Comparison of KIAA cDNA sequences between mouse and human (FLJ00385)
<<Original sequence data>>
mouse mFLJ00385 (msh01286) length: 2989 bp, CDS: 862 - 1773
human (sj03289) length: 4240 bp, CDS: 1409 - 2938
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 244 - 1949 496 370 42.7
CDS: 1950 - 2948 702 212 23.2
3'UTR: 2949 - 4314 628 558 47.0
amino acid
CDS: 1950 - 2948 214 119 35.7
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
msh01286 1 .................................................. 1
sj03289 1 GCTCAGAGCACCAGGGCAGAGCAGCCACAAATGACAGGTGAGCAGGGACG 50
51 ----+----*----+----*----+----*----+----*----+----* 100
msh01286 1 .................................................. 1
sj03289 51 GTGGGAGGCAGGAGCTCCTAGACTTTGGCAGGAGCTGGGTAGTTGCCGGC 100
101 ----+----*----+----*----+----*----+----*----+----* 150
msh01286 1 .................................................. 1
sj03289 101 AGCAGACAGTTGAGAGCTGGTGAAAGTGCAGTGCAGCCTCCTGGTGCCGG 150
151 ----+----*----+----*----+----*----+----*----+----* 200
msh01286 1 .................................................. 1
sj03289 151 GAAGGGAGTGTGAGTCCATCCCACTGAGCAGTTGGCAAGGGCGAGCTGGG 200
201 ----+----*----+----*----+----*----+----*----+----* 250
msh01286 1 ...........................................GTGGGGT 7
| |||
sj03289 201 ATGGAGAAGGGAAGGCAGGCAGGGAACGTGTGCTTGAGACCAGGAGGGTC 250
251 ----+----*----+----*----+----*----+----*----+----* 300
msh01286 8 AGCATTCAGACCTTTGTGACAATTGGGTTGCAACTCCTAAGAGGAAAGAT 57
| | | | | |||| | || ||| |||| |
sj03289 251 CCAGGGCTGGTCCCAGCGGACCCTGGGCAGGAAGGCCTCTGAGGCTGGTG 300
301 ----+----*----+----*----+----*----+----*----+----* 350
msh01286 58 CCC.........AAAGCTAAGCTCCTGAGAGCTATGGACCGTCACAAAAA 98
||| ||| | ||| | |||| | ||||| ||| | ||
sj03289 301 CCCCAGAAGGAGCAAGATGGGCTGCCAGGAGCCA.GGACCATCAGCACAA 349
351 ----+----*----+----*----+----*----+----*----+----* 400
msh01286 99 ......................................AGAAGGCAGTCA 110
||| ||||| ||
sj03289 350 TGAAGCTGAGTGGAGGTGGTGCAGGGCAGTGTAGCAGCAGAGGGCAGCCA 399
401 ----+----*----+----*----+----*----+----*----+----* 450
msh01286 111 CTTTCATATTTCCCATGCATGAGTTGTGTC.................... 140
| | || || | | |||
sj03289 400 GAGGGGCCCATTCAGGGCCTGGGCAGAGTCAGCCAGAGCCTGTGGTGCAG 449
451 ----+----*----+----*----+----*----+----*----+----* 500
msh01286 141 ................................GGCCGGTAAAGGAGAGTA 158
||| | | | | |
sj03289 450 GTGAGGGGAAGGGGTGGTGAGCGGGACCCTGGGGCTGAGCAGAGGGGATG 499
501 ----+----*----+----*----+----*----+----*----+----* 550
msh01286 159 CAGTGGAAGAAGGCCTTGAGACCTGAGTCAGCAGTGGATATCAGCAAAAC 208
||| || ||| | | | || ||| || | ||| | |
sj03289 500 GCCTGGCTGAGGGCAGGGCGCTTAGCTTCCTCAGAGGTCAGGGGCACACC 549
551 ----+----*----+----*----+----*----+----*----+----* 600
