Comparison of KIAA cDNA sequences between mouse and human (FLJ00132)
<<Original sequence data>>
mouse mFLJ00132 (msh02074) length: 2654 bp, CDS: 1 - 2613
human (sh02007) length: 5060 bp, CDS: 2 - 1720
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: - - - -
CDS: 44 - 1732 1256 234 15.7
3'UTR: 1733 - 5051 615 555 47.4
amino acid
CDS: 44 - 1732 419 140 25.0
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
A M A
msh02074 1 ...........................................GCTATGG 7
|||||||
sh02007 1 GTGGTGGCAGAGGTGCTTGTGTTTTTGTCGGTACAGGAGAGTCGCTATGG 50
W W Q R C L C F C R Y R R V A M A
51 ----+----*----+----*----+----*----+----*----+----* 100
A V D S D V V S L P R G R F R C
msh02074 8 CGGCGGTGGATTCGGACGTTGTATCGCTGCCGCGTGGCCGCTTTCGCTGC 57
|||||||||||||||| || | ||||||||||||||| | || ||||||
sh02007 51 CGGCGGTGGATTCGGATGTCGAATCGCTGCCGCGTGGGGGGTTCCGCTGC 100
A V D S D V E S L P R G G F R C
101 ----+----*----+----*----+----*----+----*----+----* 150
C L C D V T T A N R P S L D A H L
msh02074 58 TGCCTCTGCGATGTTACTACAGCCAACCGACCCAGCCTCGATGCCCACTT 107
||||||||| | |||||||||||||||||||||||||| |||||||||||
sh02007 101 TGCCTCTGCCACGTTACTACAGCCAACCGACCCAGCCTTGATGCCCACTT 150
C L C H V T T A N R P S L D A H L
151 ----+----*----+----*----+----*----+----*----+----* 200
K G R K H R D L V Q L R A T R K A
msh02074 108 GAAAGGCCGGAAGCACCGGGATTTGGTGCAACTCCGAGCTACCAGGAAGG 157
| |||| | ||||||||| | |||| |||| |||||| | || ||||
sh02007 151 GGGAGGCAGAAAGCACCGGCACCTGGTAGAACTACGAGCTGCGAGAAAGG 200
G G R K H R H L V E L R A A R K A
201 ----+----*----+----*----+----*----+----*----+----* 250
Q G L R S V F V S G F P R D V G
msh02074 158 CACAGGGACTCCGAAGTGTGTTTGTCAGTGGCTTCCCCAGGGATGTGGGT 207
| |||||||| ||||||||||||||||||||||| ||||||||||||| |
sh02007 201 CCCAGGGACTTCGAAGTGTGTTTGTCAGTGGCTTTCCCAGGGATGTGGAT 250
Q G L R S V F V S G F P R D V D
251 ----+----*----+----*----+----*----+----*----+----* 300
S A Q L S E Y F Q T F G P V A N I
msh02074 208 TCTGCTCAGCTCTCTGAGTACTTCCAGACATTTGGCCCTGTGGCCAATAT 257
||||||||||||||||||||||||| ||||||| |||||||||| | |
sh02007 251 TCTGCTCAGCTCTCTGAGTACTTCCTAGCATTTGGACCTGTGGCCAGTGT 300
S A Q L S E Y F L A F G P V A S V
301 ----+----*----+----*----+----*----+----*----+----* 350
V M D K D K G V F A I V E M G D I
msh02074 258 TGTCATGGACAAGGACAAGGGGGTGTTTGCCATCGTGGAGATGGGAGACA 307
||||||||||||||||||||| ||||||||||| ||||||||||| |||
sh02007 301 TGTCATGGACAAGGACAAGGGAGTGTTTGCCATTGTGGAGATGGGGGACG 350
V M D K D K G V F A I V E M G D V
351 ----+----*----+----*----+----*----+----*----+----* 400
S A R E A V L S Q P K H S L G G
msh02074 308 TAAGTGCTCGGGAGGCTGTCTTATCACAGCCCAAGCACAGCCTTGGGGGA 357
| ||||||| ||||||||||| |||||| || |||||||||| || |||
sh02007 351 TGGGTGCTCGAGAGGCTGTCTTGTCACAGTCCCAGCACAGCCTGGGAGGA 400
G A R E A V L S Q S Q H S L G G
401 ----+----*----+----*----+----*----+----*----+----* 450
H G L R V R P R E Q K E F Q S P A
msh02074 358 CATGGACTTCGAGTCCGGCCAAGGGAGCAGAAGGAGTTCCAGAGCCCAGC 407
||| | || || ||||| ||| ||||||||||||||||||||||||| ||
sh02007 401 CATCGCCTGCGTGTCCGCCCACGGGAGCAGAAGGAGTTCCAGAGCCCGGC 450
H R L R V R P R E Q K E F Q S P A
451 ----+----*----+----*----+----*----+----*----+----* 500
