Comparison of KIAA cDNA sequences between mouse and human (FLJ00377)
<<Original sequence data>>
mouse mFLJ00377 (mpm12243) length: 4600 bp, CDS: 253 - 933
human (sh08074) length: 5642 bp, CDS: 2807 - 3379
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 282 - 2918 659 438 39.9
CDS: 2919 - 1624 0 0 0.0
3'UTR: 1625 - 6784 1683 1002 37.3
amino acid
CDS: 2919 - 1624 0 0 0.0
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
mpm12243 1 .................................................. 1
sh08074 1 GAAAATCCTCACGTGAGGTGAAGCGCAGGCGAGTGGGGCCGGACATGGTG 50
51 ----+----*----+----*----+----*----+----*----+----* 100
mpm12243 1 .................................................. 1
sh08074 51 GCTCATGCCTGTGATCTCAGCACTTTGGGAGACTGAGATGAGAAGATCAC 100
101 ----+----*----+----*----+----*----+----*----+----* 150
mpm12243 1 .................................................. 1
sh08074 101 TTGAGGCCAGGAGTTCGAGACCAGACTGGCAACATAGTGAGACCCTGTCT 150
151 ----+----*----+----*----+----*----+----*----+----* 200
mpm12243 1 .................................................. 1
sh08074 151 CTACAAAATGCTGGCCAAGGAGCAGGGCCTGCGCCCGTGGTCTCATAGAG 200
201 ----+----*----+----*----+----*----+----*----+----* 250
mpm12243 1 .................................................. 1
sh08074 201 CCTGGCCTGTTCTGGAAGAGCACCCAGTTGTTCCTTCTAGGCTGCCCAAG 250
251 ----+----*----+----*----+----*----+----*----+----* 300
mpm12243 1 ...............................GGAGGATTCTGAG...GCT 16
|| || ||||| ||
sh08074 251 CCCCACTGATGATGGCTGAGAGGGAAGAGGACGACGACACTGAGGAAGCC 300
301 ----+----*----+----*----+----*----+----*----+----* 350
mpm12243 17 TGGCTGCGGTTGAAGCCTGTGGAGCCCTTGCCCTCCCAGTGCTGCGGCAG 66
||| ||| | | ||| || |||||||| |||||||||||||||||
sh08074 301 TGGATGCAGCTACGGCCCACAGAACCCTTGCCTTCCCAGTGCTGCGGCAG 350
351 ----+----*----+----*----+----*----+----*----+----* 400
mpm12243 67 TGGCTGCTCGCCCTGTGTTTTTGACCTCTACTACCGAGACCTGGAAAGAT 116
||||||||| |||||||| ||||||||||| ||||||| |||| ||| |
sh08074 351 TGGCTGCTCACCCTGTGTGTTTGACCTCTATCACCGAGATCTGGCAAGGT 400
401 ----+----*----+----*----+----*----+----*----+----* 450
mpm12243 117 GGGAAACAGCCCGAGCCAGAAATGACAGGAGCCTGCTGAGTGGGAAGCAA 166
|||| |||||| |||||| || ||||||||||||||| ||||| |
sh08074 401 GGGAGGCAGCCCAAGCCAGCAAGGACAGGAGCCTGCTGCGTGGGCCAGAG 450
451 ----+----*----+----*----+----*----+----*----+----* 500
mpm12243 167 CCACCTGAGAGCCAGATATCCATTGAATACCTGTTATACACCAGGCCCTA 216
|||
sh08074 451 TCAC.............................................. 454
501 ----+----*----+----*----+----*----+----*----+----* 550
mpm12243 217 TAAGCCAATGAGGATTTGTGAGTGAGCAAGGCATAGTCCTTGCCCTCAAA 266
sh08074 455 .................................................. 455
551 ----+----*----+----*----+----*----+----*----+----* 600
mpm12243 267 AGAGCACACTAACTTGAGCTGTTCTGCCAAGCTGAGTCCAGAGACTTTCC 316
|||||| | ||||||||| |||||||| |||
sh08074 455 ..............AGAGCTGCCCCTCCAAGCTGAACCCAGAGACCTTCG 490
601 ----+----*----+----*----+----*----+----*----+----* 650
mpm12243 317 TGGCCTTCCACATCAGCACCATGGAGAAGGTCACCAAGGACACCTATCTT 366
|||||||| ||||| ||||||| | | |||| ||||||||||| | |
sh08074 491 TGGCCTTCTGCATCATTGCCATGGACAGGCTCACTAAGGACACCTACCGT 540
651 ----+----*----+----*----+----*----+----*----+----* 700
mpm12243 367 GTCCGGTTTACACTACCCGGGAACAGTCGGCTCGGCCTGCGTCCTGGACA 416
||||||||| | |||||||||||||| | ||| |||||||| || || ||
sh08074 541 GTCCGGTTTGCTCTACCCGGGAACAGCCAGCTTGGCCTGCGGCCCGGCCA 590
701 ----+----*----+----*----+----*----+----*----+----* 750
mpm12243 417 GCACCTCATCCTAC.................................... 430
||||||||||||||
sh08074 591 GCACCTCATCCTACGGTACACTCAGGCTGGTCTCGAACTCCTGACCTCAA 640
751 ----+----*----+----*----+----*----+----*----+----* 800
mpm12243 431 .................................................. 431
sh08074 641 GTGATCAGCCCACCTCGGCCTCCCAAGGTGTGGGGATTACAGACATGAGC 690
801 ----+----*----+----*----+----*----+----*----+----* 850
mpm12243 431 .................................................. 431
