# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mpm12222.fasta.nr -Q ../query/mKIAA0247.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA0247, 324 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7920062 sequences Expectation_n fit: rho(ln(x))= 5.0095+/-0.000185; mu= 11.0603+/- 0.010 mean_var=73.3320+/-14.068, 0's: 36 Z-trim: 41 B-trim: 19 in 1/65 Lambda= 0.149771 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|26326227|dbj|BAC26857.1| unnamed protein produc ( 323) 2179 479.7 3.3e-133 gi|25955694|gb|AAH40401.1| RIKEN cDNA 4933426M11 g ( 302) 1776 392.6 5.1e-107 gi|74224854|dbj|BAE37934.1| unnamed protein produc ( 302) 1767 390.6 2e-106 gi|74207253|dbj|BAE30815.1| unnamed protein produc ( 302) 1762 389.6 4.2e-106 gi|148670736|gb|EDL02683.1| RIKEN cDNA 4933426M11, ( 300) 1745 385.9 5.3e-105 gi|109084082|ref|XP_001109433.1| PREDICTED: hypoth ( 303) 1584 351.1 1.6e-94 gi|115530831|emb|CAL49342.1| novel Sushi domain (S ( 304) 1138 254.7 1.6e-65 gi|28277357|gb|AAH44292.1| MGC53888 protein [Xenop ( 300) 1134 253.9 2.9e-65 gi|27924410|gb|AAH44987.1| Kiaa0247-prov protein [ ( 298) 1107 248.0 1.7e-63 gi|56207620|emb|CAI20595.1| novel protein [Danio r ( 364) 891 201.4 2.2e-49 gi|47230251|emb|CAG10665.1| unnamed protein produc ( 416) 689 157.8 3.3e-36 gi|120537372|gb|AAI29043.1| Zgc:154022 protein [Da ( 231) 529 123.0 5.4e-26 gi|224047078|ref|XP_002189811.1| PREDICTED: simila ( 443) 487 114.2 4.7e-23 gi|126306873|ref|XP_001367649.1| PREDICTED: simila ( 493) 477 112.1 2.3e-22 gi|126306875|ref|XP_001367693.1| PREDICTED: simila ( 495) 473 111.2 4.2e-22 gi|194227328|ref|XP_001500314.2| PREDICTED: simila ( 490) 471 110.8 5.6e-22 gi|74006403|ref|XP_853550.1| PREDICTED: similar to ( 471) 467 109.9 9.9e-22 gi|221041556|dbj|BAH12455.1| unnamed protein produ ( 330) 464 109.1 1.2e-21 gi|74747494|sp|Q5VX71.1|SUSD4_HUMAN RecName: Full= ( 490) 464 109.3 1.6e-21 gi|148342576|gb|ABQ59058.1| SUSD4 protein [Homo sa ( 490) 464 109.3 1.6e-21 gi|193788348|dbj|BAG53242.1| unnamed protein produ ( 490) 464 109.3 1.6e-21 gi|75054922|sp|Q5R8M2.1|SUSD4_PONAB RecName: Full= ( 489) 463 109.1 1.9e-21 gi|151553655|gb|AAI48047.1| SUSD4 protein [Bos tau ( 490) 462 108.8 2.2e-21 gi|149040925|gb|EDL94882.1| similar to RIKEN cDNA ( 490) 462 108.8 2.2e-21 gi|81896076|sp|Q8BH32.1|SUSD4_MOUSE RecName: Full= ( 490) 461 108.6 2.5e-21 gi|148681153|gb|EDL13100.1| sushi domain containin ( 491) 461 108.6 2.5e-21 gi|221040808|dbj|BAH12105.1| unnamed protein produ ( 421) 460 108.4 2.6e-21 gi|37182113|gb|AAQ88859.1| YHGM196 [Homo sapiens] ( 490) 460 108.4 2.9e-21 gi|37589967|gb|AAH21842.2| Sushi domain containing ( 492) 457 107.8 4.6e-21 gi|109018149|ref|XP_001098775.1| PREDICTED: simila ( 491) 455 107.3 6.2e-21 gi|15021831|dbj|BAB62196.1| hypothetical protein [ ( 393) 451 106.4 9.5e-21 gi|111308103|gb|AAI21459.1| Toll-like receptor 5 [ ( 477) 451 106.5 1.1e-20 gi|109018153|ref|XP_001098978.1| PREDICTED: simila ( 493) 451 106.5 1.1e-20 gi|118087846|ref|XP_001233777.1| PREDICTED: simila ( 403) 443 104.7 3.2e-20 gi|47224339|emb|CAG09185.1| unnamed protein produc ( 254) 434 102.6 8.8e-20 gi|68439713|ref|XP_688793.1| PREDICTED: similar to ( 484) 432 102.4 1.9e-19 gi|116487543|gb|AAI25826.1| Zgc:152863 [Danio reri ( 213) 323 78.5 1.3e-12 gi|149025030|gb|EDL81397.1| rCG20613, isoform CRA_ ( 62) 257 63.8 9.9e-09 gi|47210063|emb|CAF96126.1| unnamed protein produc ( 305) 205 53.1 7.9e-05 >>gi|26326227|dbj|BAC26857.1| unnamed protein product [M (323 aa) initn: 2179 init1: 2179 opt: 2179 Z-score: 2547.8 bits: 479.7 E(): 3.3e-133 Smith-Waterman score: 2179; 100.000% identity (100.000% similar) in 323 aa overlap (2-324:1-323) 10 20 30 40 50 60 mKIAA0 KMCHGKIAPKSSSEFVVTSVGHGVFLQLVILCALLGDGLASGKWMELENILSEVTQTQKD ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 MCHGKIAPKSSSEFVVTSVGHGVFLQLVILCALLGDGLASGKWMELENILSEVTQTQKD 10 20 30 40 50 70 80 90 100 110 120 mKIAA0 MHVCPLPPEPENGGYICHPRPCKDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWTPAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 MHVCPLPPEPENGGYICHPRPCKDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWTPAM 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA0 EVSCHLIEDKETHALGVPALSIVASTASSVALILLLVVLFVLLQPKLKSFHHSRREQGVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 EVSCHLIEDKETHALGVPALSIVASTASSVALILLLVVLFVLLQPKLKSFHHSRREQGVS 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA0 GDQVSIMVDGVQVALPSYEEAVYGSSGHCMPPADPRVQIVLSEGSAPSGRNMPREQQLQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 GDQVSIMVDGVQVALPSYEEAVYGSSGHCMPPADPRVQIVLSEGSAPSGRNMPREQQLQG 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA0 QEACSSAGGEDEAPGHSGLCEAWGSQGSETVMVHQATTSSWVAGSGSSRPTHKDTADSEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 QEACSSAGGEDEAPGHSGLCEAWGSQGSETVMVHQATTSSWVAGSGSSRPTHKDTADSEN 240 250 260 270 280 290 310 320 mKIAA0 SDIQSLLSLTSEEYTDDIPLLKEA :::::::::::::::::::::::: gi|263 SDIQSLLSLTSEEYTDDIPLLKEA 300 310 320 >>gi|25955694|gb|AAH40401.1| RIKEN cDNA 4933426M11 gene (302 aa) initn: 2024 init1: 1776 opt: 1776 Z-score: 2077.6 bits: 392.6 E(): 5.1e-107 Smith-Waterman score: 1986; 93.498% identity (93.498% similar) in 323 aa overlap (2-324:1-302) 10 20 30 40 50 60 mKIAA0 KMCHGKIAPKSSSEFVVTSVGHGVFLQLVILCALLGDGLASGKWMELENILSEVTQTQKD :::::::::::::::::::::::::::::::::::::::: gi|259 MCHGKIAPKSSSEFVVTSVGHGVFLQLVILCALLGDGLAS------------------- 10 20 30 40 70 80 90 100 110 120 mKIAA0 MHVCPLPPEPENGGYICHPRPCKDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWTPAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|259 --VCPLPPEPENGGYICHPRPCKDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWTPAM 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 EVSCHLIEDKETHALGVPALSIVASTASSVALILLLVVLFVLLQPKLKSFHHSRREQGVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|259 EVSCHLIEDKETHALGVPALSIVASTASSVALILLLVVLFVLLQPKLKSFHHSRREQGVS 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 GDQVSIMVDGVQVALPSYEEAVYGSSGHCMPPADPRVQIVLSEGSAPSGRNMPREQQLQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|259 GDQVSIMVDGVQVALPSYEEAVYGSSGHCMPPADPRVQIVLSEGSAPSGRNMPREQQLQG 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 QEACSSAGGEDEAPGHSGLCEAWGSQGSETVMVHQATTSSWVAGSGSSRPTHKDTADSEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|259 QEACSSAGGEDEAPGHSGLCEAWGSQGSETVMVHQATTSSWVAGSGSSRPTHKDTADSEN 220 230 240 250 260 270 310 320 mKIAA0 SDIQSLLSLTSEEYTDDIPLLKEA :::::::::::::::::::::::: gi|259 SDIQSLLSLTSEEYTDDIPLLKEA 280 290 300 >>gi|74224854|dbj|BAE37934.1| unnamed protein product [M (302 aa) initn: 2015 init1: 1767 opt: 1767 Z-score: 2067.1 bits: 390.6 E(): 2e-106 Smith-Waterman score: 1977; 93.189% identity (93.189% similar) in 323 aa overlap (2-324:1-302) 10 20 30 40 50 60 mKIAA0 KMCHGKIAPKSSSEFVVTSVGHGVFLQLVILCALLGDGLASGKWMELENILSEVTQTQKD :::::::::::::::::::::::::::::::::::::::: gi|742 MCHGKIAPKSSSEFVVTSVGHGVFLQLVILCALLGDGLAS------------------- 10 20 30 40 70 80 90 100 110 120 mKIAA0 MHVCPLPPEPENGGYICHPRPCKDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWTPAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 --VCPLPPEPENGGYICHPRPCKDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWTPAM 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 EVSCHLIEDKETHALGVPALSIVASTASSVALILLLVVLFVLLQPKLKSFHHSRREQGVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 EVSCHLIEDKETHALGVPALSIVASTASSVALILLLVVLFVLLQPKLKSFHHSRREQGVS 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 GDQVSIMVDGVQVALPSYEEAVYGSSGHCMPPADPRVQIVLSEGSAPSGRNMPREQQLQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 GDQVSIMVDGVQVALPSYEEAVYGSSGHCMPPADPRVQIVLSEGSAPSGRNMPREQQLQG 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 QEACSSAGGEDEAPGHSGLCEAWGSQGSETVMVHQATTSSWVAGSGSSRPTHKDTADSEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::: gi|742 QEACSSAGGEDEAPGHSGLCEAWGSQGSETVMVHQATTSSWVAGSGSSRPTHKDTAGSEN 220 230 240 250 260 270 310 320 mKIAA0 