Comparison of KIAA cDNA sequences between mouse and human (FLJ00294)
<<Original sequence data>>
mouse mFLJ00294 (mpm11279) length: 4384 bp, CDS: 2 - 493
human (sh03769) length: 5992 bp, CDS: 2 - 2047
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: 1555 - 1555 1 0 0.0
CDS: 1556 - 2047 408 84 17.1
3'UTR: 2048 - 6437 1954 1571 44.6
amino acid
CDS: 1556 - 2047 135 29 17.7
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
mpm11279 1 .................................................. 1
sh03769 1 AGCAGCTCCCATTTCCACATCCACTCCAATTGAAAGCTGGCCTCTCGTAG 50
A A P I S T S T P I E S W P L V D
51 ----+----*----+----*----+----*----+----*----+----* 100
mpm11279 1 .................................................. 1
sh03769 51 ACAGGGGCCAGGCCAAGTCTGAAGGACCACCCTTGCTCCCTAAGGCAGAG 100
R G Q A K S E G P P L L P K A E
101 ----+----*----+----*----+----*----+----*----+----* 150
mpm11279 1 .................................................. 1
sh03769 101 TTGCAAACTGAGAGTTTAACACCGGTTCCAAATTCTGGTTCTTCTGTCCT 150
L Q T E S L T P V P N S G S S V L
151 ----+----*----+----*----+----*----+----*----+----* 200
mpm11279 1 .................................................. 1
sh03769 151 GGGATCACTTTTCAAACAGCCATCCTTTCCAGCAAATAAAGGGACAGAAG 200
G S L F K Q P S F P A N K G T E D
201 ----+----*----+----*----+----*----+----*----+----* 250
mpm11279 1 .................................................. 1
sh03769 201 ATTCTCTGATGGGCAGGACCCGTGAGACAGGCACAGAGAAGAACACCAGC 250
S L M G R T R E T G T E K N T S
251 ----+----*----+----*----+----*----+----*----+----* 300
mpm11279 1 .................................................. 1
sh03769 251 AGCCTTGAGTTGGAGGAGTCTCTCCCAGAGCAGCCTGAAACAGGGCGACA 300
S L E L E E S L P E Q P E T G R Q
301 ----+----*----+----*----+----*----+----*----+----* 350
mpm11279 1 .................................................. 1
sh03769 301 AGAGGAAGAACTTCCGAGATTCCCCTGCAAAAAACAAGACTACAGCCCAT 350
E E E L P R F P C K K Q D Y S P S
351 ----+----*----+----*----+----*----+----*----+----* 400
mpm11279 1 .................................................. 1
sh03769 351 CATCTGGAGAAGCCCAGGAAGTACCGTTTGCCCTTTCACTCAGCAGTGAT 400
S G E A Q E V P F A L S L S S D
401 ----+----*----+----*----+----*----+----*----+----* 450
mpm11279 1 .................................................. 1
sh03769 401 GGAGCTGTGAGCCCTGTTGGGGAGCTTGCAGCAGGAGGAGACAGAGACTT 450
G A V S P V G E L A A G G D R D L
451 ----+----*----+----*----+----*----+----*----+----* 500
mpm11279 1 .................................................. 1
sh03769 451 GGAGAGTCAGGCTGGGTCTCTTGTGGAGAGCAAAGCCAGGGATGCAGCTG 500
E S Q A G S L V E S K A R D A A E
501 ----+----*----+----*----+----*----+----*----+----* 550
mpm11279 1 .................................................. 1
sh03769 501 AAGAAGTGGCGCCCCCTCTTCCCATGGGAGCATCAGTCCCTTCCATTGAT 550
E V A P P L P M G A S V P S I D
551 ----+----*----+----*----+----*----+----*----+----* 600
mpm11279 1 .................................................. 1
sh03769 551 TCCATGATGCGGAAGCTGGAAGAGATGGGTCTGAACCTCCGCAAGGACCA 600
S M M R K L E E M G L N L R K D Q
601 ----+----*----+----*----+----*----+----*----+----* 650
mpm11279 1 .................................................. 1
sh03769 601 GAAGAAAACCAAGAAGCGTGTGTCATTTTCTGAGCAGCTCTTCACGGAAG 650
K K T K K R V S F S E Q L F T E E
651 ----+----*----+----*----+----*----+----*----+----* 700
mpm11279 1 .................................................. 1
sh03769 651 AGGCAGTGGCGGGGGCTGCCTTGCTGGTGGAAGGACACAGCAGTTGTCCC 700
A V A G A A L L V E G H S S C P
701 ----+----*----+----*----+----*----+----*----+----* 750
mpm11279 1 .................................................. 1
sh03769 701 CAGGAGCTGAACCCTGCATGGTCTGTTGCTGGAAACGCGTCTGACGGAGA 750
Q E L N P A W S V A G N A S D G E
751 ----+----*----+----*----+----*----+----*----+----* 800
mpm11279 1 .................................................. 1
