Comparison of KIAA cDNA sequences between mouse and human (KIAA0003)
<<Original sequence data>>
mouse mKIAA0003 (msh01094) length: 4073 bp, CDS: 265 - 1830
human KIAA0003 (hk04939) length: 4211 bp, CDS: 274 - 1848
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 16 - 284 232 31 11.8
CDS: 285 - 1853 1435 132 8.4
3'UTR: 1854 - 4256 1511 702 31.7
amino acid
CDS: 285 - 1853 503 20 3.8
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
msh01094 1 ...............GAGGAAAGGGGCTAGAATATGTACTCGCAGCTGAC 35
|||||||||| ||||||||||||| ||||||||||
hk04939 1 GCAGCAGATAGGGTAGAGGAAAGGGTCTAGAATATGTACACGCAGCTGAC 50
51 ----+----*----+----*----+----*----+----*----+----* 100
msh01094 36 GCGGGCAGGCTCCACGCTGAACGGTTACACAGAGAGGAAACAATAAATCT 85
| ||||||||||| |||||||||| ||||||||||||||||||||||||
hk04939 51 TCAGGCAGGCTCCATGCTGAACGGTCACACAGAGAGGAAACAATAAATCT 100
101 ----+----*----+----*----+----*----+----*----+----* 150
msh01094 86 AAGCTACTATTGCAATAAATATCTCAAGTTTTAACGAAGGAAACTATCAT 135
|||||||| ||||||||||||||||||||||||||||| ||| |||||
hk04939 101 CAGCTACTA.TGCAATAAATATCTCAAGTTTTAACGAAGAAAAACATCAT 149
151 ----+----*----+----*----+----*----+----*----+----* 200
msh01094 136 TACAGTTAAAATTTTTTAAAGTAACGCTTTTTTAGAATAAAGCTAACAAA 185
| |||| ||| | ||| | |||||||| ||||||||||||
hk04939 150 TGCAGTGAAA....TAAAAAATTTTAAAATTTTAGAACAAAGCTAACAAA 195
201 ----+----*----+----*----+----*----+----*----+----* 250
msh01094 186 TGGCTAGTTTTCTGTGGATCTTCTTCAAACGCTTTCTTTAACGGGGAAAG 235
||||||||||||| || ||||||||||||||||||||| | ||||||||
hk04939 196 TGGCTAGTTTTCTATGATTCTTCTTCAAACGCTTTCTTTGAGGGGGAAAG 245
251 ----+----*----+----*----+----*----+----*----+----* 300
N K E L - L K V
msh01094 236 AGT....CAAACAAGCAGTTTTACCTGAAATAAAGAACTAG.TTTAAAGG 280
||| |||||||||||||||||||||||||||||||||| |||| |||
hk04939 246 AGTCAAACAAACAAGCAGTTTTACCTGAAATAAAGAACTAGTTTTAGAGG 295
N K E L V L E V
301 ----+----*----+----*----+----*----+----*----+----* 350
R R E E Q A L Q E A R K A S A G
msh01094 281 TCAGAAGAGAAGAGCAAGCTTTGCAGGAGGCACGGAAGGCAAGCGCTGGC 330
|||||||| | ||||||| ||||| ||||||||||||| | ||||||
hk04939 296 TCAGAAGAAAGGAGCAAGTTTTGCGAGAGGCACGGAAGGAGTGTGCTGGC 345
R R K E Q V L R E A R K E C A G
351 ----+----*----+----*----+----*----+----*----+----* 400
S T M T V F L S F A F F A A I L T
msh01094 331 AGTACAATGACAGTTTTCCTTTCCTTTGCATTCTTCGCTGCCATTCTGAC 380
||||||||||||||||||||||||||||| ||| ||||||||||||||||
hk04939 346 AGTACAATGACAGTTTTCCTTTCCTTTGCTTTCCTCGCTGCCATTCTGAC 395
S T M T V F L S F A F L A A I L T
401 ----+----*----+----*----+----*----+----*----+----* 450
H I G C S N Q R R N P E N G G R R
msh01094 381 TCACATAGGGTGCAGCAACCAGCGCCGAAATCCAGAAAACGGAGGGAGAA 430
|||||||||||||||||| |||||||||| |||||||||| | |||||||
hk04939 396 TCACATAGGGTGCAGCAATCAGCGCCGAAGTCCAGAAAACAGTGGGAGAA 445
H I G C S N Q R R S P E N S G R R
451 ----+----*----+----*----+----*----+----*----+----* 500
Y N R I Q H G Q C A Y T F I L P
msh01094 431 GATATAACCGGATTCAACATGGGCAATGTGCCTACACTTTCATTCTTCCA 480