S K S P K G V D S S S H Q L V Q A
msh02074 408 TTCCAAGTCTCCCAAAGGAGTGGACTCAAGTAGTCACCAGCTGGTCCAAG 457
||||| || |||||||||| || | | ||||||||||||| | |||
sh02007 451 CTCCAAATCCCCCAAAGGAGCGGCCCCCGACAGTCACCAGCTGGCCAAAG 500
S K S P K G A A P D S H Q L A K A
501 ----+----*----+----*----+----*----+----*----+----* 550
L A E A A D V G A Q M V K L V E
msh02074 458 CACTGGCTGAGGCTGCGGATGTGGGGGCCCAGATGGTGAAGCTTGTGGAA 507
| || ||||||||||| || |||||||| || ||| | ||||||||||
sh02007 501 CGCTAGCTGAGGCTGCAGACGTGGGGGCACAAATGATAAAGCTTGTGGGG 550
L A E A A D V G A Q M I K L V G
551 ----+----*----+----*----+----*----+----*----+----* 600
L R E L S E A E R Q L R N L V V A
msh02074 508 CTGAGGGAGTTGTCTGAGGCTGAGCGGCAGCTTCGGAACCTTGTTGTGGC 557
|||||||||||||| ||||| |||||||||||||| | ||| || |||||
sh02007 551 CTGAGGGAGTTGTCCGAGGCCGAGCGGCAGCTTCGCAGCCTAGTGGTGGC 600
L R E L S E A E R Q L R S L V V A
601 ----+----*----+----*----+----*----+----*----+----* 650
L M Q E V F T E F F P G C V V H P
msh02074 558 CCTGATGCAGGAGGTCTTCACAGAGTTCTTCCCTGGCTGTGTGGTCCATC 607
|||||||||||||||||||||||||||||||||||||||||||||||| |
sh02007 601 CCTGATGCAGGAGGTCTTCACAGAGTTCTTCCCTGGCTGTGTGGTCCACC 650
L M Q E V F T E F F P G C V V H P
651 ----+----*----+----*----+----*----+----*----+----* 700
F G S T V N S F D V H G C D L D
msh02074 608 CTTTTGGCTCTACTGTAAATAGCTTTGATGTTCATGGCTGTGATCTCGAC 657
||||||||||| | |||||||||| ||||| |||||||||||||| |||
sh02007 651 CTTTTGGCTCTTCCATAAATAGCTTCGATGTCCATGGCTGTGATCTTGAC 700
F G S S I N S F D V H G C D L D
701 ----+----*----+----*----+----*----+----*----+----* 750
L F L D M G D M E E T E P D P K A
msh02074 658 CTCTTCTTGGACATGGGTGATATGGAAGAGACCGAGCCAGACCCAAAGGC 707
||||||||||| ||||||| |||||||| || |||||| |||||||||
sh02007 701 CTCTTCTTGGATCTGGGTGACTTGGAAGAGCCCCAGCCAGTCCCAAAGGC 750
L F L D L G D L E E P Q P V P K A
751 ----+----*----+----*----+----*----+----*----+----* 800
P E T S S L D S A L A S S L
msh02074 708 TCCAAAGGTTCCAGAGACTTCATCCTTGGACTCAGCCCTTGCTTCTTCCC 757
|||||| || |||| ||||||| ||||| ||||| | |
sh02007 751 .........TCCAGAATCTCCATCGCTGGACTCGGCCCTGGCTTCCCCAC 791
P E S P S L D S A L A S P L
801 ----+----*----+----*----+----*----+----*----+----* 850
D P Q A L A C T P A S P L D S L
msh02074 758 TGGATCCTCAGGCGCTGGCCTGCACCCCAGCTTCTCCTCTAGACTCACTG 807
|||| ||||| || |||||||||||||||||||| |||| ||| ||||
sh02007 792 TGGACCCTCAAGCCCTGGCCTGCACCCCAGCTTCCCCTCCAGATTCACAA 841
D P Q A L A C T P A S P P D S Q
851 ----+----*----+----*----+----*----+----*----+----* 900
S P T S V Q E S E S L D F D T -
msh02074 808 TCTCCAACTTCTGTTCAAGAGTCTGAGTCCCTGGACTTTGACACCC...C 854
|||| ||||| || || ||||| ||||||||||||| |||| |
sh02007 842 CCTCCTGCTTCTCCCCAGGATTCTGAAGCCCTGGACTTTGAAACCCCTTC 891
P P A S P Q D S E A L D F E T P S
901 ----+----*----+----*----+----*----+----*----+----* 950
S S L A P Q T P D S A L G S D T V
msh02074 855 ATCTTCTCTGGCACCACAGACACCCGACTCTGCTTTGGGCTCTGACACTG 904
|| || ||||| || || || || |||||||| |||| ||| || ||
sh02007 892 CTCCTCCCTGGCGCCCCAAACTCCGGACTCTGCCTTGGCCTCCGAGACCC 941
S S L A P Q T P D S A L A S E T L
951 ----+----*----+----*----+----*----+----*----+----* 1000
T S P Q S L P P V S P L Q E D R
msh02074 905 TCACCTCTCCTCAGTCTCTGCCTCCAGTTTCACCACTGCAGGAGGACAGG 954
