# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mpm12253.fasta.nr -Q ../query/mKIAA0019.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0019, 841 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7903302 sequences Expectation_n fit: rho(ln(x))= 6.1214+/-0.000202; mu= 9.8102+/- 0.011 mean_var=125.3406+/-23.472, 0's: 34 Z-trim: 91 B-trim: 0 in 0/66 Lambda= 0.114559 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|50897488|sp|Q80XC3.2|US6NL_MOUSE RecName: Full= ( 819) 5616 940.0 0 gi|122890677|emb|CAM13702.1| USP6 N-terminal like ( 842) 5604 938.0 0 gi|74196253|dbj|BAE33027.1| unnamed protein produc ( 819) 5602 937.7 0 gi|149021039|gb|EDL78646.1| USP6 N-terminal like ( ( 816) 5110 856.4 0 gi|148676036|gb|EDL07983.1| USP6 N-terminal like, ( 766) 4399 738.8 2e-210 gi|73949154|ref|XP_544260.2| PREDICTED: similar to ( 839) 4332 727.8 4.6e-207 gi|194672393|ref|XP_608934.4| PREDICTED: similar t ( 831) 4252 714.6 4.3e-203 gi|149021040|gb|EDL78647.1| USP6 N-terminal like ( ( 763) 3908 657.7 5.3e-186 gi|50897492|sp|Q92738.3|US6NL_HUMAN RecName: Full= ( 828) 3369 568.6 3.7e-159 gi|158259349|dbj|BAF85633.1| unnamed protein produ ( 828) 3369 568.6 3.7e-159 gi|117645556|emb|CAL38244.1| hypothetical protein ( 828) 3363 567.6 7.3e-159 gi|117646866|emb|CAL37548.1| hypothetical protein ( 828) 3360 567.1 1e-158 gi|122937432|ref|NP_001073960.1| USP6 N-terminal l ( 845) 3358 566.8 1.3e-158 gi|114629325|ref|XP_001135354.1| PREDICTED: USP6 N ( 828) 3350 565.5 3.3e-158 gi|114629323|ref|XP_521413.2| PREDICTED: USP6 N-te ( 845) 3339 563.7 1.2e-157 gi|149743587|ref|XP_001499567.1| PREDICTED: USP6 N ( 847) 3338 563.5 1.3e-157 gi|109088207|ref|XP_001082977.1| PREDICTED: USP6 N ( 961) 3325 561.4 6.3e-157 gi|126340402|ref|XP_001367551.1| PREDICTED: simila ( 861) 3030 512.6 2.8e-142 gi|149437033|ref|XP_001508840.1| PREDICTED: simila ( 842) 2919 494.3 9.1e-137 gi|80476553|gb|AAI08646.1| MGC131359 protein [Xeno ( 820) 2708 459.4 2.8e-126 gi|189518235|ref|XP_690625.3| PREDICTED: similar t ( 849) 2352 400.6 1.5e-108 gi|55251089|emb|CAH68910.1| novel protein [Danio r ( 423) 2063 352.5 2.2e-94 gi|47212400|emb|CAF96702.1| unnamed protein produc ( 561) 2008 343.5 1.5e-91 gi|189442657|gb|AAI67441.1| Si:ch211-198d18.2 prot ( 747) 1992 341.0 1.1e-90 gi|67969147|dbj|BAE00927.1| unnamed protein produc ( 504) 1829 313.9 1.1e-82 gi|53127308|emb|CAG31037.1| hypothetical protein [ ( 481) 1808 310.4 1.2e-81 gi|47215245|emb|CAG01137.1| unnamed protein produc ( 691) 1786 306.9 1.9e-80 gi|163916009|gb|AAI57166.1| LOC100135167 protein [ ( 320) 1766 303.3 1.1e-79 gi|94732443|emb|CAK04935.1| novel protein similar ( 409) 1733 297.9 5.6e-78 gi|125822232|ref|XP_686696.2| PREDICTED: similar t ( 603) 1733 298.1 7.3e-78 gi|126344814|ref|XP_001381839.1| PREDICTED: hypoth ( 493) 1722 296.2 2.2e-77 gi|189537557|ref|XP_689159.3| PREDICTED: similar t ( 825) 1708 294.1 1.6e-76 gi|118091352|ref|XP_421043.2| PREDICTED: hypotheti ( 742) 1667 287.3 1.6e-74 gi|220678271|emb|CAX13002.1| novel protein similar ( 360) 1650 284.2 6.9e-74 gi|210114797|gb|EEA62554.1| hypothetical protein B ( 359) 1639 282.3 2.4e-73 gi|115943129|ref|XP_781323.2| PREDICTED: hypotheti ( 829) 1618 279.2 4.8e-72 gi|115926881|ref|XP_001196038.1| PREDICTED: hypoth ( 796) 1613 278.4 8.3e-72 gi|194218611|ref|XP_001489584.2| PREDICTED: simila ( 651) 1568 270.9 1.3e-69 gi|210114784|gb|EEA62541.1| hypothetical protein B ( 359) 1553 268.1 4.6e-69 gi|212516894|gb|EEB18848.1| conserved hypothetical ( 616) 1508 260.9 1.2e-66 gi|156229228|gb|EDO50024.1| predicted protein [Nem ( 357) 1447 250.6 8.6e-64 gi|91094671|ref|XP_972558.1| PREDICTED: similar to ( 591) 1423 246.9 1.9e-62 gi|221107621|ref|XP_002162645.1| PREDICTED: simila ( 542) 1420 246.3 2.5e-62 gi|190586549|gb|EDV26602.1| hypothetical protein T ( 348) 1394 241.8 3.7e-61 gi|108874170|gb|EAT38395.1| conserved hypothetical ( 517) 1361 236.6 2.1e-59 gi|167866566|gb|EDS29949.1| ecotropic viral integr ( 543) 1342 233.4 1.9e-58 gi|66565150|ref|XP_624849.1| PREDICTED: similar to ( 571) 1342 233.5 2e-58 gi|224092764|ref|XP_002189749.1| PREDICTED: simila ( 960) 1335 232.5 6.4e-58 gi|167880934|gb|EDS44317.1| conserved hypothetical ( 482) 1328 231.1 8.8e-58 gi|156547297|ref|XP_001601486.1| PREDICTED: simila ( 594) 1328 231.2 1e-57 >>gi|50897488|sp|Q80XC3.2|US6NL_MOUSE RecName: Full=USP6 (819 aa) initn: 5616 init1: 5616 opt: 5616 Z-score: 5020.8 bits: 940.0 E(): 0 Smith-Waterman score: 5616; 100.000% identity (100.000% similar) in 819 aa overlap (23-841:1-819) 10 20 30 40 50 60 mKIAA0 ETLDSRSWFNTGLEQHPQRFAVMNSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDAD :::::::::::::::::::::::::::::::::::::: gi|508 MNSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDAD 10 20 30 70 80 90 100 110 120 mKIAA0 YLVYKVTDRFGFLHEEELPYHNAAADRQKQLEIERTSKWLKMLKKWERYKNTEKFHRRIY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|508 YLVYKVTDRFGFLHEEELPYHNAAADRQKQLEIERTSKWLKMLKKWERYKNTEKFHRRIY 