||||||||||||||||||||||||||||||||||||||||||||||||||
hk04939 446 GATATAACCGGATTCAACATGGGCAATGTGCCTACACTTTCATTCTTCCA 495
Y N R I Q H G Q C A Y T F I L P
501 ----+----*----+----*----+----*----+----*----+----* 550
E H D G N C R E S A T E Q Y N T N
msh01094 481 GAACACGACGGGAACTGCCGTGAGAGTGCGACAGAGCAGTACAACACCAA 530
|||||||| || ||||| ||||||||| ||||||| ||||||||||| ||
hk04939 496 GAACACGATGGCAACTGTCGTGAGAGTACGACAGACCAGTACAACACAAA 545
E H D G N C R E S T T D Q Y N T N
551 ----+----*----+----*----+----*----+----*----+----* 600
A L Q R D A P H V E P D F S S Q K
msh01094 531 CGCTCTGCAAAGGGATGCTCCACACGTGGAGCCGGATTTCTCTTCCCAGA 580
||||||||| || ||||||||||||||||| |||||||||||||||||||
hk04939 546 CGCTCTGCAGAGAGATGCTCCACACGTGGAACCGGATTTCTCTTCCCAGA 595
A L Q R D A P H V E P D F S S Q K
601 ----+----*----+----*----+----*----+----*----+----* 650
L Q H L E H V M E N Y T Q W L Q
msh01094 581 AACTTCAGCATCTGGAGCATGTGATGGAAAATTATACTCAGTGGCTGCAA 630
||||||| |||||||| |||||||||||||||||||||||||||||||||
hk04939 596 AACTTCAACATCTGGAACATGTGATGGAAAATTATACTCAGTGGCTGCAA 645
L Q H L E H V M E N Y T Q W L Q
651 ----+----*----+----*----+----*----+----*----+----* 700
K L E N Y I V E N M K S E M A Q I
msh01094 631 AAACTTGAGAATTACATTGTGGAAAATATGAAGTCGGAGATGGCCCAGAT 680
|||||||||||||||||||||||||| |||||||||||||||||||||||
hk04939 646 AAACTTGAGAATTACATTGTGGAAAACATGAAGTCGGAGATGGCCCAGAT 695
K L E N Y I V E N M K S E M A Q I
701 ----+----*----+----*----+----*----+----*----+----* 750
Q Q N A V Q N H T A T M L E I G T
msh01094 681 ACAACAGAATGCTGTTCAAAACCACACGGCCACCATGCTTGAGATAGGAA 730
||| |||||||| ||||| ||||||||||| |||||||| ||||||||||
hk04939 696 ACAGCAGAATGCAGTTCAGAACCACACGGCTACCATGCTGGAGATAGGAA 745
Q Q N A V Q N H T A T M L E I G T
751 ----+----*----+----*----+----*----+----*----+----* 800
S L L S Q T A E Q T R K L T D V
msh01094 731 CCAGTCTCTTATCTCAGACTGCAGAGCAGACCCGAAAGCTGACAGATGTT 780
|||| ||| | ||||||||||||||||||||| |||||||||||||||||
hk04939 746 CCAGCCTCCTCTCTCAGACTGCAGAGCAGACCAGAAAGCTGACAGATGTT 795
S L L S Q T A E Q T R K L T D V
801 ----+----*----+----*----+----*----+----*----+----* 850
E T Q V L N Q T S R L E I Q L L E
msh01094 781 GAGACCCAGGTACTAAATCAAACATCCCGACTTGAAATACAACTGCTAGA 830
||||||||||||||||||||||| || |||||||| ||||| ||||| ||
hk04939 796 GAGACCCAGGTACTAAATCAAACTTCTCGACTTGAGATACAGCTGCTGGA 845
E T Q V L N Q T S R L E I Q L L E
851 ----+----*----+----*----+----*----+----*----+----* 900
N S L S T Y K L E K Q L L Q Q T N
msh01094 831 GAATTCATTATCAACATACAAGCTAGAGAAGCAACTTCTCCAACAGACAA 880
|||||||||||| || ||||||||||||||||||||||| ||||||||||
hk04939 846 GAATTCATTATCCACCTACAAGCTAGAGAAGCAACTTCTTCAACAGACAA 895
N S L S T Y K L E K Q L L Q Q T N
901 ----+----*----+----*----+----*----+----*----+----* 950
E I L K I H E K N S L L E H K I
msh01094 881 ATGAAATTCTGAAGATTCACGAAAAAAACAGTTTACTAGAGCACAAAATC 930
||||||| ||||||| || ||||||||||||||| |||| || ||||||
hk04939 896 ATGAAATCTTGAAGATCCATGAAAAAAACAGTTTATTAGAACATAAAATC 945
