Comparison of KIAA cDNA sequences between mouse and human (KIAA1340)
<<Original sequence data>>
mouse mKIAA1340 (mpm09346) length: 5481 bp, CDS: 1 - 849
human KIAA1340 (fj00164) length: 3876 bp, CDS: 1 - 1326
In this page, the longest coding region predicted by GeneMark
was assigned as CDS for each of mouse and human KIAA cDNAs.
They were colored in green. When the CDS positions were not identical
on the aligned sequences between mouse and human cDNAs, mouse cDNA
sequence was translated based on the human CDS information.
The amino acid sequence produced here may not be identical to the
protein sequence deduced (see Description).
<<Aligned sequence information>>
----------------------------------------------------------
region #match #mismatch %diff
----------------------------------------------------------
DNA
5'UTR: - - - -
CDS: 478 - 1326 746 103 12.1
3'UTR: 1327 - 6094 1513 950 38.6
amino acid
CDS: 478 - 1326 277 6 2.1
----------------------------------------------------------
<<Alignment>>
1 ----+----*----+----*----+----*----+----*----+----* 50
mpm09346 1 .................................................. 1
fj00164 1 GTGCTGGACTTCATCAACGCCGGCGGGGCCCGCGAAGGCTGGCTCCTGGG 50
V L D F I N A G G A R E G W L L G
51 ----+----*----+----*----+----*----+----*----+----* 100
mpm09346 1 .................................................. 1
fj00164 51 CCCGCGCGGGGAAAAGGGCGGCGGGGTGGACGAGGACGAGGAGATGGATG 100
P R G E K G G G V D E D E E M D E
101 ----+----*----+----*----+----*----+----*----+----* 150
mpm09346 1 .................................................. 1
fj00164 101 AGGTGAGCCTGCTGTCCGAGCTGGTGGAGGCGGCCTCCTTCCTGCAGGTC 150
V S L L S E L V E A A S F L Q V
151 ----+----*----+----*----+----*----+----*----+----* 200
mpm09346 1 .................................................. 1
fj00164 151 ACGTCCCTGCTGCAGCTGCTGCTGTCCCAGGTGCGGCTCAATAACTGCCT 200
T S L L Q L L L S Q V R L N N C L
201 ----+----*----+----*----+----*----+----*----+----* 250
mpm09346 1 .................................................. 1
fj00164 201 GGAGATGTACCGCCTGGCGCAGGTGTACGGGCTGCCCGACCTGCAGGAGG 250
E M Y R L A Q V Y G L P D L Q E A
251 ----+----*----+----*----+----*----+----*----+----* 300
mpm09346 1 .................................................. 1
fj00164 251 CCTGCCTGCGCTTCATGGTCGTCCACTTCCACGAGGTGCTGTGCAAGCCC 300
C L R F M V V H F H E V L C K P
301 ----+----*----+----*----+----*----+----*----+----* 350
mpm09346 1 .................................................. 1
fj00164 301 CAGTTCCACCTCCTGGGGTCTCCTCCCCAAGCTCCAGGGGATGTCAGCCT 350
Q F H L L G S P P Q A P G D V S L
351 ----+----*----+----*----+----*----+----*----+----* 400
mpm09346 1 .................................................. 1
fj00164 351 GAAGCAGAGGCTGAGGGAGGCCCGGATGACTGGGACTCCTGTCCTCGTGG 400
K Q R L R E A R M T G T P V L V A
401 ----+----*----+----*----+----*----+----*----+----* 450
mpm09346 1 .................................................. 1
fj00164 401 CCCTCGGGGACTTCCTGGGGGGACCCCTGGCCCCTCACCCCTACCAGGGG 450
L G D F L G G P L A P H P Y Q G
451 ----+----*----+----*----+----*----+----*----+----* 500
E T T E R W F P
mpm09346 1 ...........................GAGACCACGGAGCGCTGGTTCCC 23
|||| || ||||| ||||||||
fj00164 451 GAGCCCCCGTCCATGCTCAGGTACGAGGAGATGACTGAGCGTTGGTTCCC 500
E P P S M L R Y E E M T E R W F P
501 ----+----*----+----*----+----*----+----*----+----* 550
L A N N L P P D L V N V R G Y G S
mpm09346 24 CCTGGCCAACAACCTGCCCCCCGACCTGGTGAACGTCAGGGGCTACGGCT 73
|||||||||||||| || ||||||||||| || ||||||||||| || |
fj00164 501 GCTGGCCAACAACCTTCCTCCCGACCTGGTCAATGTCAGGGGCTATGGGT 550
L A N N L P P D L V N V R G Y G S
551 ----+----*----+----*----+----*----+----*----+----* 600
A I L D N Y L F I V G G Y R I T
mpm09346 74 CAGCCATTTTGGACAACTACCTCTTCATCGTGGGTGGTTACAGGATCACC 123