SDIQSLLSLTSEEYTDDIPLLKEA :::::::::::::::::::::::: gi|742 SDIQSLLSLTSEEYTDDIPLLKEA 280 290 300 >>gi|74207253|dbj|BAE30815.1| unnamed protein product [M (302 aa) initn: 2010 init1: 1762 opt: 1762 Z-score: 2061.3 bits: 389.6 E(): 4.2e-106 Smith-Waterman score: 1972; 93.189% identity (93.189% similar) in 323 aa overlap (2-324:1-302) 10 20 30 40 50 60 mKIAA0 KMCHGKIAPKSSSEFVVTSVGHGVFLQLVILCALLGDGLASGKWMELENILSEVTQTQKD :::::::::::::::::::::::::::::::::::::::: gi|742 MCHGKIAPKSSSEFVVTSVGHGVFLQLVILCALLGDGLAS------------------- 10 20 30 40 70 80 90 100 110 120 mKIAA0 MHVCPLPPEPENGGYICHPRPCKDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWTPAM :::: ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 --VCPLLPEPENGGYICHPRPCKDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWTPAM 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 EVSCHLIEDKETHALGVPALSIVASTASSVALILLLVVLFVLLQPKLKSFHHSRREQGVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 EVSCHLIEDKETHALGVPALSIVASTASSVALILLLVVLFVLLQPKLKSFHHSRREQGVS 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 GDQVSIMVDGVQVALPSYEEAVYGSSGHCMPPADPRVQIVLSEGSAPSGRNMPREQQLQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 GDQVSIMVDGVQVALPSYEEAVYGSSGHCMPPADPRVQIVLSEGSAPSGRNMPREQQLQG 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 QEACSSAGGEDEAPGHSGLCEAWGSQGSETVMVHQATTSSWVAGSGSSRPTHKDTADSEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 QEACSSAGGEDEAPGHSGLCEAWGSQGSETVMVHQATTSSWVAGSGSSRPTHKDTADSEN 220 230 240 250 260 270 310 320 mKIAA0 SDIQSLLSLTSEEYTDDIPLLKEA :::::::::::::::::::::::: gi|742 SDIQSLLSLTSEEYTDDIPLLKEA 280 290 300 >>gi|148670736|gb|EDL02683.1| RIKEN cDNA 4933426M11, iso (300 aa) initn: 1520 init1: 1272 opt: 1745 Z-score: 2041.5 bits: 385.9 E(): 5.3e-105 Smith-Waterman score: 1955; 92.570% identity (92.879% similar) in 323 aa overlap (2-324:1-300) 10 20 30 40 50 60 mKIAA0 KMCHGKIAPKSSSEFVVTSVGHGVFLQLVILCALLGDGLASGKWMELENILSEVTQTQKD :::::::::::::::::::::::::::::::::::::::: gi|148 MCHGKIAPKSSSEFVVTSVGHGVFLQLVILCALLGDGLAS------------------- 10 20 30 40 70 80 90 100 110 120 mKIAA0 MHVCPLPPEPENGGYICHPRPCKDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWTPAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 --VCPLPPEPENGGYICHPRPCKDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWTPAM 50 60 70 80 90 130 140 150 160 170 180 mKIAA0 EVSCHLIEDKETHALGVPALSIVASTASSVALILLLVVLFVLLQPKLKSFHHSRREQGVS :::::: .::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 EVSCHL--NKETHALGVPALSIVASTASSVALILLLVVLFVLLQPKLKSFHHSRREQGVS 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA0 