E I L K I H E K N S L L E H K I
951 ----+----*----+----*----+----*----+----*----+----* 1000
L E M E G K H K E E L D T L K E E
msh01094 931 TTAGAAATGGAGGGAAAACACAAAGAAGAATTGGACACCTTGAAGGAGGA 980
||||||||||| ||||||||||| ||||| ||||||||||| ||||| ||
hk04939 946 TTAGAAATGGAAGGAAAACACAAGGAAGAGTTGGACACCTTAAAGGAAGA 995
L E M E G K H K E E L D T L K E E
1001 ----+----*----+----*----+----*----+----*----+----* 1050
K E N L Q G L V S R Q T F I I Q E
msh01094 981 GAAAGAAAACCTTCAAGGCTTGGTTTCTCGTCAGACATTCATCATCCAGG 1030
|||||| |||||||||||||||||| ||||||| |||| || |||||||
hk04939 996 GAAAGAGAACCTTCAAGGCTTGGTTACTCGTCAAACATATATAATCCAGG 1045
K E N L Q G L V T R Q T Y I I Q E
1051 ----+----*----+----*----+----*----+----*----+----* 1100
L E K Q L S R A T N N N S I L Q
msh01094 1031 AGTTGGAGAAGCAACTTAGTAGAGCTACCAACAACAACAGCATCCTGCAG 1080
|| |||| |||||| | | |||||||||| ||||||||| |||| |||
hk04939 1046 AGCTGGAAAAGCAATTAAACAGAGCTACCACCAACAACAGTGTCCTTCAG 1095
L E K Q L N R A T T N N S V L Q
1101 ----+----*----+----*----+----*----+----*----+----* 1150
K Q Q L E L M D T V H N L V S L C
msh01094 1081 AAGCAACAACTGGAGCTCATGGACACAGTTCATAACCTTGTCAGCCTTTG 1130
||||| ||||||||||| ||||||||||| || |||||||||| |||||
hk04939 1096 AAGCAGCAACTGGAGCTGATGGACACAGTCCACAACCTTGTCAATCTTTG 1145
K Q Q L E L M D T V H N L V N L C
1151 ----+----*----+----*----+----*----+----*----+----* 1200
T K E V L L K G G K R E E E K P
msh01094 1131 CACTAAAGAA...GTTTTGCTAAAGGGAGGAAAAAGAGAAGAAGAGAAAC 1177
|||||||||| ||||| |||||||||||||||||||| ||||||||||
hk04939 1146 CACTAAAGAAGGTGTTTTACTAAAGGGAGGAAAAAGAGAGGAAGAGAAAC 1195
T K E G V L L K G G K R E E E K P
1201 ----+----*----+----*----+----*----+----*----+----* 1250
F R D C A D V Y Q A G F N K S G
msh01094 1178 CATTTCGAGACTGTGCAGATGTATATCAAGCTGGTTTTAATAAAAGTGGA 1227
||||| ||||||||||||||||||||||||||||||||||||||||||||
hk04939 1196 CATTTAGAGACTGTGCAGATGTATATCAAGCTGGTTTTAATAAAAGTGGA 1245
F R D C A D V Y Q A G F N K S G
1251 ----+----*----+----*----+----*----+----*----+----* 1300
I Y T I Y F N N M P E P K K V F C
msh01094 1228 ATCTACACTATTTATTTTAATAATATGCCAGAACCCAAAAAGGTATTTTG 1277
||||||||||||||| |||||||||||||||||||||||||||| |||||
hk04939 1246 ATCTACACTATTTATATTAATAATATGCCAGAACCCAAAAAGGTGTTTTG 1295
I Y T I Y I N N M P E P K K V F C
1301 ----+----*----+----*----+----*----+----*----+----* 1350
N M D V N G G G W T V I Q H R E D
msh01094 1278 CAATATGGATGTGAATGGGGGAGGTTGGACAGTAATACAACACCGGGAAG 1327
|||||||||||| ||||||||||||||||| ||||||||||| || ||||
hk04939 1296 CAATATGGATGTCAATGGGGGAGGTTGGACTGTAATACAACATCGTGAAG 1345
N M D V N G G G W T V I Q H R E D
1351 ----+----*----+----*----+----*----+----*----+----* 1400
G S L D F Q R G W K E Y K M G F
msh01094 1328 ATGGAAGCCTGGATTTCCAGAGGGGCTGGAAGGAGTATAAAATGGGTTTT 1377
||||||| || |||||||| || ||||||||||| |||||||||||||||
hk04939 1346 ATGGAAGTCTAGATTTCCAAAGAGGCTGGAAGGAATATAAAATGGGTTTT 1395
G S L D F Q R G W K E Y K M G F
1401 ----+----*----+----*----+----*----+----*----+----* 1450