| | ||||| |||||||||||||||| ||||||||||| |||||||||
sh02007 942 TTGCTTCTCCCCAGTCTCTGCCTCCAGCTTCACCACTGCTAGAGGACAGG 991
A S P Q S L P P A S P L L E D R
1001 ----+----*----+----*----+----*----+----*----+----* 1050
K E G K Q G K E L E L A E A S K
msh02074 955 AAAGAGGGGAAACAGGGGAAAGAGCTAGAATTAGCAGAAGAAGCCTCAAA 1004
|||||||| | | |||||| | ||| |||| ||| || ||||
sh02007 992 GAAGAGGGGGACCTGGGGAAGGCCTCGGAACTAGC...AGAGACCCCAAA 1038
E E G D L G K A S E L A E T P K
1051 ----+----*----+----*----+----*----+----*----+----* 1100
D E K E E A A A V L E L V G S I L
msh02074 1005 GGACGAGAAGGAGGAGGCAGCAGCAGTGTTAGAGCTGGTGGGATCTATTC 1054
||| ||||| | |||| |||||| || | |||||||||||||| ||||
sh02007 1039 GGAGGAGAAAGCAGAGGGGGCAGCAATGCTGGAGCTGGTGGGATCCATTC 1088
E E K A E G A A M L E L V G S I L
1101 ----+----*----+----*----+----*----+----*----+----* 1150
R G C V P G V Y R V Q T V P S A
msh02074 1055 TCCGTGGCTGTGTCCCTGGAGTGTACCGAGTCCAAACTGTGCCCTCTGCC 1104
|||| |||||||||||||| ||||| ||||||||||||||||||||||||
sh02007 1089 TCCGGGGCTGTGTCCCTGGGGTGTATCGAGTCCAAACTGTGCCCTCTGCC 1138
R G C V P G V Y R V Q T V P S A
1151 ----+----*----+----*----+----*----+----*----+----* 1200
R R P V V K F C H R P S G L H G D
msh02074 1105 CGGCGTCCTGTGGTCAAGTTCTGTCATCGGCCTTCAGGTCTTCATGGAGA 1154
||||| ||||||||||||||||||||||||||||||||||| || || ||
sh02007 1139 CGGCGCCCTGTGGTCAAGTTCTGTCATCGGCCTTCAGGTCTCCACGGTGA 1188
R R P V V K F C H R P S G L H G D
1201 ----+----*----+----*----+----*----+----*----+----* 1250
V S L S N R L A L Y N S R F L N L
msh02074 1155 TGTATCCCTCAGTAACCGGTTGGCCTTATATAATTCACGTTTCCTGAATC 1204
||| ||||||||||||||| ||||| | |||| || |||||||||| ||
sh02007 1189 TGTCTCCCTCAGTAACCGGCTGGCCCTGCATAACTCCCGTTTCCTGAGTC 1238
V S L S N R L A L H N S R F L S L
1251 ----+----*----+----*----+----*----+----*----+----* 1300
C S E M D G R V R P L V Y T L R
msh02074 1205 TCTGCTCTGAGATGGATGGTCGAGTCCGGCCCCTTGTGTATACCTTACGC 1254
||||||||||| |||||||||||||||||||||| ||||| ||| | |||
sh02007 1239 TCTGCTCTGAGCTGGATGGTCGAGTCCGGCCCCTCGTGTACACCCTCCGC 1288
C S E L D G R V R P L V Y T L R
1301 ----+----*----+----*----+----*----+----*----+----* 1350
C W A Q H N G L S G G G P L L N N
msh02074 1255 TGCTGGGCTCAGCATAATGGGCTGTCAGGAGGTGGCCCCCTTCTCAATAA 1304
|||||||||||| | ||||||||||| ||||||||||||||| |||
sh02007 1289 TGCTGGGCTCAGGGTCGGGGGCTGTCAGGGAGTGGCCCCCTTCTCAGTAA 1338
C W A Q G R G L S G S G P L L S N
1351 ----+----*----+----*----+----*----+----*----+----* 1400
Y A L T L L V I Y F L Q T R D P P
msh02074 1305 CTACGCCTTGACGTTGTTAGTGATCTACTTCCTTCAGACCAGAGACCCTC 1354
||||||| |||| ||| | |||||||| || ||||||||||| |||||||
sh02007 1339 CTACGCCCTGACCTTGCTGGTGATCTATTTTCTTCAGACCAGGGACCCTC 1388
Y A L T L L V I Y F L Q T R D P P
1401 ----+----*----+----*----+----*----+----*----+----* 1450
V L P T V A Q L T Q R A G E G E
msh02074 1355 CAGTACTTCCTACTGTGGCCCAGCTTACCCAGAGAGCAGGTGAAGGGGAA 1404
| || | || |||||| ||||||| ||||||| |||||| || ||||||
sh02007 1389 CTGTGTTGCCCACTGTGTCCCAGCTCACCCAGAAAGCAGGAGAGGGGGAA 1438
V L P T V S Q L T Q K A G E G E
1451 ----+----*----+----*----+----*----+----*----+----* 1500
Q V E V D G W D C S F P K D A S R
