# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/msh01286.fasta.nr -Q ../query/mFLJ00385.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mFLJ00385, 303 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7910105 sequences Expectation_n fit: rho(ln(x))= 5.3087+/-0.000183; mu= 8.7108+/- 0.010 mean_var=72.4812+/-13.907, 0's: 47 Z-trim: 106 B-trim: 91 in 2/65 Lambda= 0.150647 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|47847526|dbj|BAD21435.1| mFLJ00385 protein [Mus ( 303) 2070 458.7 5.9e-127 gi|121044|sp|P03987.2|IGHG3_MOUSE RecName: Full=Ig ( 398) 2064 457.5 1.8e-126 gi|558122|gb|AAB59697.1| immunoglobulin gamma cons ( 326) 1605 357.7 1.7e-96 gi|1799551|dbj|BAA11356.1| Ig gamma-chain, secrete ( 329) 1605 357.7 1.7e-96 gi|50346340|gb|AAT74921.1| anti-CMV coat protein m ( 461) 1605 357.8 2.2e-96 gi|1794157|dbj|BAA04205.1| immunoglobulin heavy ch ( 461) 1605 357.8 2.2e-96 gi|1304160|dbj|BAA03476.1| immunoglobulin gamma-3 ( 470) 1605 357.8 2.2e-96 gi|33417043|gb|AAH55910.1| Expressed sequence AI32 ( 470) 1605 357.8 2.2e-96 gi|149044000|gb|EDL97382.1| rCG27696 [Rattus norve ( 265) 1545 344.6 1.2e-92 gi|148686605|gb|EDL18552.1| mCG147639, isoform CRA ( 398) 1541 343.8 3e-92 gi|62901522|sp|P01865.3|GCAM_MOUSE RecName: Full=I ( 398) 1540 343.6 3.5e-92 gi|149263752|ref|XP_001472591.1| PREDICTED: simila ( 421) 1540 343.6 3.6e-92 gi|1799560|dbj|BAA11363.1| membrane-bound-type Ig ( 445) 1512 337.6 2.6e-90 gi|21748616|dbj|BAC03445.1| FLJ00385 protein [Homo ( 509) 1508 336.7 5.3e-90 gi|34536020|dbj|BAC87509.1| unnamed protein produc ( 577) 1508 336.8 5.8e-90 gi|119602340|gb|EAW81934.1| hCG2029987 [Homo sapie ( 398) 1504 335.8 7.9e-90 gi|34535607|dbj|BAC87374.1| unnamed protein produc ( 539) 1504 335.9 1e-89 gi|17512136|gb|AAH19046.1| IGHG1 protein [Homo sap ( 544) 1496 334.1 3.4e-89 gi|109085083|ref|XP_001100439.1| PREDICTED: immuno ( 438) 1492 333.2 5.2e-89 gi|145203137|gb|ABP35935.1| immunoglobulin heavy c ( 392) 1469 328.2 1.5e-87 gi|26334307|dbj|BAC30871.1| unnamed protein produc ( 419) 1464 327.1 3.4e-87 gi|34535785|dbj|BAC87432.1| unnamed protein produc ( 541) 1460 326.3 7.6e-87 gi|194435|gb|AAB59657.1| Ig gamma-1 chain C region ( 392) 1457 325.6 9.3e-87 gi|121038|sp|P01869.2|IGH1M_MOUSE RecName: Full=Ig ( 393) 1457 325.6 9.3e-87 gi|194360544|emb|CAO79577.1| immunoglobulin heavy ( 304) 1437 321.1 1.5e-85 gi|62901523|sp|P01867.3|IGG2B_MOUSE RecName: Full= ( 404) 1432 320.1 4.1e-85 gi|149263750|ref|XP_001001076.2| PREDICTED: simila ( 431) 1432 320.2 4.3e-85 gi|194228715|ref|XP_001496515.2| PREDICTED: