FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1798.ptfa, 761 aa vs ./tmplib.26680 library 1768256 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 12.1376+/-0.00896; mu= -18.9871+/- 0.591 mean_var=494.3222+/-120.074, 0's: 0 Z-trim: 13 B-trim: 0 in 0/36 Lambda= 0.0577 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0681 ( 826 res) mzz00001 ( 826) 1684 155 2.9e-38 mFLJ00162 ( 718 res) mej01253 ( 718) 653 69 1.8e-12 mKIAA1617 ( 948 res) mbp18039 ( 948) 376 46 1.9e-05 mKIAA0192 ( 1146 res) msp04171 (1146) 309 41 0.001 mFLJ00386 ( 769 res) mbe05021 ( 769) 295 39 0.0017 >>mKIAA0681 ( 826 res) mzz00001 (826 aa) initn: 1987 init1: 1602 opt: 1684 Z-score: 779.3 bits: 155.0 E(): 2.9e-38 Smith-Waterman score: 1918; 42.989% identity (51.181% ungapped) in 756 aa overlap (3-754:184-822) 10 20 30 mKIAA1 CCQYGNGDECLSGGKYCSQNCARYAKDKDQKD : ..: . :.: ::: . . . mKIAA0 HPDVHQDRQDITSLEPPVDASSCKCQACGPQQSSGLDVGSSGDRCSQPFQKRSVIVE--- 160 170 180 190 200 210 40 50 60 70 80 90 mKIAA1 ERDGGEDNDEEDPKCSRKKKPKLSLKADSKDDGEERDDEMENKQDGRILRGSQRARRKRR ..: : : .:.: : . .. .:: . : .. .:. ..: mKIAA0 --NSGCTIASELLKPMKKRKHK-----EYQSPSEESEPEAVKQGEGK---DAEREPTPST 220 230 240 250 260 100 110 120 130 140 150 mKIAA1 GDSAVLK--QGLPPKGKKTWCWASYLEEEKAVAVPTKLFKEHQSFPYNKNGFKVGMKLEG .. . : . . : : : :::::.:::..:..::.. :. .::::::.:::::: mKIAA0 PENEEWSRSQLVSSEKKDGWSWESYLEEQKAVTAPVSLFQDSQAVTHNKNGFKLGMKLEG 270 280 290 300 310 320 160 170 180 190 200 210 mKIAA1 VDPDHQAMYCVLTVAEVCGYRIKLHFDGYSDCYDFWVNADALDIHPVGWCEKTGHKLRPP .::.: .:: .::::::::::..:::::::.:.::::::.. ::::.:: :::::::. : mKIAA0 IDPQHPSMYFILTVAEVCGYRLRLHFDGYSECHDFWVNANSPDIHPAGWFEKTGHKLQLP 330 340 350 360 370 380 220 230 240 250 260 270 mKIAA1 KGYKEEEFNWQSYLKTCKAQAAPKSLFENQNITVIPSGFRVGMKLEAADKKSPSVICVAT ::::::::.:..::.. ::::::: :: .:. .. : ::.:::::::.:. .::..:::. mKIAA0 KGYKEEEFSWSQYLRSTKAQAAPKHLFVSQSHSTPPVGFQVGMKLEAVDRMNPSLVCVAS 390 400 410 420 430 440 280 290 300 310 320 330 mKIAA1 VTDMVDNRFLVHFDNWDESYDYWCESNSPHIHPVGWCKEHRRTLITPPGYSHVKHFSWDK :::.::.:::::::.: ..:::::. .::.:::::::... . : : : : :.: mKIAA0 VTDVVDSRFLVHFDDWGDTYDYWCDPSSPYIHPVGWCQKQGKPLTPPQDYPDPDSFCWEK 450 460 470 480 490 500 340 350 360 370 380 390 mKIAA1 YLEETNSLPAPARAFKVKPPHGFQKKMKLEAVDKRNPLFIRVATVADTDDHRIKVHFDGW :::::.. .: ::::.:::.: .:::::::.::: .::::.: :..:::::.::::: mKIAA0 YLEETGTSAVPNWAFKVRPPHSFLVNMKLEAVDRRNPALIRVASVEDVEDHRIKLHFDGW 510 520 530 540 550 560 400 410 420 430 440 