sh08074 691 CACCGTGCCCAGCCTTAAAAGGGTTTGCTGAATGACTGGCTGACTGACTG 740
851 ----+----*----+----*----+----*----+----*----+----* 900
mpm12243 431 .................GAGGTGTAGTAGATGGCTTAGAGATTCAGAGAG 463
|||| ||||||||| |||||| ||||||||||
sh08074 741 CACACTTCTGTTTCTCAGAGGGATAGTAGATGACTTAGAAATTCAGAGAG 790
901 ----+----*----+----*----+----*----+----*----+----* 950
mpm12243 464 CCTACACTCCCATCAGCCCTGTCACTGCAGAAGGATACTTTGACGTTTTA 513
|||| || ||||||||||||| || ||||||||||||||||| || |||
sh08074 791 CCTATACGCCCATCAGCCCTGCCAACGCAGAAGGATACTTTGAAGTGTTA 840
951 ----+----*----+----*----+----*----+----*----+----* 1000
mpm12243 514 ATCAAGTGCTACCGGACTGGGCTGA......................... 538
|| ||| | ||| |
sh08074 841 ATTAAGATGAAGAAACTGAAGCTCAAAAAGATGACATCATTTGTCTCAAG 890
1001 ----+----*----+----*----+----*----+----*----+----* 1050
mpm12243 539 .................................................. 539
sh08074 891 GCCTCTTGGGTAATATGATCCAAATGGAAGGACAAAAGTTCAGTGTCAGT 940
1051 ----+----*----+----*----+----*----+----*----+----* 1100
mpm12243 539 .................................TGTCCCAG..TATGTGG 553
||| |||| | ||||
sh08074 941 TCTGTTTAACAAGTATGTATTAAACATTTACTCTGTGCCAGGCTCTGTGT 990
1101 ----+----*----+----*----+----*----+----*----+----* 1150
mpm12243 554 AGTCATGGAGAACAGGAGACACAGCCTTCTGGCGAGGGC...CTTTCGGA 600
| ||| | | || || ||| ||| | | | | |
sh08074 991 GGGTATGTATTAGTCCGTTTTCACGCTGCTGATAAGGACATACCTGAGAA 1040
1151 ----+----*----+----*----+----*----+----*----+----* 1200
mpm12243 601 AGCTTCTTATATGAACCAAAGAAGTACGGCGAGCTCCTCATGCTAGCGGC 650
| | |||||| |||| || | ||| | | | |
sh08074 1041 TGGGCAATTTATGAAAGAAAGGGGTTTAATGGACTCACAGTTCCACATGG 1090
1201 ----+----*----+----*----+----*----+----*----+----* 1250
mpm12243 651 TGGCACAGGCCTGGCCCCCATGGTGCCAATCCTGCAGAGCATCACA...G 697
| |||||| | ||||| | | ||| || |
sh08074 1091 CTGGGGAGGCCTCACAATCATGGCAGAAGGTGAAAGGCATATCTCACATG 1140
1251 ----+----*----+----*----+----*----+----*----+----* 1300
mpm12243 698 ACGACGAAGATGATGAGACCTT.TGTCACCTTGGTCGGCTGCTTCAAGAC 746
|| | | | || |||| ||| || || || | || |
sh08074 1141 GCGGCAGACAAGAAGAGAGCTTGTGCGGGGAAACTCTTCTTTGTAAAACC 1190
1301 ----+----*----+----*----+----*----+----*----+----* 1350
mpm12243 747 CTTCGAGGGCATCTACCTGAAGACCTTCTTCCAGGAACAGGCCAGGTTCT 796
| || ||| || | | | | || |||||| ||
sh08074 1191 ATCAGATCTCATGAGACT.TATTCACTATCACAAGAACAGCATGGGAAAG 1239
1351 ----+----*----+----*----+----*----+----*----+----* 1400
mpm12243 797 GGAACGTGCAAACCTTCTTTGTCCTC........................ 822
| | ||| || ||||
sh08074 1240 ACCTGCCCCCATGATTCATTTACCTCCCACTGGGTCCCTCCCACAACACA 1289
1401 ----+----*----+----*----+----*----+----*----+----* 1450
mpm12243 823 .................................................. 823
sh08074 1290 TGGGAATTCAAGATGAGATTTGGGTGGGGACACAGCCAAACCATATCAGG 1339
1451 ----+----*----+----*----+----*----+----*----+----* 1500
mpm12243 823 .................................................. 823
sh08074 1340 GTACTAAAGACAACATGGAAGAATCCTTCCCTTCTTCTTGGGTGCTGTCA 1389
1501 ----+----*----+----*----+----*----+----*----+----* 1550
mpm12243 823 .............AGTCAGGCCTCCCCAAGTCCATCATACAGAGGAGGAA 859
|||| |||||||| | |||| | ||
sh08074 1390 AGGCCACAGCTGGGGTCATGCCTCCCCCTAGATAGGGGCCAGAAAACAAA 1439
1551 ----+----*----+----*----+----*----+----*----+----* 1600
mpm12243 860 GCAGGCTTACAGAGGTGCTGGACCAAGGGGGAGCCAGGACTGGGCCTGTA 909
|| || | ||| || | ||||| | | || ||| |
sh08074 1440 GCGTGCATGGAGACAGCCTCCAGCAAGGCAGGAGAAAAACCTCACCTTTC 1489
1601 ----+----*----+----*----+----*----+----*----+----* 1650
mpm12243 910 TGCCTCACACTCCTGAGCTTGTAGCTGCTGCCTTCAGCTG.......... 949
|| | || ||| | ||| | |||| | ||
sh08074 1490 CTACT.AGACCCCTTCCAGTTGAGCCAGGGACTTCCGTTGCCTTGTGCAG 1538
1651 ----+----*----+----*----+----*----+----*----+----* 1700
mpm12243 950 .................................................. 950
sh08074 1539 GTGGTGCCCAAGGAAGTCAGGGATGATATCAGAGATGGCCATGGGTGCTT 1588
1701 ----+----*----+----*----+----*----+----*----+----* 1750