immuno ( 510) 1404 314.1 3.4e-83 gi|194360542|emb|CAO79575.1| immunoglobulin heavy ( 398) 1400 313.2 5e-83 gi|194360538|emb|CAO79571.1| immunoglobulin heavy ( 318) 1388 310.5 2.6e-82 gi|194360540|emb|CAO79573.1| immunoglobulin heavy ( 405) 1388 310.6 3.1e-82 gi|6687182|emb|CAB64865.1| immunoglobulin heavy ch ( 323) 1376 307.9 1.6e-81 gi|109133460|ref|XP_001099592.1| PREDICTED: immuno ( 413) 1318 295.4 1.2e-77 gi|21304450|emb|CAD32498.1| immunoglobulin gamma1 ( 502) 1318 295.4 1.4e-77 gi|121056|sp|P20762.1|IGG2C_RAT RecName: Full=Ig g ( 329) 1251 280.7 2.4e-73 gi|71051338|gb|AAH98733.1| LOC362795 protein [Ratt ( 470) 1251 280.9 3.2e-73 gi|6491882|gb|AAF14059.1| Mamu IgG-rh3 heavy chain ( 353) 1167 262.5 8e-68 gi|148686604|gb|EDL18551.1| mCG147639, isoform CRA ( 329) 1132 254.9 1.5e-65 gi|194438|gb|AAB59660.1| immunoglobulin gamma 2A c ( 329) 1131 254.7 1.7e-65 gi|121048|sp|P01863.1|GCAA_MOUSE RecName: Full=Ig ( 330) 1131 254.7 1.7e-65 gi|26665400|dbj|BAC44883.1| immunoglobulin gamma-2 ( 466) 1131 254.8 2.3e-65 gi|27127160|gb|AAN86780.1| immunoglobulin heavy ch ( 469) 1131 254.8 2.3e-65 gi|480895|pir||S37483 Ig gamma-2a chain - mouse ( 469) 1131 254.8 2.3e-65 gi|34784630|gb|AAH57672.1| Igh protein [Mus muscul ( 464) 1130 254.5 2.6e-65 gi|21594583|gb|AAH31470.1| Igh protein [Mus muscul ( 464) 1126 253.7 4.8e-65 gi|17390662|gb|AAH18280.1| Igh protein [Mus muscul ( 465) 1126 253.7 4.8e-65 gi|63100280|gb|AAH94467.1| Igh-1a protein [Mus mus ( 468) 1126 253.7 4.8e-65 gi|13278043|gb|AAH03878.1| Ighg protein [Mus muscu ( 468) 1126 253.7 4.8e-65 gi|62204132|gb|AAH92271.1| Igh-1a protein [Mus mus ( 468) 1126 253.7 4.8e-65 gi|51593434|gb|AAH80671.1| Igh protein [Mus muscul ( 471) 1126 253.7 4.9e-65 >>gi|47847526|dbj|BAD21435.1| mFLJ00385 protein [Mus mus (303 aa) initn: 2070 init1: 2070 opt: 2070 Z-score: 2435.5 bits: 458.7 E(): 5.9e-127 Smith-Waterman score: 2070; 100.000% identity (100.000% similar) in 303 aa overlap (1-303:1-303) 10 20 30 40 50 60 mFLJ00 EEPRIPKPSTPPGSSCPPGNILGGPSVFIFPPKPKDALMISLTPKVTCVVVDVSEDDPDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 EEPRIPKPSTPPGSSCPPGNILGGPSVFIFPPKPKDALMISLTPKVTCVVVDVSEDDPDV 10 20 30 40 50 60 70 80 90 100 110 120 mFLJ00 HVSWFVDNKEVHTAWTQPREAQYNSTFRVVSALPIQHQDWMRGKEFKCKVNNKALPAPIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 HVSWFVDNKEVHTAWTQPREAQYNSTFRVVSALPIQHQDWMRGKEFKCKVNNKALPAPIE 70 80 90 100 110 120 130 140 150 160 170 180 mFLJ00 RTISKPKGRAQTPQVYTIPPPREQMSKKKVSLTCLVTNFFSEAISVEWERNGELEQDYKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 