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 KGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|508 KGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMF 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 RDRYGVKQQSLFHVLAAYSIYNTEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|508 RDRYGVKQQSLFHVLAAYSIYNTEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKH 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 AMHGFFVQGFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|508 AMHGFFVQGFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPF 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA0 RLNLRIWDIYIFEGERVLTAMSYTILKLHKKHLMKLSMEELVEFLQETLAKDFFFEDDFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|508 RLNLRIWDIYIFEGERVLTAMSYTILKLHKKHLMKLSMEELVEFLQETLAKDFFFEDDFV 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA0 IEQLQVSMAELKRAKLDLPEPGKEDEYPKKPLGQLPPESACVNHLSNGQRSVGRPSPKTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|508 IEQLQVSMAELKRAKLDLPEPGKEDEYPKKPLGQLPPESACVNHLSNGQRSVGRPSPKTS 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA0 SRREDGSPRKNHEHSPVHHSRNGTPERAGQSRRKSVDEGSKNLKHEAESQRKPSPGMQDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|508 SRREDGSPRKNHEHSPVHHSRNGTPERAGQSRRKSVDEGSKNLKHEAESQRKPSPGMQDS 400 410 420 430 440 450 490 500 510 520 530 540 mKIAA0 SRHYNHAAANQNSNAISNVRKEFMPKWRKPSDASAIERTTKYAVEGKSHSALPALPVAIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|508 SRHYNHAAANQNSNAISNVRKEFMPKWRKPSDASAIERTTKYAVEGKSHSALPALPVAIP 460 470 480 490 500 510 550 560 570 580 590 600 mKIAA0 GSAETRLPNSRQKMKALDGGEGKRGSNASQYDNVPGGESEHGASAEEGPERTHPHSPRKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|508 GSAETRLPNSRQKMKALDGGEGKRGSNASQYDNVPGGESEHGASAEEGPERTHPHSPRKH 520 530 540 550 560 570 610 620 630 640 650 660 mKIAA0 PEPSPSPPKVPNKFTFKVQPPSHVRYPPQLPEEDHRAAYPPSYSNPPVYHGNSPKHVPTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|508 PEPSPSPPKVPNKFTFKVQPPSHVRYPPQLPEEDHRAAYPPSYSNPPVYHGNSPKHVPTA 580 590 600 610 620 630 670 680 690 700 710 720 mKIAA0 HSGFVSTQISPRPQINPSRRPYGSSLSVDTSPEKAYSRPTPVVLPSSRIEVLPIDMGARG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|508 HSGFVSTQISPRPQINPSRRPYGSSLSVDTSPEKAYSRPTPVVLPSSRIEVLPIDMGARG 640 650 660 670 680 690 730 740 750 760 770 780 mKIAA0 YGSSGSPKNGQFILPPVDYLPENRKWSEVSYTYRPEMHGQSWTRDAHRSHLSNLPNYAAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|508 YGSSGSPKNGQFILPPVDYLPENRKWSEVSYTYRPEMHGQSWTRDAHRSHLSNLPNYAAF 700 710 720 730 740 750 790 800 810 820 830 840 mKIAA0 QHIPFQAHGLPEVSVDSPVRYKMSAAVEDASPPGYPYAGPSPSAHHYRNGEGLSVQESVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|508 QHIPFQAHGLPEVSVDSPVRYKMSAAVEDASPPGYPYAGPSPSAHHYRNGEGLSVQESVL 760 770 780 790 800 810 mKIAA0 L : gi|508 L >>gi|122890677|emb|CAM13702.1| USP6 N-terminal like [Mus (842 aa) initn: 5604 init1: 5604 opt: 5604 Z-score: 5010.0 bits: 938.0 E(): 0 Smith-Waterman score: 5604; 99.878% identity (100.000% similar) in 818 aa overlap (24-841:25-842) 10 20 30 40 50 mKIAA0 ETLDSRSWFNTGLEQHPQRFAVMNSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDA .::::::::::::::::::::::::::::::::::: gi|122 MIQVLQLVKELVTPSRQKAATAKEDSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDA 10 20 30 40 50 60 60 70 80 90 100 110 mKIAA0 DYLVYKVTDRFGFLHEEELPYHNAAADRQKQLEIERTSKWLKMLKKWERYKNTEKFHRRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 DYLVYKVTDRFGFLHEEELPYHNAAADRQKQLEIERTSKWLKMLKKWERYKNTEKFHRRI 70 80 90 100 110 120 120 130 140 150 160 170 mKIAA0 YKGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 YKGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIM 130 140 150 160 170 180 180 190 200 210 220 230 mKIAA0 FRDRYGVKQQSLFHVLAAYSIYNTEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 FRDRYGVKQQSLFHVLAAYSIYNTEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPK 190 200 210 220 230 240 240 250 260 270 280 290 mKIAA0 HAMHGFFVQGFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 HAMHGFFVQGFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTP 250 260 270 280 290 300 300 310 320 330 340 350 mKIAA0 FRLNLRIWDIYIFEGERVLTAMSYTILKLHKKHLMKLSMEELVEFLQETLAKDFFFEDDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 FRLNLRIWDIYIFEGERVLTAMSYTILKLHKKHLMKLSMEELVEFLQETLAKDFFFEDDF 310 320 330 340 350 360 360 370 380 390 400 410 mKIAA0 VIEQLQVSMAELKRAKLDLPEPGKEDEYPKKPLGQLPPESACVNHLSNGQRSVGRPSPKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 VIEQLQVSMAELKRAKLDLPEPGKEDEYPKKPLGQLPPESACVNHLSNGQRSVGRPSPKT 370 380 390 400 410 420 420 430 440 450 460 470 mKIAA0 SSRREDGSPRKNHEHSPVHHSRNGTPERAGQSRRKSVDEGSKNLKHEAESQRKPSPGMQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 SSRREDGSPRKNHEHSPVHHSRNGTPERAGQSRRKSVDEGSKNLKHEAESQRKPSPGMQD 430 440 450 460 470 480 480 490 500 510 520 530 mKIAA0 SSRHYNHAAANQNSNAISNVRKEFMPKWRKPSDASAIERTTKYAVEGKSHSALPALPVAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 SSRHYNHAAANQNSNAISNVRKEFMPKWRKPSDASAIERTTKYAVEGKSHSALPALPVAI 