mpm12243 950 .................................................. 950
sh08074 1589 AAAAACAGGTCTGGGGACCAAAGCCCTTTCTCTGTGTTAAGCCTGGCTAT 1638
1751 ----+----*----+----*----+----*----+----*----+----* 1800
mpm12243 950 .................................................. 950
sh08074 1639 AATCTTACTCCAAACACCCTTCCAGTCCTGTCTCCCAGTGCTTCGCCCTC 1688
1801 ----+----*----+----*----+----*----+----*----+----* 1850
mpm12243 950 .................................................T 950
|
sh08074 1689 ACCCTCACCCTACCATGTTCACTTGCTATTCCCAAAACATGACCCAGATT 1738
1851 ----+----*----+----*----+----*----+----*----+----* 1900
mpm12243 951 GTCCCATCCATCCCCTGCGATCACTTGTGTGGAGTCAAAGCATCAGCAGT 1000
|||| | || | || ||| || || |||
sh08074 1739 GTCCTACCCCTGACCATACTACACCTGATGTCCAGAGTCCTCTCTGCACC 1788
1901 ----+----*----+----*----+----*----+----*----+----* 1950
mpm12243 1001 CCTGTTCACACCGTCACGGCTAAGAATGTGGGCTCACATACGCCATAGGG 1050
|||| || || | || | || | | | | | | |
sh08074 1789 CCTGCTCCCATCCCCAGTGAATTCCATCTTGCCCATCTTTCAAGGTCCAA 1838
1951 ----+----*----+----*----+----*----+----*----+----* 2000
mpm12243 1051 CCCA.........................................GCATG 1059
| || | | |
sh08074 1839 CTCAAATGCTTCCTCCCCCAGGAAGCCATCCTCGATCCCATCCATGGAAG 1888
2001 ----+----*----+----*----+----*----+----*----+----* 2050
mpm12243 1060 AGGCTGGGGCCTGAGCAAG.................GGCTTCATGGAGAC 1092
||||| |||| || | |||||| |
sh08074 1889 TGGCTGCAGCCTTCTCAGGTTTATTCCTAGTTTATTCTTCTCATGGGTAT 1938
2051 ----+----*----+----*----+----*----+----*----+----* 2100
mpm12243 1093 TGGCTGGGCAGTGCCTTAGTGAGGTC........................ 1118
| | ||| | | |||| | |||
sh08074 1939 TAGATGGTCTCTACCTTGTATATGTCTGAGACTTAGGTCCCTTCTAGATT 1988
2101 ----+----*----+----*----+----*----+----*----+----* 2150
mpm12243 1119 .................................................. 1119
sh08074 1989 GTAAGCTCCTTAAGGGGAGAGCCTGAATCTGGATTGATTGATTGATTCAT 2038
2151 ----+----*----+----*----+----*----+----*----+----* 2200
mpm12243 1119 .................................................. 1119
sh08074 2039 TCATTCAGGTATTTATTAAGTTACTTCCATGGTTCAGGCACTGGCTGCCT 2088
2201 ----+----*----+----*----+----*----+----*----+----* 2250
mpm12243 1119 ............................CCTGCCACCTCCACCTGTTCCT 1140
||||| |||| || ||| |||
sh08074 2089 TCATGGAGCTTAAGATCTAGCTGTCTTGCCTGCATCCTCAACATGTGCCT 2138
2251 ----+----*----+----*----+----*----+----*----+----* 2300
mpm12243 1141 .................................................. 1141
sh08074 2139 GGCACAGAGTGGACAGGCACCCAGGCAATATAGACTCCCTTCTCCATGGA 2188
2301 ----+----*----+----*----+----*----+----*----+----* 2350
mpm12243 1141 .................................................. 1141
sh08074 2189 GGAATCACTTCTGTAACCTTCATTTTTCATCCAGCCAGGAGATGGTGTAG 2238
2351 ----+----*----+----*----+----*----+----*----+----* 2400
mpm12243 1141 .................................................. 1141
sh08074 2239 GATAATGCAGAGACTGCAGATGGGTGGCCTGAATCTAGCCCATAGATGTA 2288
2401 ----+----*----+----*----+----*----+----*----+----* 2450
mpm12243 1141 .................................................. 1141
sh08074 2289 TTTGGTATTGGCCAGCATAGAGTTTTAAAATTTTGAATTAATTGCAGACA 2338
2451 ----+----*----+----*----+----*----+----*----+----* 2500
mpm12243 1141 .................................................. 1141
sh08074 2339 TTTCAAAAATGGGAGATTTTAAATAAAAATATGGATTTCGTGCCTCTTTT 2388
2501 ----+----*----+----*----+----*----+----*----+----* 2550
mpm12243 1141 .................................................. 1141
sh08074 2389 GGAAAATCAATAGATTTGGCCAATTAGGCCCCACAAACTATGGACTGAAA 2438
2551 ----+----*----+----*----+----*----+----*----+----* 2600
mpm12243 1141 .................................................. 1141
sh08074 2439 CCTGCAAACTGGCTTCCCTCCTTAGAAGGAGCACTCGCTCACCAATTTAT 2488
2601 ----+----*----+----*----+----*----+----*----+----* 2650
mpm12243 1141 .................................................. 1141
sh08074 2489 CATAGTCCCCATCACTCCCTATTGTCTCCCTGATGCTGAGACTGTGTGTT 2538
