCACGTTGG 874
| | ||||| ||||| ||||||||||| ||||| ||| | || || |||
sh06511 999 CTGCCAAGACCAAGAAGGGGCTGAGCAGCATCCTGGATGCCGCCCGCTGG 1048
A K T K K G L S S I L D A A R W
1051 ----+----*----+----*----+----*----+----*----+----* 1100
N R G E P S A P D C R H L K V E A
msh02173 875 AACCGGGGAGAGCCATCCGCTCCAGATTGTCGACATCTAAAGGTCGAGGC 924
|||||||||||||| | |||||||| |||||| || || | ||||
sh06511 1049 AACCGGGGAGAGCCCCAGGTTCCAGATTTTCGACACCTCAAAGCAGAGGT 1098
N R G E P Q V P D F R H L K A E V
1101 ----+----*----+----*----+----*----+----*----+----* 1150
D A E K P G P A D R K G G L G M S
msh02173 925 TGATGCAGAGAAGCCAGGCCCTGCAGACCGGAAGGGAGGCCTGGGTATGT 974
|||||| ||||||||||| || ||||||||||||||||| |||| |||
sh06511 1099 TGATGCCGAGAAGCCAGGTGCTACAGACCGGAAGGGAGGCGTGGGGATGC 1148
D A E K P G A T D R K G G V G M P
1151 ----+----*----+----*----+----*----+----*----+----* 1200
S R D R T V G T P G Q D N P G V
msh02173 975 CTTCTCGGGACAGGACTGTTGGGACTCCTGGACAGGACAACCCAGGAGTC 1024
| ||||||||| ||| | | ||| ||||||| ||||||| ||| ||||||
sh06511 1149 CCTCTCGGGACCGGAATATCGGGGCTCCTGGGCAGGACACCCCTGGAGTC 1198
S R D R N I G A P G Q D T P G V
1201 ----+----*----+----*----+----*----+----*----+----* 1250
S L H P L S T D S V D R E P G V
msh02173 1025 TCCCTGCACCCTCTGTCTACAGACAGCGTCGACTCCCGGGAACCAGGCGT 1074
|| |||||||||||||| |||||| || |||||||||||| |
sh06511 1199 TCTCTGCACCCTCTGTCCCTGGACAGCCCAGA...CCGGGAACCAGGTGC 1245
S L H P L S L D S P D R E P G A
1251 ----+----*----+----*----+----*----+----*----+----* 1300
D T L Q E P G D T P P Q G P T S L
msh02173 1075 GGATACCCTGCAGGAGCCAGGGGATACACCCCCACAGGGCCCTACCAGCC 1124
|| ||| | ||||| ||||| || |||| |||||||| | ||||
sh06511 1246 TGACGCCCCCCTGGAGCTGGGGGACTCATCCCCGCAGGGCCCAATGAGCC 1295
D A P L E L G D S S P Q G P M S L
1301 ----+----*----+----*----+----*----+----*----+----* 1350
E P L A P P E S T E D N G E T E
msh02173 1125 TGGAGCCCCTGGCGCCCCCAGAGAGCACAGAGGACAATGGCGAGACTGAG 1174
||||| || |||||||||||||||| || || || | ||| || |||
sh06511 1296 TGGAGTCCTTGGCGCCCCCAGAGAGTACCGACGAGGGGGCCGAAACCGAG 1345
E S L A P P E S T D E G A E T E
1351 ----+----*----+----*----+----*----+----*----+----* 1400
msh02173 1175 .................................................. 1175
sh06511 1346 AGGTGCCCAGGCTGGGGTGCAGGGGCGGGAGGTGTGGCTTACTGGGCGCT 1395
R C P G W G A G A G G V A Y W A L
1401 ----+----*----+----*----+----*----+----*----+----* 1450
msh02173 1175 .................................................. 1175
sh06511 1396 GGTGGGTGGGTGCAGGGTCACCGCTGCCATCTGTGCCTGCCTGTCCCAGG 1445
