# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mpm12077.fasta.nr -Q ../query/mKIAA1460.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1460, 265 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7917407 sequences Expectation_n fit: rho(ln(x))= 5.8517+/-0.000193; mu= 6.2904+/- 0.011 mean_var=94.5762+/-18.095, 0's: 38 Z-trim: 44 B-trim: 51 in 1/65 Lambda= 0.131881 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|74213732|dbj|BAC39039.2| unnamed protein produc ( 878) 1766 345.9 1.4e-92 gi|148685345|gb|EDL17292.1| mCG20982, isoform CRA_ (1884) 1766 346.2 2.4e-92 gi|148685343|gb|EDL17290.1| mCG20982, isoform CRA_ (1892) 1766 346.2 2.4e-92 gi|148685344|gb|EDL17291.1| mCG20982, isoform CRA_ (1893) 1766 346.2 2.5e-92 gi|117190552|ref|NP_659174.3| trinucleotide repeat (1896) 1766 346.2 2.5e-92 gi|74181174|dbj|BAE27849.1| unnamed protein produc (1896) 1766 346.2 2.5e-92 gi|148685346|gb|EDL17293.1| mCG20982, isoform CRA_ (1937) 1766 346.2 2.5e-92 gi|148685347|gb|EDL17294.1| mCG20982, isoform CRA_ (1953) 1766 346.2 2.5e-92 gi|149067991|gb|EDM17543.1| trinucleotide repeat c (1894) 1734 340.1 1.7e-90 gi|149067992|gb|EDM17544.1| trinucleotide repeat c (1904) 1734 340.1 1.7e-90 gi|149067990|gb|EDM17542.1| trinucleotide repeat c (1915) 1734 340.1 1.7e-90 gi|149067987|gb|EDM17539.1| trinucleotide repeat c (1937) 1734 340.1 1.7e-90 gi|149067989|gb|EDM17541.1| trinucleotide repeat c (1954) 1734 340.1 1.7e-90 gi|73958646|ref|XP_860796.1| PREDICTED: similar to (1063) 1642 322.4 2e-85 gi|73958648|ref|XP_860826.1| PREDICTED: similar to (1101) 1642 322.4 2e-85 gi|119576187|gb|EAW55783.1| trinucleotide repeat c (1601) 1644 322.9 2.1e-85 gi|73958650|ref|XP_547086.2| PREDICTED: similar to (1708) 1642 322.6 2.9e-85 gi|114661685|ref|XP_510885.2| PREDICTED: trinucleo (2108) 1641 322.4 3.8e-85 gi|119916998|ref|XP_614640.3| PREDICTED: similar t (1958) 1639 322.0 4.7e-85 gi|194219119|ref|XP_001501299.2| PREDICTED: trinuc (1980) 1639 322.0 4.8e-85 gi|21307718|gb|AAK62026.1| GW182 autoantigen [Homo (1709) 1637 321.6 5.5e-85 gi|119576188|gb|EAW55784.1| trinucleotide repeat c (1935) 1637 321.6 6.1e-85 gi|116805348|ref|NP_055309.2| trinucleotide repeat (1962) 1637 321.6 6.2e-85 gi|62287897|sp|Q8NDV7.1|TNR6A_HUMAN RecName: Full= (1962) 1637 321.6 6.2e-85 gi|109127953|ref|XP_001098013.1| PREDICTED: simila (1709) 1636 321.4 6.3e-85 gi|109127951|ref|XP_001098210.1| PREDICTED: simila (1937) 1636 321.5 7e-85 gi|116284057|gb|AAH26849.1| Tnrc6a protein [Mus mu (1017) 1589 312.3 2.1e-82 gi|126335241|ref|XP_001369211.1| PREDICTED: simila (1910) 1423 280.9 1.1e-72 gi|118097958|ref|XP_414871.2| PREDICTED: similar t (1906) 1395 275.6 4.4e-71 gi|149409007|ref|XP_001505551.1| PREDICTED: simila (1935) 1391 274.8 7.5e-71 gi|224070154|ref|XP_002196372.1| PREDICTED: trinuc (1926) 1378 272.4 4.1e-70 gi|52545832|emb|CAH56236.1| hypothetical protein [ (1053) 1329 262.8 1.7e-67 gi|194226868|ref|XP_001500122.2| PREDICTED: trinuc (1714) 642 132.3 5.4e-28 gi|109094291|ref|XP_001101111.1| PREDICTED: trinuc (1722) 642 132.3 5.4e-28 gi|119580774|gb|EAW60370.1| trinucleotide repeat c (1091) 639 131.6 5.7e-28 gi|119580772|gb|EAW60368.1| trinucleotide repeat c (1527) 639 131.7 7.4e-28 gi|168269678|dbj|BAG09966.1| trinucleotide repeat- (1722) 639 131.7 8.1e-28 gi|38258268|sp|Q9UPQ9.3|TNC6B_HUMAN RecName: Full= (1723) 639 131.7 8.1e-28 gi|119580777|gb|EAW60373.1| trinucleotide repeat c (1759) 639 131.7 8.2e-28 gi|73969030|ref|XP_859340.1| PREDICTED: similar to (1726) 637 131.3 1.1e-27 gi|119893244|ref|XP_606579.3| PREDICTED: similar t (1726) 629 129.8 3e-27 gi|168985141|emb|CAQ08931.1| trinucleotide repeat (1390) 623 128.6 5.6e-27 gi|194377566|dbj|BAG57731.1| unnamed protein produ (1833) 623 128.7 7e-27 gi|198041672|ref|NP_620200.2| trinucleotide repeat (1818) 622 128.5 7.9e-27 gi|73969034|ref|XP_859411.1| PREDICTED: similar to (1720) 621 128.3 8.7e-27 gi|73969036|ref|XP_538361.2| PREDICTED: similar to (1779) 621 128.3 8.9e-27 gi|148672647|gb|EDL04594.1| trinucleotide repeat c ( 943) 616 127.1 1.1e-26 gi|159110982|ref|NP_796098.3| trinucleotide repeat (1774) 618 127.7 1.3e-26 gi|67782332|ref|NP_659061.2| trinucleotide repeat (1810) 618 127.7 1.3e-26 gi|148672646|gb|EDL04593.1| trinucleotide repeat c (1817) 616 127.4 1.7e-26 >>gi|74213732|dbj|BAC39039.2| unnamed protein product [M (878 aa) initn: 1766 init1: 1766 opt: 1766 Z-score: 1818.7 bits: 345.9 E(): 1.4e-92 Smith-Waterman score: 1766; 99.590% identity (100.000% similar) in 244 aa overlap (1-244:487-730) 10 20 30 mKIAA1 SNQWGGCKEDKSAWNDSQKSKQGWGDGQKS ::::::::::::.::::::::::::::::: gi|742 PKPTLRWGDSKGSNCQGGWEDDSAATGMIKSNQWGGCKEDKSTWNDSQKSKQGWGDGQKS 460 470 480 490 500 510 40 50 60 70 80 90 mKIAA1 SQGWSISAGDNWGESSRSNHWGEANKKSSSGGSDSDRSISGWNELGKTSSFTWGNNINPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 SQGWSISAGDNWGESSRSNHWGEANKKSSSGGSDSDRSISGWNELGKTSSFTWGNNINPN 520 530 540 550 560 570 100 110 120 130 140 150 mKIAA1 NSSGWDESSKPNSSQGWGDPPKCNQSLGWGDSSKPVSSPDWNKQQDIVGSWGIPPATSKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 NSSGWDESSKPNSSQGWGDPPKCNQSLGWGDSSKPVSSPDWNKQQDIVGSWGIPPATSKP 580 590 600 610 620 630 160 170 180 190 200 210 mKIAA1 PGTGWLGGPIPAPAKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYKNVNMWNKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 PGTGWLGGPIPAPAKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYKNVNMWNKN 640 650 660 670 680 690 220 230 240 250 260 