G N P S G E Y W L G N E F I F A I
msh01094 1378 GGGAATCCCTCTGGTGAATATTGGCTTGGGAACGAGTTCATTTTTGCAAT 1427
|| |||||||| |||||||||||||| ||||| ||||| |||||||| ||
hk04939 1396 GGAAATCCCTCCGGTGAATATTGGCTGGGGAATGAGTTTATTTTTGCCAT 1445
G N P S G E Y W L G N E F I F A I
1451 ----+----*----+----*----+----*----+----*----+----* 1500
T S Q R Q Y M L R I E L M D W E G
msh01094 1428 AACCAGTCAGAGGCAGTACATGCTGAGGATTGAGCTGATGGACTGGGAAG 1477
||||||||||||||||||||||| || |||||| | |||||||||||||
hk04939 1446 TACCAGTCAGAGGCAGTACATGCTAAGAATTGAGTTAATGGACTGGGAAG 1495
T S Q R Q Y M L R I E L M D W E G
1501 ----+----*----+----*----+----*----+----*----+----* 1550
N R A Y S Q Y D R F H I G N E K
msh01094 1478 GGAACCGAGCCTACTCACAGTACGACAGATTCCACATAGGAAATGAAAAG 1527
||||||||||||| |||||||| |||||||||||||||||||||||||||
hk04939 1496 GGAACCGAGCCTATTCACAGTATGACAGATTCCACATAGGAAATGAAAAG 1545
N R A Y S Q Y D R F H I G N E K
1551 ----+----*----+----*----+----*----+----*----+----* 1600
Q N Y R L Y L K G H T G T A G K Q
msh01094 1528 CAGAACTATAGGTTATATTTAAAAGGTCACACAGGGACAGCAGGCAAACA 1577
|| ||||||||||| ||||||||||||||||| ||||||||||| |||||
hk04939 1546 CAAAACTATAGGTTGTATTTAAAAGGTCACACTGGGACAGCAGGAAAACA 1595
Q N Y R L Y L K G H T G T A G K Q
1601 ----+----*----+----*----+----*----+----*----+----* 1650
S S L I L H G A D F S T K D A D N
msh01094 1578 GAGCAGCTTGATCTTACACGGTGCTGATTTCAGCACGAAGGATGCTGATA 1627
||||||| |||||||||||||||||||||||||||| || ||||||||||
hk04939 1596 GAGCAGCCTGATCTTACACGGTGCTGATTTCAGCACTAAAGATGCTGATA 1645
S S L I L H G A D F S T K D A D N
1651 ----+----*----+----*----+----*----+----*----+----* 1700
D N C M C K C A L M L T G G W W
msh01094 1628 ACGACAACTGTATGTGCAAATGCGCTCTCATGCTAACAGGAGGTTGGTGG 1677
| |||||||||||||||||||| || |||||| |||||||||| ||||||
hk04939 1646 ATGACAACTGTATGTGCAAATGTGCCCTCATGTTAACAGGAGGATGGTGG 1695
D N C M C K C A L M L T G G W W
1701 ----+----*----+----*----+----*----+----*----+----* 1750
F D A C G P S N L N G M F Y T A G
msh01094 1678 TTCGATGCCTGTGGCCCTTCCAATCTAAATGGAATGTTCTACACTGCGGG 1727
|| ||||| |||||||| ||||||||||||||||||||||| ||||||||
hk04939 1696 TTTGATGCTTGTGGCCCCTCCAATCTAAATGGAATGTTCTATACTGCGGG 1745
F D A C G P S N L N G M F Y T A G
1751 ----+----*----+----*----+----*----+----*----+----* 1800
Q N H G K L N G I K W H Y F K G P
msh01094 1728 ACAAAATCATGGAAAACTGAATGGGATAAAGTGGCACTACTTCAAAGGGC 1777
|||||| |||||||||||||||||||||||||||||||||||||||||||
hk04939 1746 ACAAAACCATGGAAAACTGAATGGGATAAAGTGGCACTACTTCAAAGGGC 1795
Q N H G K L N G I K W H Y F K G P
1801 ----+----*----+----*----+----*----+----*----+----* 1850
S Y S L R S T T M M I R P L D F
msh01094 1778 CCAGTTACTCCTTACGTTCCACCACCATGATGATCCGGCCCTTGGACTTT 1827
|||||||||||||||||||||| || |||||||| || || || || |||
hk04939 1796 CCAGTTACTCCTTACGTTCCACAACTATGATGATTCGACCTTTAGATTTT 1845
S Y S L R S T T M M I R P L D F
1851 ----+----*----+----*----+----*----+----*----+----* 1900
*
msh01094 1828 TGAAGGTGCTCTGCCAGTA.....TTAGAAAGCTGCAAAGAAAGCTGGGC 1872