2651 ----+----*----+----*----+----*----+----*----+----* 2700
mpm12243 1141 .................................................. 1141
sh08074 2539 AATTGCCATTAATCATCACCCAGTTCTTCACTCATTTATGGTACCTGCAT 2588
2701 ----+----*----+----*----+----*----+----*----+----* 2750
mpm12243 1141 .................................................. 1141
sh08074 2589 GGTCCCTGTGGGCATTTGGGTTTGGGACCTCTATGCTGAAGGCTTTAGGT 2638
2751 ----+----*----+----*----+----*----+----*----+----* 2800
mpm12243 1141 .................................................. 1141
sh08074 2639 CCTATGGATTCTCATCCCAGCCTCCTGTCTGCCTTCTGTGTAAGCTTCTG 2688
2801 ----+----*----+----*----+----*----+----*----+----* 2850
mpm12243 1141 .................................................. 1141
sh08074 2689 GGCCTCATCTGAAAATTGGGAATGGCTGTACCAACTTTGTAGGATAAGGA 2738
2851 ----+----*----+----*----+----*----+----*----+----* 2900
mpm12243 1141 ...........CCACACAGCTGCAGAACAGCTACTGTCAGACTCAACGAG 1179
| | | | | ||| | || || |||| |
sh08074 2739 GGACGATTAAATGAGATAACACATGTGAAGCACTTAGCATACAGAACGGG 2788
2901 ----+----*----+----*----+----*----+----*----+----* 2950
mpm12243 1180 CTTGGCAGAAAAG..................................... 1192
|| || || |
sh08074 2789 CTCCACATTAATGGTTAATCTGGTTTGTGTTGGCAGCATGTACCTGTCCC 2838
S G L C W Q H V P V P
2951 ----+----*----+----*----+----*----+----*----+----* 3000
mpm12243 1193 .................................................. 1193
sh08074 2839 GCTGACGTCTCCCTGTGTTTGCTTCCAGTGCTACCAGATGGGGCTGATGT 2888
L T S P C V C F Q C Y Q M G L M S
3001 ----+----*----+----*----+----*----+----*----+----* 3050
mpm12243 1193 .................................................. 1193
sh08074 2889 CCCGGTATGTTGAGTCCTGGAGAGTAGGAGACACAGCTTTCTGGCGAGGA 2938
R Y V E S W R V G D T A F W R G
3051 ----+----*----+----*----+----*----+----*----+----* 3100
mpm12243 1193 .................................................A 1193
sh08074 2939 CCTTTCGGAGATTTCTTCTATAAACCAAACCAGTATGGTGAGCTCCTCTT 2988
P F G D F F Y K P N Q Y G E L L L
3101 ----+----*----+----*----+----*----+----*----+----* 3150
L A R * T S G T P -
mpm12243 1194 GCTGGCTAGGTGAACGTCTGGAACCCCCA..................... 1222
||||||| | | ||| ||||||
sh08074 2989 GCTGGCTGCGGGCACGGGCCTGGCCCCCATGGTGCCTATCCTGCAGAGCA 3038
L A A G T G L A P M V P I L Q S I
3151 ----+----*----+----*----+----*----+----*----+----* 3200
mpm12243 1223 .................................................. 1223
sh08074 3039 TCACAGACAATGAGAATGACGAGACTTTTGTCACTCTGGTCGGTTGCTTC 3088
T D N E N D E T F V T L V G C F
3201 ----+----*----+----*----+----*----+----*----+----* 3250
mpm12243 1223 .................................................. 1223
sh08074 3089 AAGACCTTTGAGAGCATCTACCTGAAAACCTTCCTCCAAGAGCAGGCCCG 3138
K T F E S I Y L K T F L Q E Q A R
3251 ----+----*----+----*----+----*----+----*----+----* 3300
S H R C S L L S S Q E V S P E
mpm12243 1223 .....GGAGTCATCGCTGCTCTCTCCTGTCTTCCCAGGAGGTCTCCCCAG 1267
||| | || || | | ||||||| |||| |||
sh08074 3139 TTTCTGGAATGTCCGTACCTTCTTTGTACTCAGCCAGGAGAGCTCCTCAG 3188
F W N V R T F F V L S Q E S S S E
3301 ----+----*----+----*----+----*----+----*----+----* 3350
Q L P W S Y R D K T H F G R L G
mpm12243 1268 AACAGCTTCCCTGGAGCTACCGTGACAAGACCCATTTTGGCCGCCTGGGC 1317
| |||||||||||||| |||| || || ||||| ||||||| |||||||
sh08074 3189 AGCAGCTTCCCTGGAGTTACCAAGAGAAAACCCACTTTGGCCACCTGGGC 3238
Q L P W S Y Q E K T H F G H L G
3351 ----+----*----+----*----+----*----+----*----+----* 3400
Q E L V A E L V A C C R R K P F T
mpm12243 1318 CAGGAGCTGGTTGCTGAACTGGTGGCCTGCTGCCGGAGAAAGCCGTTTAC 1367
||||| || || || ||||| |||||| ||||||||||| || |
sh08074 3239 CAGGACCTAATTAAAGAGCTGGTCAGCTGCTGTCGGAGAAAGCCATTCGC 3288
Q D L I K E L V S C C R R K P F A
3401 ----+----*----+----*----+----*----+----*----+----* 3450
L V C G S P A F N E D M A R C L L
mpm12243 1368 CTTAGTCTGTGGCTCACCTGCATTTAATGAGGACATGGCTAGGTGTTTGC 1417
| ||||||||||| ||| || | | ||||| || ||||| || |