sh03769 751 GCCTCCTGAGTCTCCCCACGCAGAGGACTCAGAAAGGGAATCGGTGACCA 800
P P E S P H A E D S E R E S V T T
801 ----+----*----+----*----+----*----+----*----+----* 850
mpm11279 1 .................................................. 1
sh03769 801 CACCTGGGCCAGCGACGTGTGGTGCGCCAGCCTCCCCAGCGGATCACCTC 850
P G P A T C G A P A S P A D H L
851 ----+----*----+----*----+----*----+----*----+----* 900
mpm11279 1 .................................................. 1
sh03769 851 CTCCTCCCCTCCCAGGAGGAGAGTTTCTCCGAAGTCCCCATGAGTGAAGC 900
L L P S Q E E S F S E V P M S E A
901 ----+----*----+----*----+----*----+----*----+----* 950
mpm11279 1 .................................................. 1
sh03769 901 AAGCTCAGCGAAAGACACTCCACTCTTTAGGATGGAGGGAGAGGATGCCC 950
S S A K D T P L F R M E G E D A L
951 ----+----*----+----*----+----*----+----*----+----* 1000
mpm11279 1 .................................................. 1
sh03769 951 TTGTGACTCAGTATCAGAGCAAAGCCAGTGACCACGAAGGTTTATTGTCT 1000
V T Q Y Q S K A S D H E G L L S
1001 ----+----*----+----*----+----*----+----*----+----* 1050
mpm11279 1 .................................................. 1
sh03769 1001 GACCCCTTGAGTGACCTTCAGTTGGTCTCAGATTTTAAATCTCCAATCAT 1050
D P L S D L Q L V S D F K S P I M
1051 ----+----*----+----*----+----*----+----*----+----* 1100
mpm11279 1 .................................................. 1
sh03769 1051 GGCCGATCTGAACTTAAGCCTTCCTTCCATTCCTGAAGTCGCATCGGATG 1100
A D L N L S L P S I P E V A S D D
1101 ----+----*----+----*----+----*----+----*----+----* 1150
mpm11279 1 .................................................. 1
sh03769 1101 ATGAAAGAATAGATCAGGTTGAAGATGACGGAGATCAGGTTGAAGATGAT 1150
E R I D Q V E D D G D Q V E D D
1151 ----+----*----+----*----+----*----+----*----+----* 1200
mpm11279 1 .................................................. 1
sh03769 1151 GGAGAGACAGCAAAGTCGTCAACTCTGGACATAGGAGCTTTGTCCTTGGG 1200
G E T A K S S T L D I G A L S L G
1201 ----+----*----+----*----+----*----+----*----+----* 1250
mpm11279 1 .................................................. 1
sh03769 1201 CTTGGTAGTCCCCTGTCCTGAGAGGGGAAAGGGGCCCAGTGGCGAGGCAG 1250
L V V P C P E R G K G P S G E A D
1251 ----+----*----+----*----+----*----+----*----+----* 1300
mpm11279 1 .................................................. 1
sh03769 1251 ATAGGTTGGTACTGGGGGAGGGCCTGTGTGATTTCAGGCTGCAAGCACCC 1300
R L V L G E G L C D F R L Q A P
1301 ----+----*----+----*----+----*----+----*----+----* 1350
mpm11279 1 .................................................. 1
sh03769 1301 CAGGCATCTGTGACAGCTCCTTCAGAGCAGACCACAGAGTTCGGAATTCA 1350
Q A S V T A P S E Q T T E F G I H
1351 ----+----*----+----*----+----*----+----*----+----* 1400
mpm11279 1 .................................................. 1
sh03769 1351 CAAACCACATCTTGGCAAGAGCTCAAGCTTGGATAAACAGCTGCCAGGCC 1400
K P H L G K S S S L D K Q L P G P
1401 ----+----*----+----*----+----*----+----*----+----* 1450
mpm11279 1 .................................................. 1
sh03769 1401 CCAGTGGTGGTGAGGAAGAAAAACCGATGGGAAATGGGAGTCCAAGCCCG 1450
S G G E E E K P M G N G S P S P
1451 ----+----*----+----*----+----*----+----*----+----* 1500
mpm11279 1 .................................................. 1
sh03769 1451 CCTCCTGGCACATCCCTGGACAATCCTGTACCCAGCCCCTCCCCTTCTGA 1500
P P G T S L D N P V P S P S P S E
1501 ----+----*----+----*----+----*----+----*----+----* 1550
mpm11279 1 .................................................. 1
sh03769 1501 GATCTTTCCTGTCACACACTCTTTCCCCAGCTCTGCACATTCTGACACTC 1550
I F P V T H S F P S S A H S D T H
1551 ----+----*----+----*----+----*----+----*----+----* 1600
T S E A E S Q K Q A T A D V S
mpm11279 1 ....CACCAGTGAAGCAGAATCGCAAAAACAAGCAACAGCAGACGTCTCC 46
|||||| ||||||||| |||||| |||| |||||||| | ||||
sh03769 1551 ACCACACCAGCACAGCAGAATCTCAAAAAAAAGCCACAGCAGAGGGCTCC 1600
H T S T A E S Q K K A T A E G S
1601 ----+----*----+----*----+----*----+----*----+----* 1650