mKIAA1 IPEASGRSDQQAQMHRLLPAASAVSSKETSSGSGKRSRVECRGIVEASFVLTCLS :::::::::::::::::::::::::::::::::: gi|742 IPEASGRSDQQAQMHRLLPAASAVSSKETSSGSGWGEPWAEPSTPATTVDNGTSAWGKPI 700 710 720 730 740 750 gi|742 DSGPSWGEPITAASNASTWGSSSVGPQSLSKSGPKSMQDGWCGDDMPLPGSRPTGWEEEE 760 770 780 790 800 810 >>gi|148685345|gb|EDL17292.1| mCG20982, isoform CRA_c [M (1884 aa) initn: 1766 init1: 1766 opt: 1766 Z-score: 1814.1 bits: 346.2 E(): 2.4e-92 Smith-Waterman score: 1766; 99.590% identity (100.000% similar) in 244 aa overlap (1-244:773-1016) 10 20 30 mKIAA1 SNQWGGCKEDKSAWNDSQKSKQGWGDGQKS ::::::::::::.::::::::::::::::: gi|148 PKPTLRWGDSKGSNCQGGWEDDSAATGMIKSNQWGGCKEDKSTWNDSQKSKQGWGDGQKS 750 760 770 780 790 800 40 50 60 70 80 90 mKIAA1 SQGWSISAGDNWGESSRSNHWGEANKKSSSGGSDSDRSISGWNELGKTSSFTWGNNINPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SQGWSISAGDNWGESSRSNHWGEANKKSSSGGSDSDRSISGWNELGKTSSFTWGNNINPN 810 820 830 840 850 860 100 110 120 130 140 150 mKIAA1 NSSGWDESSKPNSSQGWGDPPKCNQSLGWGDSSKPVSSPDWNKQQDIVGSWGIPPATSKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 NSSGWDESSKPNSSQGWGDPPKCNQSLGWGDSSKPVSSPDWNKQQDIVGSWGIPPATSKP 870 880 890 900 910 920 160 170 180 190 200 210 mKIAA1 PGTGWLGGPIPAPAKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYKNVNMWNKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PGTGWLGGPIPAPAKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYKNVNMWNKN 930 940 950 960 970 980 220 230 240 250 260 mKIAA1 IPEASGRSDQQAQMHRLLPAASAVSSKETSSGSGKRSRVECRGIVEASFVLTCLS :::::::::::::::::::::::::::::::::: gi|148 IPEASGRSDQQAQMHRLLPAASAVSSKETSSGSGWGEPWAEPSTPATTVDNGTSAWGKPI 990 1000 1010 1020 1030 1040 gi|148 DSGPSWGEPITAASNASTWGSSSVGPQSLSKSGPKSMQDGWCGDDMPLPGSRPTGWEEEE 1050 1060 1070 1080 1090 1100 >>gi|148685343|gb|EDL17290.1| mCG20982, isoform CRA_a [M (1892 aa) initn: 1766 init1: 1766 opt: 1766 Z-score: 1814.1 bits: 346.2 E(): 2.4e-92 Smith-Waterman score: 1766; 99.590% identity (100.000% similar) in 244 aa overlap (1-244:792-1035) 10 20 30 mKIAA1 SNQWGGCKEDKSAWNDSQKSKQGWGDGQKS ::::::::::::.::::::::::::::::: gi|148 PKPTLRWGDSKGSNCQGGWEDDSAATGMIKSNQWGGCKEDKSTWNDSQKSKQGWGDGQKS 770 780 790 800 810 820 40 50 60 70 80 90 mKIAA1 SQGWSISAGDNWGESSRSNHWGEANKKSSSGGSDSDRSISGWNELGKTSSFTWGNNINPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SQGWSISAGDNWGESSRSNHWGEANKKSSSGGSDSDRSISGWNELGKTSSFTWGNNINPN 830 840 850 860 870 880 100 110 120 130 140 150 mKIAA1 NSSGWDESSKPNSSQGWGDPPKCNQSLGWGDSSKPVSSPDWNKQQDIVGSWGIPPATSKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 NSSGWDESSKPNSSQGWGDPPKCNQSLGWGDSSKPVSSPDWNKQQDIVGSWGIPPATSKP 890 900 910 920 930 940 160 170 180 190 200 210 mKIAA1 PGTGWLGGPIPAPAKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYKNVNMWNKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PGTGWLGGPIPAPAKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYKNVNMWNKN 950 960 970 980 990 1000 220 230 240 250 260 mKIAA1 IPEASGRSDQQAQMHRLLPAASAVSSKETSSGSGKRSRVECRGIVEASFVLTCLS :::::::::::::::::::::::::::::::::: gi|148 IPEASGRSDQQAQMHRLLPAASAVSSKETSSGSGWGEPWAEPSTPATTVDNGTSAWGKPI 1010 1020 1030 1040 1050 1060 gi|148 DSGPSWGEPITAASNASTWGSSSVGPQSLSKSGPKSMQDGWCGDDMPLPGSRPTGWEEEE 1070 1080 1090 1100 1110 1120 >>gi|148685344|gb|EDL17291.1| mCG20982, isoform CRA_b [M (1893 aa) initn: 1766 init1: 1766 opt: 1766 Z-score: 1814.1 bits: 346.2 E(): 2.5e-92 Smith-Waterman score: 1766; 99.590% identity (100.000% similar) in 244 aa overlap (1-244:793-1036) 10 20 30 mKIAA1 SNQWGGCKEDKSAWNDSQKSKQGWGDGQKS ::::::::::::.::::::::::::::::: gi|148 PKPTLRWGDSKGSNCQGGWEDDSAATGMIKSNQWGGCKEDKSTWNDSQKSKQGWGDGQKS 770 780 790 800 810 820 40 50 60 70 80 90 mKIAA1 SQGWSISAGDNWGESSRSNHWGEANKKSSSGGSDSDRSISGWNELGKTSSFTWGNNINPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SQGWSISAGDNWGESSRSNHWGEANKKSSSGGSDSDRSISGWNELGKTSSFTWGNNINPN 830 840 850 860 870 880 100 110 120 130 140 150 mKIAA1 NSSGWDESSKPNSSQGWGDPPKCNQSLGWGDSSKPVSSPDWNKQQDIVGSWGIPPATSKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 NSSGWDESSKPNSSQGWGDPPKCNQSLGWGDSSKPVSSPDWNKQQDIVGSWGIPPATSKP 890 900 910 920 930 940 160 170 180 190 200 210 mKIAA1 PGTGWLGGPIPAPAKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYKNVNMWNKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PGTGWLGGPIPAPAKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYKNVNMWNKN 950 960 970 980 990 1000 220 230 240 250 260 mKIAA1 IPEASGRSDQQAQMHRLLPAASAVSSKETSSGSGKRSRVECRGIVEASFVLTCLS :::::::::::::::::::::::::::::::::: gi|148 IPEASGRSDQQAQMHRLLPAASAVSSKETSSGSGWGEPWAEPSTPATTVDNGTSAWGKPI 1010 1020 1030 1040 1050 1060 gi|148 DSGPSWGEPITAASNASTWGSSSVGPQSLSKSGPKSMQDGWCGDDMPLPGSRPTGWEEEE 1070 1080 1090 1100 1110 1120 >>gi|117190552|ref|NP_659174.3| trinucleotide repeat con (1896 aa) initn: 1766 init1: 1766 opt: 1766 Z-score: 1814.0 bits: 346.2 E(): 2.5e-92 Smith-Waterman score: 1766; 99.590% identity (100.000% similar) in 244 aa overlap (1-244:801-1044) 10 20 30 mKIAA1 SNQWGGCKEDKSAWNDSQKSKQGWGDGQKS ::::::::::::.::::::::::::::::: gi|117 PKPTLRWGDSKGSNCQGGWEDDSAATGMIKSNQWGGCKEDKSTWNDSQKSKQGWGDGQKS 780 790 800 810 820 830 40 50 60 70 80 90 mKIAA1 SQGWSISAGDNWGESSRSNHWGEANKKSSSGGSDSDRSISGWNELGKTSSFTWGNNINPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 SQGWSISAGDNWGESSRSNHWGEANKKSSSGGSDSDRSISGWNELGKTSSFTWGNNINPN 840 850 860 870 880 890 100 110 120 130 140 150 mKIAA1 NSSGWDESSKPNSSQGWGDPPKCNQSLGWGDSSKPVSSPDWNKQQDIVGSWGIPPATSKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 