RTISKPKGRAQTPQVYTIPPPREQMSKKKVSLTCLVTNFFSEAISVEWERNGELEQDYKN 130 140 150 160 170 180 190 200 210 220 230 240 mFLJ00 TPPILDSDGTYFLYSKLTVDTDSWLQGEIFTCSVVHEALHNHHTQKNLSRSPELELNETC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 TPPILDSDGTYFLYSKLTVDTDSWLQGEIFTCSVVHEALHNHHTQKNLSRSPELELNETC 190 200 210 220 230 240 250 260 270 280 290 300 mFLJ00 AEAQDGELDGLWTTITIFISLFLLSVCYSASVTLFKVKWIFSSVVQVKQTAIPDYRNMIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|478 AEAQDGELDGLWTTITIFISLFLLSVCYSASVTLFKVKWIFSSVVQVKQTAIPDYRNMIG 250 260 270 280 290 300 mFLJ00 QGA ::: gi|478 QGA >>gi|121044|sp|P03987.2|IGHG3_MOUSE RecName: Full=Ig gam (398 aa) initn: 2064 init1: 2064 opt: 2064 Z-score: 2426.8 bits: 457.5 E(): 1.8e-126 Smith-Waterman score: 2064; 100.000% identity (100.000% similar) in 302 aa overlap (2-303:97-398) 10 20 30 mFLJ00 EEPRIPKPSTPPGSSCPPGNILGGPSVFIFP :::::::::::::::::::::::::::::: gi|121 VTVPSSTWPSQTVICNVAHPASKTELIKRIEPRIPKPSTPPGSSCPPGNILGGPSVFIFP 70 80 90 100 110 120 40 50 60 70 80 90 mFLJ00 PKPKDALMISLTPKVTCVVVDVSEDDPDVHVSWFVDNKEVHTAWTQPREAQYNSTFRVVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|121 PKPKDALMISLTPKVTCVVVDVSEDDPDVHVSWFVDNKEVHTAWTQPREAQYNSTFRVVS 130 140 150 160 170 180 100 110 120 130 140 150 mFLJ00 ALPIQHQDWMRGKEFKCKVNNKALPAPIERTISKPKGRAQTPQVYTIPPPREQMSKKKVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|121 ALPIQHQDWMRGKEFKCKVNNKALPAPIERTISKPKGRAQTPQVYTIPPPREQMSKKKVS 190 200 210 220 230 240 160 170 180 190 200 210 mFLJ00 LTCLVTNFFSEAISVEWERNGELEQDYKNTPPILDSDGTYFLYSKLTVDTDSWLQGEIFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|121 LTCLVTNFFSEAISVEWERNGELEQDYKNTPPILDSDGTYFLYSKLTVDTDSWLQGEIFT 250 260 270 280 290 300 220 230 240 250 260 270 mFLJ00 CSVVHEALHNHHTQKNLSRSPELELNETCAEAQDGELDGLWTTITIFISLFLLSVCYSAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|121 CSVVHEALHNHHTQKNLSRSPELELNETCAEAQDGELDGLWTTITIFISLFLLSVCYSAS 310 320 330 340 350 360 280 290 300 mFLJ00 VTLFKVKWIFSSVVQVKQTAIPDYRNMIGQGA :::::::::::::::::::::::::::::::: gi|121 VTLFKVKWIFSSVVQVKQTAIPDYRNMIGQGA 370 380 390 >>gi|558122|gb|AAB59697.1| immunoglobulin gamma constant (326 aa) initn: 1605 init1: 1605 opt: 1605 Z-score: 1888.9 bits: 357.7 E(): 1.7e-96 Smith-Waterman score: 1605; 100.000% identity (100.000% similar) in 231 aa overlap (2-232:94-324) 10 20 30 mFLJ00 EEPRIPKPSTPPGSSCPPGNILGGPSVFIFP :::::::::::::::::::::::::::::: gi|558 VTVPSSTWPSQTVICNVAHPASKTELIKRIEPRIPKPSTPPGSSCPPGNILGGPSVFIFP 70 80 90 100 110 120 40 50 60 70 80 90 mFLJ00 