T S R A E N F G K K K P L L Q A W
mpm11279 47 ACTAGTAGAGCTGAGAATTTTGGCAAGAAGAAGCCACTTCTACAAGCCTG 96
|| |||||| ||| ||||||||||||| ||||||||| || || |||||
sh03769 1601 GCTGGTAGAGTTGAAAATTTTGGCAAGAGGAAGCCACTCCTCCAGGCCTG 1650
A G R V E N F G K R K P L L Q A W
1651 ----+----*----+----*----+----*----+----*----+----* 1700
V T P S E I H P T P A L P S A G A
mpm11279 97 GGTTACACCCTCAGAGATACATCCAACCCCAGCTTTGCCAAGCGCAGGAG 146
||| ||||||| |||| ||||||| | ||||| |||| |||| |||
sh03769 1651 GGTCTCACCCTCGGAGACACATCCAGTCTCAGCTCAGCCAGGCGCTGGAA 1700
V S P S E T H P V S A Q P G A G T
1701 ----+----*----+----*----+----*----+----*----+----* 1750
G A A K H R P H P V K P M N T T
mpm11279 147 CTGGGGCAGCCAAGCACAGGCCTCACCCTGTGAAGCCCATGAACACAACA 196
||||| ||||||||||||| | ||| ||||||||||| ||||| | ||
sh03769 1701 CTGGGTCAGCCAAGCACAGACTTCATCCTGTGAAGCCAATGAATGCCACG 1750
G S A K H R L H P V K P M N A T
1751 ----+----*----+----*----+----*----+----*----+----* 1800
A T K I A N S S L G T A T I I T E
mpm11279 197 GCCACCAAGATTGCAAACTCTAGTTTGGGAACCGCCACCATCATCACTGA 246
||||||||| |||| |||| || |||||||| ||||||||||||| |||
sh03769 1751 GCCACCAAGGTTGCTAACTGCAGCTTGGGAACTGCCACCATCATCAGTGA 1800
A T K V A N C S L G T A T I I S E
1801 ----+----*----+----*----+----*----+----*----+----* 1850
N L I S E A L M K K Y Q P S D P A
mpm11279 247 GAACCTGATCAGCGAGGCCCTCATGAAGAAATACCAGCCCTCGGATCCCG 296
|||| ||| || |||| | | |||||||||||| |||||||| || |
sh03769 1801 GAACTTGAACAATGAGGTCATGATGAAGAAATACAGCCCCTCGGACCCTG 1850
N L N N E V M M K K Y S P S D P A
1851 ----+----*----+----*----+----*----+----*----+----* 1900
F A Y A Q L T H D E L I Q L V L
mpm11279 297 CCTTTGCCTACGCGCAGCTGACCCACGATGAGCTGATCCAGCTAGTCCTC 346
| ||||| || |||||||||||||||||||||||||| ||||| ||||||
sh03769 1851 CATTTGCATATGCGCAGCTGACCCACGATGAGCTGATTCAGCTGGTCCTC 1900
F A Y A Q L T H D E L I Q L V L
1901 ----+----*----+----*----+----*----+----*----+----* 1950
K Q K E T I S K K E F Q V R E L E
mpm11279 347 AAACAGAAGGAGACCATCAGCAAGAAGGAGTTTCAGGTGCGGGAGCTGGA 396
||||||||||| || || |||||||||||||| ||||| || ||||||||
sh03769 1901 AAACAGAAGGAAACGATAAGCAAGAAGGAGTTCCAGGTCCGCGAGCTGGA 1950
K Q K E T I S K K E F Q V R E L E
1951 ----+----*----+----*----+----*----+----*----+----* 2000
D Y I D N L L V R V M E E T P N I
mpm11279 397 GGACTACATCGACAACCTGCTAGTCAGAGTCATGGAGGAGACCCCCAACA 446
|||||||| ||||||||||| ||||| |||||||| || |||||||| |
sh03769 1951 AGACTACATTGACAACCTGCTTGTCAGGGTCATGGAAGAAACCCCCAATA 2000
D Y I D N L L V R V M E E T P N I
2001 ----+----*----+----*----+----*----+----*----+----* 2050
L R V P A Q M G K K A G K M *
mpm11279 447 TCCTCCGAGTGCCGGCGCAGATGGGCAAGAAGGCCGGAAAGATGTAAACT 496
||||||| | ||| | ||| | ||||| || || |||||||||||||
sh03769 2001 TCCTCCGCATCCCGACTCAGGTTGGCAAAAAAGCAGGAAAGATGTAAATC 2050
L R I P T Q V G K K A G K M *
2051 ----+----*----+----*----+----*----+----*----+----* 2100
mpm11279 497 GCGGGAAGGA.....................................GGC 509
||| | |
sh03769 2051 AGCAGAAAAAAAACACCGAGACGTTTCTGTGACTTCACTTTCACCTGCTC 2100
2101 ----+----*----+----*----+----*----+----*----+----* 2150
mpm11279 510 GTGGTCTGAAGGAGGCGTGGTCTCCCTAGTAACTAGCACACCGGTTCCGA 559
|| | ||||| | || | ||| |||| ||| | || |||||
sh03769 2101 CAGGGGTCAAGGA..CTTGCCTTGCCTGATAACCAGCCAGCAGGCTCCGA 2148
2151 ----+----*----+----*----+----*----+----*----+----* 2200
mpm11279 560 A....GGCCTGCTGTGTGCATCATCTCTCAAGAGTTAATTCTCCTAGCTG 605
| || | | ||| ||||||| |||||| | | ||
sh03769 2149 ATCACCATCTCCCTCACATGTTATCCGGCAAGAGTGAATTCTACCA.ATG 2197
2201 ----+----*----+----*----+----*----+----*----+----* 2250
mpm11279 606 AAAACCAGATTAATGATTACAACGAATCTTTTACTATACATCTCCCAGCG 655
|| |||| ||||||||||||| ||||||||||| ||||| ||||| |
sh03769 2198 GAAGCCAGGTTAATGATTACAATTAATCTTTTACTGTACAT.TCCCAAGG 2246
2251 ----+----*----+----*----+----*----+----*----+----* 2300
mpm11279 656 TTTTGTTTTTCAATGCCACTGTGCCTTTGACTACATTGTAAATATCAGAT 705
||| |||| ||||||||||||||||| || | ||||||||||