|||| | || || ||| | | |||||| |||||||| | ||
hk04939 1846 TGAAAGCGCAATGTCAGAAGCGATTATGAAAGCAACAAAGAAATCCGGAG 1895
*
1901 ----+----*----+----*----+----*----+----*----+----* 1950
msh01094 1873 ATGTTCCCAGATGAGAAGCTAGTCAGAGGCTTCAGAAACAACCAACATTG 1922
| | | |||| |||||| || | | |||||||| ||| ||| ||||
hk04939 1896 AAGCTGCCAGGTGAGAAACTGTTTGAAAACTTCAGAAGCAAACAATATTG 1945
1951 ----+----*----+----*----+----*----+----*----+----* 2000
msh01094 1923 TCTCCATTCCAGCAGCAAGTG...GTTATGTCATGTCACCTGGGTT.... 1965
||||| |||||||| ||||| ||||||| | |||||| ||||
hk04939 1946 TCTCCCTTCCAGCAATAAGTGGTAGTTATGTGAAGTCACCAAGGTTCTTG 1995
2001 ----+----*----+----*----+----*----+----*----+----* 2050
msh01094 1966 ..........TGGAGCCTTCTGAGGTCAACAGAATCGCCACTTGGG.... 2001
||||||| | |||| ||| ||| || | |||||||
hk04939 1996 ACCGTGAATCTGGAGCCGTTTGAGTTCACAAGAGTCTCTACTTGGGGTGA 2045
2051 ----+----*----+----*----+----*----+----*----+----* 2100
msh01094 2002 ....................TCCAGAGAATGCCACTCACAATCATG..TT 2029
| ||| || ||||| || || | ||
hk04939 2046 CAGTGCTCACGTGGCTCGACTATAGAAAACTCCACTGACTGTCGGGCTTT 2095
2101 ----+----*----+----*----+----*----+----*----+----* 2150
msh01094 2030 TAAAAGGGAAGAAACTTCTCAGCTTGCTGCACTTCAAAGTGCTACTGGAT 2079
||||||||||||||| || ||||||||| ||||||| | ||||||||
hk04939 2096 AAAAAGGGAAGAAACTGCTGAGCTTGCTGTGCTTCAAACTACTACTGGAC 2145
2151 ----+----*----+----*----+----*----+----*----+----* 2200
msh01094 2080 CACATTCTGAACTTATAACATCCTGATGCTGAATGCAACTTGTTTCATGT 2129
| ||| || | ||| | || |||| | ||| | ||||||||
hk04939 2146 CTTATTTTGGAACTATGGTAGCCAGATGATAAATATGGTTAATTTCATGT 2195
2201 ----+----*----+----*----+----*----+----*----+----* 2250
msh01094 2130 AAAA.............GCAAAAGAAGAAGAAACAGCA..AATGGGAACA 2164
|||| |||| |||| | ||| | ||| | ||||
hk04939 2196 AAAACAGAAAAAAAGAGTGAAAAAGAGAATATACATGAAGAATAGAAACA 2245
2251 ----+----*----+----*----+----*----+----*----+----* 2300
msh01094 2165 GGCTTTCCAGAATCTGTTG...AAGATGGATTGTGGAGGTGACCTGGTAT 2211
|| | ||| |||| ||| |||||| ||| | |||| ||| |
hk04939 2246 AGCCTGCCATAATCCTTTGGAAAAGATGTATTATACCAGTGAAAAGGTGT 2295
2301 ----+----*----+----*----+----*----+----*----+----* 2350
msh01094 2212 CA.CTGTAGGAAATCCTGCTAACAA..TACATCACTGCCCAA....AAGA 2254
| | || | || ||| ||||||| || | ||| ||| | |
hk04939 2296 TATATCTATGCAAACCTACTAACAAATTATACTGTTGCACAATTTTGATA 2345
2351 ----+----*----+----*----+----*----+----*----+----* 2400
msh01094 2255 GACATAAAGAAAAGTTTTGTCTACTGAGTTGGCTAAAAGTTAGTGGAGTT 2304
| || |||| || ||||| ||||||||| |||| |||| |||| ||
hk04939 2346 AAAATTTAGAACAGCATTGTCCTCTGAGTTGGTTAAATGTTAATGGATTT 2395
2401 ----+----*----+----*----+----*----+----*----+----* 2450
msh01094 2305 CACCTGCCCATTTCCAGTATCATATTTACTAGCTGATTTCAGGTTTCCTG 2354
|| ||| | ||||||||||||| ||||||| ||||||| | || ||
hk04939 2396 CAGAAGCCTAATTCCAGTATCATACTTACTAGTTGATTTCTGCTTACCCA 2445
2451 ----+----*----+----*----+----*----+----*----+----* 2500
msh01094 2355 TGTTCAAATGTAAACTCTGTTCTTGTAAGCCATGATACAATATAGTACAT 2404
