Comparison of KIAA cDNA sequences between mouse and human (KIAA1433)

<< Original sequence data >>

mouse  mKIAA1433 (mpm11208)     length:   4834 bp
human   KIAA1433  (hh05535)     length:   5671 bp


<< Aligned sequence information (excl. stop, if exists.) >>

----------------------------------------------------------
            length    #match  #mismatch   %diff
----------------------------------------------------------
DNA

  CDS1 :     1939      1683      256      13.20
  Total:     1939      1683      256      13.20

  3'UTR:     2697      1292     1405      52.09

amino acid

  CDS1 :      647       576       71      10.97
  Total:      647       576       71      10.97
----------------------------------------------------------


<< Alignment region (incl. stop, if exists.) >>

----------------------------------------------------------
                    cDNA      cDNA original    amino acid
----------------------------------------------------------
  CDS1 : mouse   161 -  2101    134 -  2101     10 -   656
         human   149 -  2092    134 -  2092      6 -   653
  3'UTR: mouse  2102 -  4834
         human  2093 -  5671
----------------------------------------------------------


<< Alignment >>

*--[ CDS1 ]--*
             1 ----+----*----+----*----+----*----+----*----+----* 50
            10 A  T  N  Y  Q  T  F  R  M  N  L  E  K  L  S  K  P  26
mpm11208   161 GCCACCAATTATCAGACTTTCAGGATGAATCTGGAAAAACTCAGCAAGCC 210
                |  || |||||||| |||||| |||||||||||||||||||||||||||
hh05535    149 TCTGCCGATTATCAGGCTTTCAAGATGAATCTGGAAAAACTCAGCAAGCC 198
             6 S  A  D  Y  Q  A  F  K  M  N  L  E  K  L  S  K  P  22

            51 ----+----*----+----*----+----*----+----*----+----* 100
            27  E  L  L  T  L  F  S  I  L  E  G  E  L  E  A  R  D 43
mpm11208   211 TGAACTCCTGACACTGTTCAGTATCCTTGAAGGAGAACTTGAAGCAAGAG 260
               ||||||||||||||| || ||||| ||||||||||| ||||||||||| |
hh05535    199 TGAACTCCTGACACTATTTAGTATTCTTGAAGGAGAGCTTGAAGCAAGGG 248
            23  E  L  L  T  L  F  S  I  L  E  G  E  L  E  A  R  D 39

           101 ----+----*----+----*----+----*----+----*----+----* 150
            44   L  V  I  E  A  L  K  A  Q  H  R  D  T  F  I  E   59
mpm11208   261 ACCTTGTTATAGAAGCTTTAAAGGCCCAACACAGAGATACTTTCATTGAA 310
               |||||||||||||||| |||||||||||||||||||||||||||||||||
hh05535    249 ACCTTGTTATAGAAGCCTTAAAGGCCCAACACAGAGATACTTTCATTGAA 298
            40   L  V  I  E  A  L  K  A  Q  H  R  D  T  F  I  E   55

           151 ----+----*----+----*----+----*----+----*----+----* 200
            60 E  R  Y  G  K  Y  N  I  S  D  P  L  M  A  L  Q  R  76
mpm11208   311 GAACGCTATGGAAAATATAACATCAGTGACCCTCTAATGGCTCTTCAGAG 360
               ||||||||||||||||||||||||||||| ||| |||||||||| |||||
hh05535    299 GAACGCTATGGAAAATATAACATCAGTGATCCTTTAATGGCTCTACAGAG 348
            56 E  R  Y  G  K  Y  N  I  S  D  P  L  M  A  L  Q  R  72

           201 ----+----*----+----*----+----*----+----*----+----* 250
            77  D  F  E  T  L  K  E  K  N  D  S  E  K  Q  P  V  C 93
mpm11208   361 AGATTTTGAAACACTGAAGGAGAAAAATGATAGTGAGAAGCAGCCAGTGT 410
               ||||||||||||||||||||||||||||||| | || ||||||||||| |
hh05535    349 AGATTTTGAAACACTGAAGGAGAAAAATGATGGCGAAAAGCAGCCAGTCT 398
            73  D  F  E  T  L  K  E  K  N  D  G  E  K  Q  P  V  C 89

           251 ----+----*----+----*----+----*----+----*----+----* 300
            94   T  N  P  L  S  V  L  K  A  V  M  K  Q  C  K  N   109
mpm11208   411 GCACAAACCCCCTCTCTGTCCTCAAGGCGGTGATGAAGCAGTGCAAGAAC 460
               |||||||||| |||||| | || ||||  |||||||||||||||||||||
hh05535    399 GCACAAACCCACTCTCTATTCTTAAGGTTGTGATGAAGCAGTGCAAGAAC 448
            90   T  N  P  L  S  I  L  K  V  V  M  K  Q  C  K  N   105

           301 ----+----*----+----*----+----*----+----*----+----* 350
           110 M  Q  E  R  M  L  S  Q  L  A  A  A  E  S  R  H  R  126
mpm11208   461 ATGCAGGAGCGCATGCTGTCCCAGCTGGCCGCAGCCGAGAGCAGGCACCG 510
               ||||||||||||||||||||||||||||| || || ||||||||||||||
hh05535    449 ATGCAGGAGCGCATGCTGTCCCAGCTGGCTGCTGCTGAGAGCAGGCACCG 498
           106 M  Q  E  R  M  L  S  Q  L  A  A  A  E  S  R  H  R  122

           351 ----+----*----+----*----+----*----+----*----+----* 400
           127  K  V  I  L  D  L  E  E  E  R  Q  R  H  A  Q  D  T 143
mpm11208   511 CAAGGTGATCCTCGACCTTGAAGAAGAAAGACAGAGGCATGCACAGGACA 560
                ||||||||||| |||||||| |||||||| ||| ||||||||||||| |
hh05535    499 AAAGGTGATCCTAGACCTTGAGGAAGAAAGGCAGCGGCATGCACAGGATA 548
           123  K  V  I  L  D  L  E  E  E  R  Q  R  H  A  Q  D  T 139

           401 ----+----*----+----*----+----*----+----*----+----* 450
           144   A  E  G  D  D  V  T  Y  M  L  E  K  E  R  E  R   159
mpm11208   561 CTGCTGAAGGAGATGATGTCACCTACATGCTGGAGAAGGAGAGGGAGAGA 610
               | ||||||||||||||||||||||||||||| |||||||| || ||||| 
hh05535    549 CGGCTGAAGGAGATGATGTCACCTACATGCTAGAGAAGGAAAGAGAGAGG 598
           140   A  E  G  D  D  V  T  Y  M  L  E  K  E  R  E  R   155