450 mKIAA1 SSCYDYWIDADSPDIHPVGWCSKTGHPLQAPLSPAELMEPSETGGCPTLGCRGVGHFKKS : ::.::::: :::::.::::::::::. :: : : : :::: :. :. : : : mKIAA0 SHNYDFWIDADHPDIHPAGWCSKTGHPLEPPLRPRESSSVSP-GGCPPLSHRSPPHTKTS 570 580 590 600 610 460 470 480 490 500 510 mKIAA1 RYLGTQSGANCPYSEINLSKERIFPDRLSGDTSPPTTPSFPRSKRMDTRESSSSPETREK .: . .:: : . : : .: .: . . :. : mKIAA0 KY--NFHHRKCPT-----------P---GCDGSGHVTGKFTAHHCL-----SGCP----- 620 630 640 650 520 530 540 550 560 570 mKIAA1 HANNFKEDSEKKKENEVKTSAEAKVVREEPTPSVQQSQPPQQVQQVQHAQPPQQAQKAPQ . : .... . :.. : : :.: mKIAA0 ----LAEKNQSRLKAELSDSETA-------------------------------ARK--- 660 670 580 590 600 610 620 630 mKIAA1 AQQAQQAQQAQQAPQAPQTPQPQQAPQVQQAQQAPQAQQAQQPQQAQQPQQAPPVQQPQQ . :.. .:.. :. :.. .. :. . :.. . :. mKIAA0 --------------KNPSNLSPRKKPR-------HQGRIGRPPKYRKIPEEDLQALPPSV 680 690 700 710 640 650 660 670 680 mKIAA1 VQQAQPTQQQAQTQQQAQRRSAVFLSFKPPIPCLPLR--WEQQSKLLPTVAGIPASRVSK :.:. .:.: : :: :::. :::: :::: :: ::: mKIAA0 VHQS------------------LFMSTLPTHADRPLSVCWEQHCKLLPGVAGISASTVSK 720 730 740 750 690 700 710 720 730 740 mKIAA1 WSTDEVSEFIQSLPGCEEHGKVFKDEQIDGEAFLLMTQTDIVKIMSIKLGPALKIFNSIL :. .:: :.:.: : :.....::::.::::::::.::.:::::::.::::::::.:.:: mKIAA0 WTIEEVFGFVQTLTGSEDQARLFKDEMIDGEAFLLLTQADIVKIMSVKLGPALKIYNAIL 760 770 780 790 800 810 750 760 mKIAA1 MFKAAEKNSHNEL ::: .. mKIAA0 MFKNTDDVFK 820 >>mFLJ00162 ( 718 res) mej01253 (718 aa) initn: 602 init1: 300 opt: 653 Z-score: 316.3 bits: 69.2 E(): 1.8e-12 Smith-Waterman score: 653; 34.465% identity (36.872% ungapped) in 383 aa overlap (102-468:296-669) 80 90 100 110 120 mKIAA1 MENKQDGRILRGSQRARRKRRGDSAVLKQGLPPKG--KKTWCWASYLEEE--KAVAVPTK .::. : : ::: .. . ..:. mFLJ00 ENDASHDFWCNLGTVDVHPIGWCAINSKILVPPRTIHAKFTDWKSYLMKRLVGSRTLPAD 270 280 290 300 310 320 130 140 150 160 170 180 mKIAA1 L-FKEHQSFPYNKNGFKVGMKLEGVDPDHQAMYCVLTVAEVCGYRIKLHF-DGYSDCYDF . .: .:. : :. ::.:: :: . . . .: : : :..: . :: :: :: mFLJ00 FHIKMVESMKYP---FRQGMRLEVVDKTQVSRTRMAVVDTVIGGRLRLLYEDGDSD-DDF 330 340 350 360 370 380 190 200 210 220 230 240 mKIAA1 WVNADALDIHPVGWCEKTGHKLRPPKGYKEEEFNWQSYLKTCKAQAAPKSLFENQNITVI : . . :::::: ...:: .. .. ... . .. .:.: ::.. . mFLJ00 WCHMWSPLIHPVGWSRRVGHGIKMSD--RRCDMSHHPTFRKIYCDAVPY-LFKKVRAVYT 390 400 410 420 430 250 260 270 280 290 300 mKIAA1 PSG-FRVGMKLEAADKKSPSVICVATVTD-MVDNRFLVHFDNWD--ESYDYWCESNSPH- .: :. :::::: : . . :::::. ..:. ... :. .. :..: : : mFLJ00 EGGWFEEGMKLEAIDPLNLGSICVATICKVLLDGYLMICVDGGPSTDGSDWFCYHASSHA 