NSSGWDESSKPNSSQGWGDPPKCNQSLGWGDSSKPVSSPDWNKQQDIVGSWGIPPATSKP 900 910 920 930 940 950 160 170 180 190 200 210 mKIAA1 PGTGWLGGPIPAPAKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYKNVNMWNKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 PGTGWLGGPIPAPAKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYKNVNMWNKN 960 970 980 990 1000 1010 220 230 240 250 260 mKIAA1 IPEASGRSDQQAQMHRLLPAASAVSSKETSSGSGKRSRVECRGIVEASFVLTCLS :::::::::::::::::::::::::::::::::: gi|117 IPEASGRSDQQAQMHRLLPAASAVSSKETSSGSGWGEPWAEPSTPATTVDNGTSAWGKPI 1020 1030 1040 1050 1060 1070 gi|117 DSGPSWGEPITAASNASTWGSSSVGPQSLSKSGPKSMQDGWCGDDMPLPGSRPTGWEEEE 1080 1090 1100 1110 1120 1130 >>gi|74181174|dbj|BAE27849.1| unnamed protein product [M (1896 aa) initn: 1766 init1: 1766 opt: 1766 Z-score: 1814.0 bits: 346.2 E(): 2.5e-92 Smith-Waterman score: 1766; 99.590% identity (100.000% similar) in 244 aa overlap (1-244:801-1044) 10 20 30 mKIAA1 SNQWGGCKEDKSAWNDSQKSKQGWGDGQKS ::::::::::::.::::::::::::::::: gi|741 PKPTLRWGDSKGSNCQGGWEDDSAATGMIKSNQWGGCKEDKSTWNDSQKSKQGWGDGQKS 780 790 800 810 820 830 40 50 60 70 80 90 mKIAA1 SQGWSISAGDNWGESSRSNHWGEANKKSSSGGSDSDRSISGWNELGKTSSFTWGNNINPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 SQGWSISAGDNWGESSRSNHWGEANKKSSSGGSDSDRSISGWNELGKTSSFTWGNNINPN 840 850 860 870 880 890 100 110 120 130 140 150 mKIAA1 NSSGWDESSKPNSSQGWGDPPKCNQSLGWGDSSKPVSSPDWNKQQDIVGSWGIPPATSKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 NSSGWDESSKPNSSQGWGDPPKCNQSLGWGDSSKPVSSPDWNKQQDIVGSWGIPPATSKP 900 910 920 930 940 950 160 170 180 190 200 210 mKIAA1 PGTGWLGGPIPAPAKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYKNVNMWNKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 PGTGWLGGPIPAPAKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYKNVNMWNKN 960 970 980 990 1000 1010 220 230 240 250 260 mKIAA1 IPEASGRSDQQAQMHRLLPAASAVSSKETSSGSGKRSRVECRGIVEASFVLTCLS :::::::::::::::::::::::::::::::::: gi|741 IPEASGRSDQQAQMHRLLPAASAVSSKETSSGSGWGEPWAEPSTPATTVDNGTSAWGKPI 1020 1030 1040 1050 1060 1070 gi|741 DSGPSWGEPITAASNASTWGSSSVGPQSLSKSGPKSMQDGWCGDDMPLPGSRPTGWEEEE 1080 1090 1100 1110 1120 1130 >>gi|148685346|gb|EDL17293.1| mCG20982, isoform CRA_d [M (1937 aa) initn: 1766 init1: 1766 opt: 1766 Z-score: 1813.9 bits: 346.2 E(): 2.5e-92 Smith-Waterman score: 1766; 99.590% identity (100.000% similar) in 244 aa overlap (1-244:793-1036) 10 20 30 mKIAA1 SNQWGGCKEDKSAWNDSQKSKQGWGDGQKS ::::::::::::.::::::::::::::::: gi|148 PKPTLRWGDSKGSNCQGGWEDDSAATGMIKSNQWGGCKEDKSTWNDSQKSKQGWGDGQKS 770 780 790 800 810 820 40 50 60 70 80 90 mKIAA1 SQGWSISAGDNWGESSRSNHWGEANKKSSSGGSDSDRSISGWNELGKTSSFTWGNNINPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SQGWSISAGDNWGESSRSNHWGEANKKSSSGGSDSDRSISGWNELGKTSSFTWGNNINPN 830 