msh01286 209 .................................................. 209
sj03289 550 CCACCTGCAGTGGGACTCCAGGGCCACTGGGCCAGCAGCAGAGAGAAATG 599
601 ----+----*----+----*----+----*----+----*----+----* 650
msh01286 209 ....................GGAACAACCAACAACCCATGGAAGAGTGGG 238
|| | || || ||| || | | |||
sj03289 600 GGGCCTCCCTGTGGCCTGGGGGTCCTGGCACCACGCCAGGGTGGGGAGGG 649
651 ----+----*----+----*----+----*----+----*----+----* 700
msh01286 239 AAGAAGTCGAAATACCAG.......ACTGTGGAGGGGGTCTCTCTGAT.. 279
||| | | | || ||||| ||||| | || | |
sj03289 650 CCCAAGGGCAGGTGCAAGGCTCCTACCTGTGCTGGGGGGCCCTGGGTTTG 699
701 ----+----*----+----*----+----*----+----*----+----* 750
msh01286 280 .................................................. 280
sj03289 700 AGCCCCAGCAGGACCTTGCCGGGGAAAGCTCTGGAGAGAGGAAGAGGTGG 749
751 ----+----*----+----*----+----*----+----*----+----* 800
msh01286 280 .........................GCACAGGTAAGGTGATGGCCTGAAG 304
| | || | ||||| || || |
sj03289 750 GCTGTGGCCGAAGAAGGCCAGGCCAGGGCTGGGAGGGTGACGGTGTGGTG 799
801 ----+----*----+----*----+----*----+----*----+----* 850
msh01286 305 A................................................. 305
|
sj03289 800 ACTGAGCCTCCAGAAGTAATGCAGGACACTGGGAGGCAGGGGGCATCCAG 849
851 ----+----*----+----*----+----*----+----*----+----* 900
msh01286 306 .................................................. 306
sj03289 850 GCACTCAGGGCCCTGACCTGGGCTGCTGCACACTGGGGCTAAGGGGAAAG 899
901 ----+----*----+----*----+----*----+----*----+----* 950
msh01286 306 .................................................. 306
sj03289 900 GAGGGGAGAGGCTGAGGAGGAGGCTCCCGGGGCGATATTCCAAGGCAGGG 949
951 ----+----*----+----*----+----*----+----*----+----* 1000
msh01286 306 .................................................. 306
sj03289 950 GGTTCCGGGGCCCTGGGGCTGAAGGGCGCCGACCCTATGCAGTGTCTGGC 999
1001 ----+----*----+----*----+----*----+----*----+----* 1050
msh01286 306 .......ATGTCAACCAGACAGGGTCCAGGGATGCCACAGGCTGGAACAT 348
|| | ||| | || || ||| | || ||| | ||
sj03289 1000 CCCTCTGCTGCACAGAAGAAAAGGGCCTTGGAGGGCAGAGGGCAGGCTAT 1049
1051 ----+----*----+----*----+----*----+----*----+----* 1100
msh01286 349 GGGCAAGTGGATCTGAACACACACAACAAAAACAACAACTACTGCTACCA 398
| || | | | || || || |||| |
sj03289 1050 GACCAGGGCCCTGGG......CAAGTCAGGCCCACTCACTAGCGGAGGGC 1093
1101 ----+----*----+----*----+----*----+----*----+----* 1150
msh01286 399 CCACCACCAGAGTCAGCCTCAAGGAGATGATGGGATATATCAGGATACCT 448
| | | | ||| ||| || | | |||| ||||| |||
sj03289 1094 CACGCTGGGGCGGCAGGGTCAGGGGCTTCAGGGGA...CTCAGGGGACCC 1140
1151 ----+----*----+----*----+----*----+----*----+----* 1200
msh01286 449 AAGATAAG.......................................... 456
| || |||
sj03289 1141 ACGAGAAGCCATCTGAGAACAGTGTCCACTGGTCAAGCCAGGCACCCATA 1190
1201 ----+----*----+----*----+----*----+----*----+----* 1250