440 450 460 470 480 490 310 320 330 340 350 mKIAA1 IHPVGWCKEHRRTLITPPGYSHVKHFSWDKYLEETNSLPAPARAFKVK-PPHGFQKKMKL : :. .:... : : :: ... :.:. :::.:.: :::: :.. : :::. ::: mFLJ00 IFPATFCQKNDIELTPPKGY-ETQPFAWETYLEKTKSKAAPARLFNMDCPNHGFKVGMKL 500 510 520 530 540 550 360 370 380 390 400 410 mKIAA1 EAVDKRNPLFIRVATVADTDDHRIKVHFDGWSSCYDYWIDADSPDIHPVGWCSKTGHPLQ :::: .: .: :::: . . ...:::::.. :: :.: .::::.::::: ::. :: mFLJ00 EAVDLMEPRLICVATVKRVVHRLLSIHFDGWDNEYDQWVDCESPDIYPVGWCELTGYQLQ 560 570 580 590 600 610 420 430 440 450 460 470 mKIAA1 APLSPAELMEPSETGGCPTLGCRGVGHFKK----SRYLGTQSGANCPYSEINLSKERIFP :.: :: :.. . :. .: .. ..:.. : : :: mFLJ00 PPVS-AEPNTPQKGKDTTKKKKKQFGKKRKRIPSAKTRPLRQGSKKPLLEDNLEALGVSE 620 630 640 650 660 670 480 490 500 510 520 530 mKIAA1 DRLSGDTSPPTTPSFPRSKRMDTRESSSSPETREKHANNFKEDSEKKKENEVKTSAEAKV mFLJ00 PVPDDIIAVCVKEEHQDISSLDRSPSPQLPLPIESIKQERNN 680 690 700 710 >>mKIAA1617 ( 948 res) mbp18039 (948 aa) initn: 349 init1: 171 opt: 376 Z-score: 190.2 bits: 46.2 E(): 1.9e-05 Smith-Waterman score: 515; 23.434% identity (29.082% ungapped) in 798 aa overlap (103-753:152-941) 80 90 100 110 120 mKIAA1 ENKQDGRILRGSQRARRKRRGDSAVLKQGLPPKGKKTWC--WASYL--EEEKAVAVPTKL :: . : :...: : . ..:..: mKIAA1 EDRRADFWCDVIIADLHPVGWCTQNNKVLRPPDAIKDKYSDWTDFLIRELTGSRTAPANL 130 140 150 160 170 180 130 140 150 160 170 180 mKIAA1 FKEHQSFPYNKNGFKVGMKLEGVDPDHQAMYCVLTVAEVCGYRIKLHFDG--YSDCYDFW .. . . : .: : .. .: ...:.: : :..:.. : ... :: : mKIAA1 LEGPLRGKGPIDLITVDSLIELQDSQNPFQYWIVSVTENVGGRLRLRYVGLEHTESYDRW 190 200 210 220 230 240 190 200 210 220 230 240 mKIAA1 VNADALDIHPVGWCEKTGHKLRPPKG--YKEEEFNWQSYLKTCKAQAA----PKSLFENQ . ..:.:::... ... ::. : . :.:. :. . :: : .:... mKIAA1 LFYLDYRLRPIGWCQENKYRMDPPSDLYYLKLPFEWKCALEKALVLAAESPLPMEVFKDH 250 260 270 280 290 300 250 260 270 280 290 mKIAA1 NITVIPSGFRVGMKLEAADKKSPSVICVATVTDMVDNRFL-VHFDNWDESYD---YWCES . : :::.::. ..: : :.:: . ...:. : .:. : . :.. mKIAA1 A-DLQSHFFTVGMRLETLHISDPFHIYPASVTKVFNSKFFQVAIDDLRPEADKPTMLCHA 310 320 330 340 350 360 300 310 320 330 340 350 mKIAA1 NSPHIHPVGWCKEHRRTLITPPGYSHVKHFSWDKYLEETNSLPAPARAFKVKPPHGFQKK .: : :: :: .. .: : ::: . :.: : .. .. :: :: .::.:. mKIAA1 DSLGILPVQWCLKNGVNLAPPKGYSG-QDFNWVDYHKQRQAEEAPHFCFKNAFSRGFSKN 370 380 390 400 410 360 370 380 390 400 410 mKIAA1 MKLEAVDKRNPLFIRVATVADTDDHRIKVHFDGWSSCY-DYWIDADSPDIHPVGWCSKTG ::::::. :: . ::::... . . .:..: . . : .: :: :: ::::: .. mKIAA1 MKLEAVNPVNPGEVCVATVVSVKGRLLWLHLEGLETPMPDIIVDMDSMDIFPVGWCEANS 