FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0810.ptfa, 920 aa vs ./tmplib.26680 library 1768097 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 6.8441+/-0.00531; mu= 8.0637+/- 0.354 mean_var=142.9070+/-33.900, 0's: 0 Z-trim: 4 B-trim: 0 in 0/36 Lambda= 0.1073 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0668 ( 739 res) mfj01241 ( 739) 1026 171 5.8e-43 mKIAA4118 ( 248 res) mfj41141 ( 248) 539 95 1.3e-20 >>mKIAA0668 ( 739 res) mfj01241 (739 aa) initn: 1171 init1: 965 opt: 1026 Z-score: 863.7 bits: 170.8 E(): 5.8e-43 Smith-Waterman score: 1139; 37.961% identity (44.172% ungapped) in 569 aa overlap (367-918:232-737) 340 350 360 370 380 390 mKIAA0 HRVAGAMGRLCIYTGDLLVQALRRTRAAGWSVAEAVWSVLWLAVSAPGKAASGTFWWLGS :.: . : .: :. ::. . .::.:. mKIAA0 FFGSSSGYSSEDDLAGYTDSDQHSSGSRLRSAASRAGSFVWTLVTFPGRLFGLLYWWIGT 210 220 230 240 250 260 400 410 420 430 440 mKIAA0 GWYQFVTLISWLNVFLLTRCLR---NICKVFVLLLPLLLLLGAGVSLWGQGNFF-----S ::...: : :.::.::: . :. . . .:: :::: : . : .:. . mKIAA0 TWYRLTTAASLLDVFVLTRSRHFSLNLKSFLWFLLLLLLLTGLTYGAW---HFYPLGLQT 270 280 290 300 310 450 460 470 480 490 500 mKIAA0 LLP-VLNWTAMQPTQRVDDSKGMHRPGPLPPSPPPKVDHKASQWPQESDMGQKVASLSAQ : : :..: : . ... .: .. ::: : :.: : . mKIAA0 LQPAVVSWWAAKESRK---------------QPEVWESRDASQHFQAE---QRVLS---R 320 330 340 350 510 520 530 540 550 560 mKIAA0 CHNHDERL----AELTVLLQKLQIRVDQVDDGREGLSLWVKNVVGQHLQEMGTIEPPDAK :. ..:: :... :: ::..... :.: . . .: . .. .: .. mKIAA0 VHSLERRLEALAADFSSNWQKEAIRLERLEL-RQGAAGHGGGSSLSHEDALSLLEGLVSR 360 370 380 390 400 410 570 580 590 600 610 620 mKIAA0 TDFMTFHHD-HEVRLSNLEDVLRKLTEKSEAIQKELEETKLKAGSRDEEQPLLDRVQHLE . :...: .. ...... : : . . ...: . ..:....: :::.:. mKIAA0 RE-ATLKEDLRRDTVAHIQEELATLRAEHHQDSEDLFKKIVQASQESEA-----RVQQLK 420 430 440 450 460 470 630 640 650 660 670 680 mKIAA0 LELNLLKSQLSDWQHLKTSCEQAGARIQETVQLMFSEDQQGGSLEWLLEKLSSRFVSKDE : .. .::. :: . :..... :. ::.. :: mKIAA0 TEWKV-ESQFPDWIR----------------QFLLGDR---GARSGLLQR--------DE 480 490 500 690 700 710 720 730 mKIAA0 LQVLLHDLELKLLQNITHHITVTGQAPTSEAIVS---AVNQAGISGITEAQAHIIVNNAL ... :..:: :.: :. . :.. . :: .: ... :: :.:: :.: ::..:: mKIAA0 MHAQLQELENKIL---TKMAEMQGKS-AREAAASLGQILQKEGIVGVTEEQVHRIVKQAL 510 520 530 540 