sh08074 3289 ACTGGTCTGTGGCTCGGCTGAGTTCACCAAAGACATAGCCAGGTGCTTAC 3338
L V C G S A E F T K D I A R C L L
3451 ----+----*----+----*----+----*----+----*----+----* 3500
S A G L T E D S Y F L F *
mpm12243 1418 TGTCTGCTGGCCTGACTGAGGACTCCTACTTCCTCTTCTAGCCCTGGCCT 1467
||| || ||||| |||||||||||||| |||||||||||||||||||||
sh08074 3339 TGTGCGCAGGCCTCACTGAGGACTCCTATTTCCTCTTCTAGCCCTGGCCT 3388
C A G L T E D S Y F L F *
3501 ----+----*----+----*----+----*----+----*----+----* 3550
mpm12243 1468 ....................TGGGCCTTAATCAGGGGTACAGAGAGGAGC 1497
|| |||| | ||| ||| ||||||
sh08074 3389 CTCTTCCAAAGCCTAGGCCATGAGCCTGCTACTGGGACCCAGGAAGGAGC 3438
3551 ----+----*----+----*----+----*----+----*----+----* 3600
mpm12243 1498 CCAGATCAGAGTCAGAAGACATGGAGTCCAGGCCTGGCCCTGCTGCTGAC 1547
|||| || |||||||||| ||||||||||||||| ||||||||| |
sh08074 3439 ACAGACTGGAATCAGAAGACACGGAGTCCAGGCCTGGTCCTGCTGCTCAT 3488
3601 ----+----*----+----*----+----*----+----*----+----* 3650
mpm12243 1548 TTACCCAGAGACCTTGGGCAAATGTCATCACCATGGAACTTCCCTTCCTG 1597
|| || | |||||||||||| |||| | || | | || | |
sh08074 3489 TTGCCAGGTGACCTTGGGCAAGTGTCTTTACTGCTCAGAACCTCTACTTC 3538
3651 ----+----*----+----*----+----*----+----*----+----* 3700
mpm12243 1598 TCTGCT...........................GCGTCCTGCTGTATGGA 1620
|| || || |||| || | | ||
sh08074 3539 TCATCTGCCCCATGAGGTTAATCACTCCTCCTGGCCTCCTACTATGTAGA 3588
3701 ----+----*----+----*----+----*----+----*----+----* 3750
mpm12243 1621 GGGAGGCCAG..........................CAGTTGTCAGGGAG 1644
||||| | | | | |||||
sh08074 3589 AGGAGGATGGGCTGTAGGGGCCCTGAGGAGGTGAGCAACCAGCCTGGGAG 3638
3751 ----+----*----+----*----+----*----+----*----+----* 3800
mpm12243 1645 TCAGGGAAGACTGCTCCAAGGGAGCCAAG..CAAGTGGAGTCCTACTGAG 1692
||||||| |||| || ||| ||||||| || | ||| || |
sh08074 3639 TCAGGGAGGACTCTTCAGAGGAAGCCAAGTCCAGGCTGAGCCCCA..... 3683
3801 ----+----*----+----*----+----*----+----*----+----* 3850
mpm12243 1693 CTCAGGCTGGTGGGGGTTGGGTAGGACAAG....GGGTGAGGAGTCTCTT 1738
| || || |||||| ||| ||| ||| | | || ||
sh08074 3684 ...GGAGGAGTAGGAGTTGGGCAGGGGAAGAGTCGGGAGGAGCTTCCCTG 3730
3851 ----+----*----+----*----+----*----+----*----+----* 3900
mpm12243 1739 GTCCTCCC.......................................... 1746
| || ||
sh08074 3731 GCCCCTCCGATTAGAGGATCTAATGGGGGCTCCAACTGTGGCCTCAGCAC 3780
3901 ----+----*----+----*----+----*----+----*----+----* 3950
mpm12243 1747 ............AGAGCCCATCAGTGCTGGGAAAATGACTTGGG.GAAGC 1783
| || | | |||| | || ||| ||| || ||
sh08074 3781 CATCTCGGATTAGGGGCTCCTGAGTGTGTAGGGAAGGACACGGGAGAGGC 3830
3951 ----+----*----+----*----+----*----+----*----+----* 4000
mpm12243 1784 TCAGAGCTCTGGGAGGACCTTAACTTCTGTGCCTCCTGTGGGGTGGACCT 1833
| |||||||| | | || | | ||||| ||| || |||
sh08074 3831 TTAGAGCTCTTTGGAGGAGGATTCTGCCTTTCCTCCAGTGCCATGAGCCT 3880
4001 ----+----*----+----*----+----*----+----*----+----* 4050
mpm12243 1834 GACTTGCTGAAGGCCTGGAGTCTAAGACCTGACCATGTTCTCAGATCAAG 1883
||| | | | ||| |||| ||| |||||| | || ||| ||||
sh08074 3881 GACACATGAAGGTCTTGGGTTCTATGACTTGACCACATCCTGAGAGCAAG 3930
4051 ----+----*----+----*----+----*----+----*----+----* 4100
mpm12243 1884 GCACTGCCCTGAATCATCTCTGTATCCATGACAAGTCTTTCCTGCCATGA 1933
| ||||| | ||| ||||| |||| ||||| ||| |||
sh08074 3931 GTGGGGCCCTCGACTGTCT.TGTATTGGCCCCAAGCCTTTCTTGCTGTGA 3979
4101 ----+----*----+----*----+----*----+----*----+----* 4150
mpm12243 1934 TCAGCCTCACGCTCAGT.TTCTTTCCTGGCTCAGGAGGCCAGCTCAGAGT 1982
|||| ||| |||||| ||||||||||||| | | ||| ||
sh08074 3980 ACAGCTTCATTCTCAGTCCCCTTTCCTGGCTCAAAAATCGAGCCTAG... 4026
4151 ----+----*----+----*----+----*----+----*----+----* 4200
mpm12243 1983 CCTTTTCCCACAAAAGAAGAGGAAC.AGAGGCAAATGCCCCTC...CCTC 2028
|||||||||||| || || | ||| ||||||| ||||
sh08074 4027 ..........CAAAAGAAGAGGCACGGGAAGGAAACGCCCCTCCCTCCTC 4066
4201 ----+----*----+----*----+----*----+----*----+----* 4250
mpm12243 2029 CTGCAGGCAGCCACATAGCCCGTGCCTTCAGCTCTCGGTGCCCTGGCGAC 2078
|||||||||||||| |||| |||||||||| || |||||||||| ||
sh08074 4067 CTGCAGGCAGCCACTCAGCCTGTGCCTTCAG..CTTGGTGCCCTGGTGAT 4114