           451 ----+----*----+----*----+----*----+----*----+----* 500
           160 L  T  Q  Q  L  E  F  E  K  S  Q  V  K  K  F  E  K  176
mpm11208   611 CTGACGCAGCAGTTGGAATTTGAGAAGTCCCAAGTGAAAAAGTTTGAAAA 660
               ||||| || |||||||||||||| || |||||||||||||||||||||||
hh05535    599 CTGACTCAACAGTTGGAATTTGAAAAATCCCAAGTGAAAAAGTTTGAAAA 648
           156 L  T  Q  Q  L  E  F  E  K  S  Q  V  K  K  F  E  K  172

           501 ----+----*----+----*----+----*----+----*----+----* 550
           177  E  Q  K  K  L  S  S  Q  L  E  E  E  R  T  R  H  K 193
mpm11208   661 AGAACAAAAGAAGCTGTCCAGTCAGTTGGAGGAGGAGCGCACCCGCCACA 710
               |||||| |||||||| || |||||| |||| ||||||||| |||||||||
hh05535    649 AGAACAGAAGAAGCTCTCTAGTCAGCTGGAAGAGGAGCGCTCCCGCCACA 698
           173  E  Q  K  K  L  S  S  Q  L  E  E  E  R  S  R  H  K 189

           551 ----+----*----+----*----+----*----+----*----+----* 600
           194   Q  L  S  S  M  L  V  L  E  C  R  K  A  T  S  K   209
mpm11208   711 AGCAGCTCTCTTCCATGCTGGTGCTCGAGTGCAGGAAGGCCACTAGCAAG 760
               |||||||||| |||||||| ||||| ||||||| ||| ||||| | ||||
hh05535    699 AGCAGCTCTCATCCATGCTAGTGCTTGAGTGCAAGAAAGCCACCAACAAG 748
           190   Q  L  S  S  M  L  V  L  E  C  K  K  A  T  N  K   205

           601 ----+----*----+----*----+----*----+----*----+----* 650
           210 A  A  E  E  G  Q  K  A  G  E  L  S  L  K  L  D  K  226
mpm11208   761 GCAGCCGAGGAAGGGCAGAAGGCCGGAGAGCTGAGCCTGAAACTGGACAA 810
               |||||||||||||| |||||||| |||||||||||||||||| |||| ||
hh05535    749 GCAGCCGAGGAAGGACAGAAGGCAGGAGAGCTGAGCCTGAAATTGGAGAA 798
           206 A  A  E  E  G  Q  K  A  G  E  L  S  L  K  L  E  K  222

           651 ----+----*----+----*----+----*----+----*----+----* 700
           227  E  K  S  R  A  S  K  L  E  E  E  L  A  A  E  R  K 243
mpm11208   811 GGAGAAGAGCCGGGCGAGCAAGCTAGAGGAAGAGTTGGCAGCCGAGAGGA 860
               |||||||||||||| ||| || || || |||||||||||||| ||||| |
hh05535    799 GGAGAAGAGCCGGGTGAGTAAACTGGAAGAAGAGTTGGCAGCTGAGAGAA 848
           223  E  K  S  R  V  S  K  L  E  E  E  L  A  A  E  R  K 239

           701 ----+----*----+----*----+----*----+----*----+----* 750
           244   R  G  L  Q  T  E  A  Q  V  E  K  Q  L  S  E  F   259
mpm11208   861 AGCGGGGCCTGCAGACGGAGGCCCAGGTGGAGAAGCAGCTGTCTGAGTTC 910
               || | ||| ||||||| ||||||||||| ||||||||| | || ||||| 
hh05535    849 AGAGAGGCTTGCAGACTGAGGCCCAGGTAGAGAAGCAGTTATCAGAGTTT 898
           240   R  G  L  Q  T  E  A  Q  V  E  K  Q  L  S  E  F   255

           751 ----+----*----+----*----+----*----+----*----+----* 800
           260 D  I  E  R  E  Q  L  R  A  K  L  N  R  E  E  N  R  276
mpm11208   911 GATATCGAAAGGGAGCAGCTGAGAGCCAAACTGAACCGAGAGGAGAACCG 960
               || ||||||||||| || |||||||| |||||||||||||| ||||||||
hh05535    899 GACATCGAAAGGGAACAACTGAGAGCAAAACTGAACCGAGAAGAGAACCG 948
           256 D  I  E  R  E  Q  L  R  A  K  L  N  R  E  E  N  R  272

           801 ----+----*----+----*----+----*----+----*----+----* 850
           277  T  R  A  L  K  E  E  V  E  S  L  K  K  L  V  K  D 293
mpm11208   961 GACCCGTGCCCTGAAGGAGGAGGTGGAGAGCCTGAAGAAGCTTGTGAAAG 1010
               ||||    ||||||| || ||  |||| ||  | |||||| | ||||| |
hh05535    949 GACCAAAACCCTGAAAGAAGAAATGGAAAGTTTAAAGAAGATAGTGAAGG 998
           273  T  K  T  L  K  E  E  M  E  S  L  K  K  I  V  K  D 289

           851 ----+----*----+----*----+----*----+----*----+----* 900
           294   L  E  A  A  Q  Q  H  R  S  T  S  E  Q  G  R  E   309
mpm11208  1011 ACCTAGAGGCAGCCCAGCAGCACCGCAGCACCAGTGAGCAGGGCAGGGAG 1060
               ||||||||||  |||| |||||| | ||| | | ||||||    | | | 
hh05535    999 ACCTAGAGGCTTCCCACCAGCACAGTAGCCCTAATGAGCAATTGAAGAAA 1048
           290   L  E  A  S  H  Q  H  S  S  P  N  E  Q  L  K  K   305

           901 ----+----*----+----*----+----*----+----*----+----* 950
           310 P  V  T  M  S  R  G  T  A  T  E  P  P  M  R  V  S  326
mpm11208  1061 CCAGTGACCATGTCCAGAGGCACAGCCACGGAGCCTCCCATGCGAGTGTC 1110
               ||||| ||| |||||| ||||||||| || ||||||| ||||| | ||||
hh05535   1049 CCAGTAACCGTGTCCAAAGGCACAGCAACTGAGCCTCTCATGCTAATGTC 1098
           306 P  V  T  V  S  K  G  T  A  T  E  P  L  M  L  M  S  322

           951 ----+----*----+----*----+----*----+----*----+----* 1000
           327  A  F  C  Q  T  E  S  V  Q  T  E  R  S  H  G  S  V 343
mpm11208  1111 TGCGTTTTGTCAAACAGAGAGTGTTCAGACAGAAAGAAGCCACGGGAGTG 1160
               || |||||| |||||||||||| |||   ||||||||| ||| |||||  
hh05535   1099 TGTGTTTTGCCAAACAGAGAGTTTTCCAGCAGAAAGAACCCATGGGAGCA 1148
           323  V  F  C  Q  T  E  S  F  P  A  E  R  T  H  G  S  N 339