PKPKDALMISLTPKVTCVVVDVSEDDPDVHVSWFVDNKEVHTAWTQPREAQYNSTFRVVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|558 PKPKDALMISLTPKVTCVVVDVSEDDPDVHVSWFVDNKEVHTAWTQPREAQYNSTFRVVS 130 140 150 160 170 180 100 110 120 130 140 150 mFLJ00 ALPIQHQDWMRGKEFKCKVNNKALPAPIERTISKPKGRAQTPQVYTIPPPREQMSKKKVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|558 ALPIQHQDWMRGKEFKCKVNNKALPAPIERTISKPKGRAQTPQVYTIPPPREQMSKKKVS 190 200 210 220 230 240 160 170 180 190 200 210 mFLJ00 LTCLVTNFFSEAISVEWERNGELEQDYKNTPPILDSDGTYFLYSKLTVDTDSWLQGEIFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|558 LTCLVTNFFSEAISVEWERNGELEQDYKNTPPILDSDGTYFLYSKLTVDTDSWLQGEIFT 250 260 270 280 290 300 220 230 240 250 260 270 mFLJ00 CSVVHEALHNHHTQKNLSRSPELELNETCAEAQDGELDGLWTTITIFISLFLLSVCYSAS ::::::::::::::::::::: gi|558 CSVVHEALHNHHTQKNLSRSPGK 310 320 >>gi|1799551|dbj|BAA11356.1| Ig gamma-chain, secrete-typ (329 aa) initn: 1605 init1: 1605 opt: 1605 Z-score: 1888.8 bits: 357.7 E(): 1.7e-96 Smith-Waterman score: 1605; 100.000% identity (100.000% similar) in 231 aa overlap (2-232:97-327) 10 20 30 mFLJ00 EEPRIPKPSTPPGSSCPPGNILGGPSVFIFP :::::::::::::::::::::::::::::: gi|179 VTVPSSTWPSQTVICNVAHPASKTELIKRIEPRIPKPSTPPGSSCPPGNILGGPSVFIFP 70 80 90 100 110 120 40 50 60 70 80 90 mFLJ00 PKPKDALMISLTPKVTCVVVDVSEDDPDVHVSWFVDNKEVHTAWTQPREAQYNSTFRVVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|179 PKPKDALMISLTPKVTCVVVDVSEDDPDVHVSWFVDNKEVHTAWTQPREAQYNSTFRVVS 130 140 150 160 170 180 100 110 120 130 140 150 mFLJ00 ALPIQHQDWMRGKEFKCKVNNKALPAPIERTISKPKGRAQTPQVYTIPPPREQMSKKKVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|179 ALPIQHQDWMRGKEFKCKVNNKALPAPIERTISKPKGRAQTPQVYTIPPPREQMSKKKVS 190 200 210 220 230 240 160 170 180 190 200 210 mFLJ00 LTCLVTNFFSEAISVEWERNGELEQDYKNTPPILDSDGTYFLYSKLTVDTDSWLQGEIFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|179 LTCLVTNFFSEAISVEWERNGELEQDYKNTPPILDSDGTYFLYSKLTVDTDSWLQGEIFT 250 260 270 280 290 300 220 230 240 250 260 270 mFLJ00 CSVVHEALHNHHTQKNLSRSPELELNETCAEAQDGELDGLWTTITIFISLFLLSVCYSAS ::::::::::::::::::::: gi|179 CSVVHEALHNHHTQKNLSRSPGK 310 320 >>gi|50346340|gb|AAT74921.1| anti-CMV coat protein monoc (461 aa) initn: 1605 init1: 1605 opt: 1605 Z-score: 1886.7 bits: 357.8 E(): 2.2e-96 Smith-Waterman score: 1605; 100.000% identity (100.000% similar) in 231 aa overlap (2-232:229-459) 10 20 30 mFLJ00 EEPRIPKPSTPPGSSCPPGNILGGPSVFIFP :::::::::::::::::::::::::::::: gi|503 VTVPSSTWPSQTVICNVAHPASKTELIKRIEPRIPKPSTPPGSSCPPGNILGGPSVFIFP 200 210 220 230 240 250 40 50 60 70 80 90 mFLJ00 PKPKDALMISLTPKVTCVVVDVSEDDPDVHVSWFVDNKEVHTAWTQPREAQYNSTFRVVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|503 