sh03769 2247 CTTTAGTTTTAAATGCCACTGTGCCTTTAACAAGGTTGTAAATAT..... 2291
2301 ----+----*----+----*----+----*----+----*----+----* 2350
mpm11279 706 TTGATCCGATGTGTTTTAACGCCAGGGTTGTTGCCCTTTGATGCTGAGAT 755
| | | | |||| | ||| | | | | | | |||
sh03769 2292 ...........TTTATGCCCACCAGAGATGTGGTCAT...AAGATCTGAT 2327
2351 ----+----*----+----*----+----*----+----*----+----* 2400
mpm11279 756 CTTCCGGTATGGATCCTCCGTGAAGGCAGGCTCAGGGTGAGATGAGAAAG 805
| | || | || | ||||| | ||
sh03769 2328 CCTG.......................AGCCAGAGATTCAGATGGCACAG 2354
2401 ----+----*----+----*----+----*----+----*----+----* 2450
mpm11279 806 GGACTTTGGGATGTGTGCTGTTTCACCCGCTCTCTTGGCCTTTGAGCACC 855
| | | | |||| | | | | | |||| |
sh03769 2355 GAAGTAT.TCATGTATTTTAACACTGGGGTTTTCTTTCTTT......... 2394
2451 ----+----*----+----*----+----*----+----*----+----* 2500
mpm11279 856 TCGGTTGAGGCACAAGCTCAATTTTTAATTCGG...GTAAACCCGAGGAC 902
|| || | |||| ||| | ||| | | || |
sh03769 2395 ............CATACTGAGATTTTTTTTCAGTATGTATCCTCCAGCTC 2432
2501 ----+----*----+----*----+----*----+----*----+----* 2550
mpm11279 903 TCAAGGGTTGTTTTGGTGAGGGTTGGTTTGGGAGGCGTTGTTCTGTTTTC 952
| || | || | | || || | | | | | | ||
sh03769 2433 TTAAAGCTTACCTGAGAAAGCTTTAAATGAGAAAAGGACCATGCGATT.. 2480
2551 ----+----*----+----*----+----*----+----*----+----* 2600
mpm11279 953 AGGGTGGGGTGTTATGTAGCCCCGGGCTGGGGCTGCTCTTGAACTCACTG 1002
|||| |||||| || | | || ||| |||
sh03769 2481 ..GGTGCTGTGTTACATA..CACATACTTTCTTGGCTTCTGAGTAGCTCA 2526
2601 ----+----*----+----*----+----*----+----*----+----* 2650
mpm11279 1003 TGTACTGAGATTGGCCTTAGATTTCTGACCTTTCTGCCCCCCACTGCCAA 1052
|| | ||||| |||| | | || | || | | |
sh03769 2527 GGTGTGGCTTTTGGCTGCAGATGTTAAATTTTGATACCATGTAAACCTA. 2575
2651 ----+----*----+----*----+----*----+----*----+----* 2700
mpm11279 1053 GTGCTAGGATTACAGCCGTGTTTGATGCCTTCTGGTCGGAGCACGGTTGT 1102
| || | ||| | || | || || || | ||| || | |||
sh03769 2576 ..CCCAGCTTCTCAGACTTGGGTCTTGTTTTTTGATGGGAACAGAGGTGT 2623
2701 ----+----*----+----*----+----*----+----*----+----* 2750
mpm11279 1103 TTACATAAAACCTCTGAGCATGCTTCTTAGATTTT..TGAATATGCCTTT 1150
||| | ||| |||||||| |||| | | ||||||| || ||||||
sh03769 2624 TTAGAGAAAGCCTCTGAGTATGCCTTTCAGATTTTGAACAAGCGGCCTTT 2673
2751 ----+----*----+----*----+----*----+----*----+----* 2800
mpm11279 1151 T.......ACAATTGGCAGTACCCTCTGGCCTTAAAAATATGTTCTCCAT 1193
| | | | | ||| |||| ||||| |||||| |||| | |
sh03769 2674 TCTAAACATCGACTTCTACTACTCTCTAGCCTT.AAAATACCTTCTGCTT 2722
2801 ----+----*----+----*----+----*----+----*----+----* 2850
mpm11279 1194 GGATTGGGGG.....ATATAGCTCAGTGGGTAAGGTGCTTGCACTACAAA 1238
||| ||| || | | || ||| | | || | |
sh03769 2723 AGATCCAGGGCCCTTCTACTGGAGATAGGAAAAGTAGAATTCAGGAATTA 2772
2851 ----+----*----+----*----+----*----+----*----+----* 2900
mpm11279 1239 CCTGATGGTCTCCGTTTGGATTCTTAGCATCTATGCTAAAGCC......A 1282
|| ||| | | | | | || | || | ||||||
sh03769 2773 AAAGAATTACTCTTTATTCAATTTGAGGAACTTGGTGAAAGCCCCTCCTC 2822
2901 ----+----*----+----*----+----*----+----*----+----* 2950
mpm11279 1283 GGAAGAGTGGCATGTGCCTGGGTGGGGGCTGGGCTGGGGGAGGGCAGAGC 1332
| || | || || |||| | | || || || ||
sh03769 2823 TTATGACAGCCAGGTTCCTGCTGGCTAGACCAGCCTATTCAGCGCTTTGC 2872
2951 ----+----*----+----*----+----*----+----*----+----* 3000
mpm11279 1333 CAGGCAGATCTCAGG..GGCTCACTGGAAACTCCAGGTTCAGTGAGGGAC 1380
||| | || | |||| | | | ||| | | |
sh03769 2873 TAGGGGATTGGGTGGTCCACGCACTCGCTAATACAGTTCTCCAGGTGTGG 2922
3001 ----+----*----+----*----+----*----+----*----+----* 3050
mpm11279 1381 AGTCTTAAACAATAAAATGAAAAGCTACCATAGACCTCTGCCCTTCATGT 1430
| | | ||||| || | | ||| |||| || |
sh03769 2923 AATGAT.GTCAATACGATTGCTTGGCCTTTTCCCCCTGTGCCTTTGCTCG 2971
3051 ----+----*----+----*----+----*----+----*----+----* 3100
mpm11279 1431 GGTCACACACACACACACACACACACACACACACACACTGCTCTTTAGGT 1480
| | | | || ||||| || | |||
sh03769 2972 G..............TGCTCTGGTTTCCTCAGCAACACTCCTTGTAAGGG 3007
3101 ----+----*----+----*----+----*----+----*----+----* 3150