          1001 ----+----*----+----*----+----*----+----*----+----* 1050
           344   I  T  K  L  T  D  T  G  L  P  G  P  T  T  A  A   359
mpm11208  1161 TCATAACCAAGCTGACAGACACTGGTCTTCCAGGTCCCACCACGGCTGCT 1210
                |||| ||||| ||||| ||||||| || || |||||  ||||  |||||
hh05535   1149 ACATAGCCAAGATGACAAACACTGGGCTGCCTGGTCCTGCCACTCCTGCT 1198
           340   I  A  K  M  T  N  T  G  L  P  G  P  A  T  P  A   355

          1051 ----+----*----+----*----+----*----+----*----+----* 1100
           360 Y  S  Y  A  K  A  N  G  H  C  D  P  E  I  Q  T  T  376
mpm11208  1211 TACTCATATGCTAAAGCTAATGGCCACTGTGACCCAGAGATACAGACTAC 1260
               ||||||||||| ||| | |||||||| ||||||||||||||||| |||||
hh05535   1199 TACTCATATGCAAAAACCAATGGCCATTGTGACCCAGAGATACAAACTAC 1248
           356 Y  S  Y  A  K  T  N  G  H  C  D  P  E  I  Q  T  T  372

          1101 ----+----*----+----*----+----*----+----*----+----* 1150
           377  R  E  L  T  S  D  S  S  T  E  N  Q  G  P  P  R  E 393
mpm11208  1261 CAGGGAGTTGACCTCAGACAGCAGCACAGAAAACCAAGGGCCTCCACGGG 1310
               ||||||| ||||  ||| || ||    ||||||||||| |||||||||||
hh05535   1249 CAGGGAGCTGACTGCAGGCAACAATGTAGAAAACCAAGTGCCTCCACGGG 1298
           373  R  E  L  T  A  G  N  N  V  E  N  Q  V  P  P  R  E 389

          1151 ----+----*----+----*----+----*----+----*----+----* 1200
           394   K  S  A  V  A  A  Q  E  K  P  V  E  N  G  G  C   409
mpm11208  1311 AGAAATCTGCAGTAGCGGCTCAGGAGAAACCAGTGGAGAATGGTGGGTGT 1360
               | |||||||  | |  ||| || |||||||||||||||||||||||||||
hh05535   1299 AAAAATCTGTGGCATTGGCCCAAGAGAAACCAGTGGAGAATGGTGGGTGT 1348
           390   K  S  V  A  L  A  Q  E  K  P  V  E  N  G  G  C   405

          1201 ----+----*----+----*----+----*----+----*----+----* 1250
           410 P  V  G  T  E  T  P  V  T  M  P  S  H  L  P  S  S  426
mpm11208  1361 CCTGTAGGAACTGAGACTCCAGTCACGATGCCTAGTCACCTCCCTTCCAG 1410
               ||||| || | ||||||||||||| | ||||| |||| |||| |||||||
hh05535   1349 CCTGTGGGGATTGAGACTCCAGTCCCAATGCCCAGTCCCCTCTCTTCCAG 1398
           406 P  V  G  I  E  T  P  V  P  M  P  S  P  L  S  S  S  422

          1251 ----+----*----+----*----+----*----+----*----+----* 1300
           427  G  S  S  L  S  P  S  S  T  A  S  S  S  L  T  S  S 443
mpm11208  1411 TGGCAGCTCCCTGTCTCCCAGCAGCACAGCCTCTTCCTCTCTGACATCAT 1460
               ||| ||||| ||||||||||||||||| ||||| |||||||| ||||| |
hh05535   1399 TGGGAGCTCACTGTCTCCCAGCAGCACTGCCTCCTCCTCTCTAACATCCT 1448
           423  G  S  S  L  S  P  S  S  T  A  S  S  S  L  T  S  S 439

          1301 ----+----*----+----*----+----*----+----*----+----* 1350
           444   P  C  S  S  P  V  L  T  K  R  L  L  G  S  A  A   459
mpm11208  1461 CTCCTTGCTCCTCCCCAGTTCTAACCAAGCGTCTCTTGGGGTCAGCAGCC 1510
               |||||||||| || || || || || |||||| | ||||||||| |||| 
hh05535   1449 CTCCTTGCTCTTCGCCGGTACTCACTAAGCGTTTATTGGGGTCATCAGCT 1498
           440   P  C  S  S  P  V  L  T  K  R  L  L  G  S  S  A   455

          1351 ----+----*----+----*----+----*----+----*----+----* 1400
           460 S  S  P  G  Y  Q  S  S  Y  Q  V  G  I  N  Q  R  F  476
mpm11208  1511 AGCAGCCCGGGCTACCAGTCTTCCTACCAAGTCGGGATCAACCAGCGCTT 1560
               |||||||| ||||||||||| || |||||||| ||||||||||| || ||
hh05535   1499 AGCAGCCCTGGCTACCAGTCATCGTACCAAGTAGGGATCAACCAACGGTT 1548
           456 S  S  P  G  Y  Q  S  S  Y  Q  V  G  I  N  Q  R  F  472

          1401 ----+----*----+----*----+----*----+----*----+----* 1450
           477  H  A  A  R  H  K  F  Q  S  Q  A  D  Q  D  Q  Q  A 493
mpm11208  1561 CCATGCCGCTCGGCACAAATTTCAGTCCCAGGCGGATCAGGATCAGCAAG 1610
               |||||| ||||| ||||||||||||||||| || |||||||| || ||||
hh05535   1549 CCATGCAGCTCGCCACAAATTTCAGTCCCAAGCAGATCAGGACCAACAAG 1598
           473  H  A  A  R  H  K  F  Q  S  Q  A  D  Q  D  Q  Q  A 489

          1451 ----+----*----+----*----+----*----+----*----+----* 1500
           494   S  G  L  Q  S  P  P  S  R  D  L  S  P  T  L  L   509
mpm11208  1611 CCAGCGGTCTCCAGAGCCCTCCATCCAGGGACCTGTCCCCTACCCTGTTA 1660
               |||| || || ||||||||||||||||||||  | ||||| |||||  ||
hh05535   1599 CCAGTGGCCTACAGAGCCCTCCATCCAGGGATTTATCCCCCACCCTCATA 1648
           490   S  G  L  Q  S  P  P  S  R  D  L  S  P  T  L  I   505