V G G C R V T A A I C A C L S Q A
1451 ----+----*----+----*----+----*----+----*----+----* 1500
msh02173 1175 .................................................. 1175
sh06511 1446 CTCTTGCTCCCCATGCTCCTCTGCTGCTCTCTGGGTCTGGCCATTCCTCT 1495
L A P H A P L L L S G S G H S S
1501 ----+----*----+----*----+----*----+----*----+----* 1550
msh02173 1175 .................................................. 1175
sh06511 1496 CCCTTCTTCTTTCCTTTTCTCATCTCCCTCCTGCTTCCTCATTGCCCCCC 1545
P F F F P F L I S L L L P H C P P
1551 ----+----*----+----*----+----*----+----*----+----* 1600
msh02173 1175 .................................................. 1175
sh06511 1546 TTTCCTTTTATCCTTCCTTTTTCCTCTGCTCCTTCCTCTCCTTCCTTTTT 1595
F L L S F L F P L L L P L L P F F
1601 ----+----*----+----*----+----*----+----*----+----* 1650
msh02173 1175 .................................................. 1175
sh06511 1596 TCACTAATCCTTCTCCTCCTCCCTTCCTCTCCACCACTCCTTCCATCTTC 1645
T N P S P P P F L S T T P S I F
1651 ----+----*----+----*----+----*----+----*----+----* 1700
msh02173 1175 .................................................. 1175
sh06511 1646 CTTTATTTCCCCCCCTCCCTCTCTCACCTTCCCCCTCCTCTCTTTCCTCC 1695
L Y F P P S L S H L P P P L F P P
1701 ----+----*----+----*----+----*----+----*----+----* 1750
msh02173 1175 .................................................. 1175
sh06511 1696 CCACTCCTCTCTCACCTGGGTTTTCTTTCCCCACCTTCCATCCCCCTCCG 1745
H S S L T W V F F P H L P S P S D
1751 ----+----*----+----*----+----*----+----*----+----* 1800
msh02173 1175 .................................................. 1175
sh06511 1746 ATCTCCCTGCCACTTTTCATTTTTTCAGCCCTTCCTCCCCCTTCTCTTTC 1795
L P A T F H F F S P S S P F S F
1801 ----+----*----+----*----+----*----+----*----+----* 1850
msh02173 1175 .................................................. 1175
sh06511 1796 AAGCCCCCCTGCCCCCTGCCCCCCACCCCCCGCCTCGCTCCTGCCTCCTG 1845
K P P C P L P P T P R L A P A S W
1851 ----+----*----+----*----+----*----+----*----+----* 1900
msh02173 1175 .................................................. 1175
sh06511 1846 GTGCCCGTCCCTCAACCCCCCACCCCTCTGCTCTGTGCCCTGGGGGCCCT 1895
C P S L N P P P L C S V P W G P C
1901 ----+----*----+----*----+----*----+----*----+----* 1950
msh02173 1175 .................................................. 1175
sh06511 1896 GTCCCCCTTACAGCTGGGGGGCAGGCTCTGCCTCCTGCCCGTCCTTGTGC 1945
P P Y S W G A G S A S C P S L C
1951 ----+----*----+----*----+----*----+----*----+----* 2000
msh02173 1175 .................................................. 1175