| ||||| ||||||||||||||||||| ||||| || |||||||||||
fj00164 551 CTGCCATCCTGGACAACTACCTCTTCATAGTGGGCGGGTACAGGATCACT 600
A I L D N Y L F I V G G Y R I T
601 ----+----*----+----*----+----*----+----*----+----* 650
S Q E I S A A H S Y N P I T N E W
mpm09346 124 AGCCAGGAGATCTCTGCCGCACACTCCTACAATCCCATCACCAACGAGTG 173
|||||||||||||| || || || |||||||| |||| ||||||||||||
fj00164 601 AGCCAGGAGATCTCCGCTGCGCATTCCTACAACCCCAGCACCAACGAGTG 650
S Q E I S A A H S Y N P S T N E W
651 ----+----*----+----*----+----*----+----*----+----* 700
L Q V A S M N Q K R S N F K L V A
mpm09346 174 GCTGCAGGTGGCCTCCATGAACCAGAAGCGATCTAACTTCAAACTTGTGG 223
||| |||||||||||||||||||||||| | |||||||||||||||||||
fj00164 651 GCTCCAGGTGGCCTCCATGAACCAGAAGAGGTCTAACTTCAAACTTGTGG 700
L Q V A S M N Q K R S N F K L V A
701 ----+----*----+----*----+----*----+----*----+----* 750
V N S K L Y A I G G Q A V S N V
mpm09346 224 CTGTCAATTCGAAGCTTTACGCCATCGGTGGGCAGGCCGTTTCTAACGTG 273
|||| ||||| || || || |||||||| ||||||||||||||||||||
fj00164 701 CTGTTAATTCAAAACTCTATGCCATCGGAGGGCAGGCCGTTTCTAACGTT 750
V N S K L Y A I G G Q A V S N V
751 ----+----*----+----*----+----*----+----*----+----* 800
E C Y N P E Q D A W N F V A P L P
mpm09346 274 GAGTGCTACAATCCCGAGCAAGATGCGTGGAATTTTGTGGCTCCCCTGCC 323
||||| ||||| |||||||| |||||||||||||||||||| ||| | ||
fj00164 751 GAGTGTTACAACCCCGAGCAGGATGCGTGGAATTTTGTGGCGCCCTTACC 800
E C Y N P E Q D A W N F V A P L P
801 ----+----*----+----*----+----*----+----*----+----* 850
N P L A E F S A C E C K G K I Y V
mpm09346 324 AAACCCTCTGGCTGAGTTCTCTGCCTGCGAGTGCAAGGGGAAGATTTACG 373
|| ||||||||||||||||||||||| ||||| ||||| || ||||| |
fj00164 801 CAATCCTCTGGCTGAGTTCTCTGCCTGTGAGTGTAAGGGAAAAATTTATG 850
N P L A E F S A C E C K G K I Y V
851 ----+----*----+----*----+----*----+----*----+----* 900
I G G Y T T R D R N M N I L Q Y
mpm09346 374 TCATTGGCGGATATACCACCCGAGATCGCAACATGAACATCCTGCAGTAC 423
||||||| ||||| || ||| |||| || ||||||||||| ||||||||
fj00164 851 TCATTGGAGGATACACTACCAGAGACCGGAACATGAACATTTTGCAGTAC 900
I G G Y T T R D R N M N I L Q Y
901 ----+----*----+----*----+----*----+----*----+----* 950
C P S A D L W T L F E T C D V H I
mpm09346 424 TGCCCCTCCGCCGACCTCTGGACGCTGTTTGAGACCTGTGACGTCCATAT 473
|||||||| ||||| | |||||||| ||||| || ||||||||||| ||
fj00164 901 TGCCCCTCTTCCGACATGTGGACGCTCTTTGAAACATGTGACGTCCACAT 950
C P S S D M W T L F E T C D V H I
951 ----+----*----+----*----+----*----+----*----+----* 1000
R K Q Q M V S V E E T I Y I V G G
mpm09346 474 CCGCAAGCAGCAGATGGTGTCCGTGGAGGAGACCATCTACATCGTGGGTG 523
|||||||||||||||||||| ||||| |||||||||||||||||||| |
fj00164 951 TCGCAAGCAGCAGATGGTGTCTGTGGAAGAGACCATCTACATCGTGGGGG 1000
R K Q Q M V S V E E T I Y I V G G
1001 ----+----*----+----*----+----*----+----*----+----* 1050
C L H E L G P N R R S S Q S E D
mpm09346 524 GGTGTCTCCATGAACTGGGGCCCAACCGCAGGAGCAGCCAGAGTGAGGAC 573
|||||||||| || ||||||||||||||||||||||||||||| ||||||
fj00164 1001 GGTGTCTCCACGAGCTGGGGCCCAACCGCAGGAGCAGCCAGAGCGAGGAC 1050
C L H E L G P N R R S S Q S E D
1051 ----+----*----+----*----+----*----+----*----+----* 1100
M L T V Q S Y N T V T R Q W L Y L
mpm09346 574 ATGCTCACCGTGCAGTCCTACAACACAGTCACGCGTCAGTGGCTCTACCT 623
|||||||||||||||||||||||||| ||||| || ||||||||||||||
fj00164 1051 ATGCTCACCGTGCAGTCCTACAACACCGTCACCCGCCAGTGGCTCTACCT 1100
M L T V Q S Y N T V T R Q W L Y L
1101 ----+----*----+----*----+----*----+----*----+----* 1150
K E N T S K S G L N L T C A L H N
mpm09346 624 GAAGGAGAACACGTCCAAATCGGGCCTGAACTTGACATGCGCACTGCACA 673
||||||||||||||||||||||| || |||||||| || || || || |
fj00164 1101 CAAGGAGAACACGTCCAAATCGGGTCTTAACTTGACTTGTGCGCTCCATA 1150
K E N T S K S G L N L T C A L H N
1151 ----+----*----+----*----+----*----+----*----+----* 1200
D G I Y I M S R D V T L S T S L