mpm11279 1481 CTATAGGGCCATTTCCTGGAGACATGAAAGAACTAAAGAGTCACTTTTCA 1530
| || | | | | | | | |||| | | ||
sh03769 3008 GCAGAGACAGGGTCCACCAACTCCCCA...AGATGAAGAAGCCCCTTCAG 3054
3151 ----+----*----+----*----+----*----+----*----+----* 3200
mpm11279 1531 GGCTGGAGTGATAGTCTAGTGGTTAAGAGCACTCACTGGCTGAACAGTGG 1580
| | | ||| | | | | | | ||||
sh03769 3055 GCCAGTCGTGGTGGCTCATGCCTGTAATCCCAGCACT............. 3091
3201 ----+----*----+----*----+----*----+----*----+----* 3250
mpm11279 1581 ACCAGGTCCAGAGGACTTGGGTTCAATTCCCAGCAACCACATGGTAGCTC 1630
|| | || | ||| | ||
sh03769 3092 ..........................TTGCAAGGCCGAGGAGGGTGGATC 3115
3251 ----+----*----+----*----+----*----+----*----+----* 3300
mpm11279 1631 ACAACTGTCTGTAATTTCTGTTCAAGGGAATCTGACCGTGTCACCCGGAC 1680
|| || | ||| | | ||| || || |||
sh03769 3116 AC.............TTGAGGTCAGGAGTTCGAGAC.....CAGCCTGAC 3147
3301 ----+----*----+----*----+----*----+----*----+----* 3350
mpm11279 1681 ATCCATGCAGACAAAATATCAATACACATAACATTAAATTTAAAAGGAAA 1730
|||| || | ||| ||| | || | ||| |||
sh03769 3148 CAACATGGCGAAACCCCATCTCTACTAAAAATACAAAAATTA........ 3189
3351 ----+----*----+----*----+----*----+----*----+----* 3400
mpm11279 1731 CAGAGAGTCGGTCTCTCCTCTCAGGGTTCGGGGTTCCTGTTGCCCCGCTG 1780
| | || ||| | || ||||| ||
sh03769 3190 ...............GCTTGGCATGGTGGTGCGTGCCTGTAATCC..... 3219
3401 ----+----*----+----*----+----*----+----*----+----* 3450
mpm11279 1781 GCCTTTCCTAGGTGGGGAGGGGACTGAGTTCCTCTACAGCATCTCTGTGA 1830
| | || || || |||| ||| || | | | |
sh03769 3220 .CAGCTACTCGGGAGGCTGGGGCAGGAGAATTGCTTGAACTTGGGAGATG 3268
3451 ----+----*----+----*----+----*----+----*----+----* 3500
mpm11279 1831 GGTGGAGGATGATTTTAGGACCGGGCCTTTG..GCCGTTTCCTGCCATCG 1878
| | | | | || || ||| || | | | ||
sh03769 3269 GAGGCTGCAGCGAGCCAAGATCGTGCCACTGCACTCCAGCCTGGGCAAGA 3318
3501 ----+----*----+----*----+----*----+----*----+----* 3550
mpm11279 1879 GCTTGTCTCAATGGCGTTTCCTGGAAGGGAGTAGACAGTCCACTGATTTC 1928
| || | | | | | || ||| | | | || | | | |
sh03769 3319 GTTTTTTTTTAAGACTCTTAAAAAAAGAGCCTGGGCAATTTTTTTAAGAC 3368
3551 ----+----*----+----*----+----*----+----*----+----* 3600
mpm11279 1929 TCAAGATGAAGGAGGCTCAGGCAGGGGCTGGGTAAGTGCTCAGGGGTAGA 1978
|| | || | | || | | || || |
sh03769 3369 TCTGTCTTAAAAAAAACTAAAAAGAAAAAAAGAAGCCCCTTCACTCTACA 3418
3601 ----+----*----+----*----+----*----+----*----+----* 3650
mpm11279 1979 GCGCCCCAGCCACACGTCAGCGGTAAGGAACAGTTGTGAAGAGCTACAGG 2028
| | | | || | || || | |||| || | |
sh03769 3419 GGGGACAGGAGACCATGGATTGGACCCCAAAGGGATTGAACTGCATCTGC 3468
3651 ----+----*----+----*----+----*----+----*----+----* 3700
mpm11279 2029 ATGGCATCTGCTTCTTTGCTGCTACCTCCTGATTTGGGGAGTTTTGTTGC 2078
||| | || || | |||| |
sh03769 3469 ATGTCTGTCCTTTGAACACTTTCTCTCCCTGCCCAAAAGGAAACCCAAAT 3518
3701 ----+----*----+----*----+----*----+----*----+----* 3750
mpm11279 2079 TGCTATTTTGAGACAGATCTCACTGGCTTTAAGCTTTTCACACATATACA 2128
| | | || || | | || | ||| || |
sh03769 3519 TATTTGTGGGATACTGGGGAAATTGTAGTGAAGGGCTTAA.......... 3558
3751 ----+----*----+----*----+----*----+----*----+----* 3800
mpm11279 2129 CACCCCCACCCCCACCCCCGCCTCAGTTTTTCAAATTTCCAAATACTGGA 2178
|||| | ||| || || |
sh03769 3559 .....................TGTAGTTAATAAAAGTTAAAAGTCAGTAG 3587
3801 ----+----*----+----*----+----*----+----*----+----* 3850
mpm11279 2179 ATTACAGGTATGTGCCACCATTCCTGGTAGATCAATGTATTTTTTTTTTA 2228
| ||||| || || | ||| |||| | |||||||
sh03769 3588 AAAACAGG..TGCCTCAGCCTTC.........AAATGGTTGCTTTTTTT. 3625
3851 ----+----*----+----*----+----*----+----*----+----* 3900
mpm11279 2229 TAAAATGTACACACACACACACATATATATATATACACATATATGCACAC 2278
|| | | ||| ||| | || || | | |
sh03769 3626 ..........CCATTTTCCCTCATGAATAGACTCACCAGCATTTTACCCC 3665
3901 ----+----*----+----*----+----*----+----*----+----* 3950
mpm11279 2279 CTTAATATATATATATATATATACATATATACACACATCTTAAAACACAC 2328
||| |||| | | | | | | | | || | ||
sh03769 3666 CTTGTTATAAAACTGTGCAGAGCAAGAAGATGATACTTATT......TTT 3709