sh06511 1946 CGCTGCTTTGGGGACCCTTTGGTGGGTGCGGGGAGGTGGGTCAGGTTCCA 1995
R C F G D P L V G A G R W V R F H
2001 ----+----*----+----*----+----*----+----*----+----* 2050
msh02173 1175 .................................................. 1175
sh06511 1996 TCTGGGCCCACCTCTGACCCTGTGCCCCTCTCTCCCCAGAAGGTGGAAGA 2045
L G P P L T L C P S L P R R W K R
2051 ----+----*----+----*----+----*----+----*----+----* 2100
msh02173 1175 .................................................. 1175
sh06511 2046 GGTGGGTGCCTGGGCCCTGGGTGGGGGAAGGGCTAGCCCCTCCCCCATTT 2095
W V P G P W V G E G L A P P P F
2101 ----+----*----+----*----+----*----+----*----+----* 2150
msh02173 1175 .................................................. 1175
sh06511 2096 CTCCCAGCCCCTCCCCTCTCCCCATGGCCACTCCCTCCCCTTCACTCCCT 2145
L P A P P L S P W P L P P L H S L
2151 ----+----*----+----*----+----*----+----*----+----* 2200
msh02173 1175 .................................................. 1175
sh06511 2146 GTGAGGGGTGGGTGGGGACATCACCCTCCCAGTTGAAGAGCTAAGTATGG 2195
*
2201 ----+----*----+----*----+----*----+----*----+----* 2250
msh02173 1175 .................................................. 1175
sh06511 2196 AAATCCTCCCCACCCCATAACACCCCCTCTGTTGCCATCCCCCTGCCTCA 2245
2251 ----+----*----+----*----+----*----+----*----+----* 2300
msh02173 1175 .................................................. 1175
sh06511 2246 GGGAAGGGAGGGGGTCAGTCCTATGCTCCATCCTGGGTTCCCCATCCCTT 2295
2301 ----+----*----+----*----+----*----+----*----+----* 2350
msh02173 1175 .................................................. 1175
sh06511 2296 CCCCCATCAAATTTCAGTATCCCCCCTCCCCCAAGACCCCCCACTACCCC 2345
2351 ----+----*----+----*----+----*----+----*----+----* 2400
msh02173 1175 .................................................. 1175
sh06511 2346 AGTGCCCCTAAAATCCCACCACTCCTCTGACTCTCTCCTCTCTTCTGTTG 2395
2401 ----+----*----+----*----+----*----+----*----+----* 2450
msh02173 1175 .................................................. 1175
sh06511 2396 CATGTTTGATCCCTGTCCTGGTCACCCTTGCCCCGGTCCTGGTCTCTCCC 2445
2451 ----+----*----+----*----+----*----+----*----+----* 2500
msh02173 1175 .................................................. 1175
sh06511 2446 TGTCTCTGTCCCTGTCCTGGTCTCTCCCCGTCTCTGTCCCTGTCCTCGTC 2495
2501 ----+----*----+----*----+----*----+----*----+----* 2550
msh02173 1175 .................................................. 1175
sh06511 2496 TCTCCCCAATTTCTGTCCCTGGCCCTGGCCTCTCCCCACCTCTGTCCCTG 2545
2551 ----+----*----+----*----+----*----+----*----+----* 2600