msh01286 457 .................................................. 457
sj03289 1191 AAAGGCTGGAGTGGGGCCAATGGGCATGAGCCGTCCCTGAGGTGGCACCG 1240
1251 ----+----*----+----*----+----*----+----*----+----* 1300
msh01286 457 ........................ATGAACTTGGTCTGTCTGGAAGCTGG 482
| | ||| |||| || | |
sj03289 1241 ATGGCCAGAGCTGAGGCCAAGCTAGAGGCCCTGGACTGTGCTGACTCCCG 1290
1301 ----+----*----+----*----+----*----+----*----+----* 1350
msh01286 483 CAGGACCAAATTCGCTGA...GTCAGCAGAGAAGAGGTGGCCAGAGGAGC 529
||| | |||||| | | || ||| | | ||
sj03289 1291 GCAGACACAGAGCGCTGACCTGGCTGCCGAGCCCCGCCTCCTAGGCTGCA 1340
1351 ----+----*----+----*----+----*----+----*----+----* 1400
msh01286 530 AAGATCTCTGCAGCAGAAATCTGCAGGACTAAC................. 562
| | |||||| || | |||| | | |
sj03289 1341 GGGGTGCCTGCAGAAGGGCACCACAGGGCCACCGGTCCTGCAAGCTTTCT 1390
1401 ----+----*----+----*----+----*----+----*----+----* 1450
msh01286 563 .................................................. 563
sj03289 1391 GGGGCGGGCCGGGCCTGACTTTGGCTTTGGGGCAGGGAGTGGGCTAAGGT 1440
L W L W G R E W A K V
1451 ----+----*----+----*----+----*----+----*----+----* 1500
msh01286 563 .................................................. 563
sj03289 1441 GACGCAGGTGGCGCCAGCCAGGCGCACACCCAATGCCCGTGAGCCCAGAC 1490
T Q V A P A R R T P N A R E P R H
1501 ----+----*----+----*----+----*----+----*----+----* 1550
msh01286 563 .................................................. 563
sj03289 1491 ACTGGACCCTGCCTGGACCCTCGTGGATAGACAAGAACCAAGGGGCCTCT 1540
W T L P G P S W I D K N Q G A S
1551 ----+----*----+----*----+----*----+----*----+----* 1600
msh01286 563 .................................................. 563
sj03289 1541 GCGCCCTGGGCCCAGCTCTGTCCCACACCGCAGTCACATGGCGCCATCTC 1590
A P W A Q L C P T P Q S H G A I S
1601 ----+----*----+----*----+----*----+----*----+----* 1650
K A T T T A P S V Y P L V P G C
msh01286 563 ....AAAGCTACAACAACAGCCCCATCTGTCTATCCCTTGGTCCCTGGCT 608
|||| | || | | |||||| |||| ||| ||| || |||
sj03289 1591 TCTTGCAGCTTCCACCAAGGGCCCATCGGTCTTCCCCCTGGCGCCCTGCT 1640
L A A S T K G P S V F P L A P C S
1651 ----+----*----+----*----+----*----+----*----+----* 1700
G D T S G S S V T L G C L V K G
msh01286 609 GCGGTGACACATCTGGATCCTCGGTGACACTGGGATGCCTTGTCAAAGGC 658
| | ||| ||||| | | | | | ||||| ||||| ||||| | |
sj03289 1641 CCAGGAGCACCTCTGGGGGCACAGCGGCCCTGGGCTGCCTGGTCAAGGAC 1690
R S T S G G T A A L G C L V K D
1701 ----+----*----+----*----+----*----+----*----+----* 1750
Y F P E P V T V K W N Y G A L S S
msh01286 659 TACTTCCCTGAGCCGGTAACTGTAAAATGGAACTATGGAGCCCTGTCCAG 708
|||||||| || ||||| || || ||||||| || |||||| ||||
sj03289 1691 TACTTCCCCGAACCGGTGACGGTGTCGTGGAACTCAGGCGCCCTGACCAG 1740
Y F P E P V T V S W N S G A L T S
1751 ----+----*----+----*----+----*----+----*----+----* 1800
G V R T V S S V L Q S G F Y S L