mpm09346 674 ATGACGGCATCTACATTATGAGCAGGGACGTCACCCTGTCCACAAGCTTG 723
| |||||||||||||| |||||||| |||||||||||||| || ||||||
fj00164 1151 ACGACGGCATCTACATCATGAGCAGAGACGTCACCCTGTCGACCAGCTTG 1200
D G I Y I M S R D V T L S T S L
1201 ----+----*----+----*----+----*----+----*----+----* 1250
E H R V F L K Y N I F A D S W E A
mpm09346 724 GAGCACCGAGTGTTTCTCAAGTACAACATCTTTGCTGACAGCTGGGAAGC 773
|| ||||||||||| |||||||||||||||||| | || || ||||||||
fj00164 1201 GAACACCGAGTGTTCCTCAAGTACAACATCTTTTCAGATAGTTGGGAAGC 1250
E H R V F L K Y N I F S D S W E A
1251 ----+----*----+----*----+----*----+----*----+----* 1300
F R R F P A F G H N L L I S S L Y
mpm09346 774 CTTCCGGCGGTTCCCAGCTTTCGGACATAACTTGTTGATTTCCTCTCTCT 823
|| ||||| || |||||||| |||||||||||| || |||| ||||| |
fj00164 1251 ATTTCGGCGTTTTCCAGCTTTTGGACATAACTTGCTGGTTTCTTCTCTTT 1300
F R R F P A F G H N L L V S S L Y
1301 ----+----*----+----*----+----*----+----*----+----* 1350
L P N K A E T *
mpm09346 824 ATCTGCCCAATAAAGCAGAGACCTGACTGATTCAACGGTATTTAAAAGAA 873
||||||||||||||||||| || ||||||| | | | | | ||
fj00164 1301 ATCTGCCCAATAAAGCAGAAACATGACTGAATTGAATTGGTAGATGAAAA 1350
L P N K A E T *
1351 ----+----*----+----*----+----*----+----*----+----* 1400
mpm09346 874 AAGTCTGGTTCAAG............GGGGAAAAAGCAAGCCTTTGAAGT 911
|| |||||||||| | | || || | ||
fj00164 1351 AAACCTGGTTCAAGTTTTTTTTAAAATGTGGTGTCCCATTCCAAGGGAGA 1400
1401 ----+----*----+----*----+----*----+----*----+----* 1450
mpm09346 912 CCTGACTCCTGAAGGGACAGAGCGGGCTAACGTAGGTCACGTATGTAGGC 961
|| | |||| ||||| | ||| ||| ||||||||| ||| ||
fj00164 1401 CC.AATTCCTAAAGGGTAAAGAAGGGTTAAAGTAGGTCACATATATA.CA 1448
1451 ----+----*----+----*----+----*----+----*----+----* 1500
mpm09346 962 GGCTCAGCTGTAAATAAGCTTTCTTGAACTAATTACTTGAAAACT..TGG 1009
| ||||||||||||||||| ||||||||||||||||||||||| |||
fj00164 1449 GTAGCAGCTGTAAATAAGCTTACTTGAACTAATTACTTGAAAACTGGTGG 1498
1501 ----+----*----+----*----+----*----+----*----+----* 1550
mpm09346 1010 GGTGAAGAGACCAACCCTATTTTTTCCAGATTATTATTATTATTATTATT 1059
||||||||||| | || | || ||| |
fj00164 1499 AAAAAAGAGACCAACTTTGTTAT................TTTTTAAATTA 1532
1551 ----+----*----+----*----+----*----+----*----+----* 1600
mpm09346 1060 TTTTTTTTTGTATCATGGGAACAAATATCATGATATTCATCCAAACCTAA 1109
|| ||||| || |||||| ||| || ||||||| | |
fj00164 1533 TTGATTTTTAAATTATGGGAGCAA........ATCCATCTCCAAACATGA 1574
1601 ----+----*----+----*----+----*----+----*----+----* 1650
mpm09346 1110 CAGTCTTGGACCAACAGCTAAAACCCACCATTAAAAAGTAGACTGCTAGG 1159
| |||||| ||| | || | ||| |||| ||||| | | |
fj00164 1575 TACTCTTGGGCCA......ATGACGGATCATCAAAATGTAGATTCATTGT 1618
1651 ----+----*----+----*----+----*----+----*----+----* 1700
mpm09346 1160 GTCTGCTTTGT.ACGGGCCAAGGTCAGTAGCTAACCTGTTAGTAATGGTT 1208
||||| | || | ||||||| |||| ||
fj00164 1619 GTCTGTGTGGTAAAGGGCCAAAGTCAATA..................... 1647
1701 ----+----*----+----*----+----*----+----*----+----* 1750
mpm09346 1209 TTGTTTTGTGTTTTTTTCCTGCTGGGAATGGAATCCAGGGCCTCATGGTA 1258
||| |
fj00164 1648 ...........................................ATTGGGA 1654
1751 ----+----*----+----*----+----*----+----*----+----* 1800
mpm09346 1259 GTCCTGGAAAAGATGACATTAAAAATGCCCTTTCTTCAGGTCACCTGAGA 1308
||| |||||||| || ||||| | | || ||||| | ||| |
fj00164 1655 CAAATGGTAAAGATGA.TTTTAAAATCTGTTGTATTTAGGTCCCTTGACA 1703
1801 ----+----*----+----*----+----*----+----*----+----* 1850
mpm09346 1309 TCTCCTCAG......AAGGGACA...TTCCTTTTGGCGATCAGTTTATTT 1349
| || | || ||| || | || ||||| |||||| | ||
fj00164 1704 TATCATTAGCACCTTAAGTGAGAGGTTTTCTTTTTCTTATCAGTGTCCTT 1753
1851 ----+----*----+----*----+----*----+----*----+----* 1900
mpm09346 1350 GACAAGCATTAGGATCCGTCACCTCCTTAGCTTCCGACTCCCTTGTCACC 1399
|||||||||| || || || || || | |||||
fj00164 1754 GACAAGCATTCATATTAACATATTCATTCTCT.....CTTCTCCATCACC 1798