msh02173 1175 .................................................. 1175
sh06511 2546 CCCTGGTCTCTCCCCGTCTCTGTCCCTGTCCTGGTTTCTCTTCGTCTCTG 2595
2601 ----+----*----+----*----+----*----+----*----+----* 2650
msh02173 1175 .................................................. 1175
sh06511 2596 TTCTTGTCTTGGTCTCTCCTTGTCTCTGTCCCCGGCATCTGCCTGACTCT 2645
2651 ----+----*----+----*----+----*----+----*----+----* 2700
msh02173 1175 .................................................. 1175
sh06511 2646 GTCCTTGGCCTCGGGGTCCAGGCTATCAGGGCGTCTGGGGCGCTCAGAGA 2695
2701 ----+----*----+----*----+----*----+----*----+----* 2750
msh02173 1175 .................................................. 1175
sh06511 2696 GCCTGCGGGTGAGTGACCGCCGCCGGCCTTCCCGGGGCAGCCTCGGGGCT 2745
2751 ----+----*----+----*----+----*----+----*----+----* 2800
msh02173 1175 .................................................. 1175
sh06511 2746 AAGGGCCGGGGTGGGGGCCGCTCCCGGAGCGACGTGGACATGGACCCCAG 2795
2801 ----+----*----+----*----+----*----+----*----+----* 2850
msh02173 1175 .................................................. 1175
sh06511 2796 TTCCGCCACGGCAGTGCTTGGCCCTGCCCGACGAGCCACGTATGTCAACC 2845
2851 ----+----*----+----*----+----*----+----*----+----* 2900
msh02173 1175 .................................................. 1175
sh06511 2846 CTCTCCCTTCCCCCATCCACTAAGGCAGCCTGGAGAATCAGGGAGGGATT 2895
2901 ----+----*----+----*----+----*----+----*----+----* 2950
msh02173 1175 .................................................. 1175
sh06511 2896 GTTGTCAGAGTCACAGAGGAATGGGCGTTGGAGACCGAGGTCATTGAGGC 2945
2951 ----+----*----+----*----+----*----+----*----+----* 3000
msh02173 1175 .................................................. 1175
sh06511 2946 CAACTGTGGTCACAGACCTTGGAGGAGGAGGGGGTAGAATGCTTCTAGAG 2995
3001 ----+----*----+----*----+----*----+----*----+----* 3050
msh02173 1175 .................................................. 1175
sh06511 2996 ATCTGGGAACTCTAGTGTGGTCCGATCTAGAGACCTGGTCTGCTGCACGG 3045
3051 ----+----*----+----*----+----*----+----*----+----* 3100
msh02173 1175 .................................................. 1175
sh06511 3046 GCCACCCTGCGGGCATCGAATGCCAAGGCCACTGACCGGGGTTGAACGCT 3095
3101 ----+----*----+----*----+----*----+----*----+----* 3150
msh02173 1175 .................................................. 1175
sh06511 3096 CTAAGAGGCTGAAGGCTGCTTCTTGGGATGGCCCAAGCTGGGGCCCTAAC 3145
3151 ----+----*----+----*----+----*----+----*----+----* 3200
msh02173 1175 ...............AGCCCTGAGCCCGGAGATGATGGGGAGCCAGGACG 1209