GDQVSIMVDGVQVALPSYEEAVYGSSGHCMPPADPRVQIVLSEGSAPSGRNMPREQQLQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GDQVSIMVDGVQVALPSYEEAVYGSSGHCMPPADPRVQIVLSEGSAPSGRNMPREQQLQG 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA0 QEACSSAGGEDEAPGHSGLCEAWGSQGSETVMVHQATTSSWVAGSGSSRPTHKDTADSEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 QEACSSAGGEDEAPGHSGLCEAWGSQGSETVMVHQATTSSWVAGSGSSRPTHKDTADSEN 220 230 240 250 260 270 310 320 mKIAA0 SDIQSLLSLTSEEYTDDIPLLKEA :::::::::::::::::::::::: gi|148 SDIQSLLSLTSEEYTDDIPLLKEA 280 290 300 >>gi|109084082|ref|XP_001109433.1| PREDICTED: hypothetic (303 aa) initn: 1305 init1: 1095 opt: 1584 Z-score: 1853.4 bits: 351.1 E(): 1.6e-94 Smith-Waterman score: 1756; 82.407% identity (89.815% similar) in 324 aa overlap (2-324:1-303) 10 20 30 40 50 60 mKIAA0 KMCHGKIAPKSSSEFVVTSVGHGVFLQLVILCALLGDGLASGKWMELENILSEVTQTQKD ::::.:::::.: :.:.:::::::: :::::.:::::::: gi|109 MCHGRIAPKSTSVFAVASVGHGVFLPLVILCTLLGDGLAS------------------- 10 20 30 40 70 80 90 100 110 120 mKIAA0 MHVCPLPPEPENGGYICHPRPCKDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWTPAM ::::::::::::::::::::.::::::::::::::::::::::::::::::::: ::: gi|109 --VCPLPPEPENGGYICHPRPCRDPLTAGSVIEYLCAEGYMLKGDYKYLTCKNGEWKPAM 50 60 70 80 90 130 140 150 160 170 mKIAA0 EVSCHLIEDKETH-ALGVPALSIVASTASSVALILLLVVLFVLLQPKLKSFHHSRREQGV :.::.: :::.:: .::::.::::::::::::::::::::::::::::::::::::.::: gi|109 EISCRLNEDKDTHTSLGVPTLSIVASTASSVALILLLVVLFVLLQPKLKSFHHSRRDQGV 100 110 120 130 140 150 180 190 200 210 220 230 mKIAA0 SGDQVSIMVDGVQVALPSYEEAVYGSSGHCMPPADPRVQIVLSEGSAPSGRNMPREQQLQ ::::::::::::::::::::::::::::::.:::::::::::::::.::::.. :::: gi|109 SGDQVSIMVDGVQVALPSYEEAVYGSSGHCVPPADPRVQIVLSEGSGPSGRSVSREQQPP 160 170 180 190 200 210 240 250 260 270 280 290 mKIAA0 GQEACSSAGGEDEAPGHSGLCEAWGSQGSETVMVHQATTSSWVAGSGSSRPTHKDTADSE : :::::::::::::.:::::.:::.::::::::::::::::::::. . .::..:::: gi|109 DQGACSSAGGEDEAPGQSGLCEVWGSRGSETVMVHQATTSSWVAGSGNRQLAHKEAADSE 220 230 240 250 260 270 300 310 320 mKIAA0 NSDIQSLLSLTSEEYTDDIPLLKEA ::::::::::::::::::::::::: gi|109 NSDIQSLLSLTSEEYTDDIPLLKEA 280 290 300 >>gi|115530831|emb|CAL49342.1| novel Sushi domain (SCR r (304 aa) initn: 606 init1: 606 opt: 1138 Z-score: 1332.5 bits: 254.7 E(): 1.6e-65 Smith-Waterman score: 1138; 66.912% identity (81.618% similar) in 272 aa overlap (63-324:42-304) 40 50 60 70 80 90 mKIAA0 ALLGDGLASGKWMELENILSEVTQTQKDMHVCPLPPEPENGGYICHPRPCKDPLTAGSVI ::: ::::::::..::: :..:::.:::: gi|115 PWVGVWSFGRLRLYMLLLLFHFFVPFALSSVCPPPPEPENGGFLCHPPHCEQPLTSGSVI 20 30 40 50 60 70 100 110 120 130 140 150 mKIAA0 EYLCAEGYMLKGDYKYLTCKNGEWTPAMEVSCHLIEDKETHA-LGVPALSIVASTASSVA ::.::::::::::::.:::::: :.: : .::.: .: .::. ::::.:::::::::::: gi|115 