1901 ----+----*----+----*----+----*----+----*----+----* 1950
mpm09346 1400 CTGTCTCTCTGGGCAGGCATTTTATCTTATATTTGTTTTCAGAAACGCTA 1449
| | | | || ||| | | | | |||
fj00164 1799 CATACCCAC...ACATACATCTAGTATGTTTAGGGTTC............ 1833
1951 ----+----*----+----*----+----*----+----*----+----* 2000
mpm09346 1450 ACAGGTGTGTCCAACCTTTTGATATTTAGAAATCATATTATCATTTATAA 1499
||||| || ||||||| | || | || |||| |
fj00164 1834 .....TGTGTTCA.......GATATTTTGTTTGCACACTACTTTTTAGGA 1871
2001 ----+----*----+----*----+----*----+----*----+----* 2050
mpm09346 1500 ACCTTTAAAGAAGTCTCTTCATGTTCTAAGTAAGTACCTGATGTTGTGTT 1549
| ||
fj00164 1872 AACT.............................................. 1875
2051 ----+----*----+----*----+----*----+----*----+----* 2100
mpm09346 1550 GGCTGCTTCGTAGCTGTCCTTGGGGCCCACAAGCTATGGCTGCCTTGCCT 1599
fj00164 1876 .................................................. 1876
2101 ----+----*----+----*----+----*----+----*----+----* 2150
mpm09346 1600 GCTACAAGGATAGAGGCAGCCAGAGCATCCACATAAGCAGCCAGAGCATC 1649
|| || ||| ||| | ||| | |||| | || ||| | |
fj00164 1876 ..TATAATGATGGAGCCCTACAGTGAATCCTTACCAGTGTTCAGTCCTCC 1923
2151 ----+----*----+----*----+----*----+----*----+----* 2200
mpm09346 1650 CACAAACGTGGATAAACACGTTCTCAGCCACTTTCCCAGTC.TTTGTGCA 1698
| |||| || ||||| | |||| ||| | ||| |||| | ||| ||||
fj00164 1924 CCAAAACTTGCATAAAAATATTCTTAGCTATTTTTCCAGCCTTTTTTGCA 1973
2201 ----+----*----+----*----+----*----+----*----+----* 2250
mpm09346 1699 ATTGAGAATGCTGTCTAAAGTTGACTAGTGAACCTCTTATGTCA..TGTG 1746
|| ||||||| |||| | |||||||||| | | | ||
fj00164 1974 GTTACAAATGCTGGATAAATAGACTGATAAAACCTCTTATTTTATTTATG 2023
2251 ----+----*----+----*----+----*----+----*----+----* 2300
mpm09346 1747 TGGCAAATGAGGGTCTGTGTGGGTCACCACAGCTGCATTG.......... 1786
||||| | | || ||| | |||| ||
fj00164 2024 TGGCAGGTTGCATATTTATGTGGACACATAGGTTGCACTGCTAGGCATTC 2073
2301 ----+----*----+----*----+----*----+----*----+----* 2350
mpm09346 1787 .............TGAGGACTTTGTTTTTAGAAGATTG...CTATAAACA 1820
||||| | | ||||||| | || ||| || |
fj00164 2074 TGTATTGTTTTAAAGAGGATATATTATTTAGAAAAATGGACATATGAATA 2123
2351 ----+----*----+----*----+----*----+----*----+----* 2400
mpm09346 1821 CT.TTATAAATTGAGTCTTAGATGAGGAGG............AGGACCAC 1857
| ||| ||||||||||||| || | | | ||||
fj00164 2124 TTATTAAAAATTGAGTCTTAAATTTAAATGGGAAGGGAAGAAAACACCAA 2173
2401 ----+----*----+----*----+----*----+----*----+----* 2450
mpm09346 1858 ATGAGGAAAGA...TGCCTTTAGGAGTTATTTTAATTGAATGTATTTGAC 1904
|| || ||| | |||||||| |||||| ||| |||||||||||||||
fj00164 2174 ATAAGAAAAAAATTTGCCTTTAAGAGTTACTTTTGTTGAATGTATTTGAC 2223
2451 ----+----*----+----*----+----*----+----*----+----* 2500
mpm09346 1905 CTAGTTCTTGTTTTAAGGCAGAAATCAAAACCAAACCAAACCAACATTTG 1954
|||||||| |||||||| | ||| ||| ||
fj00164 2224 TTAGTTCTTATTTTAAGG.................CTAAAAAAACTTTGT 2256
2501 ----+----*----+----*----+----*----+----*----+----* 2550
mpm09346 1955 CACATTTACTTAGGTTTTCTCCTAGCTTGATCTTAGCCTTAGATGTTCAG 2004
|| ||||| | || | ||| || |||||||| || | | |
fj00164 2257 CATATTTAAGTCGGCAGCTTTCTAATTTAATCTTAGCTTTGTAATTCATG 2306
2551 ----+----*----+----*----+----*----+----*----+----* 2600
mpm09346 2005 CCGTGTTTTGCCTTTTTAAGGGAAGGATGGCTGTAGCTGATGTGTGCTAG 2054
|| ||| ||||| ||||| || | || |||||| |
fj00164 2307 TTTTGCTTTTGTGGACTAAGGTAAGGACAGCATTTAAATATTTGTGCTGG 2356
2601 ----+----*----+----*----+----*----+----*----+----* 2650
mpm09346 2055 AAAGCAGGGGAGATGTCCTTTACAGACATGGGAAGGCCTCTGCTGGCCTT 2104
| | ||| ||| | | ||||||| ||| | || |||| ||| ||
fj00164 2357 AGTGAGGGGAAGAAG.CTGTTACAGAAGTGGAATGGTTTCTGGTGGTATT 2405
2651 ----+----*----+----*----+----*----+----*----+----* 2700
mpm09346 2105 TCTGACTTGAGGTGAGGTGCTGGCTTCAGAGCTCTCATGCCAACAACGGT 2154
||||| | |||| | ||||| | | | |||
fj00164 2406 TCTGAAGTTAGGTAAAGTGCT...............TTACTTGCCTTGGT 2440