||||| ||||| |||||||| |||||||| || ||
sh06511 3146 AAGGCCTCTGTCCACAGCCCCGAGCCTGGAGATGAGGGGGAGCCGGGGCG 3195
3201 ----+----*----+----*----+----*----+----*----+----* 3250
msh02173 1210 GTCAGGCCTGGAACTGGAACCAGAAGAACCTCCTGGGTGGAGGGAACTCG 1259
||| || ||||| || ||||||||||| ||||| || ||| |||||||||
sh06511 3196 GTCGGGACTGGAGCTTGAACCAGAAGAGCCTCCCGGCTGGCGGGAACTCG 3245
3251 ----+----*----+----*----+----*----+----*----+----* 3300
msh02173 1260 TGCCCCCAGACACCCTGCTCAGTCTGCCCAAGAGCCAAGTGAAGCGGCAA 1309
| |||||||||||||||| ||| |||||||||||||| |||||||||||
sh06511 3246 TCCCCCCAGACACCCTGCACAGCCTGCCCAAGAGCCAGGTGAAGCGGCAG 3295
3301 ----+----*----+----*----+----*----+----*----+----* 3350
msh02173 1310 GAGGTCATCAGCGAGCTGCTCGTGACTGAGGCAGCTCACGTGCGCATGCT 1359
|||||||||||||||||||| ||||| ||||| || ||||||||||||||
sh06511 3296 GAGGTCATCAGCGAGCTGCTGGTGACAGAGGCGGCCCACGTGCGCATGCT 3345
3351 ----+----*----+----*----+----*----+----*----+----* 3400
msh02173 1360 ACGGGTACTGCATGACCTCTTCTACCAGCCCATGGCGGATGGAGGCTTCT 1409
||||| ||||| |||||||||| |||||||||||| || | ||||
sh06511 3346 GCGGGTGCTGCACGACCTCTTCTTCCAGCCCATGGCAGAATGCCTGTTCT 3395
3401 ----+----*----+----*----+----*----+----*----+----* 3450
msh02173 1410 TCCCTCTGGACGAGCTGCAGAACATCTTCCCGAGCCTGGATGAGCTCATC 1459
|||| |||| |||||||||||||||||||| |||||||| |||||||||
sh06511 3396 TCCCCTTGGAGGAGCTGCAGAACATCTTCCCCAGCCTGGAGGAGCTCATC 3445
3451 ----+----*----+----*----+----*----+----*----+----* 3500
msh02173 1460 GAGGTGCACTCCCTGTTCCTCGATCGCTTGATGAAGCGGAGACAAGAGAG 1509
|||||||| |||||||||||||||||| ||||||||||||| || |||||
sh06511 3446 GAGGTGCATTCCCTGTTCCTCGATCGCCTGATGAAGCGGAGGCAGGAGAG 3495
3501 ----+----*----+----*----+----*----+----*----+----* 3550
msh02173 1510 TGGCTACCTCATTGAGGAGATCGGCGATGTGCTACTGGCCCGGTTCGATG 1559
|||||||||||| ||||||||||| || ||||| ||||||||||| ||||
sh06511 3496 TGGCTACCTCATCGAGGAGATCGGAGACGTGCTGCTGGCCCGGTTTGATG 3545
3551 ----+----*----+----*----+----*----+----*----+----* 3600
msh02173 1560 GTGCTGAGGGCTCATGGTTCCAGAAGATCTCCTCCCGCTTCTGCAGCCGC 1609
||||||||||||| ||||||||||| ||||||||||||||||||||||||
sh06511 3546 GTGCTGAGGGCTCCTGGTTCCAGAAAATCTCCTCCCGCTTCTGCAGCCGC 3595
3601 ----+----*----+----*----+----*----+----*----+----* 3650
msh02173 1610 CAGTCGTTCGCTCTAGAGCAGCTCAAAGCCAAGCAGCGCAAGGAGCCTCG 1659
||||| || || |||||||||||||||||||||| |||||||| |||||
sh06511 3596 CAGTCATTTGCCTTAGAGCAGCTCAAAGCCAAGCAACGCAAGGACCCTCG 3645
3651 ----+----*----+----*----+----*----+----*----+----* 3700
msh02173 1660 GTTCTGTGCCTTTGTGCAGGAAGCTGAGAGCCGCCCGAGATGCCGGCGCC 1709