msh02074 1405 CAGGTAGAAGTTGATGGCTGGGACTGTAGCTTCCCTAAGGATGCCTCAAG 1454
||||| ||||| |||||||||||||| || ||||| | ||||||||||||
sh02007 1439 CAGGTGGAAGTCGATGGCTGGGACTGCAGTTTCCCCAGGGATGCCTCAAG 1488
Q V E V D G W D C S F P R D A S R
1501 ----+----*----+----*----+----*----+----*----+----* 1550
L E P S T N V E P L S S L L -
msh02074 1455 ATTGGAGCCCAGCACCAACGTGGAGCCTCTCAGTTCCCTGCTGG...... 1498
| |||||||||||| || |||||||| |||| | | ||| |
sh02007 1489 ACTGGAGCCCAGCATAAATGTGGAGCCCCTCATTCGCACGCTCGAGGGGA 1538
L E P S I N V E P L I R T L E G S
1551 ----+----*----+----*----+----*----+----*----+----* 1600
msh02074 1499 .................................................. 1499
sh02007 1539 GTGCGGGGGCAGCACCGCGCGTGGCACCTGGCACCCGCGCAGAGTTCCTG 1588
A G A A P R V A P G T R A E F L
1601 ----+----*----+----*----+----*----+----*----+----* 1650
msh02074 1499 .................................................. 1499
sh02007 1589 AATGGCAGAGCGGTGGGTGGCTCCAGCAGTACTGAGAAGAGCCAGGTTTG 1638
N G R A V G G S S S T E K S Q V C
1651 ----+----*----+----*----+----*----+----*----+----* 1700
msh02074 1499 .................................................. 1499
sh02007 1639 CCTCCACATTCTTCCTGTCGCCTCAGATTTATGCGCACAAGGACGGAGAT 1688
L H I L P V A S D L C A Q G R R F
1701 ----+----*----+----*----+----*----+----*----+----* 1750
msh02074 1499 ..............................................CCCA 1502
||
sh02007 1689 TTGCGTTCAGCGTTCTTCATTCTCTCCTTTAAACGAGGAGAGTTCATCCC 1738
A F S V L H S L L *
1751 ----+----*----+----*----+----*----+----*----+----* 1800
msh02074 1503 GTTCTTCTCCTGCGTATCTTGCTTGGATCTT................... 1533
|||||| ||| ||| || | | |
sh02007 1739 GTTCTTAAACTGGGTAAGAGATTTCAAACCTGAACATGGGTCAAAAGCCA 1788
1801 ----+----*----+----*----+----*----+----*----+----* 1850
msh02074 1534 .................................................. 1534
sh02007 1789 TGAACATCAGAAGCGACGATGTCAGGTCTTCCAGCGTCAGCCCCTCCAGG 1838
1851 ----+----*----+----*----+----*----+----*----+----* 1900
msh02074 1534 .................................TCTGGCTCCCTGCTGTC 1550
| |||||| ||||
sh02007 1839 GGCCGAGTCCGGAGGAGGTGGGAGGGACAGGGCGCGTTCTCCCTCATGTC 1888
1901 ----+----*----+----*----+----*----+----*----+----* 1950
msh02074 1551 CCTGCGGGAAGGTCGGCCATTGATGGTGGCAGAGGGCCTGCCTTCTGATC 1600
||| ||| | | | | | ||||||| | ||| ||
sh02007 1889 CCT............GCCCTGCTTCGGGCCGGAGGGCCGGTGCCCTGCTC 1926
1951 ----+----*----+----*----+----*----+----*----+----* 2000
msh02074 1601 TCTG.............................................. 1604
| |
sh02007 1927 GCAGTAACAGCACCCTGGAGCTGTCAGGGGTTGGATGTGAGCAAACCTCA 1976
2001 ----+----*----+----*----+----*----+----*----+----* 2050
msh02074 1605 .................................................. 1605
sh02007 1977 CTTTGGCAGGCGGGTTCAGACCGGGGCCCCTGTTAGACGCTCATCCCTTT 2026
2051 ----+----*----+----*----+----*----+----*----+----* 2100
msh02074 1605 .................................................. 1605
sh02007 2027 CTGGAGGAAAAGCAGAGCAGGAACTAAAGGGATTTAGCACACACACTGCC 2076
2101 ----+----*----+----*----+----*----+----*----+----* 2150
msh02074 1605 ........GGAAGGGCTGCGCCTTGGCCCCATGAATCTCCAGGACCCCTT 1646
| | |||| ||| | ||||||| | || || | |
sh02007 2077 ACCTCCGCGCAGCAGCTGTTCCTCGCTCCCATGAGTTTCATAGAATCATG 2126