2701 ----+----*----+----*----+----*----+----*----+----* 2750
mpm09346 2155 GCATAACTTAAGGA.CCTACCAATCATGGGTCTGTGTTTCTTAAAAGACT 2203
||| | || | | | ||| | ||| || | | || |
fj00164 2441 TGTTAATTGAAATAGAATTCAGCTCAAGCAGTTGTTTTCAGTGAGTGAGT 2490
2751 ----+----*----+----*----+----*----+----*----+----* 2800
mpm09346 2204 CAAGGGCCTACTTAGCACGCATGAGAGGCCCCAGGTTTAATCTCCGGCAC 2253
| | | | | || | | ||| | |
fj00164 2491 ...........TAACAATAAAAGCTTCTGCCAATCATAGATCAACATTCC 2529
2801 ----+----*----+----*----+----*----+----*----+----* 2850
mpm09346 2254 TTACAGCAACAGCAACAAGGTCCTCACCTACAGGAATTTTGATTGAAGAG 2303
| | | ||| || | | | |||||||||||| |
fj00164 2530 TCAAAAATACATACACTCATACTTATGGAAATTTTATTTTGATTGAAAAC 2579
2851 ----+----*----+----*----+----*----+----*----+----* 2900
mpm09346 2304 AATTTGCTGCAACCAGCTGCTATCTTGTAATAGAGTTGGCTAAA...GGG 2350
| | ||| || | ||| ||| ||||||| | | | |||| |
fj00164 2580 ACT...CTGAAATTATCTGATATTTTGTAATGGCATCAGTTAAACTGTGA 2626
2901 ----+----*----+----*----+----*----+----*----+----* 2950
mpm09346 2351 ACCGGACTCCATC..TCTACACCAGCAGTGGGCTGCCGCCTTGCA..... 2393
| ||| |||||| ||| || | ||| |||| | | || ||
fj00164 2627 GCTGGATTCCATCTTTCTGCAGTAACAGCGGGCAGAACCATTTCAGTTAG 2676
2951 ----+----*----+----*----+----*----+----*----+----* 3000
mpm09346 2394 ..........CATTAAAGAAAGCTCCACAG....AGAACCAAGAGCTACA 2429
|| ||||||| | || | || || |
fj00164 2677 CATGTGCCTCACTTTAAGAAAGTCCTGTAGGGGAAAAAAAAAACTGTCAG 2726
3001 ----+----*----+----*----+----*----+----*----+----* 3050
mpm09346 2430 GGCAGATTCTTCCTGGTTCCTTGCACAGCTGCTTTCCTGGTAGCTGGC.. 2477
|| |||| | | | ||| || | ||||| || |
fj00164 2727 AGCGAATTCATGCATTCAACAAACACTTATGAGTGCCTGGAGTATGCCAT 2776
3051 ----+----*----+----*----+----*----+----*----+----* 3100
mpm09346 2478 ..........CATGGGAGAGGGAAGCTGACCCCTAGTAGGTCTTCAGTGT 2517
||| || | ||| | | || || |||||||| |
fj00164 2777 CCACTGTGCAGATGTAGGACAGGGGCTAATCACTTAGAGTTCTTCAGT.T 2825
3101 ----+----*----+----*----+----*----+----*----+----* 3150
mpm09346 2518 TAATGAGGGAGTCACTTCAGAGTTTCTTTGCAGCCAT.GCCTCTAATACA 2566
|| | ||||| ||| ||| ||||||| || |||| ||||||| || |
fj00164 2826 TATTAGAGGAGTGACTACAGGTTTTCTTTACAACCATGGCCTCTAGTATA 2875
3151 ----+----*----+----*----+----*----+----*----+----* 3200
mpm09346 2567 GCT....TTAGAGCCTCGTTATAAAACTCTTCTTTGCACAGTGGTTTAGA 2612
| | || | | ||||||||| | | |||||||| ||| |
fj00164 2876 CTTAAAATAAGCGTCCAGTTATAAAAAGCCTATTTGCACAACTTTTTGGG 2925
3201 ----+----*----+----*----+----*----+----*----+----* 3250
mpm09346 2613 ATCTCTGCT..................AGTCTTTATTTGGGACATGGTGA 2644
| || || || | |||||| |||||| | |
fj00164 2926 AATACTTCTATTAACTAAAATGAGGTAAGCCATTATTTTGGACATAGAAA 2975
3251 ----+----*----+----*----+----*----+----*----+----* 3300
mpm09346 2645 CAATTCTTAGTGTCTTGTCATGAAATCTACCAATATCCATTCAAC...CT 2691
|| |||| || |||||||| |||| | | || | || || |
fj00164 2976 CAGATCTTTGTATCTTGTCACCAAATAATCTTACCTCTAGTCTACTTACA 3025
3301 ----+----*----+----*----+----*----+----*----+----* 3350
mpm09346 2692 GCTTATAATGTCATTGGAAGCTTACAGGCCATTTCCAGCCACATCTGTTT 2741
||| | | || ||||| | | ||| | ||
fj00164 3026 ACTTTGTAAGGGTTTCTAAGCT..............ATGCCCATTTATTC 3061
3351 ----+----*----+----*----+----*----+----*----+----* 3400
mpm09346 2742 TCAAACACTAAGTCTGTTTTTCTTACTCCCACCCCCTTTTTTCCCTCTCT 2791
|||| | |||| |
fj00164 3062 CCAAATATTAAGCC.................................... 3075
3401 ----+----*----+----*----+----*----+----*----+----* 3450
mpm09346 2792 AAGACAGGGTATTGCCTTACAATCCAGGATAACTCCAAACTGGAGACTCT 2841
fj00164 3076 .................................................. 3076
3451 ----+----*----+----*----+----*----+----*----+----* 3500
mpm09346 2842 CACCTCAGCCTCTTGCTTCTGTGCCTGTCTTTATGTATTACTTTTAAAAT 2891
fj00164 3076 .................................................. 3076
3501 ----+----*----+----*----+----*----+----*----+----* 3550