840 850 860 870 880 100 110 120 130 140 150 mKIAA1 NSSGWDESSKPNSSQGWGDPPKCNQSLGWGDSSKPVSSPDWNKQQDIVGSWGIPPATSKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 NSSGWDESSKPNSSQGWGDPPKCNQSLGWGDSSKPVSSPDWNKQQDIVGSWGIPPATSKP 890 900 910 920 930 940 160 170 180 190 200 210 mKIAA1 PGTGWLGGPIPAPAKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYKNVNMWNKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PGTGWLGGPIPAPAKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYKNVNMWNKN 950 960 970 980 990 1000 220 230 240 250 260 mKIAA1 IPEASGRSDQQAQMHRLLPAASAVSSKETSSGSGKRSRVECRGIVEASFVLTCLS :::::::::::::::::::::::::::::::::: gi|148 IPEASGRSDQQAQMHRLLPAASAVSSKETSSGSGWGEPWAEPSTPATTVDNGTSAWGKPI 1010 1020 1030 1040 1050 1060 gi|148 DSGPSWGEPITAASNASTWGSSSVGPQSLSKSGPKSMQDGWCGDDMPLPGSRPTGWEEEE 1070 1080 1090 1100 1110 1120 >>gi|148685347|gb|EDL17294.1| mCG20982, isoform CRA_e [M (1953 aa) initn: 1766 init1: 1766 opt: 1766 Z-score: 1813.9 bits: 346.2 E(): 2.5e-92 Smith-Waterman score: 1766; 99.590% identity (100.000% similar) in 244 aa overlap (1-244:793-1036) 10 20 30 mKIAA1 SNQWGGCKEDKSAWNDSQKSKQGWGDGQKS ::::::::::::.::::::::::::::::: gi|148 PKPTLRWGDSKGSNCQGGWEDDSAATGMIKSNQWGGCKEDKSTWNDSQKSKQGWGDGQKS 770 780 790 800 810 820 40 50 60 70 80 90 mKIAA1 SQGWSISAGDNWGESSRSNHWGEANKKSSSGGSDSDRSISGWNELGKTSSFTWGNNINPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SQGWSISAGDNWGESSRSNHWGEANKKSSSGGSDSDRSISGWNELGKTSSFTWGNNINPN 830 840 850 860 870 880 100 110 120 130 140 150 mKIAA1 NSSGWDESSKPNSSQGWGDPPKCNQSLGWGDSSKPVSSPDWNKQQDIVGSWGIPPATSKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 NSSGWDESSKPNSSQGWGDPPKCNQSLGWGDSSKPVSSPDWNKQQDIVGSWGIPPATSKP 890 900 910 920 930 940 160 170 180 190 200 210 mKIAA1 PGTGWLGGPIPAPAKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYKNVNMWNKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PGTGWLGGPIPAPAKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYKNVNMWNKN 950 960 970 980 990 1000 220 230 240 250 260 mKIAA1 IPEASGRSDQQAQMHRLLPAASAVSSKETSSGSGKRSRVECRGIVEASFVLTCLS :::::::::::::::::::::::::::::::::: gi|148 IPEASGRSDQQAQMHRLLPAASAVSSKETSSGSGWGEPWAEPSTPATTVDNGTSAWGKPI 1010 1020 1030 1040 1050 1060 gi|148 DSGPSWGEPITAASNASTWGSSSVGPQSLSKSGPKSMQDGWCGDDMPLPGSRPTGWEEEE 1070 1080 1090 1100 1110 1120 >>gi|149067991|gb|EDM17543.1| trinucleotide repeat conta (1894 aa) initn: 1734 init1: 1734 opt: 1734 Z-score: 1781.2 bits: 340.1 E(): 1.7e-90 Smith-Waterman score: 1734; 97.131% identity (99.590% similar) in 244 aa overlap (1-244:792-1035) 10 20 30 mKIAA1 SNQWGGCKEDKSAWNDSQKSKQGWGDGQKS ::::: :::::::::::::.:::::::::: gi|149 PKPTLRWGDSKGSNCQGGWEDDSAATGMIKSNQWGHCKEDKSAWNDSQKNKQGWGDGQKS 770 780 790 800 810 820 40 50 60 70 80 90 