4251 ----+----*----+----*----+----*----+----*----+----* 4300
mpm12243 2079 GGTTGCTATGGAGATCTAAAGATAGAGCAGGAGTCAGGAGACCTGGGTCC 2128
||||||||||||||||||||||||||||||||||||||||||||||||||
sh08074 4115 GGTTGCTATGGAGATCTAAAGATAGAGCAGGAGTCAGGAGACCTGGGTCC 4164
4301 ----+----*----+----*----+----*----+----*----+----* 4350
mpm12243 2129 CTCTCCCAGCTCTGCCCACTGAGTGGCTGCTGATCCAGGTCCACCCAGCC 2178
||||||||||| ||||||||| |||||| |||| |||||||||| ||
sh08074 4165 CTCTCCCAGCTTGTCCCACTGAGCGGCTGCCGATCACGGTCCACCCACCC 4214
4351 ----+----*----+----*----+----*----+----*----+----* 4400
mpm12243 2179 CCCACCTCCACCTCCTCTATCCTGAACGGGGCATGCCCTCTCCAGGGAGC 2228
| |||| |||| |||| ||| ||| |
sh08074 4215 ....................CAGGAACCTGGCA.CCCCTATCCCAGGAAC 4243
4401 ----+----*----+----*----+----*----+----*----+----* 4450
mpm12243 2229 TCACTGCCCCTGGGCATCATGTTG.ACTTAATGAATTCTGCTTTCCACAG 2277
|| |||||||||||| | || | |||||||||||||| ||| ||||
sh08074 4244 CCAGTGCCCCTGGGCAGCGCACTGCAGTTAATGAATTCTGCCTTCAACAG 4293
4451 ----+----*----+----*----+----*----+----*----+----* 4500
mpm12243 2278 CCTGGGCCCCAGTGTGCTGCGCCAGCACAGGCCAGATACAGGCAGTCCCA 2327
||||||| | || ||||||| ||||| ||| || ||||||||||||||
sh08074 4294 CCTGGGCTCTAGCGTGCTGCACCAGCTTGGGCTAGCTACAGGCAGTCCCA 4343
4501 ----+----*----+----*----+----*----+----*----+----* 4550
mpm12243 2328 GACTTCTGATGCTCAGCAGTGGAATGTTAGAAGCTGGGAGCCAGGAGCCT 2377
|| || || | ||| |||||| |||||
sh08074 4344 GAATTGGAATATTAAGCCATGGAATCTTAGA................... 4374
4551 ----+----*----+----*----+----*----+----*----+----* 4600
mpm12243 2378 TTAGGATTAGGCATTTATAACTATGGAGTTGCACTCTCCTCACCTCCCCC 2427
|||| | |||||| || || || ||| || | ||
sh08074 4375 .....GTTAGACTTTTATAGTCATAGAAATGTACT........CTTCACC 4411
4601 ----+----*----+----*----+----*----+----*----+----* 4650
mpm12243 2428 AACCCCCATAGCAGAGCTCAGATGCCAGAGAACC...CTGTCCAGCAGAC 2474
| | | | || |||| | |||| | | || |||||
sh08074 4412 ATATCAAAGCTGAAAGTTCAGGACTCTAAGAAACATACAGTGTGACAGAC 4461
4651 ----+----*----+----*----+----*----+----*----+----* 4700
mpm12243 2475 TCAGTGTACAAATGGGTGAACCAAGGCCCATGAG......TGACTCACCC 2518
| | ||| | | ||| | ||| || |||| ||||| |||
sh08074 4462 TTATCGTATACACGGGAAACTGAAGCCCAGTGAGACTAAATGACTTGCCC 4511
4701 ----+----*----+----*----+----*----+----*----+----* 4750
mpm12243 2519 AAGGTGAGTC......TGAGACAGCCCTCCCTACAAGCTCCCCATCACCC 2562
| ||| | | || | |||| | ||| |||| || | | |
sh08074 4512 AGGGTAAAACAGTCCATGGCAGAGCCAGCACTAGAAGCCTCCTAGCTTCA 4561
4751 ----+----*----+----*----+----*----+----*----+----* 4800
mpm12243 2563 CCCCCACACACACACACACACACACACACCTGTGGTTGTACACCA.TGCT 2611
|| || | | || | || || || |
sh08074 4562 ACCTCATGTGCCAA.....................TTCTGCATCAGTGAT 4590
4801 ----+----*----+----*----+----*----+----*----+----* 4850
mpm12243 2612 TTTCAAACTGTGCTCCACAGGCCACTGGGGAACCTTGCCTGGATGGCAGC 2661
|||| ||||| |||| ||||| | ||| | |||| || |||||
sh08074 4591 TTTCGAACTGCGCTCTACAGGAAGCAAGGGTTCTTTGC....ATAGCAGC 4636
4851 ----+----*----+----*----+----*----+----*----+----* 4900
mpm12243 2662 AGTAAAGG....TGGCTGGAGGGATCCCCAG.GTCCCCTTCAATCACAGA 2706
||| || | | || |||||||||| ||||||||| || ||
sh08074 4637 AGTGAAAGGACAGCTCCAGATGGATCCCCAGTACCCCCTTCAACCAGAGC 4686
4901 ----+----*----+----*----+----*----+----*----+----* 4950
mpm12243 2707 GGTCTGTTTTTAACCTCAT...CTTCATGGGGCATAGAGGAATTTTTGT. 2752
| |||| | | ||| | ||||| | || |||||| |
sh08074 4687 AGCTGCATTTTTATCCCATTCATATATTGGGGTTTTGAATTATTTTTATT 4736
4951 ----+----*----+----*----+----*----+----*----+----* 5000
mpm12243 2753 ..CAAAATTGCCTTTTCTACCCCACCCTGAAAAATCACAACAAAGAAACC 2800
| || | ||||| |||| |||||| |||||||
sh08074 4737 TGTACAAAAGGATTTTCCTAGCCACTAAAAAAAATGGCAACAAA...... 4780
5001 ----+----*----+----*----+----*----+----*----+----* 5050
mpm12243 2801 CCTGTTCACTGCATAGCCATGGGGAACAGCTGGGTGATGGGAAGCCTGCA 2850
sh08074 4781 .................................................. 4781
5051 ----+----*----+----*----+----*----+----*----+----* 5100
