FASTA searches a protein or DNA sequence data bank
 version 3.4t11 Apr 17, 2002
Please cite:
 W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

 ../query/mFLJ00294.ptfa, 163 aa
 vs ./tmplib.26680 library

1768854 residues in  2168 sequences
  Expectation_n fit: rho(ln(x))= 4.7636+/-0.00475; mu= 12.2790+/- 0.319
 mean_var=101.6704+/-23.487, 0's: 0 Z-trim: 1  B-trim: 6 in 1/35
 Lambda= 0.1272

FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2
 join: 36, opt: 24, open/ext: -10/-2, width:  16
The best scores are:                                       opt bits E(2168)
mKIAA0857  ( 1353 res)   mpf00136                  (1353)  199   47 4.7e-06


>>mKIAA0857  ( 1353 res)   mpf00136                       (1353 aa)
 initn: 238 init1: 173 opt: 199  Z-score: 201.1  bits: 46.5 E(): 4.7e-06
Smith-Waterman score: 209;  32.258% identity (35.398% ungapped) in 124 aa overlap (39-152:1225-1347)

       10        20        30        40        50        60        
mFLJ00 QATADVSTSRAENFGKKKPLLQAWVTPSEIHPTPALPSAGAGAAKHRPHPVKPMNTTATK
                                     ::.  : .: . :.  : .:   ..:. ..
mKIAA0 DHAAATPASPLVLLPLETRPAEEPQPSGSPHPVKPLTAAPVEASPDRKQPRTSLSTALSS
         1200      1210      1220      1230      1240      1250    

            70        80        90       100            110        
mFLJ00 -----IANSSLGTATIITENLISEALMKKYQPSDPAF-----AYAQLTHDELIQLVLKQK
             . .: :  ...  . .. ..  : .:.: :       : .::::::: :.:...
mKIAA0 GLERLKTVTSGGIQSVLPASQLGSSVDTK-RPKDSAVLDQSAKYYHLTHDELIGLLLQRE
         1260      1270      1280       1290      1300      1310   

      120       130       140       150       160   
mFLJ00 ETISKKEFQVRELEDYIDNLLVRVMEETPNILRVPAQMGKKAGKM
       . .:... .:.:::.::: ::::.:: .:..:..           
mKIAA0 RELSQRDEHVQELESYIDRLLVRIMETSPTLLQISPGPPK     
          1320      1330      1340      1350        




163 residues in 1 query   sequences
1768854 residues in 2168 library sequences
 Scomplib [34t11]
 start: Mon Mar 27 10:09:09 2006 done: Mon Mar 27 10:09:09 2006
 Scan time:  0.360 Display time:  0.000

Function used was FASTA [version 3.4t11 Apr 17, 2002]