FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0989.ptfa, 807 aa vs ./tmplib.26680 library 1768210 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 11.1270+/-0.00961; mu= -11.0557+/- 0.636 mean_var=459.6203+/-110.703, 0's: 0 Z-trim: 8 B-trim: 25 in 1/35 Lambda= 0.0598 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mFLJ00155 ( 785 res) mic02031 ( 785) 1230 121 5.9e-28 mKIAA1071 ( 539 res) mpm04376 ( 539) 676 73 1.1e-13 >>mFLJ00155 ( 785 res) mic02031 (785 aa) initn: 1495 init1: 408 opt: 1230 Z-score: 594.3 bits: 120.8 E(): 5.9e-28 Smith-Waterman score: 1550; 42.517% identity (50.000% ungapped) in 755 aa overlap (137-793:4-743) 110 120 130 140 150 mKIAA0 QEPQGQEHQGGETHLAENRLYRLCPQPSKGEELPTYEEAKAHSQYYAAQQA--------- :::::::::::.::.. .:: mFLJ00 QNNEELPTYEEAKAQSQFFRGQQQQQQQQQQQQ 10 20 30 160 170 180 190 mKIAA0 -----GSRPHVGDRDPRGGVS---------------GGGRRQDEALRELRHGHVRSLSER :. : ::.: .: ..::::.::..::::::::: mFLJ00 QQQQQGQGPLSHTYYMAGGTSQKSRTEGRPTVNRANSGQAHKDEALKELKQGHVRSLSER 40 50 60 70 80 90 200 210 220 230 240 250 mKIAA0 LLQLSLERNGARVPSHMSSSHSFPQLARSQQGPQPRGPPAEGPEPRGPPPQYP------- ..:::::::::. .:. :: . .. . . :.: : .. .::::::.:: mFLJ00 IMQLSLERNGAK--QHLPSSGNGKSFKAGGE-PSPAQPVCKALDPRGPPPEYPFKTKPMK 100 110 120 130 140 150 260 270 280 290 300 mKIAA0 --------HAVM-AQETAAVTDPRYRPRSSPHFQHAEVRILQAQVPPVFLQQQQYQYLPQ :... .. .: .: .:. ..:: .:. : :: . .. :: mFLJ00 SPVSKNQDHGLYYNDQHPGVLHEMVKPYPAPQPARTEVAVLRYQPPPEYGVTSRPCQLPF 160 170 180 190 200 210 310 320 330 340 mKIAA0 P---QEHSP----------PLHPAALGHGPPSSFGPPAVEGPPSAQATLGSAHLAQMETV : :.::: :: ..: : :.. : : . :: .: .: . mFLJ00 PSTVQQHSPMSSQTSSIGGTLHSVSLPLPLPISLAASQ-PLPASPNQQLGPDAFAIVERA 220 230 240 250 260 350 360 370 380 390 400 mKIAA0 LRENARLQRDNERLQRELESTSEKAGRIEKLENEIQRLSEAHESLMRTSSKREALEKTMR . : ..:. :..::.. ..: ...:.:.:.: .:::.:::.....:::.:.:.:: mFLJ00 QQMVEILTEENRVLHQELQGCYDNADKLHKFEKELQSISEAYESLVKSTTKRESLDKAMR 270 280 290 300 310 320 410 420 430 440 450 460 mKIAA0 NKMDGEMRRLQDFNRDLRERLESANRHLASKTQEAQAGSQDMVAK--LLAQSYEQQQEQE .:..::.:::.:::::::.:::.:::.:.:. . : .: .:. ..:. : .:.: mFLJ00 TKLEGEIRRLHDFNRDLRDRLETANRQLSSREYD---GHEDKAAESHYVSQNKEFLKEKE 330 340 350 360 370 380 470 480 490 500 510 520 mKIAA0 KLEREMALLRGAIEDQRRHAELLEQALGNAQSRAARAEEELRKKQAYVEKVERLQQALGQ ::: :.: .: : ::.::: :.:.:::.:::.:. . :::::.:::::::::.::::: : mFLJ00 KLEMELAAVRTASEDHRRHIEILDQALSNAQARVIKLEEELREKQAYVEKVEKLQQALTQ 390 400 410 420 430 440 530 540 550 560 570 580 mKIAA0 LQAACEKREQLELRLRTRLEQELKALRAQQRQTGTLAGGGGSHGGSAELSALRLSEQLRE ::.::::: :.: :::: ::.:: :::.::.. : : . : .: : : .:: mFLJ00 LQSACEKRGQMERRLRTWLERELDALRTQQKH------GTGPPVSLPECNAPALMELVRE 450 460 470 480 490 500 590 600 610 620 630 640 mKIAA0 KEEQILALEADMTKWEQKYLEERAMRQFAMDAAATAAAQRDTTLIRHSPQPS-PSSSFNE :::.:::::::::::::::::: ..:.:::.:::.:.:.::::. :: . : ::.. mFLJ00 KEERILALEADMTKWEQKYLEESTIRHFAMSAAAAATAERDTTISNHSRNGSYGESSLEA 510 520 530 540 550 560 650 660 670 680 690 mKIAA0 GLLP-------GNHRHQEMESRLKVLHAQILEKDAVIKVLQQRSRKDPGKATQGTLRPAK . : .:.: :.:: .: :::.:.::::.::::::::::: ::. ...::::. mFLJ00 HIWPEEEEVVQANRRCQDMEYTIKNLHAKIIEKDAMIKVLQQRSRKDAGKTDSASLRPAR 570 580 590 600 610 620 700 710 720 730 mKIAA0 SVPSIFAAAVGTQG--------------------WQG----LVSSERQTDAR-PAGDRVP ::::: :::.::.. :.: :...:.: .: : .: mFLJ00 SVPSI-AAATGTHSRQTSLTSSQLTEEKKEEKTTWKGSIGFLLGKEHQGQASAPLLPTTP 630 640 650 660 670 740 750 760 770 780 mKIAA0 AEE---PPATAPLPA-HTKHGSRDGSTQTDGPADNTSACLASEPD-GLLGCNSSQRTPSL : : .:. . :.: ::.:.::::: .. .:: :. : :. :. .: : mFLJ00 ASALSLPASTTSASSTHAKTGSKDSSTQTDKSTELFWPSMASLPSRGRLSTAPSN-SPIL 680 690 700 710 720 730 790 800 mKIAA0 DSIAATRVQDLSDMVEILI :: mFLJ00 KHPAAKGAVEKQENSPGHGKASEHRGRVSNLLHKPEFPDGEMMEVLI 740 750 760 770 780 >>mKIAA1071 ( 539 res) mpm04376 (539 aa) initn: 746 init1: 288 opt: 676 Z-score: 337.8 bits: 72.8 E(): 1.1e-13 Smith-Waterman score: 756; 46.226% identity (53.261% ungapped) in 318 aa overlap (523-807:1-309) 500 510 520 530 540 550 mKIAA0 LGNAQSRAARAEEELRKKQAYVEKVERLQQALGQLQAACEKREQLELRLRTRLEQELKAL :: ::::::::::::: :::::::.::..: mKIAA1 ALVQLQAACEKREQLEHRLRTRLERELESL 10 20 30 560 570 580 590 600 610 mKIAA0 RAQQRQTGTLAGGGGSHGGSAELSALRLSEQLREKEEQILALEADMTKWEQKYLEERAMR : :::: :... ...: .: : : ::::::.:::::::::::::::::: .:: mKIAA1 RIQQRQ------GNSQPTNASEYNAAALMELLREKEERILALEADMTKWEQKYLEENVMR 40 50 60 70 80 620 630 640 650 660 mKIAA0 QFAMDAAATAAAQRDTTLIRHSPQPSPSSSFN-------EGLLPGNHRHQEMESRLKVLH .::.:::::.:::::::.: :::. : ..... : .: .:.: .::.:.:.:: mKIAA1 HFALDAAATVAAQRDTTVISHSPNTSYDTALEARIQKEEEEILMANKRCLDMEGRIKTLH 90 100 110 120 130 140 670 680 690 700 710 mKIAA0 AQILEKDAVIKVLQQRSRKDPGKATQ-GTLRPAKSVPSIFAAAVGT-------------- :::.::::.::::::::::.:.:. : ...:::::. :: :. : mKIAA1 AQIIEKDAMIKVLQQRSRKEPSKTEQLSSMRPAKSLMSISNAGSGLLAHSSTLTGAPIME 150 160 170 180 190 200 720 730 740 750 760 mKIAA0 -----QGWQG----LVSSERQTDARPAGDRVPAEEPPATAPLPAHTKHGSRDGSTQTD-G ..:.: :.... ... :. .:. ::.: : ::.: :::: ::::. : mKIAA1 EKRDDKSWKGSLGVLLGGDYRVEPVPS---TPSPVPPSTPLLSAHSKTGSRDCSTQTERG 210 220 230 240 250 260 770 780 790 800 mKIAA0 PADNTSACLASEPDGLLG-CNSSQRTPSLDSIAATRVQDLSDMVEILI : .. .: .. . : .. . .... ::: . . . :.. mKIAA1 PESTKTAAVTPISAPMAGPVAAAAPAAAINATAATNTATAATNTTIMVAAAPVAVAAVAA 270 280 290 300 310 320 mKIAA1 PAAAAATPSPANAAALAAAAAPATSVSAATSVSAANSISPAAPVAPAAVVPPAAPVSPAA 330 340 350 360 370 380 807 residues in 1 query sequences 1768210 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:33:27 2006 done: Mon Mar 27 10:33:28 2006 Scan time: 0.960 Display time: 0.080 Function used was FASTA [version 3.4t11 Apr 17, 2002]