|||||||||||| |||||||||||||||||||||||| | ||||| ||||
sh06511 3646 GTTCTGTGCCTTCGTGCAGGAAGCTGAGAGCCGCCCGCGGTGCCGCCGCC 3695
3701 ----+----*----+----*----+----*----+----*----+----* 3750
msh02173 1710 TACAGTTAAAGGACATGATCCCCACTGAGATGCAGCGACTGACCAAGTAC 1759
| ||| | ||||||||||||||||| ||||||||||| ||||||||||||
sh06511 3696 TGCAGCTGAAGGACATGATCCCCACGGAGATGCAGCGGCTGACCAAGTAC 3745
3751 ----+----*----+----*----+----*----+----*----+----* 3800
msh02173 1760 CCACTGCTGCTACAGAGCATCGGGCAGAACACAGAGGAGTCTACAGAACG 1809
|| ||||| || ||||||||||||||||||||||| ||| | ||||||||
sh06511 3746 CCCCTGCTCCTGCAGAGCATCGGGCAGAACACAGAAGAGCCCACAGAACG 3795
3801 ----+----*----+----*----+----*----+----*----+----* 3850
msh02173 1810 AGGGAAAGTGGAGCTTGCAGCTGAGTGCTGCCGGGAGATTCTGCACCATG 1859
| |||||||||||| ||||| |||||||||||||| ||||| ||||| |
sh06511 3796 GGAGAAAGTGGAGCTGGCAGCCGAGTGCTGCCGGGAAATTCTACACCACG 3845
3851 ----+----*----+----*----+----*----+----*----+----* 3900
msh02173 1860 TCAATCAAGCCGTCCGTGACATGGAGGACCTGCTGCGGCTCAAGGATTAC 1909
|||| |||||||| ||||||||||||||||||||| |||||||||| ||
sh06511 3846 TCAACCAAGCCGTGCGTGACATGGAGGACCTGCTGAGGCTCAAGGACTAT 3895
3901 ----+----*----+----*----+----*----+----*----+----* 3950
msh02173 1910 CAGCGGCGCCTGGACTTGACTCACCTACGGCAGAGCAGTGACCCTATGCT 1959
|||||||||||||||||| | ||||| ||||||||||| |||||||||||
sh06511 3896 CAGCGGCGCCTGGACTTGTCCCACCTTCGGCAGAGCAGCGACCCTATGCT 3945
3951 ----+----*----+----*----+----*----+----*----+----* 4000
msh02173 1960 GAGCGAGTTCAAGAACCTGGACATCACTAAGAAGAAGTTGGTCCATGAAG 2009
||||||||||||||||||||||||||| |||||||| |||||||| || |
sh06511 3946 GAGCGAGTTCAAGAACCTGGACATCACCAAGAAGAAATTGGTCCACGAGG 3995
4001 ----+----*----+----*----+----*----+----*----+----* 4050
msh02173 2010 GCCCCCTCACGTGGCGAGTGACCAAAGACAAAGCTATAGAAGTGCACGTG 2059
|||| || |||||||| ||||| || ||||| || | || ||||| |||
sh06511 3996 GCCCACTGACGTGGCGGGTGACTAAGGACAAGGCAGTGGAGGTGCATGTG 4045
4051 ----+----*----+----*----+----*----+----*----+----* 4100
msh02173 2060 CTCTTGCTGGACGACCTGCTGCTGCTGCTCCAGCGCCAGGACGAGAGGCT 2109
|| ||||||||||||||||||||||||||||||||||||||||| ||||
sh06511 4046 CTGCTGCTGGACGACCTGCTGCTGCTGCTCCAGCGCCAGGACGAGCGGCT 4095
4101 ----+----*----+----*----+----*----+----*----+----* 4150
msh02173 2110 GCTGCTCAAGTCCCACAGCCGGACGCTGACACCTACCCCCGATGGCAAGA 2159
||||||||||||||| |||||||| ||||| || || |||||||||||||
sh06511 4096 GCTGCTCAAGTCCCATAGCCGGACACTGACGCCCACGCCCGATGGCAAGA 4145
4151 ----+----*----+----*----+----*----+----*----+----* 4200