| |||||||| ||| || || ||||||||||| || | | ||||||||
hk04939 2446 TCTTCAAATGAAAATTCCATTTTTGTAAGCCATAATGAACTGTAGTACAT 2495
2501 ----+----*----+----*----+----*----+----*----+----* 2550
msh01094 2405 GGAGGATAAGAGTTGGGGGTAGAAGGTGCCTAAAGACTCTTGAGTTTCTG 2454
||| ||||| || | ||||||| || | ||| |||
hk04939 2496 GGACAATAAGTGT..GTGGTAGAAACAAACTCCATTACTCTGATTTT... 2540
2551 ----+----*----+----*----+----*----+----*----+----* 2600
msh01094 2455 GAGATTCAGTTTTCAAAAGATATAA..AATATAATCAAGAATGGATAAAA 2502
||| ||||||||| || | || || ||||||||| | |||| |
hk04939 2541 .TGATACAGTTTTCAGAAAAAGAAATGAACATAATCAAGTAAGGATGTAT 2589
2601 ----+----*----+----*----+----*----+----*----+----* 2650
msh01094 2503 CAGGTGAAA....ATCACACTCATGCTACAGTGTTCCTTTAC.ATGAAAT 2547
||||||| | ||| | ||| ||| || ||| ||||| | |||
hk04939 2590 GTGGTGAAAACTTACCACCCCCATACTATGGTTTTCATTTACTCTAAAAA 2639
2651 ----+----*----+----*----+----*----+----*----+----* 2700
msh01094 2548 TTGATTAACTGATCCACAAGAATGTTTAGAGCCTGAGTATA.TATAAAGA 2596
||||| | |||| | || || |||| |||||||||| | | |||||
hk04939 2640 CTGATTGAATGATATATAAATATATTTATAGCCTGAGTAAAGTTAAAAGA 2689
2701 ----+----*----+----*----+----*----+----*----+----* 2750
msh01094 2597 CTGGAAGTGTTATCACCCAGTTCTCAAAACAATAAGCAGGCAGTTAACAT 2646
|| || ||||| | |||||| |||| |||| || ||| |||| ||
hk04939 2690 ATGTAAAATATATCATCAAGTTCTTAAAATAATATACATGCATTTAATAT 2739
2751 ----+----*----+----*----+----*----+----*----+----* 2800
msh01094 2647 TCTCATTGACAGTATGTAGGAGAGCAATATGTGG................ 2680
| | |||| | ||| |||| |||||||| | |
hk04939 2740 TTCCTTTGATATTATACAGGAAAGCAATATTTTGGAGTATGTTAAGTTGA 2789
2801 ----+----*----+----*----+----*----+----*----+----* 2850
msh01094 2681 ......AGTACTTGAGTTGGAACAGCCCATTGTACAG....ATCTTGCAT 2720
|| | | |||| ||| |||| ||||| |||||||
hk04939 2790 AGTAAAAGCAAGTACTCTGGAGCAGTTCATTTTACAGTATCTACTTGCAT 2839
2851 ----+----*----+----*----+----*----+----*----+----* 2900
msh01094 2721 GTATTTGCATATGTATGGCATTATTATTTTTAAAGTGTTCGTAGGCCTTC 2770
|| | | |||| | | | | |||||||| ||| | || ||| || |
hk04939 2840 GTGTATACATACATGTAACTTCATTATTTTAAAAATATTTTTAGAACTCC 2889
2901 ----+----*----+----*----+----*----+----*----+----* 2950
msh01094 2771 AATTCTTCATACAGATTTTTCATGCTAATTTAATTTTTGTTAATTAACTG 2820
||| | ||| | | | | || ||||||||||| ||||| ||||||||||
hk04939 2890 AATAC.TCACCCTGTTATGTCTTGCTAATTTAAATTTTGCTAATTAACTG 2938
2951 ----+----*----+----*----+----*----+----*----+----* 3000
msh01094 2821 CAATGTACTTACTAAATATATCCTACTCCAGT.TTTTTATGAGTTATACT 2869
|| | ||||| | || | || |||||| | | || || | |||
hk04939 2939 AAACATGCTTACCAGATTCACACTGTTCCAGTGTCTATAAAAGAAACACT 2988
3001 ----+----*----+----*----+----*----+----*----+----* 3050
msh01094 2870 TTAAAGTCTACAAATAATAGAAGAATTTTAAATATCATTGTACATAATAT 2919
|| ||||||| ||| |||| || |||| |||||||||||||||||| ||
hk04939 2989 TTGAAGTCTATAAAAAATAAAATAATTATAAATATCATTGTACATAGCAT 3038
3051 ----+----*----+----*----+----*----+----*----+----* 3100
msh01094 2920 .CTTATACCTGTCCATGCTAAACTCAATAATTGTTTAGTCTGGAATATAT 2968