490 500 510 520 530 540 540 550 560 570 580 590 mKIAA0 PGSAETRLPNSRQKMKALDGGEGKRGSNASQYDNVPGGESEHGASAEEGPERTHPHSPRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 PGSAETRLPNSRQKMKALDGGEGKRGSNASQYDNVPGGESEHGASAEEGPERTHPHSPRK 550 560 570 580 590 600 600 610 620 630 640 650 mKIAA0 HPEPSPSPPKVPNKFTFKVQPPSHVRYPPQLPEEDHRAAYPPSYSNPPVYHGNSPKHVPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 HPEPSPSPPKVPNKFTFKVQPPSHVRYPPQLPEEDHRAAYPPSYSNPPVYHGNSPKHVPT 610 620 630 640 650 660 660 670 680 690 700 710 mKIAA0 AHSGFVSTQISPRPQINPSRRPYGSSLSVDTSPEKAYSRPTPVVLPSSRIEVLPIDMGAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 AHSGFVSTQISPRPQINPSRRPYGSSLSVDTSPEKAYSRPTPVVLPSSRIEVLPIDMGAR 670 680 690 700 710 720 720 730 740 750 760 770 mKIAA0 GYGSSGSPKNGQFILPPVDYLPENRKWSEVSYTYRPEMHGQSWTRDAHRSHLSNLPNYAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 GYGSSGSPKNGQFILPPVDYLPENRKWSEVSYTYRPEMHGQSWTRDAHRSHLSNLPNYAA 730 740 750 760 770 780 780 790 800 810 820 830 mKIAA0 FQHIPFQAHGLPEVSVDSPVRYKMSAAVEDASPPGYPYAGPSPSAHHYRNGEGLSVQESV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 FQHIPFQAHGLPEVSVDSPVRYKMSAAVEDASPPGYPYAGPSPSAHHYRNGEGLSVQESV 790 800 810 820 830 840 840 mKIAA0 LL :: gi|122 LL >>gi|74196253|dbj|BAE33027.1| unnamed protein product [M (819 aa) initn: 5602 init1: 5602 opt: 5602 Z-score: 5008.3 bits: 937.7 E(): 0 Smith-Waterman score: 5602; 99.756% identity (99.878% similar) in 819 aa overlap (23-841:1-819) 10 20 30 40 50 60 mKIAA0 ETLDSRSWFNTGLEQHPQRFAVMNSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDAD :::::::::::::::::::::::::::::::::::::: gi|741 MNSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDAD 10 20 30 70 80 90 100 110 120 mKIAA0 YLVYKVTDRFGFLHEEELPYHNAAADRQKQLEIERTSKWLKMLKKWERYKNTEKFHRRIY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 YLVYKVTDRFGFLHEEELPYHNAAADRQKQLEIERTSKWLKMLKKWERYKNTEKFHRRIY 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 KGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 KGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMF 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 RDRYGVKQQSLFHVLAAYSIYNTEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 RDRYGVKQQSLFHVLAAYSIYNTEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKH 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 AMHGFFVQGFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 AMHGFFVQGFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPF 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA0 RLNLRIWDIYIFEGERVLTAMSYTILKLHKKHLMKLSMEELVEFLQETLAKDFFFEDDFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 RLNLRIWDIYIFEGERVLTAMSYTILKLHKKHLMKLSMEELVEFLQETLAKDFFFEDDFV 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA0 IEQLQVSMAELKRAKLDLPEPGKEDEYPKKPLGQLPPESACVNHLSNGQRSVGRPSPKTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 IEQLQVSMAELKRAKLDLPEPGKEDEYPKKPLGQLPPESACVNHLSNGQRSVGRPSPKTS 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA0 SRREDGSPRKNHEHSPVHHSRNGTPERAGQSRRKSVDEGSKNLKHEAESQRKPSPGMQDS ::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::: gi|741 SRREDGSPRKNHEHSPVHHSRNGTPERAGQSRRKSVDEGSKNLKHEAGSQRKPSPGMQDS 400 410 420 430 440 450 490 500 510 520 530 540 mKIAA0 SRHYNHAAANQNSNAISNVRKEFMPKWRKPSDASAIERTTKYAVEGKSHSALPALPVAIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 SRHYNHAAANQNSNAISNVRKEFMPKWRKPSDASAIERTTKYAVEGKSHSALPALPVAIP 460 470 480 490 500 510 550 560 570 580 590 600 mKIAA0 GSAETRLPNSRQKMKALDGGEGKRGSNASQYDNVPGGESEHGASAEEGPERTHPHSPRKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 GSAETRLPNSRQKMKALDGGEGKRGSNASQYDNVPGGESEHGASAEEGPERTHPHSPRKH 520 530 540 550 560 570 610 620 630 640 650 660 mKIAA0 PEPSPSPPKVPNKFTFKVQPPSHVRYPPQLPEEDHRAAYPPSYSNPPVYHGNSPKHVPTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 PEPSPSPPKVPNKFTFKVQPPSHVRYPPQLPEEDHRAAYPPSYSNPPVYHGNSPKHVPTA 580 590 600 610 620 630 670 680 690 700 710 720 mKIAA0 HSGFVSTQISPRPQINPSRRPYGSSLSVDTSPEKAYSRPTPVVLPSSRIEVLPIDMGARG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 HSGFVSTQISPRPQINPSRRPYGSSLSVDTSPEKAYSRPTPVVLPSSRIEVLPIDMGARG 640 650 660 670 680 690 730 740 750 760 770 780 mKIAA0 YGSSGSPKNGQFILPPVDYLPENRKWSEVSYTYRPEMHGQSWTRDAHRSHLSNLPNYAAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 YGSSGSPKNGQFILPPVDYLPENRKWSEVSYTYRPEMHGQSWTRDAHRSHLSNLPNYAAF 700 710 720 730 740 750 790 800 810 820 830 840 mKIAA0 QHIPFQAHGLPEVSVDSPVRYKMSAAVEDASPPGYPYAGPSPSAHHYRNGEGLSVQESVL ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 QHIPFQVHGLPEVSVDSPVRYKMSAAVEDASPPGYPYAGPSPSAHHYRNGEGLSVQESVL 760 770 780 790 800 810 mKIAA0 L : gi|741 L >>gi|149021039|gb|EDL78646.1| USP6 N-terminal like (pred (816 aa) initn: 4313 init1: 2514 opt: 5110 Z-score: 4568.9 bits: 856.4 E(): 0 Smith-Waterman score: 5110; 91.087% identity (96.337% similar) in 819 aa overlap (23-841:1-816) 10 20 30 40 50 60 mKIAA0 ETLDSRSWFNTGLEQHPQRFAVMNSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDAD :::::::::::::::::::::::::::::::::::::: gi|149 MNSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDAD 10 20 30 70 80 90 100 110 120 mKIAA0 YLVYKVTDRFGFLHEEELPYHNAAADRQKQLEIERTSKWLKMLKKWERYKNTEKFHRRIY :::::::::::::::::::: :::::::::::::::::::::::.::::::::::::::: gi|149 YLVYKVTDRFGFLHEEELPYPNAAADRQKQLEIERTSKWLKMLKRWERYKNTEKFHRRIY 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 KGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 KGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMF 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 RDRYGVKQQSLFHVLAAYSIYNTEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 RDRYGVKQQSLFHVLAAYSIYNTEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKH 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 AMHGFFVQGFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 AMHGFFVQGFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPF 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA0 RLNLRIWDIYIFEGERVLTAMSYTILKLHKKHLMKLSMEELVEFLQETLAKDFFFEDDFV ::::::::::::::::.::::::::::::.:::::::::::::::::::::::::::::: gi|149 RLNLRIWDIYIFEGERILTAMSYTILKLHRKHLMKLSMEELVEFLQETLAKDFFFEDDFV 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA0 IEQLQVSMAELKRAKLDLPEPGKEDEYPKKPLGQLPPESACVNHLSNGQRSVGRPSPKTS ::::::::.:::::::::::::::::::.::::::::: .:::::::::::::::: : gi|149 IEQLQVSMTELKRAKLDLPEPGKEDEYPRKPLGQLPPEY--TNHLSNGQRSVGRPSPKIS 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA0 SRREDGSPRKNHEHSPVHHSRNGTPERAGQSRRKSVDEGSKNLKHEAESQRKPSPGMQDS ::::::::.: :::::.::::::::::.::::::::::::::::.::. ::::: : ::. gi|149 SRREDGSPHKAHEHSPAHHSRNGTPERVGQSRRKSVDEGSKNLKQEADFQRKPSSGTQDN 400 410 420 430 440 450 490 500 510 520 530 540 mKIAA0 SRHYNHAAANQNSNAISNVRKEFMPKWRKPSDASAIERTTKYAVEGKSHSALPALPVAIP :.:::::.:::::::.::.::::.:::::::.:::::::.:::.::.:::..::: ::.: gi|149 SKHYNHATANQNSNALSNIRKEFVPKWRKPSEASAIERTAKYAIEGRSHSVFPALSVAVP 460 470 480 490 500 510 550 560 570 580 590 600 mKIAA0 GSAETRLPNSRQKMKALDGGEGKRGSNASQYDNVPGGESEHGASAEEGPERTHPHSPRKH .:::::: ::::::::.:::::.:::::::::::::.::: ::::::::::::::::::: gi|149 SSAETRLSNSRQKMKAFDGGEGNRGSNASQYDNVPGSESEPGASAEEGPERTHPHSPRKH 520 530 540 550 560 570 610 620 630 640 650 660 mKIAA0 PEPSPSPPKVPNKFTFKVQPPSHVRYPPQLPEEDHRAAYPPSYSNPPVYHGNSPKHVPTA :::::: ::::::::::::::::::: : ::::::::::::::::::::::::.::: gi|149 SEPSPSPSKVPNKFTFKVQPPSHVRYPSQPAGEDHRAAYPPSYSNPPVYHGNSPKHIPTA 580 590 600 610 620 630 670 680 690 700 710 720 mKIAA0 HSGFVSTQISPRPQINPSRRPYGSSLSVDTSPEKAYSRPTPVVLPSSRIEVLPIDMGARG ::::.::::: ::.:::::::::::: ::::::.:.: ::: ::::::::::::.:::: gi|149 HSGFASTQISLGPQVNPSRRPYGSSLSGDTSPEKSYGRLTPV-LPSSRIEVLPIDIGARG 640 650 660 670 680 690 730 740 750 760 770 780 mKIAA0 YGSSGSPKNGQFILPPVDYLPENRKWSEVSYTYRPEMHGQSWTRDAHRSHLSNLPNYAAF ::::::::.:.::::::::::::::::: :::::::.::::::.:: ::::::::.:.:: gi|149 YGSSGSPKSGKFILPPVDYLPENRKWSEFSYTYRPEVHGQSWTQDATRSHLSNLPKYTAF 700 710 720 730 740 750 790 800 810 820 830 840 mKIAA0 QHIPFQAHGLPEVSVDSPVRYKMSAAVEDASPPGYPYAGPSPSAHHYRNGEGLSVQESVL :::.: ::::::::::::::: : :::.:::::::::::.:::::::: :::::::::: gi|149 PHIPLQDHGLPEVSVDSPVRYKTSPAVEEASPPGYPYAGPTPSAHHYRNREGLSVQESVL 760 770 780 790 800 810 mKIAA0 L : gi|149 L >>gi|148676036|gb|EDL07983.1| USP6 N-terminal like, isof (766 aa) initn: 4399 init1: 4399 opt: 4399 Z-score: 3934.2 bits: 738.8 E(): 2e-210 Smith-Waterman score: 5139; 93.529% identity (93.529% similar) in 819 aa overlap (23-841:1-766) 10 20 30 40 50 60 mKIAA0 ETLDSRSWFNTGLEQHPQRFAVMNSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDAD :::::::::::::::::::::::::::::::::::::: gi|148 MNSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDAD 10 20 30 70 80 90 100 110 120 mKIAA0 YLVYKVTDRFGFLHEEELPYHNAAADRQKQLEIERTSKWLKMLKKWERYKNTEKFHRRIY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 YLVYKVTDRFGFLHEEELPYHNAAADRQKQLEIERTSKWLKMLKKWERYKNTEKFHRRIY 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 KGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMF :::::::::::::::::::::::::::::: gi|148 KGIPLQLRGEVWALLLEIPKMKEETRDLYS------------------------------ 100 110 120 190 200 210 220 230 240 mKIAA0 RDRYGVKQQSLFHVLAAYSIYNTEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKH ::::::::::::::::::::::::::::::::::::: gi|148 -----------------------EVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKH 130 140 150 160 250 260 270 280 290 300 mKIAA0 AMHGFFVQGFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 AMHGFFVQGFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPF 170 180 190 200 210 220 310 320 330 340 350 360 mKIAA0 RLNLRIWDIYIFEGERVLTAMSYTILKLHKKHLMKLSMEELVEFLQETLAKDFFFEDDFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RLNLRIWDIYIFEGERVLTAMSYTILKLHKKHLMKLSMEELVEFLQETLAKDFFFEDDFV 230 240 250 260 270 280 370 380 390 400 410 420 mKIAA0 IEQLQVSMAELKRAKLDLPEPGKEDEYPKKPLGQLPPESACVNHLSNGQRSVGRPSPKTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 IEQLQVSMAELKRAKLDLPEPGKEDEYPKKPLGQLPPESACVNHLSNGQRSVGRPSPKTS 290 300 310 320 