          1501 ----+----*----+----*----+----*----+----*----+----* 1550
           510 D  N  S  A  A  K  Q  L  A  R  N  T  V  T  Q  V  L  526
mpm11208  1661 GACAACTCTGCTGCCAAGCAGCTGGCCCGAAACACAGTCACTCAGGTGCT 1710
               ||||||||||| ||||||||||||||||||||||||||||||||||||||
hh05535   1649 GACAACTCTGCCGCCAAGCAGCTGGCCCGAAACACAGTCACTCAGGTGCT 1698
           506 D  N  S  A  A  K  Q  L  A  R  N  T  V  T  Q  V  L  522

          1551 ----+----*----+----*----+----*----+----*----+----* 1600
           527  S  R  F  T  N  Q  .  G  P  I  K  P  V  S  P  N  S 542
mpm11208  1711 CTCCAGATTCACTAACCAA...GGGCCAATTAAGCCCGTCTCTCCCAACA 1757
               |||||||||||||| ||||   |||||||| ||||| |||||||||||||
hh05535   1699 CTCCAGATTCACTAGCCAACAAGGGCCAATCAAGCCAGTCTCTCCCAACA 1748
           523  S  R  F  T  S  Q  Q  G  P  I  K  P  V  S  P  N  S 539

          1601 ----+----*----+----*----+----*----+----*----+----* 1650
           543   S  P  F  G  T  D  Y  R  N  L  A  S  T  A  S  P   558
mpm11208  1758 GTTCTCCCTTTGGGACAGACTACCGAAATCTGGCCAGCACTGCCAGCCCA 1807
               | ||||||||||| |||||||| |||||||| |||| ||||||||  |||
hh05535   1749 GCTCTCCCTTTGGCACAGACTATCGAAATCTAGCCAACACTGCCAATCCA 1798
           540   S  P  F  G  T  D  Y  R  N  L  A  N  T  A  N  P   555

          1651 ----+----*----+----*----+----*----+----*----+----* 1700
           559 R  G  D  T  S  H  S  P  T  P  G  K  V  S  S  P  L  575
mpm11208  1808 AGAGGTGACACCAGCCATTCACCCACTCCAGGGAAAGTGTCCAGCCCTCT 1857
               ||||||||||| ||||||||||| |||||||||||||||||||| || ||
hh05535   1799 AGAGGTGACACAAGCCATTCACCTACTCCAGGGAAAGTGTCCAGTCCCCT 1848
           556 R  G  D  T  S  H  S  P  T  P  G  K  V  S  S  P  L  572

          1701 ----+----*----+----*----+----*----+----*----+----* 1750
           576  S  P  L  S  P  G  I  K  S  P  T  I  P  R  A  E  R 592
mpm11208  1858 GAGCCCCCTCTCTCCAGGAATCAAGTCCCCAACCATCCCCAGAGCTGAGA 1907
               ||||||||| ||||||||||||||||||||||||||||||||||||||||
hh05535   1849 GAGCCCCCTGTCTCCAGGAATCAAGTCCCCAACCATCCCCAGAGCTGAGA 1898
           573  S  P  L  S  P  G  I  K  S  P  T  I  P  R  A  E  R 589

          1751 ----+----*----+----*----+----*----+----*----+----* 1800
           593   G  N  P  P  P  I  P  P  K  K  P  G  L  T  P  S   608
mpm11208  1908 GAGGAAACCCTCCGCCAATCCCGCCCAAAAAGCCTGGCCTCACCCCTTCG 1957
               ||||||||||||| || ||||| ||||| || ||||||||||||||||| 
hh05535   1899 GAGGAAACCCTCCACCCATCCCACCCAAGAAACCTGGCCTCACCCCTTCT 1948
           590   G  N  P  P  P  I  P  P  K  K  P  G  L  T  P  S   605

          1801 ----+----*----+----*----+----*----+----*----+----* 1850
           609 Q  S  A  T  T  P  V  T  K  T  H  S  Q  A  S  S  L  625
mpm11208  1958 CAGTCTGCCACCACTCCAGTAACCAAGACTCATTCCCAGGCATCCTCCCT 2007
               |  ||||| ||||||||| | ||||| ||||||||||||||| ||||  |
hh05535   1949 CCATCTGCTACCACTCCATTGACCAAAACTCATTCCCAGGCAGCCTCTTT 1998
           606 P  S  A  T  T  P  L  T  K  T  H  S  Q  A  A  S  L  622

          1851 ----+----*----+----*----+----*----+----*----+----* 1900
           626  A  A  T  E  D  L  A  S  S  C  S  P  S  A  V  V  A 642
mpm11208  2008 GGCCGCCACAGAAGACCTCGCCAGCAGCTGCTCCCCCAGTGCCGTGGTGG 2057
               | || |  |||||||||| ||||||||||||||  ||| | | || || |
hh05535   1999 GACCACTGCAGAAGACCTTGCCAGCAGCTGCTCTTCCAATACTGTTGTAG 2048
           623  T  T  A  E  D  L  A  S  S  C  S  S  N  T  V  V  A 639

          1901 ----+----*----+----*----+----*----+----*---- 1944
           643   N  G  K  D  V  E  I  L  L  P  T  S  S  *   656
mpm11208  2058 CCAATGGCAAAGATGTTGAGATACTTTTGCCTACCAGCAGCTAG 2101
               | ||||| || ||||||||| |||||||||||||||||||||||
hh05535   2049 CAAATGGTAAGGATGTTGAGTTACTTTTGCCTACCAGCAGCTAG 2092
           640   N  G  K  D  V  E  L  L  L  P  T  S  S  *   653


*--[ 3'UTR ]--*
             1 ----+----*----+----*----+----*----+----*----+----* 50
mpm11208  2102 TCCCTAGGGCTGAGTCTCCACATTTGACATTCCATCAGACTCGGGCCAAG 2151
               ||||||||   |||||||||| ||||||||||||||||| |  | |||| 
hh05535   2093 TCCCTAGGAGGGAGTCTCCACGTTTGACATTCCATCAGATTTCGTCCAAA 2142

            51 ----+----*----+----*----+----*----+----*----+----* 100
mpm11208  2152 AGCTCAGCGTTAAACCCTGGAGTCAAATCATGTTATTTA.TTTGATAGTA 2200
               ||||||  || | ||    |||||| || |||||||||| ||||||||||
hh05535   2143 AGCTCA..GTCAGACTTCTGAGTCAGATTATGTTATTTATTTTGATAGTA 2190

           101 ----+----*----+----*----+----*----+----*----+----* 150
mpm11208  2201 GCTACAGCCATCTGTATAATACATTCAGTGTATTT.ACCTTTTTG..... 2244
               |||  | |||||||||||||||||| ||| ||||| ||| | |||     
hh05535   2191 GCTGAAACCATCTGTATAATACATTTAGTATATTTCACCATGTTGGCCAG 2240