msh01286 709 CGGTGTGCGCACAGTCTCATCTGTACTGCAG...TCTGGGTTCTATTCCC 755
||| |||| ||| || | |||| || ||| || || |||| ||||
sj03289 1741 CGGCGTGCACACCTTCCCGGCTGTCCTACAGTCCTCAGGACTCTACTCCC 1790
G V H T F P A V L Q S S G L Y S L
1801 ----+----*----+----*----+----*----+----*----+----* 1850
S S L V T V P S S T W P S Q T V
msh01286 756 TCAGCAGCTTGGTGACTGTACCCTCCAGCACCTGGCCCAGCCAGACTGTC 805
|||||||| ||||||| || |||||||||| || | || |||||| |
sj03289 1791 TCAGCAGCGTGGTGACCGTGCCCTCCAGCAGCTTGGGCACCCAGACCTAC 1840
S S V V T V P S S S L G T Q T Y
1851 ----+----*----+----*----+----*----+----*----+----* 1900
I C N V A H P A S K T E L I K R -
msh01286 806 ATCTGCAACGTAGCCCACCCAGCCAGCAAGACTGAGTTGATCAAGAGAAT 855
| ||||||||| ||| ||||||| || || || ||||||| |
sj03289 1841 ACCTGCAACGTGAATCACAAGCCCAGCAACACCAAGGTGGACAAGAGAGT 1890
T C N V N H K P S N T K V D K R V
1901 ----+----*----+----*----+----*----+----*----+----* 1950
R * E
msh01286 856 ...........................................CGGTGAG 862
|||||
sj03289 1891 TGAGCTCAAAACCCCACTTGGTGACACAACTCACACATGCCCACGGTGCC 1940
E L K T P L G D T T H T C P R C P
1951 ----+----*----+----*----+----*----+----*----+----* 2000
E P R T Q A Q Y -
msh01286 863 AGGAGCCTAGA.......ATACCCAAGCCCAGTACC.............. 891
||||| | | | || | ||| || ||
sj03289 1941 CAGAGCCCAAATCTTGTGACACACCTCCCCCGTGCCCACGGTGCCCAGAG 1990
E P K S C D T P P P C P R C P E
2001 ----+----*----+----*----+----*----+----*----+----* 2050
msh01286 892 .................................................. 892
sj03289 1991 CCCAAATCTTGTGACACACCTCCCCCATGCCCACGGTGCCCAGAGCCCAA 2040
P K S C D T P P P C P R C P E P K
2051 ----+----*----+----*----+----*----+----*----+----* 2100
P P G S S C P P G N I L
msh01286 892 ................CCCCCAGGTTCTTCATGCCCACCTGGTAACATCT 925
|||||| | | |||||| | | | ||
sj03289 2041 ATCTTGTGACACACCTCCCCCATGCCCACGGTGCCCAGCACCTGAACTCC 2090
S C D T P P P C P R C P A P E L L
2101 ----+----*----+----*----+----*----+----*----+----* 2150
G G P S V F I F P P K P K D A L
msh01286 926 TGGGTGGACCATCCGTCTTCATCTTCCCCCCAAAGCCCAAGGATGCACTC 975
|||| ||||| || |||||| ||||||||||||| ||||||||| | ||
sj03289 2091 TGGGAGGACCGTCAGTCTTCCTCTTCCCCCCAAAACCCAAGGATACCCTT 2140
G G P S V F L F P P K P K D T L
2151 ----+----*----+----*----+----*----+----*----+----* 2200
M I S L T P K V T C V V V D V S E
msh01286 976 ATGATCTCCCTAACCCCCAAGGTTACGTGTGTGGTGGTGGATGTGAGCGA 1025
||||| |||| ||||| |||| ||||| ||||||||||| |||||| |
sj03289 2141 ATGATTTCCCGGACCCCTGAGGTCACGTGCGTGGTGGTGGACGTGAGCCA 2190
M I S R T P E V T C V V V D V S H
2201 ----+----*----+----*----+----*----+----*----+----* 2250
D D P D V H V S W F V D N K E V H
msh01286 1026 GGATGACCCAGATGTCCATGTCAGCTGGTTTGTGGACAACAAAGAAGTAC 1075
|| ||||| || ||||| ||| |||| |||||| | || || |