330 340 430 440 450 460 470 480 mKIAA0 SRREDGSPRKNHEHSPVHHSRNGTPERAGQSRRKSVDEGSKNLKHEAESQRKPSPGMQDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SRREDGSPRKNHEHSPVHHSRNGTPERAGQSRRKSVDEGSKNLKHEAESQRKPSPGMQDS 350 360 370 380 390 400 490 500 510 520 530 540 mKIAA0 SRHYNHAAANQNSNAISNVRKEFMPKWRKPSDASAIERTTKYAVEGKSHSALPALPVAIP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SRHYNHAAANQNSNAISNVRKEFMPKWRKPSDASAIERTTKYAVEGKSHSALPALPVAIP 410 420 430 440 450 460 550 560 570 580 590 600 mKIAA0 GSAETRLPNSRQKMKALDGGEGKRGSNASQYDNVPGGESEHGASAEEGPERTHPHSPRKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GSAETRLPNSRQKMKALDGGEGKRGSNASQYDNVPGGESEHGASAEEGPERTHPHSPRKH 470 480 490 500 510 520 610 620 630 640 650 660 mKIAA0 PEPSPSPPKVPNKFTFKVQPPSHVRYPPQLPEEDHRAAYPPSYSNPPVYHGNSPKHVPTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PEPSPSPPKVPNKFTFKVQPPSHVRYPPQLPEEDHRAAYPPSYSNPPVYHGNSPKHVPTA 530 540 550 560 570 580 670 680 690 700 710 720 mKIAA0 HSGFVSTQISPRPQINPSRRPYGSSLSVDTSPEKAYSRPTPVVLPSSRIEVLPIDMGARG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 HSGFVSTQISPRPQINPSRRPYGSSLSVDTSPEKAYSRPTPVVLPSSRIEVLPIDMGARG 590 600 610 620 630 640 730 740 750 760 770 780 mKIAA0 YGSSGSPKNGQFILPPVDYLPENRKWSEVSYTYRPEMHGQSWTRDAHRSHLSNLPNYAAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 YGSSGSPKNGQFILPPVDYLPENRKWSEVSYTYRPEMHGQSWTRDAHRSHLSNLPNYAAF 650 660 670 680 690 700 790 800 810 820 830 840 mKIAA0 QHIPFQAHGLPEVSVDSPVRYKMSAAVEDASPPGYPYAGPSPSAHHYRNGEGLSVQESVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 QHIPFQAHGLPEVSVDSPVRYKMSAAVEDASPPGYPYAGPSPSAHHYRNGEGLSVQESVL 710 720 730 740 750 760 mKIAA0 L : gi|148 L >>gi|73949154|ref|XP_544260.2| PREDICTED: similar to USP (839 aa) initn: 3693 init1: 2633 opt: 4332 Z-score: 3873.8 bits: 727.8 E(): 4.6e-207 Smith-Waterman score: 4431; 79.976% identity (90.350% similar) in 829 aa overlap (24-841:19-839) 10 20 30 40 50 60 mKIAA0 ETLDSRSWFNTGLEQHPQRFAVMNSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDAD .:::::::::::::::::::::::::::::::::::: gi|739 MRTEAAVNSQGRTNRLTKDSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDAD 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 YLVYKVTDRFGFLHEEELPYHNAAADRQKQLEIERTSKWLKMLKKWERYKNTEKFHRRIY :::::::::::::::::::::::: .::::::::::.::::::: ::.:::::::::::: gi|739 YLVYKVTDRFGFLHEEELPYHNAAMERQKQLEIERTTKWLKMLKGWEKYKNTEKFHRRIY 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 KGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMF :::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::: gi|739 KGIPLQLRGEVWALLLEIPKMKEETRDLYNKLKHRARGCSPDIRQIDLDVNRTFRDHIMF 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 RDRYGVKQQSLFHVLAAYSIYNTEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 RDRYGVKQQSLFHVLAAYSIYNTEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKH 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 AMHGFFVQGFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 AMHGFFVQGFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPF 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 RLNLRIWDIYIFEGERVLTAMSYTILKLHKKHLMKLSMEELVEFLQETLAKDFFFEDDFV ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 TLNLRIWDIYIFEGERVLTAMSYTILKLHKKHLMKLSMEELVEFLQETLAKDFFFEDDFV 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA0 IEQLQVSMAELKRAKLDLPEPGKEDEYPKKPLGQLPPESACVNHLSNGQRSVGRPSPKTS :::::.::.::::::::::::::::::::::::::::: : ..:::::.::::. ::. : gi|739 IEQLQISMVELKRAKLDLPEPGKEDEYPKKPLGQLPPEPASISHLSNGRRSVGKSSPHMS 360 370 380 390 400 410 430 440 450 460 470 mKIAA0 SRREDGS-PRKNHEHSPVHHSRNGTPERAGQSRRKSVDEGSKNLKHEAESQRKPSPGMQD ::::.:: :.:.:: :: :.:: :::::. .:::: :: :..::.::. ::: : :: gi|739 SRRESGSSPHKKHEPSPHHQSRIGTPERVRVQRRKSDDEDSRKLKEEADFQRKLPSGPQD 420 430 440 450 460 470 480 490 500 510 520 530 mKIAA0 SSRHYNHAAANQNSNAISNVRKEFMPKWRKPSDASAIERTTKYAVEGKSHSALPALPVAI ::..:::::::::::: ::.::::.::: :::: ::::.:.:::.::::.:. :.: :.: gi|739 SSKQYNHAAANQNSNATSNTRKEFVPKWNKPSDISAIEKTAKYAIEGKSRSVQPTLAVTI 480 490 500 510 520 530 540 550 560 570 580 590 mKIAA0 PGSAETRLPNSRQKMKALDGGEGKRGSNASQYDNVPGGESEHGASAEEGPERTH---P-- :.::.::. : :::::.::. ::::::::::::::: :....:: ::. ::.. : gi|739 PSSADTRISNVRQKMKVLDADEGKRGSNASQYDNVP--ENDNSASIEEALERAYSQSPRN 540 550 560 570 580 590 600 610 620 630 640 650 mKIAA0 ----HSPRKHPEPSPSPPKVPNKFTFKVQPPSHVRYPPQLPEEDHRAAYPPSYSNPPVYH :::::: ::. :: .::.:::::::: .. .:: : ::.:...::::::::::: gi|739 MVSSHSPRKHMEPGSSPSRVPTKFTFKVQPAGYPKYPSPLDGEDRRTVHPPSYSNPPVYH 600 610 620 630 640 650 660 670 680 690 700 710 mKIAA0 GNSPKHVPTAHSGFVSTQISPRPQINPSRRPYGSSLSVDTSPEKAYSRPTPVVLPSSRIE ::::::.:.:.:. .: :.. : :::::::::.::::.::::.:.:: :.:::::::: gi|739 GNSPKHIPSANSSCASPQFTHGAQRNPSRRPYGSTLSVDVSPEKSYGRPLPLVLPSSRIE 660 670 680 690 700 710 720 730 740 750 760 mKIAA0 VLPIDMGARGY-GSSGSPKNGQFILPPVDYLPENRKWSEVSYTYRPEMHGQSWTRDAHRS :::.: :: :: :.: :::::.::.:::::: ::: :::::: ::: ::.::.:. gi|739 VLPVDPGAGGYSGNSESPKNGKFIIPPVDYL------SEVIYTYRPETHGQLWTQDANRG 720 730 