550 740 750 760 770 780 790 mKIAA0 KLYSQDKTGMVDFALESGGGSILSTRCSETYETKTALLSLFGVPLWYFSQSPRVVIQPDI . ::.:. ::::.::::::.:..:::::::::::::::::::.:::: ::::::..:::. mKIAA0 QRYSEDRIGMVDYALESGGASVISTRCSETYETKTALLSLFGIPLWYHSQSPRVILQPDV 560 570 580 590 600 610 800 810 820 830 840 850 mKIAA0 YPGNCWAFKGSQGYLVVRLSMKIYPTTFTMEHIPKTLSPTGNISSAPKDFAVYGLETEYQ .:::::::.: ::. ::::: .: ::. :.::.::.:::...:::::::::..:.. . : mKIAA0 HPGNCWAFQGPQGFAVVRLSARIRPTAVTLEHVPKALSPNSTISSAPKDFAIFGFDEDLQ 620 630 640 650 660 670 860 870 880 890 900 910 mKIAA0 EEGQPLGRFTYDQEGDSLQMFHTLERPDQAFQIVELRVLSNWGHPEYTCLYRFRVHGEPI .:: :: :.:::.:. .: :. ..:.::::.:.:::::::::.::::::::: mKIAA0 QEGTLLGTFAYDQDGEPIQTFYFQASKMATYQVVELRILTNWGHPEYTCIYRFRVHGEPA 680 690 700 710 720 730 920 mKIAA0 Q mKIAA0 H >>mKIAA4118 ( 248 res) mfj41141 (248 aa) initn: 543 init1: 320 opt: 539 Z-score: 462.6 bits: 95.0 E(): 1.3e-20 Smith-Waterman score: 539; 34.783% identity (35.242% ungapped) in 230 aa overlap (688-916:2-229) 660 670 680 690 700 710 mKIAA0 SEDQQGGSLEWLLEKLSSRFVSKDELQVLLHDLELKLLQNITHHITVTGQAPTS-EAIVS : .: .. :.. :: . .: .. mKIAA4 PHGTHLPNYSQYHHRVHSQGQQLQQLQAELN 10 20 30 720 730 740 750 760 770 mKIAA0 AVNQAGISGITEAQAHIIVNNALKLYSQDKTGMVDFALESGGGSILSTRCSETYETKTAL ... .:.. :... ... ... ..: . :.:: : :.:: . : :: ... mKIAA4 KLHKE-VSSVRAAHSERVAKLVFQRLNEDFVRKPDYALSSVGASIDLEKTSSDYEDQNTA 40 50 60 70 80 90 780 790 800 810 820 830 mKIAA0 LSLFGVPLWYFSQSPRVVIQPDIYPGNCWAFKGSQGYLVVRLSMKIYPTTFTMEHIPKTL . .: ... : :...::..:::::::.:..: .:.:: .. . .:..: : :. mKIAA4 YFWNRLSFWNYARPPSVILEPDVFPGNCWAFEGDKGQVVIRLPGHVQLSDITLQHPPPTV 100 110 120 130 140 150 840 850 860 870 880 890 mKIAA0 SPTGNISSAPKDFAVYGLETEYQEEGQPLGRFTYDQEGDSLQMFHTLERPDQAFQIVELR . ::. ::::.:::::::... . : ::.: .: . . .: :: . : .:: :... mKIAA4 AHTGGASSAPRDFAVYGLQADDETE-VFLGKFIFDVQKSEIQTFHLQNDPPSAFPKVKIQ 160 170 180 190 200 900 910 920 mKIAA0 VLSNWGHPEYTCLYRFRVHGEPIQ .:::::::..::::: :.:: mKIAA4 ILSNWGHPRFTCLYRVRAHGVRTSEWADDNATGVTGGPH 210 220 230 240 920 residues in 1 query sequences 1768097 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:29:14 2006 done: Mon Mar 27 10:29:15 2006 Scan time: 1.020 Display time: 0.060 Function used was FASTA [version 3.4t11 Apr 17, 2002]