sj03289 2191 CGAAGACCCCGAGGTCCAGTTCAAGTGGTACGTGGACGGCGTGGAGGTGC 2240
E D P E V Q F K W Y V D G V E V H
2251 ----+----*----+----*----+----*----+----*----+----* 2300
T A W T Q P R E A Q Y N S T F R
msh01286 1076 ACACAGCCTGGACGCAGCCCCGTGAAGCTCAGTACAACAGTACCTTCCGA 1125
| | ||| ||| |||| || || | |||| |||||| || |||||
sj03289 2241 ATAATGCCAAGACAAAGCCGCGGGAGGAGCAGTTCAACAGCACGTTCCGT 2290
N A K T K P R E E Q F N S T F R
2301 ----+----*----+----*----+----*----+----*----+----* 2350
V V S A L P I Q H Q D W M R G K E
msh01286 1126 GTGGTCAGTGCCCTCCCCATCCAGCACCAGGACTGGATGAGGGGCAAGGA 1175
|||||||| | |||| || ||| ||||||||||||| ||| ||||||||
sj03289 2291 GTGGTCAGCGTCCTCACCGTCCTGCACCAGGACTGGCTGAACGGCAAGGA 2340
V V S V L T V L H Q D W L N G K E
2351 ----+----*----+----*----+----*----+----*----+----* 2400
F K C K V N N K A L P A P I E R T
msh01286 1176 GTTCAAATGCAAGGTCAACAACAAAGCCCTCCCAGCCCCCATCGAGAGAA 1225
|| ||| ||||||||| ||||||||||||||||||||||||||||| ||
sj03289 2341 GTACAAGTGCAAGGTCTCCAACAAAGCCCTCCCAGCCCCCATCGAGAAAA 2390
Y K C K V S N K A L P A P I E K T
2401 ----+----*----+----*----+----*----+----*----+----* 2450
I S K P K G R A Q T P Q V Y T I
msh01286 1226 CCATCTCAAAACCCAAAGGAAGAGCCCAGACACCTCAAGTATACACCATA 1275
||||||| ||| |||||||| ||| ||| || || |||||| |
sj03289 2391 CCATCTCCAAAACCAAAGGACAGCCCCGAGAACCACAGGTGTACACCCTG 2440
I S K T K G Q P R E P Q V Y T L
2451 ----+----*----+----*----+----*----+----*----+----* 2500
P P P R E Q M S K K K V S L T C L
msh01286 1276 CCCCCACCTCGTGAACAAATGTCCAAGAAGAAGGTTAGTCTGACCTGCCT 1325
|||||| | || || | ||| ||||||| |||| || |||||||||||
sj03289 2441 CCCCCATCCCGGGAGGAGATGACCAAGAACCAGGTCAGCCTGACCTGCCT 2490
P P S R E E M T K N Q V S L T C L
2501 ----+----*----+----*----+----*----+----*----+----* 2550
V T N F F S E A I S V E W E R N G
msh01286 1326 GGTCACCAACTTCTTCTCTGAAGCCATCAGTGTGGAGTGGGAAAGGAACG 1375
||||| ||||| | | | |||| ||||||||||| || | ||
sj03289 2491 GGTCAAAGGCTTCTACCCCAGCGACATCGCCGTGGAGTGGGAGAGCAGCG 2540
V K G F Y P S D I A V E W E S S G
2551 ----+----*----+----*----+----*----+----*----+----* 2600
E L E Q D Y K N T P P I L D S D
msh01286 1376 GAGAACTGGAGCAGGATTACAAGAACACTCCACCCATCCTGGACTCGGAT 1425
| | | |||| | | ||||| | ||| || ||||| |||||||| ||
sj03289 2541 GGCAGCCGGAGAACAACTACAACACCACGCCTCCCATGCTGGACTCCGAC 2590
Q P E N N Y N T T P P M L D S D
2601 ----+----*----+----*----+----*----+----*----+----* 2650
G T Y F L Y S K L T V D T D S W L
msh01286 1426 GGGACCTACTTCCTCTACAGCAAGCTCACTGTGGATACAGACAGTTGGTT 1475
|| ||| ||||||||||||||||||||| ||||| | ||| |||
sj03289 2591 GGCTCCTTCTTCCTCTACAGCAAGCTCACCGTGGACAAGAGCAGGTGGCA 2640
G S F F L Y S K L T V D K S R W Q
2651 ----+----*----+----*----+----*----+----*----+----* 2700
Q G E I F T C S V V H E A L H N H
msh01286 1476 GCAAGGAGAAATTTTTACCTGCTCCGTGGTGCATGAGGCTCTCCATAACC 1525