EYFCAEGYMLKGDYKFLTCKNGVWSPPMGISCRLNQDTNTHSSLGVPTLSIVASTASSVA 80 90 100 110 120 130 160 170 180 190 200 210 mKIAA0 LILLLVVLFVLLQPKLKSFHHSRREQGVSGDQVSIMVDGVQVALPSYEEAVYGSSGHCMP :::::.::::::::::::::::::: : :. ::::::::::::::::::::::.:.:.: gi|115 LILLLIVLFVLLQPKLKSFHHSRREACVPGEPVSIMVDGVQVALPSYEEAVYGSAGNCIP 140 150 160 170 180 190 220 230 240 250 260 mKIAA0 PADPRVQIVLSEGSAPSGRNMPREQQLQGQEACSSA---------GGEDEAPGHSGLCEA :. ::::::::: :: .::..: : .:::. : .. ::.. : gi|115 SASSRVQIVLSEG--PS-----EEQDIQ-QAVCSSSTTGRNLTGSGTTGHSHGHASQSSA 200 210 220 230 240 270 280 290 300 310 320 mKIAA0 WGSQGSETVMVHQATTSSWVAGSGSSRPTHKDTADSENSDIQSLLSLTSEEYTDDIPLLK :: ::::.::::..:.:: :. :. .. ::::.::.::::::.:::::::::::: gi|115 GCSQHSETVLVHQASSSQWVLGA-ESQTLSREGADSESSDVQSLLSLSSEEYTDDIPLLK 250 260 270 280 290 300 mKIAA0 EA :: gi|115 EA >>gi|28277357|gb|AAH44292.1| MGC53888 protein [Xenopus l (300 aa) initn: 608 init1: 608 opt: 1134 Z-score: 1328.0 bits: 253.9 E(): 2.9e-65 Smith-Waterman score: 1134; 67.528% identity (83.026% similar) in 271 aa overlap (63-324:39-300) 40 50 60 70 80 90 mKIAA0 ALLGDGLASGKWMELENILSEVTQTQKDMHVCPLPPEPENGGYICHPRPCKDPLTAGSVI ::: ::::::::..::: :..:::.:::: gi|282 VAVSSFGRLKLYMLLLLFQYFVPFALSSGLVCPPPPEPENGGFLCHPPHCEQPLTSGSVI 10 20 30 40 50 60 100 110 120 130 140 150 mKIAA0 EYLCAEGYMLKGDYKYLTCKNGEWTPAMEVSCHLIEDKETHA-LGVPALSIVASTASSVA ::.::::::::::::.::::.: :.: : .::.: .: .::. ::::.:::::::::::: gi|282 EYFCAEGYMLKGDYKFLTCKSGVWSPPMGISCRLNQDTNTHSSLGVPTLSIVASTASSVA 70 80 90 100 110 120 160 170 180 190 200 210 mKIAA0 LILLLVVLFVLLQPKLKSFHHSRREQGVSGDQVSIMVDGVQVALPSYEEAVYGSSGHCMP :::::.::::::::::::::::::: .: :.:::::::::::::::::::::::.:.:.: gi|282 LILLLIVLFVLLQPKLKSFHHSRREASVPGEQVSIMVDGVQVALPSYEEAVYGSAGNCIP 130 140 150 160 170 180 220 230 240 250 260 mKIAA0 PADPRVQIVLSEGSAPSGRNMPREQQLQGQEACSSA-------GGEDEAPGHSGLCEAWG :. ::::::::: :: .::..: : ::::. :. . ::.. : . gi|282 TASSRVQIVLSEG--PS-----EEQDIQ-QAACSSSTTGQNLIGSGTIGHGHASQSSAGS 190 200 210 220 230 240 270 280 290 300 310 320 mKIAA0 SQGSETVMVHQATTSS-WVAGSGSSRPTHKDTADSENSDIQSLLSLTSEEYTDDIPLLKE :: ::::.::::..:: :: .. :. .. :::::::..:::::.::::::::::::: gi|282 SQHSETVLVHQASSSSQWVL-AAESHTLSREGADSENSDVHSLLSLSSEEYTDDIPLLKE 250 260 270 280 290 mKIAA0 A : gi|282 A 300 >>gi|27924410|gb|AAH44987.1| Kiaa0247-prov protein [Xeno (298 aa) initn: 715 init1: 471 opt: 1107 Z-score: 1296.5 bits: 248.0 E(): 1.7e-63 Smith-Waterman score: 1107; 67.041% identity (82.022% similar) in 267 aa overlap (64-324:41-298) 40 50 60 70 80 90 mKIAA0 LLGDGLASGKWMELENILSEVTQTQKDMHVCPLPPEPENGGYICHPRPCKDPLTAGSVIE :: ::::::::..::: :..:: .::::: gi|279 PPWVAVSSFGRLYMFLLLFHFFVPFALTSACPPPPEPENGGFLCHPPHCEQPLISGSVIE 