mKIAA1 SQGWSISAGDNWGESSRSNHWGEANKKSSSGGSDSDRSISGWNELGKTSSFTWGNNINPN :::::.::.::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SQGWSVSASDNWGESSRSNHWGEANKKSSSGGSDSDRSISGWNELGKTSSFTWGNNINPN 830 840 850 860 870 880 100 110 120 130 140 150 mKIAA1 NSSGWDESSKPNSSQGWGDPPKCNQSLGWGDSSKPVSSPDWNKQQDIVGSWGIPPATSKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 NSSGWDESSKPNSSQGWGDPPKCNQSLGWGDSSKPVSSPDWNKQQDIVGSWGIPPATSKP 890 900 910 920 930 940 160 170 180 190 200 210 mKIAA1 PGTGWLGGPIPAPAKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYKNVNMWNKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 PGTGWLGGPIPAPAKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYKNVNMWNKN 950 960 970 980 990 1000 220 230 240 250 260 mKIAA1 IPEASGRSDQQAQMHRLLPAASAVSSKETSSGSGKRSRVECRGIVEASFVLTCLS :::.:.:::::::::::::::::.:::::::::: gi|149 IPEGSSRSDQQAQMHRLLPAASAISSKETSSGSGWGEPWAEPSTPATTVDNGTSAWGKPI 1010 1020 1030 1040 1050 1060 gi|149 DSGPSWGEPITAASSASTWGSNSVGPQSLSKSGPKSMQDGWCGEDTPLPGSRPTGWEEEE 1070 1080 1090 1100 1110 1120 >>gi|149067992|gb|EDM17544.1| trinucleotide repeat conta (1904 aa) initn: 1734 init1: 1734 opt: 1734 Z-score: 1781.1 bits: 340.1 E(): 1.7e-90 Smith-Waterman score: 1734; 97.131% identity (99.590% similar) in 244 aa overlap (1-244:802-1045) 10 20 30 mKIAA1 SNQWGGCKEDKSAWNDSQKSKQGWGDGQKS ::::: :::::::::::::.:::::::::: gi|149 PKPTLRWGDSKGSNCQGGWEDDSAATGMIKSNQWGHCKEDKSAWNDSQKNKQGWGDGQKS 780 790 800 810 820 830 40 50 60 70 80 90 mKIAA1 SQGWSISAGDNWGESSRSNHWGEANKKSSSGGSDSDRSISGWNELGKTSSFTWGNNINPN :::::.::.::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SQGWSVSASDNWGESSRSNHWGEANKKSSSGGSDSDRSISGWNELGKTSSFTWGNNINPN 840 850 860 870 880 890 100 110 120 130 140 150 mKIAA1 NSSGWDESSKPNSSQGWGDPPKCNQSLGWGDSSKPVSSPDWNKQQDIVGSWGIPPATSKP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 NSSGWDESSKPNSSQGWGDPPKCNQSLGWGDSSKPVSSPDWNKQQDIVGSWGIPPATSKP 900 910 920 930 940 950 160 170 180 190 200 210 mKIAA1 PGTGWLGGPIPAPAKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYKNVNMWNKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 PGTGWLGGPIPAPAKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYKNVNMWNKN 960 970 980 990 1000 1010 220 230 240 250 260 mKIAA1 IPEASGRSDQQAQMHRLLPAASAVSSKETSSGSGKRSRVECRGIVEASFVLTCLS :::.:.:::::::::::::::::.:::::::::: gi|149 IPEGSSRSDQQAQMHRLLPAASAISSKETSSGSGWGEPWAEPSTPATTVDNGTSAWGKPI 1020 1030 1040 1050 1060 1070 gi|149 DSGPSWGEPITAASSASTWGSNSVGPQSLSKSGPKSMQDGWCGEDTPLPGSRPTGWEEEE 1080 1090 1100 1110 1120 1130 265 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Sat Mar 14 09:24:17 2009 done: Sat Mar 14 09:29:39 2009 Total Scan time: 752.920 Total Display time: 0.110 Function used was FASTA [version 34.26.5 April 26, 2007]