2151 ----+----*----+----*----+----*----+----*----+----* 2200
msh02074 1647 TGACCTGAGTCACAA................................... 1661
||| | | |||
sh02007 2127 TGAGGGGCTTGGCAAAATCTACCATCAAGTCACTTGTCCCTGGGAGGGCC 2176
2201 ----+----*----+----*----+----*----+----*----+----* 2250
msh02074 1662 ......TGTTGCAGCCAATGTGACCGGCCGGG.................. 1687
| || ||| | || ||||| |
sh02007 2177 AGAGAGGGACGCCCCCAGTAGCACTGGCCGCGCCGGGCCAACAACCGCGC 2226
2251 ----+----*----+----*----+----*----+----*----+----* 2300
msh02074 1688 .................................................. 1688
sh02007 2227 CACGTAGCCAAGAACTCGCGGCTTTTCCAGCGGGTTCTCACAACTTCCCC 2276
2301 ----+----*----+----*----+----*----+----*----+----* 2350
msh02074 1688 .............TGGCTAAACGTCTGCAGAGCTGTTGTGGGGCAGCAGC 1724
| || |||||| | | ||| || ||| |
sh02007 2277 GCCTCACGCTGTCTACCTCCACGTCTAGACTCCGATTGGCCCGCTGCACC 2326
2351 ----+----*----+----*----+----*----+----*----+----* 2400
msh02074 1725 CAGTTACTGCCGAAGTCTCCAGTACCA.........GCAGCGTTCCTCCC 1765
| | |||| || ||| | | | | | ||
sh02007 2327 TGGGGGGCGGGCCAGTCAAGAGCTCCAATGCGCAGGCCCGAGCTTTTTCC 2376
2401 ----+----*----+----*----+----*----+----*----+----* 2450
msh02074 1766 GGGGCCGGGACTGGGGACTGCTCCCGC......TTTTGCAGCCCAGCTCC 1809
| | | | || | | | | | |||| || |||| ||
sh02007 2377 GCGCTGGCCAGCAGGCCCCACCCACCCAGTTCTTTTTCCAATTCAGCGCC 2426
2451 ----+----*----+----*----+----*----+----*----+----* 2500
msh02074 1810 CCTAGCTCC......................................... 1818
|| | | |
sh02007 2427 ACTGGATACCGAACTGTCGTACGTATGTCTTCTGTTTCGTCCTCGCTTTC 2476
2501 ----+----*----+----*----+----*----+----*----+----* 2550
msh02074 1819 ...CTGCTGTCT.GCCAAGCTCATCCCCTTACCCTCTGCCCCCTTTCCAC 1864
||||||| | ||| | ||| ||| ||| || || || |||
sh02007 2477 CGGCTGCTGTTTCTCCACGGCTCTCCTCTTTCCCCCTCCCTTCTCTCCCG 2526
2551 ----+----*----+----*----+----*----+----*----+----* 2600
msh02074 1865 AGGTCATTA......................................... 1873
| |||
sh02007 2527 GGCGGCTTACTTTGCGGCAGCGCCGAGAACCCCACCCCCTTTCTTTGCGG 2576
2601 ----+----*----+----*----+----*----+----*----+----* 2650
msh02074 1874 .............................TGGCTTTGGTGGATGTGTTAA 1894
||||| |||||| | | | |
sh02007 2577 AATCACCATGGCGGCTGGGGTAAGTTTGCTGGCTCTGGTGGTTCGGGTCA 2626
2651 ----+----*----+----*----+----*----+----*----+----* 2700
msh02074 1895 .................................................. 1895
sh02007 2627 TCCTATCCACCGCCATCCTTTGCCCGAGTGGGGCCAGTCGGCGCCAGAGG 2676
2701 ----+----*----+----*----+----*----+----*----+----* 2750
msh02074 1895 .................................................. 1895
sh02007 2677 AGTTCTGAGGTTGAGTGGGGAACTGATTCGGGGGTCTACAGACTGTACTG 2726
2751 ----+----*----+----*----+----*----+----*----+----* 2800
msh02074 1895 .................................................. 1895
sh02007 2727 CTGGAGAGTAGGGTTCCTAGGGCCTGGAGGGGAACTGAGGCTGGGGCTCT 2776
2801 ----+----*----+----*----+----*----+----*----+----* 2850
msh02074 1895 ...GGGAAGCACTAGGATGCCACATAGAACAGGGAACCAAGAGACGACGG 1941
|| | ||| | | | | ||| |||||| | |||
sh02007 2777 CGGAGGCCAGAGGTGGAAGGGTCTGGGGAAGAGGAGAAAAGAGATGCCGG 2826
2851 ----+----*----+----*----+----*----+----*----+----* 2900
msh02074 1942 TCAGAAGGTGCCAGAA................................TT 1959