msh02173 2160 CCATGCTGCGGCCGGTGCTCCGGCTCACCTCTGCCATGACCCGAGAGGTG 2209
||||||||||||| ||||| ||||||||||| ||||||||||| ||||||
sh06511 4146 CCATGCTGCGGCCCGTGCTGCGGCTCACCTCCGCCATGACCCGCGAGGTG 4195
4201 ----+----*----+----*----+----*----+----*----+----* 4250
msh02173 2210 GCCACTGATCACAAAGCTTTCTACGTCATTTTTACCTGGGACCAGGAGGC 2259
||||| ||||||||||| ||||||||| ||||||||||||||||||||||
sh06511 4196 GCCACCGATCACAAAGCCTTCTACGTCCTTTTTACCTGGGACCAGGAGGC 4245
4251 ----+----*----+----*----+----*----+----*----+----* 4300
msh02173 2260 CCAGATATATGAGCTGGTGGCACAGACATCTTCGGAACGCAAAAACTGGT 2309
||||||||| ||||||||||||||||| ||||| || ||||||||||
sh06511 4246 CCAGATATACGAGCTGGTGGCACAGACTGTGTCGGAGCGGAAAAACTGGT 4295
4301 ----+----*----+----*----+----*----+----*----+----* 4350
msh02173 2310 GTAACCTCATCACTGAGACTGCTGGATCCCTGAAGGTCCCTGCCCCTGCC 2359
|| ||||||||||||||||| ||||||||||| |||||||||||||||
sh06511 4296 GTGCTCTCATCACTGAGACTGCCGGATCCCTGAAAGTCCCTGCCCCTGCC 4345
4351 ----+----*----+----*----+----*----+----*----+----* 4400
msh02173 2360 TCCCGCCTCAAACCCCGGCCCAGCCCAAGCAGCATCCGAGAACCCCTGCT 2409
|| |||| || |||||||||||||| ||||||| |||||||||||| ||
sh06511 4346 TCTCGCCCTAAGCCCCGGCCCAGCCCGAGCAGCACCCGAGAACCCCTCCT 4395
4401 ----+----*----+----*----+----*----+----*----+----* 4450
msh02173 2410 CAGCAGCTCTGAGAATGGCACTGGAGGCGCAGAGATGGCTCCAGCTGATG 2459
||||||||||||||| |||| ||| ||| ||||| | ||||||||||||
sh06511 4396 CAGCAGCTCTGAGAACGGCAATGGTGGCCGAGAGACGTCTCCAGCTGATG 4445
4451 ----+----*----+----*----+----*----+----*----+----* 4500
msh02173 2460 CCAGGACAGAGCGGCTCCTCAATGACCTCCTGCCCTTCTGCAGACCAGGC 2509
|| |||| ||| | |||||| ||||||||||||||||||||||||||||
sh06511 4446 CCCGGACCGAGAGAATCCTCAGTGACCTCCTGCCCTTCTGCAGACCAGGC 4495
4501 ----+----*----+----*----+----*----+----*----+----* 4550
msh02173 2510 CCAGAGGGCCAGCTTGCTGCCACAGCCCTTCAGAAAGTACTGTCCCTGAA 2559
|| ||||||||||| |||||||| ||||||| |||||| |||||||||||
sh06511 4496 CCCGAGGGCCAGCTCGCTGCCACGGCCCTTCGGAAAGTGCTGTCCCTGAA 4545
4551 ----+----*----+----*----+----*----+----*----+----* 4600
msh02173 2560 GCAGATCCTGCTAAGCACTGAGGAAGACAGTGGAGCGGGGCCTCCCCGCG 2609
|||| | ||| | | |||||||||| ||| ||||||||||| || |
sh06511 4546 GCAGCTTCTGTTTCCGGCGGAGGAAGACAATGGGGCGGGGCCTCCTCGAG 4595
4601 ----+----*----+----*----+----*----+----*----+----* 4650
msh02173 2610 ATGGGGATGGGGTGCCTGGTGGTAGGGCCCCCGGCCCAGTGCACACCCAG 2659
||||||||||||| || || || | ||| |||||| | ||||||
sh06511 4596 ATGGGGATGGGGTCCCAGGGGGCGGCCCCCTGAGCCCAGCACGGACCCAG 4645
4651 ----+----*----+----*----+----*----+----*----+----* 4700