mpm09346 2892 TGTTTTGCTGGGCTCTTTTCAAATAACAAAAAACTCTGAGCTAAAATCTT 2941
| ||| || |||| |||||| | ||||||||
fj00164 3076 .................CTTAAAAAAATAAAACCTCTGAACCAAAATCTT 3108
3551 ----+----*----+----*----+----*----+----*----+----* 3600
mpm09346 2942 CACCAAAATGGTACT...TATATAATAGATTTAATTTATATTCACTTTAG 2988
| | ||| ||||| || || || |||||||||||||| | |||
fj00164 3109 CCCAGGAATAGTACTTAATAGATTTTAATGTTAATTTATATTCATTGTAG 3158
3601 ----+----*----+----*----+----*----+----*----+----* 3650
mpm09346 2989 AATTGAATTTTGGAGGAGTCTATAATTTCATTAC.TGCACTTTAAAGTCT 3037
||||||| ||| || || |||||||||||| | | |||||| |||
fj00164 3159 AATTGAA.TTTCCAGTGACCTGTAATTTCATTACATATATTTTAAAATCT 3207
3651 ----+----*----+----*----+----*----+----*----+----* 3700
mpm09346 3038 AATT................TATGTTTGTTGTTATGGCTCTTCATTTTTA 3071
| || | || |||| | | ||| | ||||
fj00164 3208 ATTTATTTTAGATGGTGTTAACTTTTCGTTGCTGAAGAGCTTAACTTTTT 3257
3701 ----+----*----+----*----+----*----+----*----+----* 3750
mpm09346 3072 TGCAGCCTAGCCCTGAATATTCAGAGGAAACTGGCAGTTGAATTAGCAAT 3121
|| | | ||| | ||| ||| | | | |||||||||||| | |
fj00164 3258 AAAGGCTTTGTCCTATACATTTAGAAG.ATGAGTCAGTTGAATTAGTACT 3306
3751 ----+----*----+----*----+----*----+----*----+----* 3800
mpm09346 3122 GGACAAAGA.TGGGCAATTATCTTGTGAAAATACAGATCTTA..AAAGCC 3168
||||||| | | || |||| ||| || | || ||| || ||| |
fj00164 3307 GGACAAACAGTTGGAGATTAGTTTGCAAATAAGCATATCATATCAAATAC 3356
3801 ----+----*----+----*----+----*----+----*----+----* 3850
mpm09346 3169 CATCATGGCATCTACCTGTTGACTAGTTCTCTTCCTGATGGCCATCTCTG 3218
|| | | ||| || || ||||||||||| | | || ||
fj00164 3357 AATATTCCAGCCAACCAGT....TAATTCTCTTCCTGGTTACATTCATTG 3402
3851 ----+----*----+----*----+----*----+----*----+----* 3900
mpm09346 3219 GACATATTT.CCTAATGCCAGCAACTAGATTCTTGGACCAAATGAAGTTC 3267
| ||||| ||||||| ||| |||||||||||||||| ||| | |
fj00164 3403 GGTCTATTTGCCTAATGTTGACAATTAGATTCTTGGACCAAGTGAGGGTG 3452
3901 ----+----*----+----*----+----*----+----*----+----* 3950
mpm09346 3268 TAACACTGACATCCACAAAGCTCTCACCCCAGGCTTAACATGTAGCCTGT 3317
| ||| ||||||||||||||
fj00164 3453 T...ACTCTGATCCACAAAGCTCT.......................... 3473
3951 ----+----*----+----*----+----*----+----*----+----* 4000
mpm09346 3318 GTGCAGTATATGGCTCTGGGGTTTAGATGCACAGACTCCCAGCAGAAGTT 3367
fj00164 3474 .................................................. 3474
4001 ----+----*----+----*----+----*----+----*----+----* 4050
mpm09346 3368 TGTTGTTCTTGCTGCCATCTATGCTTGGAGAAGAGAGTCATGTCATAGAA 3417
fj00164 3474 .................................................. 3474
4051 ----+----*----+----*----+----*----+----*----+----* 4100
mpm09346 3418 CTGGGAGGGTTTTATGACATCTGTCTGCCTGTGCCCTTTCTGAGCATTCT 3467
fj00164 3474 .................................................. 3474
4101 ----+----*----+----*----+----*----+----*----+----* 4150
mpm09346 3468 GAGAGCACTTGGAGTTCAGCTGGTGCCGACTGCAGACTTCGCCAGGATGA 3517
fj00164 3474 .................................................. 3474
4151 ----+----*----+----*----+----*----+----*----+----* 4200
mpm09346 3518 TAGTGTTCCTTTGGAAACCTTCCCTTCCTCAGACAACTCCTTATGCGATA 3567
fj00164 3474 .................................................. 3474
4201 ----+----*----+----*----+----*----+----*----+----* 4250
mpm09346 3568 CTTCGTATTTCTTTCCATTCTCTGTTGCCTTACTCCCCCTACCCCCAGCT 3617
fj00164 3474 .................................................. 3474
4251 ----+----*----+----*----+----*----+----*----+----* 4300
mpm09346 3618 TCTGAGGGGTTCTAGCTCCCACTGTGTAGCAGGAAGTGTCTGGGAGTACC 3667
fj00164 3474 .................................................. 3474
4301 ----+----*----+----*----+----*----+----*----+----* 4350
mpm09346 3668 CCCAAGGGAGCTTCCTGTCAAGTGTGCACTCCTACTCCAGGAGGCTTCTC 3717
fj00164 3474 .................................................. 3474