mpm12243 2851 TGTTGCACCCCAGGGGCTTGGGACCTCTGTCGGGGTTCTACAGGGCATTC 2900
||| || | |
sh08074 4781 .........................TCTCTCTGCTGT............. 4792
5101 ----+----*----+----*----+----*----+----*----+----* 5150
mpm12243 2901 ATTAGGGGTGACTTCTCAGAACCAAGTGGGCAAATTAAAGCTGCATGAAC 2950
|| || | | | || || || |
sh08074 4793 .......GTCACATTTAATAAATAATTGTG.................... 4815
5151 ----+----*----+----*----+----*----+----*----+----* 5200
mpm12243 2951 ATTGGTCAGGACACTTTGTTTTGTCTGGCCCAGGTCCTCAGCCTCGGGGT 3000
|||| | | | |||
sh08074 4816 ..........ACACATAGCT..........................GGGG 4829
5201 ----+----*----+----*----+----*----+----*----+----* 5250
mpm12243 3001 CGTTGTTCTTTAGAGTCTCAGGCTCAGAACAGTGTGACAAAACTGAGAGC 3050
|| || || || || |||| | || | ||
sh08074 4830 GGTGGTGCTGGAG.GTTTCAGAC................CGCCTCACAGG 4862
5251 ----+----*----+----*----+----*----+----*----+----* 5300
mpm12243 3051 CAGAGCTCC.CAAACAGGGTGCATGGGCTCTCCTTGCCCAGCCTGTGACT 3099
||||| ||| ||| | |||||| | | | ||||||
sh08074 4863 CAGAGTTCCAGGGTCAGAGAGCATGG........AGTACTGTGTGTGACC 4904
5301 ----+----*----+----*----+----*----+----*----+----* 5350
mpm12243 3100 TGGGGCAAGACACATGTCATCTATCCCGGCCTCTGAGAACTTCACCAGTG 3149
| | ||| || |
sh08074 4905 TTCTTCCAGAAGCA..................................CG 4920
5351 ----+----*----+----*----+----*----+----*----+----* 5400
mpm12243 3150 TGCCTTGGTGGGTCTTAGTGGCAGTCTTCATGGATGCCCCTGGGGGACTT 3199
|| || | | ||| ||| ||
sh08074 4921 GGCACAGGAGCATGTTAAAGGC........................CCTG 4946
5401 ----+----*----+----*----+----*----+----*----+----* 5450
mpm12243 3200 GAAGCTCAACTGTCCAAGGAAATAGCAGCAACGTGCTAGGCACAGCCTTT 3249
|| | | || | ||| || | || || | ||| |||
sh08074 4947 AAAAGACCAGTGGCAAAGAAACTCCTTTCATTTTGTTTAATCCAGAGTTT 4996
5451 ----+----*----+----*----+----*----+----*----+----* 5500
mpm12243 3250 CCACTGGAGAGCTCCAGCCAAGGCAAGGATTAGCTAGCATACCTCTGAAA 3299
|| ||| | || | ||| | || | |
sh08074 4997 ...........TTCAAGCTTATTTAACTA.....TAGAACACTTTTCTGT 5030
5501 ----+----*----+----*----+----*----+----*----+----* 5550
mpm12243 3300 GGGGTGAATATTAGAGAAATGGTGTTCACAGTGCAAGAGAGTG.GTGAGC 3348
||| | | | | || || || | |||| ||| |
sh08074 5031 GGGTTTCGT.........AGCCTCTTTCTAGCACAGTATAGTGAGTGGGA 5071
5551 ----+----*----+----*----+----*----+----*----+----* 5600
mpm12243 3349 AGGGCTTGAGCCTGTAGGAAAGACAGGGACACTCCCCAACCCCGACCATA 3398
| ||| |||| || || || || || || | | ||
sh08074 5072 AAGGC.....CCTGACTGAGAGTCAAAGATTCTGAGCAGGAACCATGAT. 5115
5601 ----+----*----+----*----+----*----+----*----+----* 5650
mpm12243 3399 GAAGCTTCAAAAGCAATGCTTATACTCATTCCTTACAGGGTCAGGGAGGA 3448
|| | || | | | | | | ||
sh08074 5116 ..................CTCTTCCTGCCTAGTATGTGACTTGAGCAAGA 5147
5651 ----+----*----+----*----+----*----+----*----+----* 5700
mpm12243 3449 CCCGCTTAAGGGGAGAAGCCTAGGGCAATTCCCCTAGGCCTCTCTCTGTA 3498
| | || | ||| ||||||||
sh08074 5148 CACTTTT...................CCTCTCCCCAGGCCTCT....... 5171
5701 ----+----*----+----*----+----*----+----*----+----* 5750
mpm12243 3499 CCATTTTAGGTATTTGATGCCTAGACAGATTAGGCCACTCAGAGGCAACT 3548
||||
sh08074 5172 .........................................GAGGTCTGC 5180
5751 ----+----*----+----*----+----*----+----*----+----* 5800
mpm12243 3549 GACATCCCCTGTCCTGGGTGGGTTGCCTTCCTCTTCACCTCCCTCAGTGT 3598
|| | ||| | || ||| ||||||||||
sh08074 5181 GAGTTTTCCT................CCACCCTTTCCTCTCCCTCAGT.. 5212
5801 ----+----*----+----*----+----*----+----*----+----* 5850
mpm12243 3599 AGAAGCTGAGCAGCCTGGCTACTAGTGGGATTGGTTATCCTGAATATTGG 3648
||| |||| |||||
sh08074 5213 ..............................TTGCACATCC....TATTGA 5228
5851 ----+----*----+----*----+----*----+----*----+----* 5900
mpm12243 3649 CAAGGGCACAAATGTGTCTGAAATGCCAGGA...TGCCAATCTCCTGTCA 3695
| | ||||| | || ||||| || | | | | | ||
sh08074 5229 CTCAGCTCCAAATAGCGGGGGCCTGTCAGGAGCCTGACTCTGTTCAGACA 5278
5901 ----+----*----+----*----+----*----+----*----+----* 5950
mpm12243 3696 CCTGGGAACTCAAGAGCTCACAAAATAGTGGTTGCTGTGCCTGGCAAGGT 3745