PKPKDALMISLTPKVTCVVVDVSEDDPDVHVSWFVDNKEVHTAWTQPREAQYNSTFRVVS 260 270 280 290 300 310 100 110 120 130 140 150 mFLJ00 ALPIQHQDWMRGKEFKCKVNNKALPAPIERTISKPKGRAQTPQVYTIPPPREQMSKKKVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|503 ALPIQHQDWMRGKEFKCKVNNKALPAPIERTISKPKGRAQTPQVYTIPPPREQMSKKKVS 320 330 340 350 360 370 160 170 180 190 200 210 mFLJ00 LTCLVTNFFSEAISVEWERNGELEQDYKNTPPILDSDGTYFLYSKLTVDTDSWLQGEIFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|503 LTCLVTNFFSEAISVEWERNGELEQDYKNTPPILDSDGTYFLYSKLTVDTDSWLQGEIFT 380 390 400 410 420 430 220 230 240 250 260 270 mFLJ00 CSVVHEALHNHHTQKNLSRSPELELNETCAEAQDGELDGLWTTITIFISLFLLSVCYSAS ::::::::::::::::::::: gi|503 CSVVHEALHNHHTQKNLSRSPGK 440 450 460 >>gi|1794157|dbj|BAA04205.1| immunoglobulin heavy chain (461 aa) initn: 1605 init1: 1605 opt: 1605 Z-score: 1886.7 bits: 357.8 E(): 2.2e-96 Smith-Waterman score: 1605; 100.000% identity (100.000% similar) in 231 aa overlap (2-232:229-459) 10 20 30 mFLJ00 EEPRIPKPSTPPGSSCPPGNILGGPSVFIFP :::::::::::::::::::::::::::::: gi|179 VTVPSSTWPSQTVICNVAHPASKTELIKRIEPRIPKPSTPPGSSCPPGNILGGPSVFIFP 200 210 220 230 240 250 40 50 60 70 80 90 mFLJ00 PKPKDALMISLTPKVTCVVVDVSEDDPDVHVSWFVDNKEVHTAWTQPREAQYNSTFRVVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|179 PKPKDALMISLTPKVTCVVVDVSEDDPDVHVSWFVDNKEVHTAWTQPREAQYNSTFRVVS 260 270 280 290 300 310 100 110 120 130 140 150 mFLJ00 ALPIQHQDWMRGKEFKCKVNNKALPAPIERTISKPKGRAQTPQVYTIPPPREQMSKKKVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|179 ALPIQHQDWMRGKEFKCKVNNKALPAPIERTISKPKGRAQTPQVYTIPPPREQMSKKKVS 320 330 340 350 360 370 160 170 180 190 200 210 mFLJ00 LTCLVTNFFSEAISVEWERNGELEQDYKNTPPILDSDGTYFLYSKLTVDTDSWLQGEIFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|179 LTCLVTNFFSEAISVEWERNGELEQDYKNTPPILDSDGTYFLYSKLTVDTDSWLQGEIFT 380 390 400 410 420 430 220 230 240 250 260 270 mFLJ00 CSVVHEALHNHHTQKNLSRSPELELNETCAEAQDGELDGLWTTITIFISLFLLSVCYSAS ::::::::::::::::::::: gi|179 CSVVHEALHNHHTQKNLSRSPGK 440 450 460 >>gi|1304160|dbj|BAA03476.1| immunoglobulin gamma-3 heav (470 aa) initn: 1605 init1: 1605 opt: 1605 Z-score: 1886.6 bits: 357.8 E(): 2.2e-96 Smith-Waterman score: 1605; 100.000% identity (100.000% similar) in 231 aa overlap (2-232:238-468) 10 20 30 mFLJ00 EEPRIPKPSTPPGSSCPPGNILGGPSVFIFP :::::::::::::::::::::::::::::: gi|130 VTVPSSTWPSQTVICNVAHPASKTELIKRIEPRIPKPSTPPGSSCPPGNILGGPSVFIFP 210 220 230 240 250 260 40 50 60 70 80 90 mFLJ00 PKPKDALMISLTPKVTCVVVDVSEDDPDVHVSWFVDNKEVHTAWTQPREAQYNSTFRVVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|130 