           151 ----+----*----+----*----+----*----+----*----+----* 200
mpm11208  2245 .................................................. 2245
                                                                 
hh05535   2241 GCTGGTCTTGAACTCCTGACCTCAAGTGGTCTGCCTACCTCGGCCTCCCA 2290

           201 ----+----*----+----*----+----*----+----*----+----* 250
mpm11208  2245 ......................................TATTTTTTTAAG 2256
                                                     || |||||| | 
hh05535   2291 AAGTGCTGGAATTACAGGCGTGAGCATCACGTCTGGCCTAATTTTTTTAA 2340

           251 ----+----*----+----*----+----*----+----*----+----* 300
mpm11208  2257 TAGAAATTGAATACTTTGGATTTTTATGACTCACCTCTTTGTACTAAGCT 2306
               | ||| |    || ||| |   |    ||  |   ||||  | ||| |  
hh05535   2341 TCGAATT....TATTTTTGTAATGATAGATGCTTGTCTTATTCCTAGGGA 2386

           301 ----+----*----+----*----+----*----+----*----+----* 350
mpm11208  2307 AGAAGGGGACCTCATAGACATAGCGCATCTCAAGCTCTGCACTTGCCAGC 2356
               |  |   ||  | || || ||   |   |  ||  |   ||   | |  |
hh05535   2387 AATATTTGAAGTAATTGAGATGCTGTCACCTAAAATAATCAAAAGGCTCC 2436

           351 ----+----*----+----*----+----*----+----*----+----* 400
mpm11208  2357 GTGCTGCGACGAGGCGGCTGACTGGGGACCAGGCGGTGCTACTGCCAGTC 2406
                   |  |   |      | | |   |            ||| |   || 
hh05535   2437 TGATTCAGTTAAAAGAATTCATTTAAG............TACAGAGTGTA 2474

           401 ----+----*----+----*----+----*----+----*----+----* 450
mpm11208  2407 GGGGAGCTAGAATTCATTACTCAGCACTCATTTCAAATTATGCAGAAGCG 2456
                | |||||| |    |  |    |        ||  |   ||  |||   
hh05535   2475 AGCGAGCTACACCAAAGAATGGTGATTAGCGCTCCCAGGGTGGGGAAAAA 2524

           451 ----+----*----+----*----+----*----+----*----+----* 500
mpm11208  2457 GTTCGTGCAGATTTTTATTCCAGATGAACATGTTTTAAAAGTGCCTGAAA 2506
                   |      | | ||  | | ||| |  ||    | |      | | |
hh05535   2525 TGAGGATTGTTTATATAGGCAAAATGGAGGTGCCAAACAGAATTATAACA 2574

           501 ----+----*----+----*----+----*----+----*----+----* 550
mpm11208  2507 TCGCCTGCCACGGGAATGTGATTCTGCGGCAGAAACAAAAGACA.....G 2551
               |         ||| | |  |  ||      ||| |||||    |      
hh05535   2575 T......TTTCGGAACTAAGGCTCATTTAAAGATACAAATTTGATTGGCT 2618

           551 ----+----*----+----*----+----*----+----*----+----* 600
mpm11208  2552 AGCATTTCTTGCAGCAAATGAGATCCTCTGTGAATCTGAATGTCAAAA.. 2599
               |  |||  || ||    | | |||    |     ||    ||| || |  
hh05535   2619 ACTATTGATTACACTTGAAGGGATTTGTTTAACTTCCTTTTGTAAAGAAG 2668

           601 ----+----*----+----*----+----*----+----*----+----* 650
mpm11208  2600 .AACCAACACTGCTTTTAATCCTCTCTGACTGTTTAATGCCAGCTTTGTG 2648
                |||   ||      |   || ||||  | |  || |  | || ||||  
hh05535   2669 TAACAGTCATAAGGATCTCTCATCTCCCAGTCATTTAGTCTAGTTTTGAA 2718

           651 ----+----*----+----*----+----*----+----*----+----* 700
mpm11208  2649 TTCTGAACCGAGGTTTGCATAAGTAGAGTGGAAATCCTTCTGAAGGGCGG 2698
               |   |||  | || |    | | || | |  |  |       || | | |
hh05535   2719 TAAAGAATAGGGGGTCTGGTTAATATA.TACATCTAAACACAAAAGTCAG 2767

           701 ----+----*----+----*----+----*----+----*----+----* 750
mpm11208  2699 GAACTCTGTCAGGCTGAGCTCTGTAAAGCCCTCAAGAAACCCTCCAGAAC 2748
                ||   |   ||    ||   ||| |  |   | ||    |       | 
hh05535   2768 AAAGAATAAAAG...TAGTGATGTTACACGAGCCAGCTGTCAGTGCTTAA 2814

           751 ----+----*----+----*----+----*----+----*----+----* 800
mpm11208  2749 ACTTAGCAGTTGGGGTGCTGATTTTCTTGTGCTTTTGAAAACTTAAGTCA 2798
                 ||  |  ||||  |  ||  |||     |   |  ||   |    || 
hh05535   2815 CTTTTCCCTTTGGCCTAATGCATTTGGAAGGTCCTGAAATTGTATTTTCT 2864

           801 ----+----*----+----*----+----*----+----*----+----* 850
mpm11208  2799 TTCTCCGTTTCC........TGCATCACTTCTTGAGTAGTGAAGTCACGT 2840
               || | | || ||        || |   |||||| ||    |    | |  
hh05535   2865 TTTTACATTGCCTATGTATGTGTAAGTCTTCTTCAGGTCAGTTCACGCTG 2914

           851 ----+----*----+----*----+----*----+----*----+----* 900
mpm11208  2841 CTCCATTCAAATCCACCCTCAAGCAT..CGGCCATGGGAACTTCTGATTC 2888
                |  ||  |  | |     ||  |||       ||| |   || ||  | 
hh05535   2915 TTAAATATACGTGCGTATACATACATACTATGTATGTGCGTTTATGTGTG 2964

           901 ----+----*----+----*----+----*----+----*----+----* 950
mpm11208  2889 TGGTTGCTTTTACTTGAATAG............................. 2909
               |   || ||||  || || ||                             
hh05535   2965 TCTGTGTTTTTTTTTTAACAGACGAAGCTTCACAAAAGATGTCTAAGGTA 3014

           951 ----+----*----+----*----+----*----+----*----+----* 1000
mpm11208  2910 .........................GAAATGACATAATGAACTCTTTATT 2934
                                          || || | | ||   | | | ||
hh05535   3015 AGATCATACTTCATGTATCTACAGCATAAGGAGAAATTGCTTTATGTTTT 3064