740 750 760 770 780 790 800 810 820 mKIAA0 HLSNLPNYAAFQHIPFQAHGLPEVSVDSPVRYKMSAAVEDASPPGYPYAGPSPSAHHYRN ::::::.:.::::. :: :.:: :::::::::. : ..:::: :: :.:::: ..:::: gi|739 HLSNLPKYSAFQHVSFQDHSLPAVSVDSPVRYRTSPGLEDASSSGYQYSGPSPPVYHYRN 770 780 790 800 810 820 830 840 mKIAA0 GEGLSVQESVLL .:::.:::::: gi|739 RDGLSIQESVLL 830 >>gi|194672393|ref|XP_608934.4| PREDICTED: similar to US (831 aa) initn: 3609 init1: 2464 opt: 4252 Z-score: 3802.4 bits: 714.6 E(): 4.3e-203 Smith-Waterman score: 4252; 76.755% identity (89.467% similar) in 826 aa overlap (24-841:19-831) 10 20 30 40 50 60 mKIAA0 ETLDSRSWFNTGLEQHPQRFAVMNSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDAD .:.:::::::::::::::::::::::::::::::::: gi|194 MRTEAVVNSQGQTGYLTKDSNQDVALKLAQERAEIVAKYDRGREGAEIEPWEDAD 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 YLVYKVTDRFGFLHEEELPYHNAAADRQKQLEIERTSKWLKMLKKWERYKNTEKFHRRIY :::::::::::::::::::::::: .:::.::::::.::::::: ::.:::::::::::: gi|194 YLVYKVTDRFGFLHEEELPYHNAAMERQKHLEIERTTKWLKMLKGWEKYKNTEKFHRRIY 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 KGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 KGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMF 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 RDRYGVKQQSLFHVLAAYSIYNTEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 RDRYGVKQQSLFHVLAAYSIYNTEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKH 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 AMHGFFVQGFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPF :::::::.:::::::::::::::::::::::::::::::.:::::::::::::::::::: gi|194 AMHGFFVHGFPKLLRFQEHHEKILNKFLSKLKQHLDSQEVYTSFYTMKWFFQCFLDRTPF 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA0 RLNLRIWDIYIFEGERVLTAMSYTILKLHKKHLMKLSMEELVEFLQETLAKDFFFEDDFV ::::::::::::::::::::::::::::.::::.::::::::::::::::::::::::: gi|194 TLNLRIWDIYIFEGERVLTAMSYTILKLHRKHLMRLSMEELVEFLQETLAKDFFFEDDFV 300 310 320 330 340 350 370 380 390 400 410 mKIAA0 IEQLQVSMAELKRAKLDLPEPGKEDEYPKKPLGQLPPE--SACVNHLSNGQRSVGRPSPK :::::.::::::::::::::::::::.::::::::::: :: :.::::::::::: ::. gi|194 IEQLQISMAELKRAKLDLPEPGKEDEFPKKPLGQLPPEGQSAGVTHLSNGQRSVGRSSPH 360 370 380 390 400 410 420 430 440 450 460 470 mKIAA0 TSSRREDGSPRKNHEHSPVHHSRNGTPERAGQSRRKSVDEGSKNLKHEAESQ----RKPS ..:: .:::.: :: :: : :.:::::: :.:::: :: .: :. ::..: :. gi|194 PGGRRGSGSPHKIHEPSPPHPRRTGTPERARQQRRKSSDEEGKRLRDEAQAQAQAQRRLP 420 430 440 450 460 470 480 490 500 510 520 530 mKIAA0 PGMQDSSRHYNHAAANQNSNAISNVRKEFMPKWRKPSDASAIERTTKYAVEGKSHSALPA :: ::.: .:::::::::::: : .:::: :.:.:::.:...:.:.: ::::.:..: :: gi|194 PGAQDGSGQYNHAAANQNSNATSRARKEFAPRWHKPSEAAVLEKTAKSAVEGRSRAAPPA 480 490 500 510 520 530 540 550 560 570 580 590 mKIAA0 LPVAIPGSAETRLPNSRQKMKALDGGEGKRGSNASQYDNVPGGESEHGASAEEGPERTHP : :. : :. ::: :.::. ::::::.:::::::: :. :...::. ::.. gi|194 L-------ADPRAPHVRQKTKVLDADEGKRGSTASQYDNVP--EDGPGGAVEEALERARA 540 550 560 570 580 600 610 620 630 640 650 mKIAA0 HSPRKHPEPSPSPPKVPNKFTFKVQPPSHVRYPPQLPE-EDHRAAYPPSYSNPPVYHGNS .:::. ::. :: ..: ::.::: : :....: ::. ::. :.::::::::.:.:.: gi|194 QSPRRPAEPGASPSRAPPKFAFKVLPSSYAQHPF-LPDGEDRGPAHPPSYSNPPTYQGSS 590 600 610 620 630 640 660 670 680 690 700 710 mKIAA0 PKHVPTAHSGFVSTQISPRPQINPSRRPYGSSLSVDTSPEKAYSRPTPVVLPSSRIEVLP ::.::.:.:.: . : . :::::::::.::...::::.::::::.: ::::::::: gi|194 PKRVPAANSSF---PFPPGAHTNPSRRPYGSTLSISASPEKSYSRPTPLVQPSSRIEVLP 650 660 670 680 690 700 720 730 740 750 760 770 mKIAA0 IDMGARGY-GSSGSPKNGQFILPPVDYLPENRKWSEVSYTYRPEMHGQSWTRDAHRSHLS .:.:: :: :.:::::::.::::: : ::.:::::::.::.::::::: ::::..:.::: gi|194 VDLGAGGYSGNSGSPKNGRFILPPGDCLPDNRKWSEVGYTWRPEMHGQPWTRDVNRGHLS 710 720 730 740 750 760 780 790 800 810 820 830 mKIAA0 NLPNYAAFQHIPFQAHGLPEVSVDSPVRYKMSAAVEDASPPGYPYAGPSPSAHHYRNGEG ..: . .:.: :.: :.:: ::::.::::. : :.:::. ::. :.:::: :.:::: .: gi|194 SFPRHPTFHHAPYQDHSLPSVSVDGPVRYRTSPALEDATSPGFQYSGPSPPAYHYRNRDG 770 780 790 800 810 820 840 mKIAA0 LSVQESVLL ::.:::::: gi|194 LSMQESVLL 830 >>gi|149021040|gb|EDL78647.1| USP6 N-terminal like (pred (763 aa) initn: 3111 init1: 1777 opt: 3908 Z-score: 3495.6 bits: 657.7 E(): 5.3e-186 Smith-Waterman score: 4633; 84.615% identity (89.866% similar) in 819 aa overlap (23-841:1-763) 10 20 30 40 50 60 mKIAA0 ETLDSRSWFNTGLEQHPQRFAVMNSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDAD :::::::::::::::::::::::::::::::::::::: gi|149 MNSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDAD 10 20 30 70 80 90 100 110 120 mKIAA0 YLVYKVTDRFGFLHEEELPYHNAAADRQKQLEIERTSKWLKMLKKWERYKNTEKFHRRIY :::::::::::::::::::: :::::::::::::::::::::::.::::::::::::::: gi|149 YLVYKVTDRFGFLHEEELPYPNAAADRQKQLEIERTSKWLKMLKRWERYKNTEKFHRRIY 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 KGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMF :::::::::::::::::::::::::::::: gi|149 KGIPLQLRGEVWALLLEIPKMKEETRDLYS------------------------------ 100 110 120 190 200 210 220 230 240 mKIAA0 RDRYGVKQQSLFHVLAAYSIYNTEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKH ::::::::::::::::::::::::::::::::::::: gi|149 -----------------------EVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKH 130 140 150 160 250 260 270 280 290 300 mKIAA0 AMHGFFVQGFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 AMHGFFVQGFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPF 170 180 190 200 210 220 310 320 330 340 350 360 mKIAA0 RLNLRIWDIYIFEGERVLTAMSYTILKLHKKHLMKLSMEELVEFLQETLAKDFFFEDDFV ::::::::::::::::.::::::::::::.:::::::::::::::::::::::::::::: gi|149 RLNLRIWDIYIFEGERILTAMSYTILKLHRKHLMKLSMEELVEFLQETLAKDFFFEDDFV 230 240 250 260 270 280 370 380 390 400 410 420 mKIAA0 IEQLQVSMAELKRAKLDLPEPGKEDEYPKKPLGQLPPESACVNHLSNGQRSVGRPSPKTS ::::::::.:::::::::::::::::::.::::::::: .:::::::::::::::: : gi|149 IEQLQVSMTELKRAKLDLPEPGKEDEYPRKPLGQLPPEY--TNHLSNGQRSVGRPSPKIS 290 300 310 320 330 340 430 440 450 460 470 480 mKIAA0 SRREDGSPRKNHEHSPVHHSRNGTPERAGQSRRKSVDEGSKNLKHEAESQRKPSPGMQDS ::::::::.: :::::.::::::::::.::::::::::::::::.::. ::::: : ::. gi|149 SRREDGSPHKAHEHSPAHHSRNGTPERVGQSRRKSVDEGSKNLKQEADFQRKPSSGTQDN 350 360 370 380 390 400 490 500 510 520 530 540 mKIAA0 SRHYNHAAANQNSNAISNVRKEFMPKWRKPSDASAIERTTKYAVEGKSHSALPALPVAIP :.:::::.:::::::.::.::::.:::::::.:::::::.:::.::.:::..::: ::.: gi|149 SKHYNHATANQNSNALSNIRKEFVPKWRKPSEASAIERTAKYAIEGRSHSVFPALSVAVP 410 420 430 440 450 460 550 560 570 580 590 600 mKIAA0 GSAETRLPNSRQKMKALDGGEGKRGSNASQYDNVPGGESEHGASAEEGPERTHPHSPRKH .:::::: ::::::::.:::::.:::::::::::::.::: ::::::::::::::::::: gi|149 SSAETRLSNSRQKMKAFDGGEGNRGSNASQYDNVPGSESEPGASAEEGPERTHPHSPRKH 470 480 490 500 510 520 610 620 630 640 650 660 mKIAA0 PEPSPSPPKVPNKFTFKVQPPSHVRYPPQLPEEDHRAAYPPSYSNPPVYHGNSPKHVPTA :::::: ::::::::::::::::::: : ::::::::::::::::::::::::.::: gi|149 SEPSPSPSKVPNKFTFKVQPPSHVRYPSQPAGEDHRAAYPPSYSNPPVYHGNSPKHIPTA 530 540 550 560 570 580 670 680 690 700 710 720 mKIAA0 HSGFVSTQISPRPQINPSRRPYGSSLSVDTSPEKAYSRPTPVVLPSSRIEVLPIDMGARG ::::.::::: ::.:::::::::::: ::::::.:.: ::: ::::::::::::.:::: gi|149 HSGFASTQISLGPQVNPSRRPYGSSLSGDTSPEKSYGRLTPV-LPSSRIEVLPIDIGARG 590 600 610 620 630 640 730 740 750 760 770 780 mKIAA0 YGSSGSPKNGQFILPPVDYLPENRKWSEVSYTYRPEMHGQSWTRDAHRSHLSNLPNYAAF ::::::::.:.::::::::::::::::: :::::::.::::::.:: ::::::::.:.:: gi|149 YGSSGSPKSGKFILPPVDYLPENRKWSEFSYTYRPEVHGQSWTQDATRSHLSNLPKYTAF 650 660 670 680 690 700 790 800 810 820 830 840 mKIAA0 QHIPFQAHGLPEVSVDSPVRYKMSAAVEDASPPGYPYAGPSPSAHHYRNGEGLSVQESVL :::.: ::::::::::::::: : :::.:::::::::::.:::::::: :::::::::: gi|149 PHIPLQDHGLPEVSVDSPVRYKTSPAVEEASPPGYPYAGPTPSAHHYRNREGLSVQESVL 710 720 730 740 750 760 mKIAA0 L : gi|149 L >>gi|50897492|sp|Q92738.3|US6NL_HUMAN RecName: Full=USP6 (828 aa) initn: 4323 init1: 2475 opt: 3369 Z-score: 3013.7 bits: 568.6 E(): 3.7e-159 Smith-Waterman score: 4562; 81.829% identity (90.614% similar) in 831 aa overlap (23-841:1-828) 10 20 30 40 50 60 mKIAA0 ETLDSRSWFNTGLEQHPQRFAVMNSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDAD :::::::::::::::::::::::::::::::::::::: gi|508 MNSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDAD 10 20 30 70 80 90 100 110 120 mKIAA0 YLVYKVTDRFGFLHEEELPYHNAAADRQKQLEIERTSKWLKMLKKWERYKNTEKFHRRIY ::::::::::::::::::: ::.:..:::.::::::.::::::: ::.:::::::::::: gi|508 YLVYKVTDRFGFLHEEELPDHNVAVERQKHLEIERTTKWLKMLKGWEKYKNTEKFHRRIY 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 KGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|508 KGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMF 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 RDRYGVKQQSLFHVLAAYSIYNTEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|508 RDRYGVKQQSLFHVLAAYSIYNTEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKH 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 AMHGFFVQGFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|508 AMHGFFVQGFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPF 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA0 RLNLRIWDIYIFEGERVLTAMSYTILKLHKKHLMKLSMEELVEFLQETLAKDFFFEDDFV :::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|508 TLNLRIWDIYIFEGERVLTAMSYTILKLHKKHLMKLSMEELVEFFQETLAKDFFFEDDFV 280 290 300 310 320 330 370 380 390 400 410 mKIAA0 IEQLQVSMAELKRAKLDLPEPGKEDEYPKKPLGQLPPE--SACVNHLSNGQRSVGRPSPK :::::.::.::::::::::::::::::::::::::::: : :.:::::::::::::: gi|508 IEQLQISMTELKRAKLDLPEPGKEDEYPKKPLGQLPPELQSWGVHHLSNGQRSVGRPSPL 340 350 360 370 380 390 420 430 440 450 460 470 mKIAA0 TSSRREDGSPRKNHEHSPVHHSRNGTPERAGQSRRKSVDEGSKNLKHEAESQRKPSPGMQ .:.:::.:.:.. ::::: .::.:::::: :::::.: ::.:: ::. ::: : : gi|508 ASGRRESGAPHRRHEHSPHPQSRTGTPERAQPPRRKSVEEESKKLKDEADFQRKLPSGPQ 400 410 420 430 440 450 480 490 500 510 520 530 mKIAA0 DSSRHYNHAAANQNSNAISNVRKEFMPKWRKPSDASAIERTTKYAVEGKSHSALPALPVA ::::.:::::::::::: ::.::::.::: ::::.:: :::.::..:::...: ::: :. gi|508 DSSRQYNHAAANQNSNATSNIRKEFVPKWNKPSDVSATERTAKYTMEGKGRAAHPALAVT 460 470 480 490 500 510 540 550 560 570 580 590 mKIAA0 IPGSAETRLPNSRQKMKALDGGEGKRGSNASQYDNVPGGESEHGASAEEGPERTH----- .:: ::.:. : : ::::::. .:::::.::::::::: : . :::.::. ::.. gi|508 