| | | ||| ||
sh02007 2827 GTCTGGGCCGTCCGAAGCCTGAGAAAGGGGTTCGGCTCTGTTGCCGCTTT 2876
2901 ----+----*----+----*----+----*----+----*----+----* 2950
msh02074 1960 AAAGACTCTCCCTTGGGAGGGGTGAACAA..................... 1988
| | | |||| || ||| ||
sh02007 2877 GAGGCGTGGTATCTGGGCAGGTTGACGAACTTCTGTGTCCGTTTTGTGGA 2926
2951 ----+----*----+----*----+----*----+----*----+----* 3000
msh02074 1989 ..AAGACAGAGACTTGGTGGGCAAGAAAAGAGCTTCGAGGAAGG...... 2030
|| |||| | ||| | || | | || ||| |||
sh02007 2927 GTAACACAGGGGACAGGTTGAAGAGGAGGGTCTTTGTAGGCAGGTCCGGC 2976
3001 ----+----*----+----*----+----*----+----*----+----* 3050
msh02074 2031 .....................................GAAAGAGGAGCCA 2043
| |||||| |
sh02007 2977 TGGCACGGTTAAAGGTCGTCTCTCAGGAGGTTTGGGAGCGAGAGGATTCT 3026
3051 ----+----*----+----*----+----*----+----*----+----* 3100
msh02074 2044 CAGGGATGTG........................................ 2053
| || |||
sh02007 3027 CCGGACAGTGAAGTCAGACCAATTGGACTCCGCTGGCCGGCATAATAGAG 3076
3101 ----+----*----+----*----+----*----+----*----+----* 3150
msh02074 2054 .................................................. 2054
sh02007 3077 AAGCCCAACGCCGGGGAACTCGCTGCGGGACAGGACCGGAGGGATGATAT 3126
3151 ----+----*----+----*----+----*----+----*----+----* 3200
msh02074 2054 ......CAGGGGACCACAGTGAAAATGAGGTAGAAGAAATGGTAATAGAG 2097
|| || | | || |||| ||| || || | |||
sh02007 3127 TCGCGACACGGAAAGAAAGGCTTTTTGAGAGAGAGGAGTTGATTTAAGAA 3176
3201 ----+----*----+----*----+----*----+----*----+----* 3250
msh02074 2098 GTTCGAGAGACACCTCAGGACTGGGCCTTGT................... 2128
| | | || | | || | || ||
sh02007 3177 GACGGCATGCCATCCCCTATCTCTGGCTAGTCTGAGGGGAACTAGAAATC 3226
3251 ----+----*----+----*----+----*----+----*----+----* 3300
msh02074 2129 .................................................. 2129
sh02007 3227 TCTCGATCGTCGTGCGTGCCTTAGAGACAGGACGATGCTTTTGAAGCGGT 3276
3301 ----+----*----+----*----+----*----+----*----+----* 3350
msh02074 2129 .........................TGCACTCGGGACCACCAGAGGA... 2150
|| ||||| |||| || | |
sh02007 3277 GAGCAGCTGAGCAGTAGAGTAGGCAGGCGCTCGGAACCATCAATGAATGA 3326
3351 ----+----*----+----*----+----*----+----*----+----* 3400
msh02074 2151 ..GGAGTTGCCCCTGATGACTGCAAACTGTCTAGACAAGGCAGCTGAGCA 2198
||| || || | | | | | | | | | |||
sh02007 3327 AGCGAGGGCTCCGGGAAGGGAGGAGAGTATGTTTGTAGGCAGATGGAGTC 3376
3401 ----+----*----+----*----+----*----+----*----+----* 3450
msh02074 2199 TAAT...CCCATGAAACCTGAAGTGGCTGGAGAAGGGTCTCAGGGTGAGA 2245
| || | | | ||| | | |||||| | | | || | |||
sh02007 3377 TGATGGAGCTAGAAGTTCTGGATTTCTTGGAGATAGATTTGAGAGGAAGA 3426
3451 ----+----*----+----*----+----*----+----*----+----* 3500
msh02074 2246 CA................................................ 2247
|
sh02007 3427 GAATACTTCCAGAGGTGTCCTTAGGGAAGGTCAAATCTGTCAACAAGCTT 3476
3501 ----+----*----+----*----+----*----+----*----+----* 3550
msh02074 2248 .................................................. 2248
sh02007 3477 TATTTAGCAGTTGGTGTGTAGTTCTGTTCTTGGTATTTCGGAGGATTCTG 3526
3551 ----+----*----+----*----+----*----+----*----+----* 3600
msh02074 2248 .................................................. 2248
sh02007 3527 ATTACATATGACAAGTACTAAAGGACTTGGTTCACCAGAGGAAGTAAAAG 3576