          1001 ----+----*----+----*----+----*----+----*----+----* 1050
mpm11208  2935 CTGTGATCAAAAAGCAATAACTTAAA..AGTCAGTCTTTGTAATAC.... 2978
               | |       | ||     ||||| |  | ||| | ||| ||||||    
hh05535   3065 CAGACTGTTGACAGTCGGGACTTATATGATTCATTATTTTTAATACAACT 3114

          1051 ----+----*----+----*----+----*----+----*----+----* 1100
mpm11208  2979 .............................TGTAAGTCAG........... 2988
                                            | ||| | ||           
hh05535   3115 GATACATTTGATTCATTAACACAAAGAGTTCTAATTTAGTTGTCTTTTTT 3164

          1101 ----+----*----+----*----+----*----+----*----+----* 1150
mpm11208  2989 .................................................. 2989
                                                                 
hh05535   3165 TTTTTTTTTGAGACGGGAGTCTTGTTCTGTCACCAGGCTGGAGTGCAGTG 3214

          1151 ----+----*----+----*----+----*----+----*----+----* 1200
mpm11208  2989 .................................................. 2989
                                                                 
hh05535   3215 GCATGATCTCAGCTCACTGCAACTTCTGCCTCCCACGTTCAAGCGATTCC 3264

          1201 ----+----*----+----*----+----*----+----*----+----* 1250
mpm11208  2989 .................................................. 2989
                                                                 
hh05535   3265 CCTGGCTCAGCCTCCGGAGTAGCTGGGACTGCAGACACGTGCCACCACGC 3314

          1251 ----+----*----+----*----+----*----+----*----+----* 1300
mpm11208  2989 .....AATTATACAGATTTTACCAAATTGTTACATTCACTCTCCATGCTG 3033
                    |||| |   |||||||  |||||      |||||  |    ||  
hh05535   3315 TGGCTAATTTTTTGGATTTTAGTAAATTCGGGGTTTCACCGTGTTGGCCA 3364

          1301 ----+----*----+----*----+----*----+----*----+----* 1350
mpm11208  3034 CCAGCACTTCTATCTATGGA.............................. 3053
                 |   | |  |||| | ||                              
hh05535   3365 GGATGGCCTTGATCTGTTGACCTCGTGATCCACCCGCTTTGGCCCCCCGA 3414

          1351 ----+----*----+----*----+----*----+----*----+----* 1400
mpm11208  3054 ...................................ACCAAATGGGCGTAT 3068
                                                   || ||| | | | |
hh05535   3415 AGTGTTGGGATTACAGGTGTGAGCCACCGTGCCTGGCCTAATTGTCATCT 3464

          1401 ----+----*----+----*----+----*----+----*----+----* 1450
mpm11208  3069 ATCTGTATCTGTATAGTACACACCCCTTTTACATG.TTCAGCATTCTCAC 3117
                    ||   |  | |  |   | | |||| || | |||  | ||||   
hh05535   3465 .....TAAAAGCTTGGAGCTTTCTCTTTTTTCAGGCTTCTACTTTCTTTT 3509

          1451 ----+----*----+----*----+----*----+----*----+----* 1500
mpm11208  3118 ACTCAAGCACATAAGTATTAGTGCAATTGTATCTCTGGAGCTTGCAGTGT 3167
                   |  ||||| ||||  ||| |  |||   | ||     ||       
hh05535   3510 CTCTACACACATCAGTAACAGTCCTTTTGGCCCCCT..TAGTTCATTCCC 3557

          1501 ----+----*----+----*----+----*----+----*----+----* 1550
mpm11208  3168 AGCATAAAGGACAAAGTAGAATCAATCGCATGTTAAGATTACCTACCAAA 3217
               |||| |   || ||  ||||||        | | |  |||   ||  |  
hh05535   3558 AGCAGACCAGATAATTTAGAAT........TCTGATAATTTATTATGATG 3599

          1551 ----+----*----+----*----+----*----+----*----+----* 1600
mpm11208  3218 GCAATTAGATGTGACTTGGAGCCAGTCAGTCAACAAAGAAATCCATTTGA 3267
                 | | |   |   ||| ||     | | |      | |    | |||| 
hh05535   3600 AAATTGATGGGGCTCTTAGACTTGATAAATTGGTTTAAATCAGCCTTTG. 3648

          1601 ----+----*----+----*----+----*----+----*----+----* 1650
mpm11208  3268 CAAGGAAGTGGACAATCCCAAACTAAGCTCACATCATCAGCATCATAGGA 3317
               ||||  |||  | |      || | ||  |  |  | ||   ||  || |
hh05535   3649 CAAGTTAGTTCAGA...GATAAATTAGTGCTAAAGAACATATTCTGAGAA 3695

          1651 ----+----*----+----*----+----*----+----*----+----* 1700
mpm11208  3318 AAGCCCATTAAATCGTCCTAGTGCCACAGAACTCA..GCTAGCCATGTGA 3365
               ||||  |     | ||     |  ||      | |   ||     | |  
hh05535   3696 AAGCAGAACTTGTGGTTAACATTGCAAGATTATTATTTCTGTTTTTTTTT 3745

          1701 ----+----*----+----*----+----*----+----*----+----* 1750
mpm11208  3366 GTGAGTGAGACAGCACAGCCCCTCAAGTGCTATCCACTCAGCCATAGCAT 3415
                |   |  ||   |   |    |  | | || |||| |  || | | |||
hh05535   3746 TTATCTTTGAATCCTGTGGGTGTTCATTACTGTCCAAT..GCAAAATCAT 3793

          1751 ----+----*----+----*----+----*----+----*----+----* 1800
mpm11208  3416 CCTAGCCCCGTGTAATGGGGCCACCCCTTTGAGCCCCAGCTCCTGTCATG 3465
               | || |    | |         |||  | | |||        | |  | |
hh05535   3794 CATACCAGTTTTTGCATTTTATACCAGTGTTAGCATGGAACACAGATAAG 3843

          1801 ----+----*----+----*----+----*----+----*----+----* 1850
mpm11208  3466 CAAAAA............................................ 3471
               ||||||                                            
hh05535   3844 CAAAAAAAAAAAGTCATTATTTCACCACTCAGGAATAACCACTGTTAATA 3893

          1851 ----+----*----+----*----+----*----+----*----+----* 1900
mpm11208  3472 ..TTGCAGATGGAGGTTACCAATTCTCTAAACGTTCATGGAATTGAGATT 3519
                 || || ||     ||  ||  | | |   | |   | || |  | |||
hh05535   3894 TGTTACATATATTCTTTTTCACCTGTGTGTGCAT...TTGACTATACATT 3940

          1901 ----+----*----+----*----+----*----+----*----+----* 1950
mpm11208  3520 CCCACAAGAAGATTCTCATTCTGATTTTA.AATGTTTTTTAAATGCTGCT 3568
                 || ||    || || |     ||  ||   ||| | ||   |  | | 
hh05535   3941 TACAAAATGTAATCCTAAAGGAAATACTATTTTGTATCTTGCCTTTTTCA 3990