3951 ----+----*----+----*----+----*----+----*----+----* 4000
mpm11279 2329 ACATACGTATATATACATACACATATAGATGCACACCTTAATATATACAC 2378
|| |||| | || | | || || | | || | | ||
sh03769 3710 GAATTTGTATTTTTAAAACTAGATTTATAGACTTTTTTTTTTTTTAACTA 3759
4001 ----+----*----+----*----+----*----+----*----+----* 4050
mpm11279 2379 ACACACACACACACACACACACACACGGCCGCTTTTTCACTAGTAGAGGG 2428
||| | | | | || | | | | |||
sh03769 3760 GGGCACTTGCTTCCTTCTTAGCTAAAAGCACCAGCTGAGATTTTTCAGGT 3809
4051 ----+----*----+----*----+----*----+----*----+----* 4100
mpm11279 2429 AATTCCATTGCTGGTCACCTCATTCTGGAATTAAAATGTTTCATGATTTT 2478
|||| ||| | |||| | | ||||||||| |||||||| | |||
sh03769 3810 AATTTTGTTGTTACTCACTTAAGACTGGAATTAGAATGTTTCTGGTATTT 3859
4101 ----+----*----+----*----+----*----+----*----+----* 4150
mpm11279 2479 TTTTTTTCTTCCTGGTAGTAATAAAAAATCTCACTAAATCTTAACACCTC 2528
| ||| || | || | | ||||||| |||||| ||| |||
sh03769 3860 CTCATTTTTTTCCCTGGCTATGATAGAATCTCATCTAATCTTGACATCTC 3909
4151 ----+----*----+----*----+----*----+----*----+----* 4200
mpm11279 2529 TGCTCAGCGA.....GTCATAGGCCAATGCCGTGGATAGGGTTGCCGTGG 2573
| || | || ||| |||| ||| ||||| | ||| || | |
sh03769 3910 TCCTAGGGGAAGAATATCACAGGCTAATAGCGTGGTTGGGGGTGAAGATG 3959
4201 ----+----*----+----*----+----*----+----*----+----* 4250
mpm11279 2574 ATAGGGTGGGGTAGCGGTGGTTCTCAATGAAGAATCTGTGTGTTCTTATC 2623
|||| || || ||| | ||| ||| ||| |
sh03769 3960 ATAGCAGTTATTAAATCAGG.....AATCTCTTTTATGTATGTCCTTGTT 4004
4251 ----+----*----+----*----+----*----+----*----+----* 4300
mpm11279 2624 ACCCGGAAGGTGAGGAA................................. 2640
|| || | | || |
sh03769 4005 ACATTGAGGTTAAGAGACAAAATCATTGGCAGTGCAATCTCTTTCCAGGA 4054
4301 ----+----*----+----*----+----*----+----*----+----* 4350
mpm11279 2641 ...............CGCTGGTTATACTGCAGCACTTTAATCTGAAGGGC 2675
| |||||||| ||||||||||||||||||
sh03769 4055 TTTCGTTTGCTGTGGCATTGGTTATATCAGAGCACTTTAATCTGAAGGAT 4104
4351 ----+----*----+----*----+----*----+----*----+----* 4400
mpm11279 2676 AAGACTGTAACTTGATTTACCTAACAAGCTGTTGATGATCCACACGTATT 2725
| |||||||||||||||| |||| |||| || || ||| ||| ||||
sh03769 4105 GATACTGTAACTTGATTTATCTAATTAGCTTTTAATTATCTACAGCTATT 4154
4401 ----+----*----+----*----+----*----+----*----+----* 4450
mpm11279 2726 TTTATTT.....AATCTCTCTTACAGTACTAGGGACCACTGTAAATTTCT 2770
|| ||| | |||||| ||||||||| |||||||||||||| |||
sh03769 4155 TTATTTTATTTAATTCTCTCCTACAGTACT.GGGACCACTGTAAACTTC. 4202
4451 ----+----*----+----*----+----*----+----*----+----* 4500
mpm11279 2771 TGAGATGATTTGTATTTTTTTTTTTTAGTGTCATGAAATTCATTAATATG 2820
| |||||| ||||| ||||| ||||| |||||||| ||| | ||
sh03769 4203 TCAGATGACTTGTA.....TTTTTGTAGTGCTATGAAATTTATTTACATA 4247
4501 ----+----*----+----*----+----*----+----*----+----* 4550
mpm11279 2821 CCTATAAAGAAA...CTGTATCCACTTGATCTCTGAAAATGTACATGTAT 2867
| |||||||||| | | | ||||||| ||||||||||||||||||||
sh03769 4248 CTTATAAAGAAAACTGTATGTTCACTTGAACTCTGAAAATGTACATGTAT 4297
4551 ----+----*----+----*----+----*----+----*----+----* 4600
mpm11279 2868 .................................................. 2868
sh03769 4298 GGCTGGACGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCTGA 4347
4601 ----+----*----+----*----+----*----+----*----+----* 4650
mpm11279 2868 .................................................. 2868
sh03769 4348 GGCGGGTGAATCACTTGATTGAGGTCAGGAGTTCGAGACCAGCCTGGCCA 4397
4651 ----+----*----+----*----+----*----+----*----+----* 4700
mpm11279 2868 .................................................. 2868
sh03769 4398 ACATGGCAAAACCCCGTCTCTACTAAAAAATACAGAAATTAGCTGGGTGT 4447
4701 ----+----*----+----*----+----*----+----*----+----* 4750
mpm11279 2868 .................................................. 2868
sh03769 4448 GGTGGCAGACAGCTGTAATCTCAGCTGCTCGGGAGGCTGAGGCACAAGAA 4497
4751 ----+----*----+----*----+----*----+----*----+----* 4800
mpm11279 2868 ............................................ATTTCT 2873
|| |
sh03769 4498 TCGCTTGAGCCAGGGAGGTGGAGGTTGCAGTGAGCTGAGATCACATCATT 4547