3601 ----+----*----+----*----+----*----+----*----+----* 3650
msh02074 2248 .................................................. 2248
sh02007 3577 GGTGAGTTGAATACATTGGGATTATTCAGGAAAGTCATCCTGGAGAGTGG 3626
3651 ----+----*----+----*----+----*----+----*----+----* 3700
msh02074 2248 .................................................. 2248
sh02007 3627 CATTAAGGACTGGGACCCTTCTACTCATTAATTTTGTCCCTCTCTTTCTC 3676
3701 ----+----*----+----*----+----*----+----*----+----* 3750
msh02074 2248 .................................................. 2248
sh02007 3677 CCATAGACCCTGTACACGTATCCTGAAAACTGGAGGGCCTTCAAGGCTCT 3726
3751 ----+----*----+----*----+----*----+----*----+----* 3800
msh02074 2248 .................................................. 2248
sh02007 3727 CATCGCTGCTCAGTACAGCGGGGCTCAGGTCCGCGTGCTCTCCGCACCAC 3776
3801 ----+----*----+----*----+----*----+----*----+----* 3850
msh02074 2248 .................................................. 2248
sh02007 3777 CCCACTTCCATTTTGGCCAAACCAACCGCACCCCTGAATTTCTCCGCAAA 3826
3851 ----+----*----+----*----+----*----+----*----+----* 3900
msh02074 2248 .................................................. 2248
sh02007 3827 TTTCCTGCCGGCAAGGTCCCAGCATTTGAGGGTGATGATGGATTCTGTGT 3876
3901 ----+----*----+----*----+----*----+----*----+----* 3950
msh02074 2248 .................................................. 2248
sh02007 3877 GTTTGAGAGCAACGCCATTGCCTACTATGTGAGCAATGAGGAGCTGCGGG 3926
3951 ----+----*----+----*----+----*----+----*----+----* 4000
msh02074 2248 .................................................. 2248
sh02007 3927 GAAGTACTCCAGAGGCAGCAGCCCAGGTGGTGCAGTGGGTGAGCTTTGCT 3976
4001 ----+----*----+----*----+----*----+----*----+----* 4050
msh02074 2248 ...............................................GGG 2250
|||
sh02007 3977 GATTCCGATATAGTGCCCCCAGCCAGTACCTGGGTGTTCCCCACCTTGGG 4026
4051 ----+----*----+----*----+----*----+----*----+----* 4100
msh02074 2251 AAGGAGGCATCACACCCATCA..TCAGTGAGCTGGCGCTGTGCCTTGTGG 2298
| | ||| |||| | | || || |||| || | |||
sh02007 4027 CATCATGCACCACAACAAACAGGCCACTGAGAATGCAAAGGAGGAAGTGA 4076
4101 ----+----*----+----*----+----*----+----*----+----* 4150
msh02074 2299 CACCAAGTATGGCAGGGGAGGCGGCGTGCCCGGAGACGATTA........ 2340
| || | ||| | || || | | | |||||| |
sh02007 4077 GGCGAATTCTGGGGCTGCTGGATGCTTACTTGAAGACGAGGACTTTTCTG 4126
4151 ----+----*----+----*----+----*----+----*----+----* 4200
msh02074 2341 .................................................. 2341
sh02007 4127 GTGGGCGAACGAGTGACATTGGCTGACATCACAGTTGTCTGCACCCTGTT 4176
4201 ----+----*----+----*----+----*----+----*----+----* 4250
msh02074 2341 .................................................. 2341
sh02007 4177 GTGGCTCTATAAGCAGGTTCTAGAGCCTTCTTTCCGCCAGGCCTTTCCCA 4226
4251 ----+----*----+----*----+----*----+----*----+----* 4300
msh02074 2341 ................................CAGCAACAAACCAAGG.. 2356
|||| || | ||
sh02007 4227 ATACCAACCGCTGGTTCCTCACCTGCATTAACCAGCCCCAGTTCCGGGCT 4276
4301 ----+----*----+----*----+----*----+----*----+----* 4350
msh02074 2357 ................................................AA 2358
||
sh02007 4277 GTCTTGGGGGAAGTGAAACTGTGTGAGAAGATGGCCCAGTTTGATGCTAA 4326
4351 ----+----*----+----*----+----*----+----*----+----* 4400
