FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1522.ptfa, 1048 aa vs ./tmplib.26680 library 1767969 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 16.3006+/-0.0111; mu= -35.6550+/- 0.731 mean_var=785.9782+/-190.182, 0's: 0 Z-trim: 24 B-trim: 0 in 0/36 Lambda= 0.0457 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0458 ( 882 res) mbg00904 ( 882) 399 42 0.00044 mKIAA1076 ( 855 res) mbh01320 ( 855) 352 39 0.0037 >>mKIAA0458 ( 882 res) mbg00904 (882 aa) initn: 232 init1: 111 opt: 399 Z-score: 165.6 bits: 42.0 E(): 0.00044 Smith-Waterman score: 433; 27.425% identity (33.258% ungapped) in 536 aa overlap (437-951:7-469) 410 420 430 440 450 460 mKIAA1 SSKGGSEGQPEGSVASNNVAPPPPGGSGRGSPSGGSTAETSDTASIRSSGQLSGRSVSLR ::: : .:.::. :. . :. . .... mKIAA0 EISRPNSPSEGE-GESSDSRSVNDEGSSDPKDIDQD 10 20 30 470 480 490 500 510 mKIAA1 KMKRPP--PPPRRTYS------LHQRGSAVP---DGPLGLPPKPERKQQPQLPRPPTAGG . . : : :. . : .: .: : ..: : : : :. :: : mKIAA0 NRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPSGAASAPSTAP-PGTPQLPTQGP 40 50 60 70 80 90 520 530 540 550 560 570 mKIAA1 SSGVGAVSCPPSSAGTWGSGLSPGGSRRPPRSPERTLSPSSGYSSQSGTPTLPPKGLAVA . .. :: ::.. ::. :. :: . . :..:.. :.. ::: : : . mKIAA0 TPSATAV--PPQG--------SPATSQ-PPNQTQSTVAPAAHTHIQQA-PTLHPPRLP-S 100 110 120 130 140 580 590 600 610 620 630 mKIAA1 PASPGKAQPPKPDRVTSLRSPGASVSSSLTSLCSSSSDPTPLD-RSGPQMSTPLSDRFVI : : . . :.. .. : :. .. . : : . ..:: .. mKIAA0 PHPPLQPMTAPPSQSSAQPHPQPSLHGQ--------GPPGPHSLQTGPLLQ--------- 150 160 170 180 640 650 660 670 680 690 mKIAA1 PPHPKVPAPFSPPPSKSKSSNQAAPVLAAPAVAPGQVSTIDTSPASPSMPQTTLTPAQE- :: : ::. : :. :. .:. .::.: . :::. ::: : : : .. mKIAA0 --HPGPPQPFGLP---SQPSQGQGPLGPSPAAAHPH-STIQL-PASQSALQPQQPPREQP 190 200 210 220 230 700 710 720 730 740 750 mKIAA1 ---SPVASKDESPPPSPPPSYHPPPPPTKKPEVLEEAPPPPEAAVEILPDPSWPPPPPPA .:.: .:::. : : : :.: : . : : . :: : : : . mKIAA0 LPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHL--SGPSPFSLNANLPPP--PALKPLS 240 250 260 270 280 290 760 770 780 790 800 mKIAA1 PEEQDLSMADFPPPEEVFFNAGPELGPLESCSSEAAVPPAASLSQT-PPPAPP-PSSGSE . ::: ... :. :: : .. ::. . ::. :::: :..: mKIAA0 SLSTHHPPSAHPPPLQLM----PQSQPLPSSPAQ---PPGLTQSQSLPPPAASHPTTG-- 300 310 320 330 340 810 820 830 840 850 860 mKIAA1 PLARLPQKDSVGKHSGAPREDSGTPLVTPSLLQMVRLRSVGASTGIPNPSPGSSAPQKPL : ..:... .: .: .: : .:: :. : .:.::. : : mKIAA0 -LHQVPSQSPFPQHPFVP---GGPPPITPPSCP---------PTSTPPAGPSSSS-QPPC 350 360 370 380 390 870 880 890 900 910 920 mKIAA1 RRALSGRASPVTAPSSGLHAAVRLKASSLAASESPASALPTG-IPEAEPRSPQSP--ASK :.:. .: ::: : ::..: .: .: : : : : :: ..: ::. mKIAA0 SAAVSSGGSVPGAPSCPL-PAVQIKEEALDEAEEPESPPPPPRSPSPEPTVVDTPSHASQ 