420 430 440 450 460 470 420 430 440 450 mKIAA1 HPLQAP--------------------LSPAELME-PSETGGCPTLGCRGVGHFKKSRYLG .:: .: :::. . . : : : :: .. ..: mKIAA1 YPLTTPYKASSKSKRKTVHFKMEKQLLSPVPIEKIPHELCLLPPQMDSPVGAIN-AKYCC 480 490 500 510 520 530 460 470 480 490 500 510 mKIAA1 TQSGAN--CPYSEINLSKERIFPDRLSGDTSPPTTPSFPRSKRMDTRESSSSPETREKHA : .: : .: :.: :: ..: ...: . ... .: : . mKIAA1 PQLFVNHRC-FSGPFLNKGRI--SELPQSVGPGMCVLVLKEILTLITNAAYKP-GRVLRE 540 550 560 570 580 590 520 530 540 mKIAA1 NNFKEDSEKKKENEV-------KT-SAEAKVVRE---------------EPTPS------ .. :: : ....:. :: : .:.:: : :. mKIAA1 LQLVEDPEWNSQEEILKAKYGGKTYRAVVKIVRTADQVMNFCRQVCAKLECCPNLLSPVL 600 610 620 630 640 650 550 560 570 580 590 600 mKIAA1 VQQSQPPQQVQQVQHAQPPQQAQKAPQAQQAQQAQQAQQAPQAPQTPQPQQAPQVQQAQQ .... : . ... ... :.. .... . :.. . . ... ::. .. mKIAA1 ISETCPENCSVHTKTRYTYYYGKRRRVIQSSLRVSNIETPPKSTRRRKRRKSVYVQKRRK 660 670 680 690 700 710 610 620 630 640 mKIAA1 A----------------PQAQQAQQPQ--QAQQPQQAP---PVQQPQQVQQAQPTQQQAQ . :. : :. :. :.. : : . :. . .. : . . mKIAA1 SAIVVPAGVPAGVPAGVPEDIPAGIPEGIPASIPESIPEGIPESLPEAIPESIPKGSAQK 720 730 740 750 760 770 650 660 670 mKIAA1 TQQQ-------AQRR------------SAVFLSFKPPIPCLPLRWEQQS----------- :.:. :... ::. . : : . :: .... mKIAA1 TEQEKRETLDTARKKTGYHGPAYQTDTSAAQVPFARPRRAVTLRRNSEALKRPPVERARR 780 790 800 810 820 830 680 690 700 mKIAA1 -KLLPTVAGI------PASRVSK--------------------WSTDEVSEFIQSLPGCE . .::.:. : :. : ::. .: .::. : : mKIAA1 VRTVPTTASSNNRVKGPLVRIVKPEDSSQSDEEKLILESNPLEWSVTDVVRFIK-LTDCA 840 850 860 870 880 890 710 720 730 740 750 760 mKIAA1 EHGKVFKDEQIDGEAFLLMTQTDIVKIMSIKLGPALKIFNSILMFKAAEKNSHNEL ...:....:::.:.::.: . . : .:::::.:. ..: :.: mKIAA1 PLARIFQEQDIDGQALLLLTLPTVQECMELKLGPAIKLCHQIERVKVAFYAQYAS 900 910 920 930 940 >>mKIAA0192 ( 1146 res) msp04171 (1146 aa) initn: 1466 init1: 290 opt: 309 Z-score: 159.1 bits: 40.7 E(): 0.001 Smith-Waterman score: 310; 31.897% identity (35.749% ungapped) in 232 aa overlap (439-650:883-1109) 410 420 430 440 450 460 mKIAA1 GWCSKTGHPLQAPLSPAELMEPSETGGCPTLGCRGVGHFKKSRYLGTQS--GANCPYSEI :: .: .. : : :. : . :.. mKIAA0 TSVYRQQQPTVPQGQRLRQQLQAKIQSQGMLGQSSVHQMTPSSSYGLQTSQGYTSYVSHV 860 870 880 890 900 910 470 480 490 500 510 mKIAA1 NLSKER-----IFPDRLSGD----TSPPTTPSF--PRSKRMDTRESSSSPETREKHANNF .:... . : :.. : : :.:.. : ..... : :. . ..... mKIAA0 GLQQHTGPAGTMVPPSYSSQPYQSTHPSTNPTLVDP-TRHLQQRPSGYVHQQAPTYGHGL 920 930 940 950 960 970 520 530 540 550 560 