PKPKDALMISLTPKVTCVVVDVSEDDPDVHVSWFVDNKEVHTAWTQPREAQYNSTFRVVS 270 280 290 300 310 320 100 110 120 130 140 150 mFLJ00 ALPIQHQDWMRGKEFKCKVNNKALPAPIERTISKPKGRAQTPQVYTIPPPREQMSKKKVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|130 ALPIQHQDWMRGKEFKCKVNNKALPAPIERTISKPKGRAQTPQVYTIPPPREQMSKKKVS 330 340 350 360 370 380 160 170 180 190 200 210 mFLJ00 LTCLVTNFFSEAISVEWERNGELEQDYKNTPPILDSDGTYFLYSKLTVDTDSWLQGEIFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|130 LTCLVTNFFSEAISVEWERNGELEQDYKNTPPILDSDGTYFLYSKLTVDTDSWLQGEIFT 390 400 410 420 430 440 220 230 240 250 260 270 mFLJ00 CSVVHEALHNHHTQKNLSRSPELELNETCAEAQDGELDGLWTTITIFISLFLLSVCYSAS ::::::::::::::::::::: gi|130 CSVVHEALHNHHTQKNLSRSPGK 450 460 470 >>gi|33417043|gb|AAH55910.1| Expressed sequence AI324046 (470 aa) initn: 1605 init1: 1605 opt: 1605 Z-score: 1886.6 bits: 357.8 E(): 2.2e-96 Smith-Waterman score: 1605; 100.000% identity (100.000% similar) in 231 aa overlap (2-232:238-468) 10 20 30 mFLJ00 EEPRIPKPSTPPGSSCPPGNILGGPSVFIFP :::::::::::::::::::::::::::::: gi|334 VTVPSSTWPSQTVICNVAHPASKTELIKRIEPRIPKPSTPPGSSCPPGNILGGPSVFIFP 210 220 230 240 250 260 40 50 60 70 80 90 mFLJ00 PKPKDALMISLTPKVTCVVVDVSEDDPDVHVSWFVDNKEVHTAWTQPREAQYNSTFRVVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|334 PKPKDALMISLTPKVTCVVVDVSEDDPDVHVSWFVDNKEVHTAWTQPREAQYNSTFRVVS 270 280 290 300 310 320 100 110 120 130 140 150 mFLJ00 ALPIQHQDWMRGKEFKCKVNNKALPAPIERTISKPKGRAQTPQVYTIPPPREQMSKKKVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|334 ALPIQHQDWMRGKEFKCKVNNKALPAPIERTISKPKGRAQTPQVYTIPPPREQMSKKKVS 330 340 350 360 370 380 160 170 180 190 200 210 mFLJ00 LTCLVTNFFSEAISVEWERNGELEQDYKNTPPILDSDGTYFLYSKLTVDTDSWLQGEIFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|334 LTCLVTNFFSEAISVEWERNGELEQDYKNTPPILDSDGTYFLYSKLTVDTDSWLQGEIFT 390 400 410 420 430 440 220 230 240 250 260 270 mFLJ00 CSVVHEALHNHHTQKNLSRSPELELNETCAEAQDGELDGLWTTITIFISLFLLSVCYSAS ::::::::::::::::::::: gi|334 CSVVHEALHNHHTQKNLSRSPGK 450 460 470 >>gi|149044000|gb|EDL97382.1| rCG27696 [Rattus norvegicu (265 aa) initn: 1545 init1: 1545 opt: 1545 Z-score: 1819.7 bits: 344.6 E(): 1.2e-92 Smith-Waterman score: 1545; 84.906% identity (94.717% similar) in 265 aa overlap (39-303:1-265) 10 20 30 40 50 60 mFLJ00 STPPGSSCPPGNILGGPSVFIFPPKPKDALMISLTPKVTCVVVDVSEDDPDVHVSWFVDN ::.::::::::::::::..:::. :::::: gi|149 MITLTPKVTCVVVDVSEEEPDVQFSWFVDN 10 20 30 70 80 90 100 110 120 mFLJ00 KEVHTAWTQPREAQYNSTFRVVSALPIQHQDWMRGKEFKCKVNNKALPAPIERTISKPKG .: :: :::.: : :.::::::.: ::::::: ::::::::::: ::.:::.:::::.: gi|149 