4801 ----+----*----+----*----+----*----+----*----+----* 4850
mpm11279 2874 GTTCTGCATCCTGGGGTTTTGGTTTGATTTTTTGT............... 2908
| || || |||||| || || | | | |
sh03769 4548 GCACTCCAGCCTGGGCAACGGGCGAGACTCTGTCTCAAAAAAAAGAAAGA 4597
4851 ----+----*----+----*----+----*----+----*----+----* 4900
mpm11279 2909 .....................TTTGTTTT...TTTTGTTTTTAACTTGAT 2934
||||| | || ||||||| |||||||
sh03769 4598 AAGAAAAGGTACATGTATATATTTGTCCTGCATTATGTTTTTTACTTGAT 4647
4901 ----+----*----+----*----+----*----+----*----+----* 4950
mpm11279 2935 ATAAGTGCATTTTTACTGTGATAACCTAAGTGCACTGGAGCAC....... 2977
|||| || ||||||||||||||| | |||||| |||| | |
sh03769 4648 ATAAATGTATTTTTACTGTGATAGTCCAAGTGCCCTGGGGGGCAGGTGTG 4697
4951 ----+----*----+----*----+----*----+----*----+----* 5000
mpm11279 2978 .................TGCTCAGAAGAGGCAGCCTGGGGAGCTGCCTTG 3010
| | | |||| || | | || |||| ||
sh03769 4698 CTCTATGTGGTTCTTCTTCCATTGGAGAGCTGGCGTAGAGATCTGCAGTG 4747
5001 ----+----*----+----*----+----*----+----*----+----* 5050
mpm11279 3011 TGTATGAAGA.....GTCTGGAGGTCTCTACTGCTACTCAGACCTTTGGT 3055
| | | || || ||||| | ||| |||||| ||||| |||
sh03769 4748 TTCACAAGGATGTTGGTTTGGAGATGTCTGCTGCTA...GGACCTGGGGT 4794
5051 ----+----*----+----*----+----*----+----*----+----* 5100
mpm11279 3056 ATGTAACCGAGTCAGCTCTAGTGAGGACCGTCTAGGT...GAAGTGAATT 3102
||| || |||| | | |||| | ||| ||| | ||| ||||
sh03769 4795 GTGTGACTCAGTC..CATATGAGAGGGACATCTGGGTGGAGGAGTAAATT 4842
5101 ----+----*----+----*----+----*----+----*----+----* 5150
mpm11279 3103 CCTGTGCTCTGAAATGCCACTTGGGGACTCTGGAGAATGAAGGACAGTTT 3152
|||||||||||||||||||||||| ||||||| ||||||||||| ||
sh03769 4843 CCTGTGCTCTGAAATGCCACTTGGTAGCTCTGGACAATGAAGGACAATTG 4892
5151 ----+----*----+----*----+----*----+----*----+----* 5200
mpm11279 3153 ACTTCGGGGGCTTTGCTGGTTTCTGCAG.TGCTGGGAAACACTGC.CTTT 3200
||| ||| | |||| |||||| | |||||||||| | | | |||
sh03769 4893 ACTCAAGGG...TGCCTGGCTTCTGCTGCTGCTGGGAAAAAATTCAGTTT 4939
5201 ----+----*----+----*----+----*----+----*----+----* 5250
mpm11279 3201 CTGACGTTGCTGTACCTCACAAGGTAATAGAGGCCCTG.....CCTACTT 3245
| | || ||| ||||| ||| | |||| |||| | | |
sh03769 4940 ATAGCATTCCTGCACCTCCCAA...AGTAGATAACCTGGAGGTCATTCAG 4986
5251 ----+----*----+----*----+----*----+----*----+----* 5300
mpm11279 3246 ATAATAACTGTTCCTGACTATTTGGTCGGGCACTAAGGAGTGATACCAAC 3295
||| |||||| ||||| | | || | || | | | |
sh03769 4987 TTAACAACTGTCCCTGAGGACTCAGT......TTTGGGGGAGGGGTTATC 5030
5301 ----+----*----+----*----+----*----+----*----+----* 5350
mpm11279 3296 CAAGGGAAGC.CGAACCTGCATTGAGCCACTGGCAGAGGCTGGTGACAGG 3344
| ||||| | |||| ||||||| | | ||| | |||| |
sh03769 5031 TGGGAGAAGCTTTAGCCTGTTCTGAGCCATTAGGAGACATTAGTGAATTG 5080
5351 ----+----*----+----*----+----*----+----*----+----* 5400
mpm11279 3345 GAGAGCCCTGGAG.CTACTGAGGCTGACCTCTGCCT.............. 3379
|||| |||||| | || || ||| || ||
sh03769 5081 ..GAGCACTGGAGAATCCTACAAATGGCCTATGTCTCAGAAGAGCTGGGA 5128
5401 ----+----*----+----*----+----*----+----*----+----* 5450
mpm11279 3380 TGTGCTTGTAGCTTCCACTGATGCCAACTTGAGGTGCCCTGGAGGGGCCT 3429
| ||| |||| | | ||||| || | || ||||| ||
sh03769 5129 CCTCCTTCCAGCTGCTGCAGATGCTGAC....AGGCCCTGGGAGGCTGCT 5174
5451 ----+----*----+----*----+----*----+----*----+----* 5500
mpm11279 3430 ACACTCTGGAGAAAGAAGAGAAGGAAGGGAAGAAAGAAGAAAGAAAGAGC 3479
|||||||||| ||| |||
sh03769 5175 GTGCTCTGGAGAAGCTGGAG..........................CAGC 5198
5501 ----+----*----+----*----+----*----+----*----+----* 5550
mpm11279 3480 CCTTTCCTTGCCCATGCCTGGCTACCTCCAAGAAAGCCCAGCCAGAGATT 3529
| || |||| || |||||||| |||| |||||| ||| ||| || |
sh03769 5199 TCATTTCTTGGCCTAGCCTGGCTGCCTC..AGAAAGAGCAGTCAG.GACT 5245
5551 ----+----*----+----*----+----*----+----*----+----* 5600
mpm11279 3530 TGGGTGGGGTATGAAGGCGTTGGATTAAATACCAGCATACTCCATTTTAG 3579
|| | | | || || ||| ||||| | ||| || || |
sh03769 5246 TGAGGGAAGCATCAA........ATTCTATACCCATAAACTGCAGTT..G 5285
5601 ----+----*----+----*----+----*----+----*----+----* 5650