VPGPAEVRVSNVRPKMKALDAEDGKRGSTASQYDNVPGPELDSGASVEEALERAYSQSPR 520 530 540 550 560 570 600 610 620 630 640 mKIAA0 ----PHSPRKHPEPSPSPPKVPNKFTFKVQPPSHVRYPPQLPEEDHRAAYPPSYSNPPVY : ::::: ::: :: :: ::::::::::::.::: :: : . :.:::::::::: gi|508 HALYPPSPRKHAEPSSSPSKVSNKFTFKVQPPSHARYPSQLDGEARGLAHPPSYSNPPVY 580 590 600 610 620 630 650 660 670 680 690 700 mKIAA0 HGNSPKHVPTAHSGFVSTQISPRPQINPSRRPYGSSLSVDTSPEKAYSRPTPVVLPSSRI ::::::: :::.:.:.: :.:: :.::::::.::.:::..::::.::::.:.::::::: gi|508 HGNSPKHFPTANSSFASPQFSPGTQLNPSRRPHGSTLSVSASPEKSYSRPSPLVLPSSRI 640 650 660 670 680 690 710 720 730 740 750 760 mKIAA0 EVLPIDMGARGY-GSSGSPKNGQFILPPVDYLPENRKWSEVSYTYRPEMHGQSWTRDAHR ::::.: :: :: :.:::::::..:.:::::::.:: ::::::::::: .:::::::: : gi|508 EVLPVDTGAGGYSGNSGSPKNGKLIIPPVDYLPDNRTWSEVSYTYRPETQGQSWTRDASR 700 710 720 730 740 750 770 780 790 800 810 820 mKIAA0 SHLSNLPNYAAFQHIPFQAHGLPEVSVDSPVRYKMSAAVEDASPPGYPYAGPSPSAHHYR . :::.:.::: ::: :::: :::::::::: : :.::::: ::::.:: : :.::: gi|508 G---NLPKYSAFQLAPFQDHGLPAVSVDSPVRYKASPAAEDASPSGYPYSGPPPPAYHYR 760 770 780 790 800 810 830 840 mKIAA0 NGEGLSVQESVLL : .:::.:::::: gi|508 NRDGLSIQESVLL 820 >>gi|158259349|dbj|BAF85633.1| unnamed protein product [ (828 aa) initn: 4319 init1: 2475 opt: 3369 Z-score: 3013.7 bits: 568.6 E(): 3.7e-159 Smith-Waterman score: 4558; 81.709% identity (90.614% similar) in 831 aa overlap (23-841:1-828) 10 20 30 40 50 60 mKIAA0 ETLDSRSWFNTGLEQHPQRFAVMNSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDAD :::::::::::::::::::::::::::::::::::::: gi|158 MNSDQDVALKLAQERAEIVAKYDRGREGAEIEPWEDAD 10 20 30 70 80 90 100 110 120 mKIAA0 YLVYKVTDRFGFLHEEELPYHNAAADRQKQLEIERTSKWLKMLKKWERYKNTEKFHRRIY ::::::::::::::::::: ::.:..:::.::::::.::::::: ::.:::::::::::: gi|158 YLVYKVTDRFGFLHEEELPDHNVAVERQKHLEIERTTKWLKMLKGWEKYKNTEKFHRRIY 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 KGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 KGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKHRARGCSPDIRQIDLDVNRTFRDHIMF 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 RDRYGVKQQSLFHVLAAYSIYNTEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 RDRYGVKQQSLFHVLAAYSIYNTEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPKH 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 AMHGFFVQGFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 AMHGFFVQGFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSFYTMKWFFQCFLDRTPF 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA0 RLNLRIWDIYIFEGERVLTAMSYTILKLHKKHLMKLSMEELVEFLQETLAKDFFFEDDFV :::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|158 TLNLRIWDIYIFEGERVLTAMSYTILKLHKKHLMKLSMEELVEFFQETLAKDFFFEDDFV 280 290 300 310 320 330 370 380 390 400 410 mKIAA0 IEQLQVSMAELKRAKLDLPEPGKEDEYPKKPLGQLPPE--SACVNHLSNGQRSVGRPSPK :::::.::.::::::::::::::::::::::::::::: : :.:::::::::::::: gi|158 IEQLQISMTELKRAKLDLPEPGKEDEYPKKPLGQLPPELQSWGVHHLSNGQRSVGRPSPL 340 350 360 370 380 390 420 430 440 450 460 470 mKIAA0 TSSRREDGSPRKNHEHSPVHHSRNGTPERAGQSRRKSVDEGSKNLKHEAESQRKPSPGMQ .:.:::.:.:.. ::::: .::.:::::: :::::.: ::.:: ::. ::: : : gi|158 ASGRRESGAPHRRHEHSPHPQSRTGTPERAQPPRRKSVEEESKKLKDEADFQRKLPSGPQ 400 410 420 430 440 450 480 490 500 510 520 530 mKIAA0 DSSRHYNHAAANQNSNAISNVRKEFMPKWRKPSDASAIERTTKYAVEGKSHSALPALPVA ::::.:::::::::::: ::.::::.::: ::::.:: :::.::..:::...: ::: :. gi|158 DSSRQYNHAAANQNSNATSNIRKEFVPKWNKPSDVSATERTAKYTMEGKGRAAHPALAVT 460 470 480 490 500 510 540 550 560 570 580 590 mKIAA0 IPGSAETRLPNSRQKMKALDGGEGKRGSNASQYDNVPGGESEHGASAEEGPERTH----- .:: ::.:. : : ::::::. .:::::.::::::::: : . :::.::. ::.. gi|158 VPGPAEVRVSNVRPKMKALDAEDGKRGSTASQYDNVPGPELDSGASVEEALERAYSQSPR 520 530 540 550 560 570 600 610 620 630 640 mKIAA0 ----PHSPRKHPEPSPSPPKVPNKFTFKVQPPSHVRYPPQLPEEDHRAAYPPSYSNPPVY : ::::: ::: :: :: ::::::::::::.::: :: . . :.:::::::::: gi|158 HALYPPSPRKHAEPSSSPSKVSNKFTFKVQPPSHARYPSQLDGDARGLAHPPSYSNPPVY 580 590 600 610 620 630 650 660 670 680 690 700 mKIAA0 HGNSPKHVPTAHSGFVSTQISPRPQINPSRRPYGSSLSVDTSPEKAYSRPTPVVLPSSRI ::::::: :::.:.:.: :.:: :.::::::.::.:::..::::.::::.:.::::::: gi|158 HGNSPKHFPTANSSFASPQFSPGTQLNPSRRPHGSTLSVSASPEKSYSRPSPLVLPSSRI 640 650 660 670 680 690 710 720 730 740 750 760 mKIAA0 EVLPIDMGARGY-GSSGSPKNGQFILPPVDYLPENRKWSEVSYTYRPEMHGQSWTRDAHR ::::.: :: :: :.:::::::..:.:::::::.:: ::::::::::: .:::::::: : gi|158 EVLPVDTGAGGYSGNSGSPKNGKLIIPPVDYLPDNRTWSEVSYTYRPETQGQSWTRDASR 700 710 720 730 740 750 770 780 790 800 810 820 mKIAA0 SHLSNLPNYAAFQHIPFQAHGLPEVSVDSPVRYKMSAAVEDASPPGYPYAGPSPSAHHYR . :::.:.::: ::: :::: :::::::::: : :.::::: ::::.:: : :.::: gi|158 G---NLPKYSAFQLAPFQDHGLPAVSVDSPVRYKASPAAEDASPSGYPYSGPPPPAYHYR 760 770 780 790 800 810 830 840 mKIAA0 NGEGLSVQESVLL : .:::.:::::: gi|158 NRDGLSIQESVLL 820 841 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Thu Mar 12 12:29:30 2009 done: Thu Mar 12 12:37:55 2009 Total Scan time: 1107.780 Total Display time: 0.400 Function used was FASTA [version 34.26.5 April 26, 2007]