||| || | || || | ||||||||| ||||||||||||| || ||||
sj03289 2641 GCAGGGGAACATCTTCTCATGCTCCGTGATGCATGAGGCTCTGCACAACC 2690
Q G N I F S C S V M H E A L H N R
2701 ----+----*----+----*----+----*----+----*----+----* 2750
H T Q K N L S R S P E L E L N E
msh01286 1526 ACCACACACAGAAGAACCTGTCTCGCTCCCCTGAGCTGGAACTGAATGAG 1575
| ||| ||||||| ||| || | || || |||||| ||||| | |||
sj03289 2691 GCTTCACGCAGAAGAGCCTCTCCCTGTCTCCGGAGCTGCAACTGGAGGAG 2740
F T Q K S L S L S P E L Q L E E
2751 ----+----*----+----*----+----*----+----*----+----* 2800
T C A E A Q D G E L D G L W T T I
msh01286 1576 ACCTGTGCTGAGGCCCAGGATGGGGAGCTGGACGGGCTCTGGACGACCAT 1625
| |||||| ||||| ||||| ||||||||||||||||| |||||||||||
sj03289 2741 AGCTGTGCGGAGGCGCAGGACGGGGAGCTGGACGGGCTGTGGACGACCAT 2790
S C A E A Q D G E L D G L W T T I
2801 ----+----*----+----*----+----*----+----*----+----* 2850
T I F I S L F L L S V C Y S A S V
msh01286 1626 CACCATCTTCATCAGCCTCTTCCTGCTCAGCGTGTGCTACAGCGCCTCTG 1675
|||||||||||||| ||||||||| | |||||||||||||| ||| | |
sj03289 2791 CACCATCTTCATCACACTCTTCCTGTTAAGCGTGTGCTACAGTGCCACCG 2840
T I F I T L F L L S V C Y S A T V
2851 ----+----*----+----*----+----*----+----*----+----* 2900
T L F K V K W I F S S V V Q V K
msh01286 1676 TCACCCTCTTCAAGGTGAAGTGGATCTTCTCCTCAGTGGTGCAGGTGAAG 1725
||||| |||||||||||||||||||||||||||| |||||| | |||||
sj03289 2841 TCACCTTCTTCAAGGTGAAGTGGATCTTCTCCTCGGTGGTGGACCTGAAG 2890
T F F K V K W I F S S V V D L K
2901 ----+----*----+----*----+----*----+----*----+----* 2950
Q T A I P D Y R N M I G Q G A *
msh01286 1726 CAGACGGCCATCCCTGACTACAGGAACATGATTGGACAAGGTGCCTAGCC 1775
||||| |||||| ||||| |||||||||||||| || || ||||||
sj03289 2891 CAGACCATCATCCCCGACTATAGGAACATGATTGGGCAGGGGGCCTAGGG 2940
Q T I I P D Y R N M I G Q G A *
2951 ----+----*----+----*----+----*----+----*----+----* 3000
msh01286 1776 TGTCTCTTCAGAAGGTG.CCAGAGCTTGCTAGCCCTCTAGGACCAAGTCC 1824
| || |||| |||| || | || | | | | || |
sj03289 2941 CCACCCTCTGCGGGGTGTCCAGGGCCACCCAGATC.CCACACACGAGCCG 2989
3001 ----+----*----+----*----+----*----+----*----+----* 3050
msh01286 1825 ATGCTGCTGAGCTGCCAGACACACGGGTTACACTGCCTTCTCATCTCAGC 1874
| || | |||| ||| | || |||| | | | |||| |
sj03289 2990 TGGGCCATGCTCAGCCA.CCACCCAGGCCACACCTGCCCCCGACCTCA.C 3037
3051 ----+----*----+----*----+----*----+----*----+----* 3100
msh01286 1875 ATCCTTTGATCTTATGGCTCTGACTCTGCTACCCAGGTCCCTTCCACATT 1924
|| | | | |||||||| ||| | | || | |
sj03289 3038 CGCCCTCAACCCCATGGCTCTCTGTCTTTGCAGTCGCCCTCTGAGCCCTG 3087
3101 ----+----*----+----*----+----*----+----*----+----* 3150
msh01286 1925 TGGAGCAGCATGTGGAAAGCAGGCTTTGCCCCAGACCATAGCCAACAGGA 1974
|| | | | | ||| | |||||| |
sj03289 3088 ACACGCCCCCCTTCCA...........GACCCTGTGCATAGC.....AGG 3121
3151 ----+----*----+----*----+----*----+----*----+----* 3200