msh02074 2359 GAAGGTAGAGGAGGTCCCACCACAGGAGCAGAGTGGCTGGCAATGGAAGC 2408
||| | | ||| || ||| | || | | || || ||||
sh02007 4327 AAAGTTTGCAGAGACCCAACCTAAAAAGGACACACCACGGAAAGAGAAGG 4376
4401 ----+----*----+----*----+----*----+----*----+----* 4450
msh02074 2409 TCGTGTGACCCAGGAACTAAAAGGACCCAATAGTGAGCAAG..AGAGGCC 2456
| ||| | ||| || | | | ||| |||
sh02007 4377 GTTCACGGGAAGAGAAGCAGAAGCCCCAGGCTGAGCGGAAGGAGGAGAAA 4426
4451 ----+----*----+----*----+----*----+----*----+----* 4500
msh02074 2457 GCCGGGGGAGCCCCTCCTC............................... 2475
| || |||||| |||
sh02007 4427 AAGGCGGCTGCCCCTGCTCCTGAGGAGGAGATGGATGAATGTGAGCAGGC 4476
4501 ----+----*----+----*----+----*----+----*----+----* 4550
msh02074 2476 .................................................. 2476
sh02007 4477 GCTGGCTGCTGAGCCCAAGGCCAAGGACCCCTTCGCTCACCTGCCCAAGA 4526
4551 ----+----*----+----*----+----*----+----*----+----* 4600
msh02074 2476 ..AGCTTTGTGGCATCTGCCTCCCAG............GCTGAGCAGACA 2511
| ||||||| || | || |||| | |||
sh02007 4527 GTACCTTTGTGTTGGATGAATTTAAGCGCAAGTACTCCAATGAGGACACA 4576
4601 ----+----*----+----*----+----*----+----*----+----* 4650
msh02074 2512 CTCACTGTGGCCC..................................... 2524
||| ||||||| |
sh02007 4577 CTCTCTGTGGCACTGCCATATTTCTGGGAGCACTTTGATAAGGACGGCTG 4626
4651 ----+----*----+----*----+----*----+----*----+----* 4700
msh02074 2525 .................................................. 2525
sh02007 4627 GTCCCTGTGGTACTCAGAGTATCGCTTCCCTGAAGAACTCACTCAGACCT 4676
4701 ----+----*----+----*----+----*----+----*----+----* 4750
msh02074 2525 .................................................. 2525
sh02007 4677 TCATGAGCTGCAATCTCATCACTGGAATGTTCCAGCGACTGGACAAGCTG 4726
4751 ----+----*----+----*----+----*----+----*----+----* 4800
msh02074 2525 .................................................. 2525
sh02007 4727 AGGAAGAATGCCTTCGCCAGTGTCATCCTTTTTGGAACCAACAATAGCAG 4776
4801 ----+----*----+----*----+----*----+----*----+----* 4850
msh02074 2525 ...........CACTCCAGGACTCCCAAGGCCTGTTCCCTGGTCTTCATC 2563
| || || || || ||||| | | || ||| |
sh02007 4777 CTCCATTTCTGGAGTCTGGGTCTTCCGAGGCCAGGAGCTTGCCTTTCCGC 4826
4851 ----+----*----+----*----+----*----+----*----+----* 4900
msh02074 2564 ATTTTCTACA........................................ 2573
|| | |
sh02007 4827 TGAGTCCAGATTGGCAGGTGGACTACGAGTCATACACATGGCGGAAACTG 4876
4901 ----+----*----+----*----+----*----+----*----+----* 4950
msh02074 2574 .................................................. 2574
sh02007 4877 GATCCTGGCAGCGAGGAGACCCAGACGCTGGTTCGAGAGTACTTTTCCTG 4926
4951 ----+----*----+----*----+----*----+----*----+----* 5000
msh02074 2574 ....................GGGTTTTATCCCTCAAGCACTTAAAAATCT 2603
|| | || |||| || || ||||
sh02007 4927 GGAGGGGGCCTTCCAGCATGTGGGCAAAGCCTTCAATCAGGGCAAGATCT 4976
5001 ----+----*----+----*----+----*----+----*----+----* 5050
msh02074 2604 CCTCAAGTGAGGAACCAAACCTCAAAAACAATAAAGCTGCTAGTTTATTT 2653
|||||||| | | | || | | | |||| | ||
sh02007 4977 ..TCAAGTGAACATCTCTTGC.CATCACCTAGCTGCCTGCACCTGCCCTT 5023
5051 ----+----*----+----*----+----*----+-- 5087
msh02074 2654 C.................................... 2654
|
sh02007 5024 CAGGGAGATGGGGGTCATTAAAGGAAACTGAACATTG 5060