VRVFTAQTQPHEEQLNGTFRVVSTLHIQHQDWMSGKEFKCKVNNKDLPSPIEKTISKPRG 40 50 60 70 80 90 130 140 150 160 170 180 mFLJ00 RAQTPQVYTIPPPREQMSKKKVSLTCLVTNFFSEAISVEWERNGELEQDYKNTPPILDSD .:.::::::::::::::::.::::::.::.:. .:::::::::::::::::: :.:::: gi|149 KARTPQVYTIPPPREQMSKNKVSLTCMVTSFYPASISVEWERNGELEQDYKNTLPVLDSD 100 110 120 130 140 150 190 200 210 220 230 240 mFLJ00 GTYFLYSKLTVDTDSWLQGEIFTCSVVHEALHNHHTQKNLSRSPELELNETCAEAQDGEL .:::::::.::::::..:.:.:::::::::::::::::::::::::::::::::::::: gi|149 ESYFLYSKLSVDTDSWMRGDIYTCSVVHEALHNHHTQKNLSRSPELELNETCAEAQDGEL 160 170 180 190 200 210 250 260 270 280 290 300 mFLJ00 DGLWTTITIFISLFLLSVCYSASVTLFKVKWIFSSVVQVKQTAIPDYRNMIGQGA :::::::::::::::::::::::::::::::::::::::::: .::::::::::: gi|149 DGLWTTITIFISLFLLSVCYSASVTLFKVKWIFSSVVQVKQTMVPDYRNMIGQGA 220 230 240 250 260 >>gi|148686605|gb|EDL18552.1| mCG147639, isoform CRA_b [ (398 aa) initn: 1541 init1: 1541 opt: 1541 Z-score: 1812.5 bits: 343.8 E(): 3e-92 Smith-Waterman score: 1541; 72.848% identity (88.411% similar) in 302 aa overlap (2-303:97-398) 10 20 30 mFLJ00 EEPRIPKPSTPPGSSCPPGNILGGPSVFIFP ::: : . : .:: :.:::::::::: gi|148 VTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRGPTIKPCPPCKCPAPNLLGGPSVFIFP 70 80 90 100 110 120 40 50 60 70 80 90 mFLJ00 PKPKDALMISLTPKVTCVVVDVSEDDPDVHVSWFVDNKEVHTAWTQPREAQYNSTFRVVS :: ::.:::::.: :::::::::::::::..::::.: ::::: :: .. .::::.:::: gi|148 PKIKDVLMISLSPMVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVS 130 140 150 160 170 180 100 110 120 130 140 150 mFLJ00 ALPIQHQDWMRGKEFKCKVNNKALPAPIERTISKPKGRAQTPQVYTIPPPREQMSKKKVS :::::::::: ::::::::::: :::::::::::::: ...::::..:::.:.:.::.:. gi|148 ALPIQHQDWMSGKEFKCKVNNKDLPAPIERTISKPKGSVRAPQVYVLPPPEEEMTKKQVT 190 200 210 220 230 240 160 170 180 190 200 210 mFLJ00 LTCLVTNFFSEAISVEWERNGELEQDYKNTPPILDSDGTYFLYSKLTVDTDSWLQGEIFT :::.::.:. : : ::: ::. : .:::: :.:::::.::.:::: :. .:.. . .. gi|148 LTCMVTDFMPEDIYVEWTNNGKTELNYKNTEPVLDSDGSYFMYSKLRVEKKNWVERNSYS 250 260 270 280 290 300 220 230 240 250 260 270 mFLJ00 CSVVHEALHNHHTQKNLSRSPELELNETCAEAQDGELDGLWTTITIFISLFLLSVCYSAS ::::::.:::::: :..::.: :.:...:::::::::::::::::::::::::::::::: gi|148 CSVVHEGLHNHHTTKSFSRTPGLDLDDVCAEAQDGELDGLWTTITIFISLFLLSVCYSAS 310 320 330 340 350 360 280 290 300 mFLJ00 VTLFKVKWIFSSVVQVKQTAIPDYRNMIGQGA ::::::::::::::..::: ::::::::::: gi|148 VTLFKVKWIFSSVVELKQTISPDYRNMIGQGA 370 380 390 303 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Fri Mar 13 09:11:59 2009 done: Fri Mar 13 09:17:33 2009 Total Scan time: 777.010 Total Display time: 0.050 Function used was FASTA [version 34.26.5 April 26, 2007]