msh01286 1975 CCCAAGCACCACTACCACAGCCAAAACAGTGGATAGGGTCAAAACTGCTG 2024
| | | || || | || || | | | | |
sj03289 3122 TCTACCCCAGACCTCCGCTGCTTGGTGCATGCAGGGAGCTGGGAACCAGG 3171
3201 ----+----*----+----*----+----*----+----*----+----* 3250
msh01286 2025 TGTTTCTTCTACATGGTGTCTAGCCC......TCAGCCAGGCACTCTCCC 2068
||| | || || | |||| || | ||||| ||| | |
sj03289 3172 TGTCCCCTCAGCAGGATGTCCCTGCCCTCCAGACCGCCAGATGCTCACAC 3221
3251 ----+----*----+----*----+----*----+----*----+----* 3300
msh01286 2069 AAGA........TGGGCTGCATCACCTGCATCCATTTAGATGCAGATGAG 2110
|| | || | ||||| || ||| || |
sj03289 3222 AAAAGGAGGCAGTGACCAGCATCCGAGGCCCCCACCCAGGCAGGAGCTGG 3271
3301 ----+----*----+----*----+----*----+----*----+----* 3350
msh01286 2111 CCTTAGAGCCAGCCCTGTCTATACAGTCCTCTGAAAAACGTGCTTCTCTG 2160
|| | |||||| ||| ||| | | |||| |||
sj03289 3272 CCCTGGAGCCAACCCCGTCCACGCCAGCCTC................CTG 3305
3351 ----+----*----+----*----+----*----+----*----+----* 3400
msh01286 2161 AGAGAAGAGGAAGTTTCCATGTGTCTCTAAGGCTGAGAAGGCCTCAAAGG 2210
| || | ||||||| || | | || ||
sj03289 3306 AACACAGGCGTGGTTTCCAGATGCCCGCAGCCAGCCAGCCTCCATTCCGG 3355
3401 ----+----*----+----*----+----*----+----*----+----* 3450
msh01286 2211 GAACTCTTTGGGAAGGACTGCCAAAGGTGACTCTAATGGCCTTCACCCAA 2260
| |||| | ||| ||| || | | || || |||
sj03289 3356 GCACTC.CCGTGAACTCCTGACATGAGGAATGAGGTTGTTCTGATTTCAA 3404
3451 ----+----*----+----*----+----*----+----*----+----* 3500
msh01286 2261 CCAGTGCCCTGCCGTGTTTTTTCACTTCTTGGAATGTAAGATGGGGCTAC 2310
|| | | || | | | || || |||| | ||
sj03289 3405 GCAAAG...AACGCTGCTCTCTGGCTCCTGGGAA........CAGTCTCG 3443
3501 ----+----*----+----*----+----*----+----*----+----* 3550
msh01286 2311 TTGTGAAGACCTCTTTTCCTGCCATCCATGCAACA.TGATGAAATCTCAA 2359
|| | ||| | | || | || | ||| || || | ||||
sj03289 3444 GTGCCAGCACCAC..CCCTTGGCTGCCTGCCTACACTGCTGGATTCTCGG 3491
3551 ----+----*----+----*----+----*----+----*----+----* 3600
msh01286 2360 ATGCAA.GATCCCATCAGACACTGCTGACCCCACAGCTTG.......... 2398
|| || || ||| || || ||||| || |
sj03289 3492 GTGGAACTCGACCCGCAGGGACAGCCAGCCCCAGAGTCCGCACTGGGGAG 3541
3601 ----+----*----+----*----+----*----+----*----+----* 3650
msh01286 2399 ..........AAGACCAGGGCACTGTTACCT......CAGTGGATGACCT 2432
| | ||||| ||||| |||| || | | |
sj03289 3542 AGAAGGGGCCAGGCCCAGGACACTGCCACCTCCCACCCACTCCAGTCCAC 3591
3651 ----+----*----+----*----+----*----+----*----+----* 3700
msh01286 2433 AGAGAGACACTCAG...AGGGCCTGAGCTTCATAGCCTCTGTTGGGCCC. 2478
|||| ||||||| || ||||| || | ||| ||| || ||
sj03289 3592 CGAGA.TCACTCAGAGAAGAGCCTGGGCCATGTGGCCACTGCAGGAGCCC 3640
3701 ----+----*----+----*----+----*----+----*----+----* 3750
msh01286 2479 .....TAGCAGGTACAGGAGCCACTGAGCAAAGGCTGGGCA...ACCCAG 2520
| ||| |||| | || || ||||||||| |||||