mpm11279 3580 GACAGCATCCTAAAAACCAGCCAGCCCTTGGCCTAATCGTTTCATATCAT 3629
|| || | | | | | |||| ||| ||| |||||| |||||
sh03769 5286 GAAGTCAGCTTTTTGAAATGTCCAGCCTTTGCCCAATTGTTTCAGATCAT 5335
5651 ----+----*----+----*----+----*----+----*----+----* 5700
mpm11279 3630 CTTAT..CTTTGGCTTCGGCACTTGGCCTGGCTTCCCTGTTTTATTCCAC 3677
|| || || ||||| |||| | |||| | ||| | ||||||||
sh03769 5336 CTCATTCCTCAGGCTTTGGCAGGTATCCTGCCCTCC..ATCTTATTCCAG 5383
5701 ----+----*----+----*----+----*----+----*----+----* 5750
mpm11279 3678 CATATTACCTTTACTTGGGCCACAGAAGGAAGGAGCAAGCAACCCTGCCC 3727
| || | | | ||| |||| | | || || || ||||||
sh03769 5384 TGTGTTCACCTCATCAAGGCAGCAGAGTGGATGAAGGAGTAAGTCTGCCC 5433
5751 ----+----*----+----*----+----*----+----*----+----* 5800
mpm11279 3728 TGTGCCATGCTCCACTGCTGTCCAGCAAGAGAGGCTGGTCCATGACGCTT 3777
| |||||| || || ||||| | | || || | |||
sh03769 5434 TTTGCCATACTGAACAGCTGTGGACCCCGATTGGTGAG.......GGCTC 5476
5801 ----+----*----+----*----+----*----+----*----+----* 5850
mpm11279 3778 CACCGTGCACTGTATCGAGGCTAGAGTTCTCCATCCCTAGGTTCTTCTCC 3827
| |||||| ||| | | | | | | | |
sh03769 5477 TGCATATGCCTGTATGAAGGAGATACAGGTGTGTGTGCACATGCCGGTAT 5526
5851 ----+----*----+----*----+----*----+----*----+----* 5900
mpm11279 3828 CAGTCAACCACACCGCCCCCTTTGGGTGTCTTGTGCTTGCTAATTCCATG 3877
| | ||| | | ||||||| | ||
sh03769 5527 GAAGAAGACAC...............AGGCATGTGCTTCTCAGTT..... 5556
5901 ----+----*----+----*----+----*----+----*----+----* 5950
mpm11279 3878 CTCTGTTGCTGAGTTACACTCTTAGCTGGACCCTCCCCCGAGTTGTGTTT 3927
| | ||| | |||| || | | | | |
sh03769 5557 .........TTGCTAACAGTGGGAGCTCAACGGGGCAGAGGGAGGAAGGT 5597
5951 ----+----*----+----*----+----*----+----*----+----* 6000
mpm11279 3928 CTGTCTTTGTTTTTTGAGACAGTTTCTCATGTGAGCCAGGTTAATCTTGA 3977
| | | | | | ||| | | | ||| || ||||| || |
sh03769 5598 C...CATGATGCTCAGCCACATACTGTAGAGAGAGGCAATTTAATGTTAA 5644
6001 ----+----*----+----*----+----*----+----*----+----* 6050
mpm11279 3978 TTTTATGGCTATTAATGACCTTGAACTCATTATCCTCCTGCCTCTGCCTT 4027
| || || |||||||
sh03769 5645 AT.....................GACGCACCATCCTCC............ 5661
6051 ----+----*----+----*----+----*----+----*----+----* 6100
mpm11279 4028 CTGAGTGCTGGGAATATCAGAGTGTGCTACCATTCACAGCTTTTAATTTT 4077
|| | | || ||| ||| |||| ||||
sh03769 5662 ...............CTCCCACCCTTCTCCCAGTCAACTTTTTTTCTTTT 5696
6101 ----+----*----+----*----+----*----+----*----+----* 6150
mpm11279 4078 TTTTTTCTGAGGGTGGGGGTGGGTACTAATTGAGGATCCTTCAAGACTG. 4126
| | |||||||| ||| ||||| |||
sh03769 5697 TCT...............AGAACTACTAATT....ATCTCTCAAGGCTGA 5727
6151 ----+----*----+----*----+----*----+----*----+----* 6200
mpm11279 4127 AAAATCTATTGTCTTAGATAAGAAGCATGAACCCGGGCTGGAGAGATGGC 4176
||||| |||| ||||| | | | | | ||
sh03769 5728 AAAATTAATTGCCTTAGGTGGAGAACTTAATTCC................ 5761
6201 ----+----*----+----*----+----*----+----*----+----* 6250
mpm11279 4177 TCAGTGGTTAAGAGCTCTGACTGGGGCTGGAGAGATGGCTTAGCAGTTAA 4226
||| | | | ||| | | | |||| | | |
sh03769 5762 .TAGTATCCACCAAACTTAACTCCGTATCTCCATATGGTGTCTC...CAT 5807
6251 ----+----*----+----*----+----*----+----*----+----* 6300
mpm11279 4227 GAGCACTGTCTGATGTTCCGAAGGTCCTGAGTTCAAATCCCAGCAACCAC 4276
||||| ||| | | || |||| | | || ||||
sh03769 5808 ATCTACTGTGTGAGCTACTTAA....CTGACGCCCTCTTCCTCCAACTGA 5853
6301 ----+----*----+----*----+----*----+----*----+----* 6350
mpm11279 4277 ATGGTGGCTCA.............................CAACCATCTG 4297
| | | || || | | |||
sh03769 5854 AGGATCGCCCAACGTTTTTGGATTATAGAATTATTATTTCCTGCTTTCTT 5903
6351 ----+----*----+----*----+----*----+----*----+----* 6400
mpm11279 4298 TAATGAGATCTGATGCCCTCTTCTGGTGTATCTGAAGACAGCTTCAGTGT 4347
| | | || || | | |||| | | | | |
sh03769 5904 TCTTTGGGACTTTTGAATTTCTTTGGTTTCGTTTTTAAGAAGTAACCCAA 5953
6401 ----+----*----+----*----+----*----+---- 6439
mpm11279 4348 GCTTATTTATAATAATAAATAAAATCTTTAAAGAGAG.. 4384
|| || || | |||||||||| |
sh03769 5954 CATTTCCTACAACACTAAATAAAATGGTACTTACCTTTC 5992