FASTA searches a protein or DNA sequence data bank
 version 3.4t11 Apr 17, 2002
Please cite:
 W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

 ../query/mFLJ00132.ptfa, 870 aa
 vs ./tmplib.26680 library

1768147 residues in  2168 sequences
  Expectation_n fit: rho(ln(x))= 6.2065+/-0.00566; mu= 13.2980+/- 0.377
 mean_var=162.8501+/-38.507, 0's: 0 Z-trim: 2  B-trim: 4 in 1/35
 Lambda= 0.1005

FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2
 join: 38, opt: 26, open/ext: -10/-2, width:  16
The best scores are:                                       opt bits E(2168)
mKIAA0191  ( 1556 res)   mbp19358                  (1556)  384   68 7.9e-12


>>mKIAA0191  ( 1556 res)   mbp19358                       (1556 aa)
 initn: 511 init1: 226 opt: 384  Z-score: 304.7  bits: 68.3 E(): 7.9e-12
Smith-Waterman score: 384;  34.167% identity (38.679% ungapped) in 240 aa overlap (337-563:952-1176)

        310       320       330       340       350       360      
mFLJ00 SLPPVSPLQEDRKEGKQGKELELAEEASKDEKEEAAAVLELVGSILRGCVPGVYRVQTVP
                                     :: .   ..: ...::.   ::.  .  . 
mKIAA0 LCLFGSSKNGFGFRDSDLDICMTLEGHENAEKLNCKEIIENLAKILKRH-PGLRNILPIT
             930       940       950       960       970        980

        370       380       390       400       410       420      
mFLJ00 SARRPVVKFCHRPSGLHGDVSLSNRLALYNSRFLNLCSEMDGRVRPLVYTLRCWAQHN--
       .:. :.::: :: :::.::.:: : :: .:.:.:   . .: ::. : ::.. .:..   
mKIAA0 TAKVPIVKFEHRRSGLEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCDI
              990      1000      1010      1020      1030      1040

          430       440       450       460       470          480 
mFLJ00 GLSGGGPLLNNYALTLLVIYFLQTRDPPVLPTVAQLTQRAGEGEQVE---VDGWDCSFPK
       : .. : : ..::  :.:.:::: : :::.:..    :.  .:.:.    ::::.  :  
mKIAA0 GDASRGSL-SSYAYILMVLYFLQQRKPPVIPVL----QEIFDGKQIPQRMVDGWNAFFFD
              1050      1060      1070          1080      1090     

                490            500       510       520       530   
mFLJ00 DASRLE---PST--NVEPLSSL---LAQFFSCVSCLDLSGSLLSLREGRPLMVAEGLPSD
        . .:.   ::   :.: :. :   : .:..    .:..  ..:.:. . : . :     
mKIAA0 KTEELKKRLPSLGKNTESLGELWLGLLRFYT--EEFDFKEYVISIRQKKLLTTFE----K
        1100      1110      1120        1130      1140             

           540       550       560       570       580       590   
mFLJ00 LWEGLRLGPMNLQDPFDLSHNVAANVTGRVAKRLQSCCGAAASYCRSLQYQQRSSRGRDW
        : .  ..   ..:::::.::..:.:. ...                             
mKIAA0 QWTSKCIA---IEDPFDLNHNLGAGVSRKMTNFIMKAFINGRKLFGTPFYPLIGREAEYF
    1150         1160      1170      1180      1190      1200      




870 residues in 1 query   sequences
1768147 residues in 2168 library sequences
 Scomplib [34t11]
 start: Mon Mar 27 10:07:12 2006 done: Mon Mar 27 10:07:13 2006
 Scan time:  0.990 Display time:  0.040

Function used was FASTA [version 3.4t11 Apr 17, 2002]