4351 ----+----*----+----*----+----*----+----*----+----* 4400
mpm09346 3718 CCCTTGGCACCAGAAAGGTTCTGAGATGATTGTGTGAAAATCTCTAACTA 3767
fj00164 3474 .................................................. 3474
4401 ----+----*----+----*----+----*----+----*----+----* 4450
mpm09346 3768 CTGCGATCTGAGCTAGGACATATTGTCAAAGAACCTACAAGGTGGGGGAT 3817
fj00164 3474 .................................................. 3474
4451 ----+----*----+----*----+----*----+----*----+----* 4500
mpm09346 3818 GCTGGCAAGAAACGCATACGGCTTAGGATTAAGCATGAAACCAAAGAGAC 3867
fj00164 3474 .................................................. 3474
4501 ----+----*----+----*----+----*----+----*----+----* 4550
mpm09346 3868 CTTGACCCTGCTGTTTTCTGTTGTTTCTAAAGCCAAGAACCCAAGCAAAC 3917
fj00164 3474 .................................................. 3474
4551 ----+----*----+----*----+----*----+----*----+----* 4600
mpm09346 3918 TTAAATGAGTTTACGTTCAAGCAGAGGGAAGGAGAGTATACTGTAGCTCT 3967
fj00164 3474 .................................................. 3474
4601 ----+----*----+----*----+----*----+----*----+----* 4650
mpm09346 3968 ATACTGGGAGAACAGAGGAACATGTTTCTTTTTAATAAATAGTTGTTTAT 4017
fj00164 3474 .................................................. 3474
4651 ----+----*----+----*----+----*----+----*----+----* 4700
mpm09346 4018 AGACTATTAGAGGAGCAGTCCTCATAATTCCAGGGAAAGTTATAAGCCTG 4067
|||||| || |
fj00164 3474 ......................................TTTATAAACCAG 3485
4701 ----+----*----+----*----+----*----+----*----+----* 4750
mpm09346 4068 TTTGGCCAAAGAGGTAAATAGAAGGGGCCCTGATGTCTTTGTCAAGGTGT 4117
|| |
fj00164 3486 GTTTG............................................. 3490
4751 ----+----*----+----*----+----*----+----*----+----* 4800
mpm09346 4118 TTGGTGAGCTTAGCTTAGCACTGCTGACGTGAGGGGCTGCAGGGCAAAGG 4167
fj00164 3491 .................................................. 3491
4801 ----+----*----+----*----+----*----+----*----+----* 4850
mpm09346 4168 GATCATGCTGAAGGTTGTCTTGACCTTACCCAGGAGTACGGGGTCTGTGT 4217
||||||| || |||||
fj00164 3491 ...........AGGTTGT........................GTGTGTGT 3505
4851 ----+----*----+----*----+----*----+----*----+----* 4900
mpm09346 4218 GTACACTCGCTCTGTCAGGGTTTGCACTTAGGAGACCTGTCAATCAGTGC 4267
||
fj00164 3506 GT................................................ 3507
4901 ----+----*----+----*----+----*----+----*----+----* 4950
mpm09346 4268 TACCAGACATCCTGCCAGCCTACCAGAGTGAAGTTCCCGCCCCTGCCTCT 4317
fj00164 3508 .................................................. 3508
4951 ----+----*----+----*----+----*----+----*----+----* 5000
mpm09346 4318 GAGATAGTCAGTATGAAGGGAGCTGTGATCTCTAGAAGTAGTGAGCTACA 4367
fj00164 3508 .................................................. 3508
5001 ----+----*----+----*----+----*----+----*----+----* 5050
mpm09346 4368 TCAATTCCATTCCTTGGTGATCAGAAACATTGAGTGTTGGTGTGAGACAG 4417
| |||| |||||| |
fj00164 3508 ...............................GTGTGTGGGTGTGTG.... 3522
5051 ----+----*----+----*----+----*----+----*----+----* 5100
mpm09346 4418 AGCCTAGCCTGGGGACACTGACTGAGCCACTGTCCCTGGGACAATGTGCT 4467
fj00164 3523 .................................................. 3523
5101 ----+----*----+----*----+----*----+----*----+----* 5150
mpm09346 4468 CTCATTTCAGCCATGGTGTAGTCAGAGATGCCCACTTTAGTCAGGCACAC 4517
fj00164 3523 .................................................. 3523
5151 ----+----*----+----*----+----*----+----*----+----* 5200
mpm09346 4518 TGGGCCCACTGCCCACTGCCTTGTGATTCAGTAATAACCCTGGGAGCTTG 4567
|| | | ||
fj00164 3523 ........................................TGTGTGTGTG 3532
5201 ----+----*----+----*----+----*----+----*----+----* 5250
mpm09346 4568 TTTGCCCTTAAATCTGAACATCATATCCCATGTTTCAGGTTTTTTTTTTT 4617
| || || | || | || ||| |
fj00164 3533 TGTGTGTGTATGTTTGCATATTATAGC....................... 3559
5251 ----+----*----+----*----+----*----+----*----+----* 5300