20 30 40 50 60 70 100 110 120 130 140 150 mKIAA0 YLCAEGYMLKGDYKYLTCKNGEWTPAMEVSCHLIEDKETHA-LGVPALSIVASTASSVAL :.::::::::::::.:::::: :.: : .::.: .: .::. :.::.::::::::::::: gi|279 YFCAEGYMLKGDYKFLTCKNGVWSPPMGISCRLNQDTNTHSSLSVPTLSIVASTASSVAL 80 90 100 110 120 130 160 170 180 190 200 210 mKIAA0 ILLLVVLFVLLQPKLKSFHHSRREQGVSGDQVSIMVDGVQVALPSYEEAVYGSSGHCMPP ::::::::::::::::::.::::: : :.:::::::::::::::::::::::.:.:.: gi|279 ILLLVVLFVLLQPKLKSFQHSRREACVPGEQVSIMVDGVQVALPSYEEAVYGSAGNCIPS 140 150 160 170 180 190 220 230 240 250 260 mKIAA0 ADPRVQIVLSEGSAPSGRNMPREQQLQGQEACSSAGGEDE--APG---HSGLCEAWGSQG :. ::::::::: :: .::..: : .:::. . . : :. . .:: gi|279 ASSRVQIVLSEG--PS-----EEQEIQ-QATCSSSTTSHNLMSSGTTVHGHGQPSQSSQH 200 210 220 230 240 270 280 290 300 310 320 mKIAA0 SETVMVHQATTSSWVAGSGSSRPTHKDTADSENSDIQSLLSLTSEEYTDDIPLLKEA ::::.::::. :.:: :. :. .. :::::::.::::::.:::::::::::::: gi|279 SETVLVHQASPSQWVLGA-ESQTLSREGADSENSDVQSLLSLSSEEYTDDIPLLKEA 250 260 270 280 290 >>gi|56207620|emb|CAI20595.1| novel protein [Danio rerio (364 aa) initn: 402 init1: 304 opt: 891 Z-score: 1043.1 bits: 201.4 E(): 2.2e-49 Smith-Waterman score: 896; 57.455% identity (73.818% similar) in 275 aa overlap (63-324:105-364) 40 50 60 70 80 90 mKIAA0 ALLGDGLASGKWMELENILSEVTQTQKDMHVCPLPPEPENGGYICHPRPCKDPLTAGSVI :: : ::::::: ::: ::. :: :.:: gi|562 LDGVSMISCTVTGQWSSNPPRCIKNDGMYDVCQPPSEPENGGYNCHPSPCHR-LTQGTVI 80 90 100 110 120 130 100 110 120 130 140 150 mKIAA0 EYLCAEGYMLKGDYKYLTCKNGEWTPAMEVSCHLIEDKETHA-LGVPALSIVASTASSVA ::.: :::.::: :.. ::..:::. :..::: .. .: :. : .:::::::::::::: gi|562 EYFCDEGYILKGGYQFRTCESGEWNSPMQISCHPVQGEEQHSSLPMPALSIVASTASSVA 140 150 160 170 180 190 160 170 180 190 200 210 mKIAA0 LILLLVVLFVLLQPKLKSFHHSR-REQGVSGDQVSIMVDGVQVALPSYEEAVYGSSGHCM ::::::::::::::::::::::: :::::::.. :.:: ::::.::::::::::..: . gi|562 LILLLVVLFVLLQPKLKSFHHSRSREQGVSGQHSSMMVGGVQVSLPSYEEAVYGAGGTSV 200 210 220 230 240 250 220 230 240 250 260 270 mKIAA0 PPADPRVQIVLSEGSAPSGRNMPREQQLQGQEACSSAGGEDEAPGHSGLCEAWGSQGSET :: . ::::::::: . . : :: :.. . :.. : . : :.: :: gi|562 PPPESRVQIVLSEGPQAEALHEPLEQA-QASYSFPSTS----AAASS--CHA------ET 260 270 280 290 300 280 290 300 310 mKIAA0 VMVHQATTSS---------W-VAGSGSSRPTHKDTADSENSDIQSLLSLTS-EEYTDDIP :.:::.. :: : : :.. : :.. . ::.:: .::::.:: :.: :::: gi|562 VLVHQVACSSSPSSSSSPSWAVEQPGAAAPLHRQQS-SESSDQHSLLSVTSAEDYGDDIP 310 320 330 340 350 320 mKIAA0 LLKEA ::::: gi|562 LLKEA 360 324 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Fri Mar 13 15:54:13 2009 done: Fri Mar 13 16:00:08 2009 Total Scan time: 818.630 Total Display time: 0.060 Function used was FASTA [version 34.26.5 April 26, 2007]