|| ||||| ||| ||| ||| |
sh08074 5279 CCAGGGAA.ACAACAGCACACCA........................... 5300
5951 ----+----*----+----*----+----*----+----*----+----* 6000
mpm12243 3746 ATAGGCTGTTGGGATGGAGTTTCCCCTGAGCACTGCCATTATGTGATAGT 3795
sh08074 5301 .................................................. 5301
6001 ----+----*----+----*----+----*----+----*----+----* 6050
mpm12243 3796 GCAATGGCAGGGGGACAGTCAGGACCTGAGCATGACCGGAAGGCCTCAGA 3845
sh08074 5301 .................................................. 5301
6051 ----+----*----+----*----+----*----+----*----+----* 6100
mpm12243 3846 AGACCAACAAAGAGCTCACTTCTCTGTGAGCGAGACAAATTAGCACCTCA 3895
||| |
sh08074 5301 .........................................GGCAGATGC 5309
6101 ----+----*----+----*----+----*----+----*----+----* 6150
mpm12243 3896 AGTTATTCAGTGCTGGGGACTGATTCTAGAGCCTCGAGGATGCTAAGTTA 3945
|||||| | ||| ||| | |||
sh08074 5310 AGTTATGTCCATCGGGGAACTTACAGCCTAGC.................. 5341
6151 ----+----*----+----*----+----*----+----*----+----* 6200
mpm12243 3946 AAGACCATGTGCTCCACCACACCTAGTTCCAGTGGCGATCCCAGTGGGAT 3995
sh08074 5342 .................................................. 5342
6201 ----+----*----+----*----+----*----+----*----+----* 6250
mpm12243 3996 ATCAGTCTGCAGTTAAAACGAGTGGATCGGGTCTCCATGTACCAGCATAG 4045
|| || | | | || | |||| ||
sh08074 5342 ................AAGGAAGGCAGCAATTCAACCTGTA.......AG 5368
6251 ----+----*----+----*----+----*----+----*----+----* 6300
mpm12243 4046 AGTAAACGTTTTAAAAGTCATAATGGAATAAGCTGCACATAGTAAAAGGA 4095
|||| || | |||| | ||| |
sh08074 5369 TCTAAAAGTGATGGGTGTCA......................TGAAAAGG 5396
6301 ----+----*----+----*----+----*----+----*----+----* 6350
mpm12243 4096 CAAGTCCAGGGCTAGCAAGATCCCTTTGCAGCTAACAGTGCTTGCCGGCA 4145
|||| ||||| ||| | | | | || ||
sh08074 5397 TAAGTGCAGGG...............TGCTGGGAGAGTGGTTGGCAGGGG 5431
6351 ----+----*----+----*----+----*----+----*----+----* 6400
mpm12243 4146 AGCCAGACAACCTGAGTTTGAACCCTGGAACCCACAGGGTGAAGAGAGAG 4195
|| | | || || ||| || | ||| || | |
sh08074 5432 CTTTAGCCTAGTCTAGGGAGAGCCCAGGGGCACACCACTGCCAGCGGGGA 5481
6401 ----+----*----+----*----+----*----+----*----+----* 6450
mpm12243 4196 AGTCAACTCCTACAGATTGTCCTCAGTGTGTACACACACAGACTGATAAA 4245
|| | | || || || | ||| || | | | |
sh08074 5482 TAGAGGCTTCAAAAGCTT..........TGAAGTCACTCATATTAAGA.. 5519
6451 ----+----*----+----*----+----*----+----*----+----* 6500
mpm12243 4246 AGCAAGAAGATTTGGGGTTGGGACAATACTTGTACTTGGGAATTATAAAA 4295
sh08074 5520 .................................................. 5520
6501 ----+----*----+----*----+----*----+----*----+----* 6550
mpm12243 4296 CTCTGAAATAATGTTTTCTATTGAGATAGCTCAGCTGCAAGCACAGAACC 4345
sh08074 5520 .................................................. 5520
6551 ----+----*----+----*----+----*----+----*----+----* 6600
mpm12243 4346 TGATGGAGAGATGAAATCCAGGTGTTGGTTCCCTGGTAGCTGCTTTGTTA 4395
sh08074 5520 .................................................. 5520
6601 ----+----*----+----*----+----*----+----*----+----* 6650
mpm12243 4396 TTTTCTTTTCCCCAACCTGTGTTTAAGAACAGTTCTAGGGCTGGGCAGTG 4445
||||| | ||| |
sh08074 5520 ..................GTGTTGCCGGACA.................CG 5534
6651 ----+----*----+----*----+----*----+----*----+----* 6700
mpm12243 4446 GTGGCACACGCCTTTAATCCCAGCAC.TTAGGAGGCAGAGGCAGGCAGAT 4494
||||| || |||| |||||||||||| || |||||| | |||||||||||
sh08074 5535 GTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGCGGCAGGCAGAT 5584
6701 ----+----*----+----*----+----*----+----*----+----* 6750
mpm12243 4495 TTCTGAGTTTGAGGCCAGCCTGACCTGCAGGTCTACAGCGAATTCCAGGA 4544
| | |||| |||| | ||| |||
sh08074 5585 T.....GCCTGAGCCCAG.....................AAGTTCGAGGC 5608
6751 ----+----*----+----*----+----*----+----*----+----* 6800
mpm12243 4545 CAGCCAGGGCTATACAGAGAAACCCTATTTTTAAAAATAAAAATAAAATA 4594
||||| || | | | ||||||| | | ||
sh08074 5609 CAGCCTGGCCAACATGACAAAACCCTGTCTCTAC................ 5642
6801 ----+- 6806
mpm12243 4595 AAACAG 4600
sh08074 5643 ...... 5643