mpm09346 4618 TTTTACTGTGTGTTTTTTCTTTTTTTTTCTTTTAAAGTTAACTACTTTTT 4667
||| ||| | | || | |||
fj00164 3560 .................TCTCTTTAAGACAGACATCTAAAAAGATTTTGG 3592
5301 ----+----*----+----*----+----*----+----*----+----* 5350
mpm09346 4668 ATAATCCTTGCACTTCGCAGTTTGTGAAAACACAGAAATGATGTGGAATG 4717
|| || || ||||| ||| || | ||||||||
fj00164 3593 TTATTCTGGGCTGCCAGCAGTACGTGGGAA..........AGGTGGAATG 3632
5351 ----+----*----+----*----+----*----+----*----+----* 5400
mpm09346 4718 TGTTTTACTTAGAACTCACTCAGCACTGTAGCCCCGCAGATGGTTCTAAT 4767
||
fj00164 3633 TG................................................ 3634
5401 ----+----*----+----*----+----*----+----*----+----* 5450
mpm09346 4768 GAAGGAGGAAGAAGAGAAGGTGAAGATTTGGCACGAGTAAGCTCAGCGCT 4817
| || | ||| ||
fj00164 3635 ..................................CAATAGGAACAGATCT 3650
5451 ----+----*----+----*----+----*----+----*----+----* 5500
mpm09346 4818 GGTACGTTTACGCCTTTGCCTTTAAAACATTCCCGTGGAAGAACTCAGCA 4867
| ||| | | | | | ||
fj00164 3651 GTGCATTTTGTGACATCGTCCTT........................... 3673
5501 ----+----*----+----*----+----*----+----*----+----* 5550
mpm09346 4868 ATGCTCCCTTGGATACTTTGTCACGGAGGTTGGTTGAGTTCGCCTTGCTG 4917
| |||||
fj00164 3674 ...........................................CCTGCTG 3680
5551 ----+----*----+----*----+----*----+----*----+----* 5600
mpm09346 4918 ATGACTGTCGAGTGGTTTCCACCTTAGGTTTAGTACACGTGTTTGCTTTT 4967
|| | | | || || | |||| ||
fj00164 3681 TGCACATCAGCTGTGATGACATTTTGAGGGTAGT..............TT 3716
5601 ----+----*----+----*----+----*----+----*----+----* 5650
mpm09346 4968 CACTTTCGTTAGTTTGGGAACACAACAGGAAATACATAGTGACTGCCAGC 5017
| ||| | | | ||
fj00164 3717 TAATTTAGCTCGGTT................................... 3731
5651 ----+----*----+----*----+----*----+----*----+----* 5700
mpm09346 5018 TGCCACTTGACATAGCCATATTCACCCATTCCTACAGGAAGCCCGTGAAA 5067
fj00164 3732 .................................................. 3732
5701 ----+----*----+----*----+----*----+----*----+----* 5750
mpm09346 5068 TGAAAAAGAGGGTCCATTCCGTAGAGCCCAGGGTGCTCAGCGTTTCCGTA 5117
fj00164 3732 .................................................. 3732
5751 ----+----*----+----*----+----*----+----*----+----* 5800
mpm09346 5118 GGGCTGGTTGGTGCTTTCCATAGCTTGTCACTGGCAAAGCAAAGGAAAAT 5167
|| ||||||||
fj00164 3732 .CTCTTGTTGGTGC.................................... 3744
5801 ----+----*----+----*----+----*----+----*----+----* 5850
mpm09346 5168 GTGATTTGTTGTATCACTTCAGGGTGCGACATTTCTCTGTCCCTCCAGTG 5217
fj00164 3745 .................................................. 3745
5851 ----+----*----+----*----+----*----+----*----+----* 5900
mpm09346 5218 TTTTCTTACCTAGTTATTTTTATGGAAAAGAATAACCCTCAAGTTACATT 5267
| | ||| |||| || |
fj00164 3745 ..............CAGTATTACATTGAAGACTACC.............. 3766
5901 ----+----*----+----*----+----*----+----*----+----* 5950
mpm09346 5268 CTGTTATGACTGACACTTTCTTTGTTTGAAATATTGTACTGAGTCTGTAG 5317
||||| || | | || ||||||| | | || | | ||
fj00164 3767 ....TATGATAGAGGCAATGTTGCTTTGAAAATCTCCCTTCAGGC.GGAG 3811
5951 ----+----*----+----*----+----*----+----*----+----* 6000
mpm09346 5318 TTTGGAGTGTGGCATAAACACACACATCAGCATTGTCGCATATCTATAGC 5367
||| |||| |||
fj00164 3812 GTTGCAGTG......................................AGC 3823
6001 ----+----*----+----*----+----*----+----*----+----* 6050
mpm09346 5368 CGTGTTTGTACATTTGACACCTGTGAACCACAGAGCTGTGTTCATTTTGT 5417
|| | |||| || || || ||| |
fj00164 3824 CGAGATTGT.........GCCATTGCACTCCAGCCTGG............ 3852
6051 ----+----*----+----*----+----*----+----*----+----* 6100
mpm09346 5418 TTTTTTTTTTTTTTTTTTTTTGGACTATGGAATGAAATGCCTTTAAATAA 5467
||| || || || |||
fj00164 3853 ....................GCGACAGTGCAAGACTCTGTCTTC...... 3876
6101 ----+----*---- 6114
mpm09346 5468 AAGAGTTCTCAATC 5481
fj00164 3877 .............. 3877