          1951 ----+----*----+----*----+----*----+----*----+----* 2000
mpm11208  3569 GATTAGACAAACATGGCTGCAAATGACTTTAGCTTGCAGGCTACCAAGCT 3618
                 | | | |   ||   |  || |   | |   || |||  | |||   |
hh05535   3991 ATTAATAAATTGATTTTTAAAATTTCTTCTCATTTTCAGTATGCCACTGT 4040

          2001 ----+----*----+----*----+----*----+----*----+----* 2050
mpm11208  3619 GCAGCCTCTCCCTCC..CTAGAACCTGTGCTGTTTCCCTTGTAGTGAGTT 3666
                 ||  |||   | |  ||   |    |||  | ||   | |      | 
hh05535   4041 CTAGATTCTGGTTACTTCTGCTATTCTTGCCTTCTCATATCTCTGTCCTC 4090

          2051 ----+----*----+----*----+----*----+----*----+----* 2100
mpm11208  3667 TGTACAGACAGAAACCC.............CCAGGCTTCTCCACTGT.GT 3702
               | |     |||| ||||                 | | || || ||| ||
hh05535   4091 TCTCTCATCAGATACCCTTCTGTCAAGGAATATTGATGCTTCAGTGTAGT 4140

          2101 ----+----*----+----*----+----*----+----*----+----* 2150
mpm11208  3703 CAGCTACATCTGACCAAGTCCACAGAGCAGGACAGCCTTGCTCTTGGCAA 3752
               || |||    ||| |   ||       |    |   |||| |||| |  |
hh05535   4141 CATCTA....TGATCTTCTCATTCTGTCTTTTCTTTCTTGGTCTTTGACA 4186

          2151 ----+----*----+----*----+----*----+----*----+----* 2200
mpm11208  3753 GCAGAACC......................CCCGACACACCAGCTCAGGA 3780
                 |||  |                      || | | ||||      | |
hh05535   4187 CTAGATACTCAACATCCCACCCCTAATTTGCCTGCCTCACCCTTGATGAA 4236

          2201 ----+----*----+----*----+----*----+----*----+----* 2250
mpm11208  3781 CACTGGTTACACAGTTTTTTATCCAGAGTAAGAGAGAGG..AAGGCCTTG 3828
                    |||  | ||   |  |  || || |||||||| |       | | 
hh05535   4237 ACTCTGTTCTATAGAGCTAGAAGCACAGCAAGAGAGATGCTTTTTTCCTC 4286

          2251 ----+----*----+----*----+----*----+----*----+----* 2300
mpm11208  3829 GTGTCTTTACATAAA...........TTGTTCTGGCCAGCATCTACCCAG 3867
               |   |||| || |||           |  | |  |  || | |||  |  
hh05535   4287 GATACTTTTCAGAAATGCATTGCACCTAATACCTGGGAGAAGCTATTCTT 4336

          2301 ----+----*----+----*----+----*----+----*----+----* 2350
mpm11208  3868 AAGCC..CCTGGCCTACTGTAACCGTTTATT........GGGAAGGAGAA 3907
                ||||    | |   | || |||| || |||         |  ||  | |
hh05535   4337 TAGCCAAGTTTGTTGAATGAAACCATTCATTCAAAGTACTGTCAGCTGTA 4386

          2351 ----+----*----+----*----+----*----+----*----+----* 2400
mpm11208  3908 TGGGTGATCATTGGAAACACCTGATCATGTTTGCAAAACCAAAGGATTC. 3956
                  ||  |   |        |||||  |  | | |   |  |     || 
hh05535   4387 GCAGTACTTTGTAAGCTTGACTGATTTTCCTGGAACTCCATAGTCTCTCA 4436

          2401 ----+----*----+----*----+----*----+----*----+----* 2450
mpm11208  3957 AGTGGGCCCATTCAGATGAGTCACAAGGAATTAGAAATTGATTTTC.... 4002
               ||| |     |  |  ||  | |  | | ||||   ||  || |||    
hh05535   4437 AGTCGAAATTTGAAATTGCATTAAGATGTATTAAGCATGTATCTTCTATG 4486

          2451 ----+----*----+----*----+----*----+----*----+----* 2500
mpm11208  4003 ..TTCTTGAACCACAGAGCTGAAAACAAAAAGTCTCCCTAATAATTT... 4047
                 || || ||   |  | | ||| ||  |    |    |  ||||||   
hh05535   4487 TATTGTTAAATTCCTAAACAGAATACTGATTAACAAAATGTTAATTTTCA 4536

          2501 ----+----*----+----*----+----*----+----*----+----* 2550
mpm11208  4048 .................AGCTAATAGCTCTTAGTTATATTTTTATTAACC 4080
                                || ||       | |||| |  |||| ||||  
hh05535   4537 GTCGCATACAACTAAGGAGTTATACTAGATAAGTTTTTCTTTTTTTAATG 4586

          2551 ----+----*----+----*----+----*----+----*----+----* 2600
mpm11208  4081 CTTTGAGTCAGTGGGCAAGAGGCAGGTGATTAAAATCTTGGTGGGCAAGT 4130
               ||   |||        || |     |   ||   ||    ||  |    |
hh05535   4587 CTCCTAGT......TGAATACTACTGGTTTTCTGATAGAAGTATGACTTT 4630

          2601 ----+----*----+----*----+----*----+----*----+----* 2650
mpm11208  4131 CAACAACAGGGTATACTGTTGACTCTCCAGCTTACAGTTTAAATGGTTAA 4180
               |   ||  |  ||||||                    ||||||   ||  
hh05535   4631 CTGGAAGTGTTTATACT...................TTTTAAAAAATTTG 4661

          2651 ----+----*----+----*----+----*----+----*----+----* 2700
mpm11208  4181 GGTAAATGCATGACACATGAAAGTGTGGCTGGTGTCTGCTGAAATGATGG 4230
                | |||   || ||  |||   || |      |  ||| | | ||  |  
hh05535   4662 TGAAAACTGATAACCTATGTTTGTTTCATGTCTAACTGATTATATCTTAA 4711

          2701 ----+----*----+----*----+----*----+----*----+----* 2750
mpm11208  4231 AGACATGTGAAACTGTCCCGAGCGATCCTGCATGGAATTTACTCCTATTG 4280
               |  ||  |   |  ||    |   |   ||  ||   |||| || |||| 
hh05535   4712 AAGCAACTACTAAGGTGTTTA.TTAGTTTGTTTGTTTTTTAATCTTATTT 4760