msh02173 2660 GAGATTGAGGAAAACTTGCTTAGCTTAGAGGTGGCCATCAGACAACTGGA 2709
|| || |||| ||| |||| ||||| |||| | |||| | || |||||
sh06511 4646 GAAATCCAGGAGAACCTGCTCAGCTTGGAGGAGACCATGAAGCAGCTGGA 4695
4701 ----+----*----+----*----+----*----+----*----+----* 4750
msh02173 2710 GGAGTTGGAAGAGGAATTTTGTCGCCTAAGACCCCTCCTGTCCCAGCTTG 2759
||||||||| ||||||||||| ||||| |||||||||||||| |||||||
sh06511 4696 GGAGTTGGAGGAGGAATTTTGCCGCCTGAGACCCCTCCTGTCTCAGCTTG 4745
4751 ----+----*----+----*----+----*----+----*----+----* 4800
msh02173 2760 GGGGG.ACTCTGTCCCCCAACCTGGCTGCACCTGAACGCTCTGCTCAGAC 2808
||||| ||||||||||||| ||||||||||| ||| | || |||
sh06511 4746 GGGGGAACTCTGTCCCCCAGCCTGGCTGCACTTGAGGTTCCCGCCCAGGA 4795
4801 ----+----*----+----*----+----*----+----*----+----* 4850
msh02173 2809 AGGCCTTT...CATGAAGAGAAGAGTGGGGGAGAGGATGCAGGGGGGCCC 2855
|||||||| | | |||| || |||||||||||| | | ||| ||
sh06511 4796 AGGCCTTTTGCAAGAAGGAGAGGAATGGGGGAGAGGA..CGTGAGGGACC 4843
4851 ----+----*----+----*----+----*----+----*----+----* 4900
msh02173 2856 ACCCCCACCCCCACAGCTGCCACAGCATCTCACACCCCAGAGGCCTGGAG 2905
|||||||||| |||||||||| |||||||||||||||| |||| | |||
sh06511 4844 ACCCCCACCCACACAGCTGCCGCAGCATCTCACACCCC.GAGGGCCTGAG 4892
4901 ----+----*----+----*----+----*----+----*----+----* 4950
msh02173 2906 CAGAGGGAG..ATTGGCTGAACTTGATAGCAGACCTGCTCGGGTCCCTGC 2953
|||||||| | ||| | || || | || ||| |||| |||
sh06511 4893 GAGAGGGAGCTGTGGGCCACGCCTGGGAGGGGCCCAGCTGGGGTTACTGG 4942
4951 ----+----*----+----*----+----*----+----*----+----* 5000
msh02173 2954 CTCCCACTCTGGCCTCTGCCTTTCTCCCTCCTGCCTTCTGCTTGGGGAAC 3003
| || | | | | | ||||||||||||| ||||||||||| ||
sh06511 4943 CCCCGCATGAGCCTCGGCCATCTCTCCCTCCTGCCCTCTGCTTGGGGGAC 4992
5001 ----+----*----+----*----+----*----+----*----+----* 5050
msh02173 3004 TCAGGGCTTCACTC.CCAGAGCACCCCCTTAATCCCCACTTTTCAGGCCG 3052
|||||||| || || || ||||| | | | | | ||||
sh06511 4993 TCAGGGCTCCATTCTGGAGGGCACCACGGTGACC.........CGGGCCA 5033
5051 ----+----*----+----*----+----*----+----*----+----* 5100
msh02173 3053 TCTCAGTATTGCCTATGGGGGGTCACCCTCCTTCCCCTACCCCAAGTGCC 3102
|||||||||||||| |||||| |||||| |||| |||||||||||
sh06511 5034 TCTCAGTATTGCCTGTGGGGGCCACCCCTCCACCCCCACCCCCAAGTGCC 5083
5101 ----+----*----+----*----+----*----+----*----+----* 5150
msh02173 3103 TTTGCTATGTTTTTATATCCTGGACTGGAGGTTTA.TTTTTAATATATAT 3151
|| ||| |||||||||| |||| | |||||||||| ||||||||||||||
sh06511 5084 TTCGCTCTGTTTTTATACCCTGAATTGGAGGTTTATTTTTTAATATATAT 5133
5151 ----+----*- 5161
msh02173 3152 TATCTAAGG.. 3160
||||||||
sh06511 5134 TATCTAAGAAG 5144