||||| ||| | |||| |||| | ||| ||||||||||
hk04939 3039 GTTTATATCTGCAAA....AAACCTAATAGCTAATTAATCTGGAATATGC 3084
3101 ----+----*----+----*----+----*----+----*----+----* 3150
msh01094 2969 GATGCTGTCCACAACTGATGACTATAAATATGATTGTTTAAAGACAGTTA 3018
| ||||| || ||||| | | || | | || | ||||| | ||
hk04939 3085 AACATTGTCCTTAATTGATG.CAAATAACACAAATGCTCAAAGAAATCTA 3133
3151 ----+----*----+----*----+----*----+----*----+----* 3200
msh01094 3019 CCATA.CTATTGATTAAATATATTACTCTGCATAGTTTTTCTCCTCCAGG 3067
| ||| | || || ||||| || | ||| |||| | |||||||| |||
hk04939 3134 CTATATCCCTTAATGAAATACATCATTCTTCATA.TATTTCTCCTTCAG. 3181
3201 ----+----*----+----*----+----*----+----*----+----* 3250
msh01094 3068 ATCTGTTTCTTCAAGCAATTTCTACCTTGTAAAA..TAATGGTAGTAGAG 3115
|| || | | | ||||||| || || ||||| || | || |||
hk04939 3182 .TCCATTCCCTTAGGCAATTTTTAATTTTTAAAAATTATTATCAGGGGAG 3230
3251 ----+----*----+----*----+----*----+----*----+----* 3300
msh01094 3116 .AAAATTGACATAACTCCT...TGTACAAAAGAATTATAGAAAA...... 3155
||||||| || |||| | |||| | | |||| ||||
hk04939 3231 AAAAATTGGCAAAACTATTATATGTAAGGGAAATATATACAAAAAGAAAA 3280
3301 ----+----*----+----*----+----*----+----*----+----* 3350
msh01094 3156 ..AATTACAGTCATTTGACTAGGAAGTTTCTGATTGTTAGCTGCTATAAG 3203
||| | ||||| |||||| ||| |||||| || ||| ||| ||||
hk04939 3281 TTAATCATAGTCACCTGACTAAGAA.ATTCTGACTGCTAGTTGCCATAAA 3329
3351 ----+----*----+----*----+----*----+----*----+----* 3400
msh01094 3204 TGCCTTAGTTAAGATGCCCCTGTGTTATAATATGTAGTAAATGAAGTTTT 3253
| || | | | || ||| || ||||| | | ||| |||| ||||
hk04939 3330 TAACTCAATGGAAATATTCCTATGGGATAATGTATTTTAAGTGAATTTTT 3379
3401 ----+----*----+----*----+----*----+----*----+----* 3450
msh01094 3254 GGACACAGGATTCTGTGATAACCTGATGTGACTGCAGTATTCTATC...A 3300
| | | ||| || |||||| |||| |||| |
hk04939 3380 G...............GGGTGCTTGAAGTTACTGCATTATTTTATCAAGA 3414
3451 ----+----*----+----*----+----*----+----*----+----* 3500
msh01094 3301 AGTTCTCTTTGTTGTTAAATGTTCAAGGTTATAGTAGAAAAAAAACATTC 3350
||| ||| || ||| ||| ||||||||| || ||| | ||
hk04939 3415 AGTCTTCTCTGCCTGTAAGTGTCCAAGGTTATGACAG.TAAACAGTTTTT 3463
3501 ----+----*----+----*----+----*----+----*----+----* 3550
msh01094 3351 AATCAAACACAATTTGCCATGAAAGGAGAGAACTAAATGTAGGCACCAGT 3400
| | ||||| | | | ||| | |||| || | || | || | |
hk04939 3464 ATTAAAACATGAGTCACTATGGGATGAGAAAATTGAAATAAAGCTACTGG 3513
3551 ----+----*----+----*----+----*----+----*----+----* 3600
msh01094 3401 TCTGTTTTCTCAGAGAAGGAGAAGACTTTCTGGGACGTACATGTACCAAA 3450
| | ||||| | ||| ||| | | | | ||| |||| |
hk04939 3514 GC.CTCCTCTCATAAAAG.AGACAGTTGTTGGCAAGGTAGCAATACC..A 3559
3601 ----+----*----+----*----+----*----+----*----+----* 3650
msh01094 3451 ATATAAATCTTGATAACCGCAGCCACAAAGCCTTAGTGACTTTCCTCTAC 3500
| | || |||| | || | |||| | |||||| || ||||||| |
hk04939 3560 GTTTCAAACTTGGTGACTTGATCCACTATGCCTTAATG.GTTTCCTCCAT 3608
3651 ----+----*----+----*----+----*----+----*----+----* 3700
msh01094 3501 CTGGTAAGACAGAGCTCTTCATGCTTTTAAGAAAA..GATTCTGAATGCT 3548