mKIAA1 KEDSEKKKENEVKTSAEAKVVREEPTPSVQQS------QPPQQVQQVQHAQPPQQAQKAP .... ... .. . .. . .:: . : :: :: :. : :: :. mKIAA0 T-STQRFSHQTLQQTPMMGTMTPLSAQGVQAGVRSTSILPEQQQQQQQQQQQQQQQQQQQ 980 990 1000 1010 1020 1030 570 580 590 600 610 620 mKIAA1 QAQQAQQAQQAQQAPQAPQTPQPQQAPQVQQAQQAPQAQQAQQPQQAQQPQQAPPVQQP- : :: :: :: :: . : : :: . :: :: : :: :: :: :: :: ::: mKIAA0 QQQQQQQQQQQQQQYHIRQQQQQQQMLRQQQQQQQQQQQQQQQQQQQQQQQQQ---QQPH 1040 1050 1060 1070 1080 630 640 650 660 670 680 mKIAA1 QQVQQAQPTQQQAQTQQQAQRRSAVFLSFKPPIPCLPLRWEQQSKLLPTVAGIPASRVSK :: ::: : : : :.: : ::.. mKIAA0 QQQQQAAPPQPQPQSQPQFQRQGLQQTQQQQQTAALVRQLQQQLSNTQPQPSTNIFGRY 1090 1100 1110 1120 1130 1140 >>mFLJ00386 ( 769 res) mbe05021 (769 aa) initn: 1018 init1: 243 opt: 295 Z-score: 154.9 bits: 39.4 E(): 0.0017 Smith-Waterman score: 311; 30.597% identity (33.469% ungapped) in 268 aa overlap (419-682:95-343) 390 400 410 420 430 440 mKIAA1 GWSSCYDYWIDADSPDIHPVGWCSKTGHPLQAPLS-PAELMEPSETGGCPTLGCRGVGHF :: .: : . .. : ::: :: : :.: mFLJ00 VFLKAKTRDEYLSLVARLIIHFRDIHNKKSQASVSDPMNALQ-SLTGG-PTPGAAGIGM- 70 80 90 100 110 120 450 460 470 480 490 500 mKIAA1 KKSRYLGTQSGANCPYSEINLSKERIFPDRLSGDTSPPTTPSFPRSKRMDTRESSSSPET : : . :. . .. : :::. : :. :.. . :...:.: mFLJ00 -PPRGPGQSLGGMGGLGAMGQ------PLPLSGQPPPGTSGMAPHGMAV---VSTATPQT 130 140 150 160 170 510 520 530 540 550 560 mKIAA1 R-EKHANNFKEDSEKKKENEVKTSAEAKVVREEPTPSVQQSQPPQQVQQVQHAQPPQQAQ . . . ............ . . ... .. . ::.: :: : :.:. :: : mFLJ00 QLQLQQVALQQQQQQQQQQQFQ---QQQAALQQQQQQQQQQQQQQQFQAQQNAMQ-QQFQ 180 190 200 210 220 570 580 590 600 610 620 mKIAA1 KAPQAQQAQQAQQAQQAPQAPQTPQPQQAPQVQQAQQAPQAQ-QAQQPQQAQQPQQA-PP . : :: :: :: :. . . : :: : :: :. : : : :: :: :: :: :: mFLJ00 AVVQQQQLQQQQQQQHLIKLHHQSQQQQIQQ-QQLQRMAQLQLQQQQQQQQQQALQAQPP 230 240 250 260 270 280 630 640 650 660 670 680 mKIAA1 VQQPQQVQQAQPTQQQAQTQQQAQRRSAVFLSFKPPIPCLPLRWEQQSKLLPTVAGIPAS .:::. .:: :: .:: :: .: . . : :. .: .. : . : mFLJ00 MQQPS-MQQPQPPPSQALPQQLSQLHHPQHHQPPPQAQQSPIAQNQPPQIPPQSQSQPLV 290 300 310 320 330 340 690 700 710 720 730 740 mKIAA1 RVSKWSTDEVSEFIQSLPGCEEHGKVFKDEQIDGEAFLLMTQTDIVKIMSIKLGPALKIF mFLJ00 SQAQALPGPMLYAAQQQLKFVRAPMVVQQPQVQPQVQQVQPQVQPQAAVQAAQSAQMVAP 350 360 370 380 390 400 761 residues in 1 query sequences 1768256 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:53:25 2006 done: Mon Mar 27 10:53:26 2006 Scan time: 0.860 Display time: 0.180 Function used was FASTA [version 3.4t11 Apr 17, 2002]