          2751 ----+----*----+----*----+----*----+----*----+----* 2800
mpm11208  4281 CGGA.............................................. 4284
                | |                                              
hh05535   4761 AGCAACAGCCAACTCAGTTTATAAATCCAGAAACACCTGGCTATGTTGGA 4810

          2801 ----+----*----+----*----+----*----+----*----+----* 2850
mpm11208  4285 ............GCCAAAATAGACCAGTGATGATCAAACGCTGAACCTTC 4322
                            ||||   ||  ||  ||  ||||   |   ||     
hh05535   4811 TTTGCAAACCTCCCCAATCAAGTTCACCGAAAATCA...GTGAAAAAAGG 4857

          2851 ----+----*----+----*----+----*----+----*----+----* 2900
mpm11208  4323 TCCTCAGGAGAGACTGCAGGGCCTCAGT..GTTCTTACCTCTCTTGCTTT 4370
               |  | ||   | ||||  ||   || ||  |   |||         ||  
hh05535   4858 TTTTGAGTTCACACTGATGGTGGTCGGTAAGAAATTAATCTATAGTCTCC 4907

          2901 ----+----*----+----*----+----*----+----*----+----* 2950
mpm11208  4371 AAATGGTAATCTTAAAAGCTGTGTTGTGCTCTTCCTCTGTTTGGAGACAG 4420
               || |    |  | || | ||    | | |  |  ||    |  || |  |
hh05535   4908 AACTTACTAAATAAATATCTCCCCTTTCCAATCTCTGGAGTATGATAACG 4957

          2951 ----+----*----+----*----+----*----+----*----+----* 3000
mpm11208  4421 ATATATATAGAGAAAGAGAAATGCTATAGGGGAGTTTATTTCTTGGGGGG 4470
                 |  |||| |||||||| ||   | | |  ||||  | |   | | |  
hh05535   4958 TGACCTATAAAGAAAGAGGAA.AATTTGGCAGAGTCAAATAACTTGAGAA 5006

          3001 ----+----*----+----*----+----*----+----*----+----* 3050
mpm11208  4471 GATGCACTGAACAATATTTCTTTTACAGTATAATACAGGGGTGGGATATG 4520
                 || ||  |   || | | ||    || | | |       |   |   |
hh05535   5007 TTTGAACAAATATATGTGTATTCATTAGAAAATT.....TTTCTCAGGAG 5051

          3051 ----+----*----+----*----+----*----+----*----+----* 3100
mpm11208  4521 CAAAAGAAATGTGTATT..TTTGCTAGTTCCTATCTTCTGAGATAATAAG 4568
               |||||  | | |    |   || ||  ||  ||| |  ||| |   ||  
hh05535   5052 CAAAATTATTTTTCTGTCACTTTCTTATTTATATGTAGTGAAAGTTTACT 5101

          3101 ----+----*----+----*----+----*----+----*----+----* 3150
mpm11208  4569 CACAATCCTGAAATGGATCCAATAATTCAGCTAGATATTATAGATT.... 4614
               ||   |        || ||||| |   |  | ||  ||| |    |    
hh05535   5102 CATTGTGTCAGCTAGGCTCCAAAATGGCCCCCAGTGATTCTTATCTCCTG 5151

          3151 ----+----*----+----*----+----*----+----*----+----* 3200
mpm11208  4615 .................................................. 4615
                                                                 
hh05535   5152 GTATTCACAACTTTCTTGTCCCTTCCTGCATTGAATAGGGTTTTACCTGT 5201

          3201 ----+----*----+----*----+----*----+----*----+----* 3250
mpm11208  4615 ......AGTATTTCAGTTTGCAGTAGATTGTGAGTGTGTGCGCTAAGTAA 4658
                     ||||   || | || ||  ||  |||      |   |||||   
hh05535   5202 GTAGCCAGTAGGACATTGTGGAGATGAAAGTGTTGTCATTTTCTAAGACT 5251

          3251 ----+----*----+----*----+----*----+----*----+----* 3300
mpm11208  4659 AAGTTCCA.......................................... 4666
               | ||   |                                          
hh05535   5252 AGGTCATAAAAGGCATTATGGCCCCCCACCTTGACTCTTCTCAAATTACT 5301

          3301 ----+----*----+----*----+----*----+----*----+----* 3350
mpm11208  4667 .................................................. 4667
                                                                 
hh05535   5302 CACTCTGGAGGAAGCCAGCTGTCATGTCAAGAGAACACTCAAGCAGCCTT 5351

          3351 ----+----*----+----*----+----*----+----*----+----* 3400
mpm11208  4667 .................................................. 4667
                                                                 
hh05535   5352 ACAGGGAAGCCCACCAAGTAAGGAACCAAGGCCTGCCAATGGCTGTGTAA 5401

          3401 ----+----*----+----*----+----*----+----*----+----* 3450
mpm11208  4667 ......................................TGATTCACAATT 4678
                                                      |  |||||  |
hh05535   5402 GTGACCCGTTTCAGAAATATCCTCCAGGCCGGGCATGGCGGCTCACACCT 5451

          3451 ----+----*----+----*----+----*----+----*----+----* 3500
mpm11208  4679 TGGGTATTAACCATATCAAAGAAGCTGTTACTGGTCAGCAGAATCTAATG 4728
                   | ||| |  | |   ||     |  |      ||  |||  | | |
hh05535   5452 GTAATCTTAGCACTTTGGGAGGCCGAGGCAGGCAGGAGTTGAAGATCAGG 5501

          3501 ----+----*----+----*----+----*----+----*----+----* 3550
mpm11208  4729 ATGTG...CTCGGTGTAACACAAGCGTTAACTAAGTCATTAACATTTGTA 4775
                || |   |  |||| ||| |   |  ||   ||   || || | | |  
hh05535   5502 CTGGGCAACATGGTGAAACCCTGTCTCTACAGAAAATATGAAAACTAGCC 5551

          3551 ----+----*----+----*----+----*----+----*----+----* 3600
mpm11208  4776 AGGCCAAGTGCAGAAGTCTTCATTTT........................ 4801
               ||||   |||       | |    ||                        
hh05535   5552 AGGCATGGTGGCATGTACCTGTAGTTCCTCTCACCTGAGTCCAGGAGGTT 5601

          3601 ----+----*----+----*----+----*----+----*----+----* 3650
mpm11208  4802 .....TATAGTAGACTACATTAAAACAAGTTAAATCAT............ 4834
                    |  ||||| ||    | |  | | |  | |||             
hh05535   5602 GGGGCTGCAGTAGGCTGGGATCATGCCACTGCACTCAAGCCTCAAGCCTG 5651

          3651 ----+----*----+----* 3670
mpm11208  4834 .................... 4834
                                   
hh05535   5652 GGTGAATGAAACCTTGTCTC 5671