|| || | | |||| |||| | ||||||||| || | || | |
hk04939 3609 TTGAGAAAATAAAGCTATTCACATTGTTAAGAAAAATACTTTTTAAAGTT 3658
3701 ----+----*----+----*----+----*----+----*----+----* 3750
msh01094 3549 TCCCACCACATCTTTCTTATATTTATATGTGTTCATAAAGTACTATTTTG 3598
| ||| || ||||| |||||||||| ||| | || | |||||
hk04939 3659 TACCATCAAGTCTTTTTTATATTTATGTGTCTGTATTCTACCCCTTTTTG 3708
3751 ----+----*----+----*----+----*----+----*----+----* 3800
msh01094 3599 CCTTACAAGAGGTATGTGCCGACATTACAGGATTTTTCTACT.ATAGTGA 3647
||||||||| | ||| ||| | |||| | ||||||||| | | |||
hk04939 3709 CCTTACAAGTGATATTTGCAGGTATTATACCATTTTTCTATTCTTGGTGG 3758
3801 ----+----*----+----*----+----*----+----*----+----* 3850
msh01094 3648 CTCCTTCACAGCTTTCTTAAGCCTAGCCCTCTAAAAGCTTC......CTT 3691
|| ||||| ||| ||||||| || ||||||| |||| ||
hk04939 3759 CTTCTTCATAGC..AGGTAAGCCTCTCCTTCTAAAAACTTCTCAACTGTT 3806
3851 ----+----*----+----*----+----*----+----*----+----* 3900
msh01094 3692 CTCATTTAGATGAAAGAAAATGAGTATTTTTGTGATTCTGGTGATTGTGG 3741
||||||| ||||||||||||||||||
hk04939 3807 TTCATTTAAGGGAAAGAAAATGAGTATTT..................... 3835
3901 ----+----*----+----*----+----*----+----*----+----* 3950
msh01094 3742 TGGTTGTTGTTGTTGTTGTTGTTGTTCCCACAGA...TGTTCGAAAACTC 3788
| || |||||| ||||| | | ||| |
hk04939 3836 ............TGTCCTTTTGTGTTCCTACAGACACTTTCTTAAACCAG 3873
3951 ----+----*----+----*----+----*----+----*----+----* 4000
msh01094 3789 ATCTTGGGTAA.....ATTGTTTTTCAATCCACATTACAAAAATAAAGCG 3833
| |||| ||| | | ||| || || |||||||||| |||
hk04939 3874 TTTTTGGATAAAGAATACTATTTCCAAACTCATATTACAAAAACAAAATA 3923
4001 ----+----*----+----*----+----*----+----*----+----* 4050
msh01094 3834 AAACAAGGAGAAAAAAAAGCATGGAATTTACTGATTTGTTATGTGGGTTT 3883
||| || | |||| |||||||| |||||||| |||||| | |||||||
hk04939 3924 AAATAATAAAAAAAGAAAGCATGATATTTACTGTTTTGTTGTCTGGGTTT 3973
4051 ----+----*----+----*----+----*----+----*----+----* 4100
msh01094 3884 GAAAAATAAGATATTGTTTTCAGTTATTTATAATAAAGCAGTATAA.... 3929
|| |||| | ||||||||| || |||||||||||||| ||||||||
hk04939 3974 GAGAAATGAAATATTGTTTCCAATTATTTATAATAAATCAGTATAAAATG 4023
4101 ----+----*----+----*----+----*----+----*----+----* 4150
msh01094 3930 ............TGTGTACATTGTATAATGCCAACATGTGTGTAGCAATT 3967
| ||| ||| | |||| | |||||| | | ||||||
hk04939 4024 TTTTATGATTGTTATGTGTATTATGTAATACGTACATGTTTATGGCAATT 4073
4151 ----+----*----+----*----+----*----+----*----+----* 4200
msh01094 3968 TGATACGCATAGCTTTTTGCATTTAATTAATGCAGGGCAGAAAAATTAGA 4017
| | | | | | | | ||||||| | ||| || | ||||||
hk04939 4074 TAACATG......TGTATTCTTTTAATTGTTTCAGAATAGGATAATTAGG 4117
4201 ----+----*----+----*----+----*----+----*----+----* 4250
msh01094 4018 TAACTCGAACTTTGTCTTGAAGTTTCTATTTCAATAAAAGCTGTGTCATT 4067
| | ||||| |||||||| || ||| | | | || || ||
hk04939 4118 T.ATTCGAATTTTGTCTTTAAAATTCATGTGGTTTCTATGCAAAGTTCTT 4166
4251 ----+----*----+----*----+----*----+----*----+ 4295
msh01094 4068 TCTATG....................................... 4073
|||
hk04939 4167 CATATCATCACAACATTATTTGATTTAAATAAAATTGAAAGTAAT 4211