sj03289 3641 CACAGTGCAAGGGTGAGGATAGCCCAAGGAAGGGCTGGGCATCTGCCCAG 3690
3751 ----+----*----+----*----+----*----+----*----+----* 3800
msh01286 2521 AAAAGCCCGTAGGAGAA.......GAGCAGACCCCGGTCAGTC....... 2556
| | ||| ||||| || ||| ||| | | | |
sj03289 3691 ACAGGCCTCCCAGAGAAGGCTGGTGACCAGGTCCCAGGCGGGCAAGACTC 3740
3801 ----+----*----+----*----+----*----+----*----+----* 3850
msh01286 2557 ....................CCAAAGGTGGTCCAGGAGCAACATGGGGAG 2586
|| ||| || ||||||||| | || |||
sj03289 3741 AGCCTTGGTGGGGCCTGAGGACAGAGGAGGCCCAGGAGCATCGGGGAGAG 3790
3851 ----+----*----+----*----+----*----+----*----+----* 3900
msh01286 2587 AGAGAGAAAGGATGCTTAAAAAGCCAGG........CAGAAATGGGCCT. 2627
|| | | | ||| | | ||||||| || | | ||
sj03289 3791 AG.GTGGAGGGACACCGGGAGAGCCAGGAGCGTGGACACAGCCAGAACTC 3839
3901 ----+----*----+----*----+----*----+----*----+----* 3950
msh01286 2628 TTCCTGCAGCCTGGCATCCAG.ACTGGGCCACTGACAGCAGAGAATACCA 2676
|| || ||||| ||||| | ||| ||| |||||| | | ||
sj03289 3840 ATCACAGAGGCTGGCGTCCAGCCCCGGGTCACGTGCAGCAGGAACAAGCA 3889
3951 ----+----*----+----*----+----*----+----*----+----* 4000
msh01286 2677 GTTAGAGT.AGATATCCAGAGAGAGAGCCCAGGCCTGGGGCACTGAGGCT 2725
| | | | |||| ||||| | || | | || |||| |
sj03289 3890 GCCACTCTGGGGGCACCAGGTGGAGAGGCAAGAC....GCCAAAGAGGGT 3935
4001 ----+----*----+----*----+----*----+----*----+----* 4050
msh01286 2726 GACTGACTGCTGGCATTGG...........................AGAG 2748
| | | | || || | ||||
sj03289 3936 GCCCGTGTTCTTGCGAAAGCGGGGCTGCTGGCCACGAGTGCTGGACAGAG 3985
4051 ----+----*----+----*----+----*----+----*----+----* 4100
msh01286 2749 GCACTGTGGCT...GTTTCTCCATTTCATATCAAGGCAAATGCCAGGCCA 2795
|| | ||| | | |||| | | | || || | ||
sj03289 3986 GCCCCCACGCTCTGCTGCCCCCATCACGCCGTTCCGTGACTGTCACG.CA 4034
4101 ----+----*----+----*----+----*----+----*----+----* 4150
msh01286 2796 GAGTCCCCAGAAAAGACAAAGGAGAAATCCAGGAAGA............. 2832
|| ||| |||| | | |||| || || ||
sj03289 4035 GAATCCGCAGACAGG...AAGGGAGGCTCGAGCGGGACTGCGGCCAGCGC 4081
4151 ----+----*----+----*----+----*----+----*----+----* 4200
msh01286 2833 .....AAAGTTGGGTGCCCGGCTCTTAGGGGACTCTAAGAGATGTTCACT 2877
|| || | || ||| | || || | | |
sj03289 4082 CTGCCTCAGCTGTCAGGGAGGACTCCCGGGCTCACTCGAAGGAGGTGCCA 4131
4201 ----+----*----+----*----+----*----+----*----+----* 4250
msh01286 2878 GACTTGAAGCTTAGCTTTGCCAGCTTTTTC.TTTAAATTTTCTGGAGCCC 2926
|| ||||| | | ||| ||| |||||||||||| ||| |
sj03289 4132 CCATTTCAGCTTTGGTAGCTTTTCTTCTTCTTTTAAATTTTCTAAAGCTC 4181
4251 ----+----*----+----*----+----*----+----*----+----* 4300
msh01286 2927 AGCTA.TGTCTCTAATGTCCCTCTTCATCTTTTTTAATAATAATAAAACA 2975
| | ||||| | |||| |||||| | || | ||||||| |
sj03289 4182 ATTAATTGTCTTTGATGT........TTCTTTTGTGATGACAATAAAATA 4223
4301 ----+----*----+-- 4317
msh01286 2976 TCCTTCAACATTGT... 2989
||||| | | |
sj03289 4224 TCCTTTTTAAGTCTTGT 4240