400 410 420 430 440 930 940 950 960 970 980 mKIAA1 ASFIFSKGTKKLQLERPVSPEAQADLQRNLVAELRSISEHRPPPQAQKKPSKAPPPVARK .. ... .:.: . :..:: mKIAA0 SARFYK------HLDRGYNSCARTDLYFMPLAGSKLAKKREEAIEKAKREAEQKAREERE 450 460 470 480 490 500 >>mKIAA1076 ( 855 res) mbh01320 (855 aa) initn: 180 init1: 139 opt: 352 Z-score: 149.0 bits: 38.9 E(): 0.0037 Smith-Waterman score: 362; 27.331% identity (32.494% ungapped) in 472 aa overlap (427-873:141-562) 400 410 420 430 440 450 mKIAA1 ETIVSDGSTLSSKGGSEGQPEGSVASNNVAPPPPGGSGR--GSPSGGSTAETSDTASIRS :: : :. . ::: . ... mKIAA1 PMRESLGTEEEVDIEAEDEVPEMQAPELEEPPLPMGARKLEGSPEPPEEPGPNTQGDMLL 120 130 140 150 160 170 460 470 480 490 500 510 mKIAA1 SGQLSGRSVSLRKMKRPPPP-PRRTYSLHQRGSAVPDGPLGLPPKPERKQQPQLPRPPTA : .: .: . .. :: :. ... . . . :: :: : :.: :::. mKIAA1 SPELPARETEEAQLPSPPEHGPESDLDMEPEPPPMLSLPLQ-PPLPP----PRLLRPPSP 180 190 200 210 220 520 530 540 550 560 570 mKIAA1 GGSSGVGAVSCPPSSAGTWGSGLSPGGSRRPPRSPERTLSPSSGYSSQSGTPTLPPKGLA . :: : : .:::.: : ... :... mKIAA1 PPEPETPEPPKPPVP-------LEPPPEDHPPRTPGLCGSLAKSQSTET----------- 230 240 250 260 580 590 600 610 620 630 mKIAA1 VAPASPGKAQPPKPDRVTSLRSPGASVSS-SLTSLCSSSSDPTPLDRSGPQMSTPLSDRF .::.:: ..:: : : : :.:: .. . : .:.: :: :: : mKIAA1 -VPATPG-GEPP-----LSGGSSGLSLSSPQVPGSPFSYPSPSPGLSSGGLPRTPGRDFS 270 280 290 300 310 320 640 650 660 670 680 mKIAA1 VIP--PHPKVPA--PFSPPPSKSKSSNQAAPVLAAPAVAPGQVSTIDTSPASPSMPQTTL : :.:. : : : :. .. .....: ::.:.. . : : .: mKIAA1 FTPTFPEPSGPLLLPVCPLPT-GRRDERTGP-LASPVL----LETGLPLPLPLPLPLPLA 330 340 350 360 370 690 700 710 720 730 740 mKIAA1 TPAQESPVASKDESPPPSPPP----SYHPPPPPTK-KPEVLEEAPPPPEAAVEILPDPSW :. :: . :::. :: . : : : : :: ...:: .. : : mKIAA1 LPV---PVLRAQPRPPPQLPPLLPATLAPCPTPIKRKPGRPRRSPP----SMLSLDGPLV 380 390 400 410 420 750 760 770 780 790 800 mKIAA1 PPPPPPAPEEQDLSMADFPPPEEVFFNA-GPELGPLESCSSEAAVPPAASLSQTPPPAPP ::: :: .:: . :: .: .: :. :. .. .:: : ::: :: mKIAA1 RPPPGPA-LGRDLLLLPGQPPAPIFPSAHDPRAVTLDFRNTGIPAPPPPLPPQPPPPPPP 430 440 450 460 470 480 810 820 830 840 850 mKIAA1 PS--SGSEPLARLP-QKDSVGKHSGAPREDSGTPLVTPSLLQMVRLRSV--------GAS : : . :. .: : : . : ::.: :: ......:. . mKIAA1 PPVESTKLPFKELDNQWPSEAIPPG-PRRDE----VTEEYVDLAKVRGPWRRPPKKRHED 490 500 510 520 530 540 860 870 880 890 900 910 mKIAA1 TGIPNPSPGSSAPQKPLRRALSGRASPVTAPSSGLHAAVRLKASSLAASESPASALPTGI :. :: : :: :: : : mKIAA1 LVAPSASPEPSPPQ-PLFRPRSEFEEMTILYDIWNGGIDEEDIRFLCVTYERLLQQDNGM 550 560 570 580 590 600 1048 residues in 1 query sequences 1767969 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:47:15 2006 done: Mon Mar 27 10:47:16 2006 Scan time: 1.140 Display time: 0.080 Function used was FASTA [version 3.4t11 Apr 17, 2002]