FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1333.ptfa, 731 aa vs ./tmplib.26680 library 1768286 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 4.7347+/-0.00428; mu= 16.1285+/- 0.287 mean_var=99.9106+/-23.724, 0's: 0 Z-trim: 13 B-trim: 3 in 1/35 Lambda= 0.1283 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA1823 ( 376 res) mbh00306 ( 376) 299 66 7.7e-12 mKIAA4050 ( 762 res) mbg07005 ( 762) 229 54 9.4e-08 mKIAA0304 ( 1744 res) mbg06324 (1744) 224 53 3e-07 mKIAA0292 ( 1725 res) mbg10230 (1725) 202 49 4.9e-06 mKIAA1506 ( 1520 res) mbg19167 (1520) 192 47 1.7e-05 mKIAA1820 ( 1518 res) mpm10033 (1518) 174 44 0.00017 mKIAA0317 ( 826 res) mbg01653 ( 826) 164 42 0.00041 mKIAA0010 ( 1086 res) mbg01752 (1086) 145 38 0.0056 >>mKIAA1823 ( 376 res) mbh00306 (376 aa) initn: 247 init1: 247 opt: 299 Z-score: 304.9 bits: 66.1 E(): 7.7e-12 Smith-Waterman score: 299; 33.333% identity (34.677% ungapped) in 129 aa overlap (18-143:18-144) 10 20 30 40 50 60 mKIAA1 RRARGQTEVSRAAGKMNENKPDNSQSLACVFCRKNDDCPNKYGEKKTYEKWNFSVHYYCL :.: .... : ::..: : .. :. :. . ..:. :. mKIAA1 GLKWQSLNTLKIMSSSIEQKKGSTRQRKCGFCKSNRD--KECGQLLISENQKVAAHHKCM 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 LMSSGIWQRGKEEEGVYGFLIEDIRKEVQRASKLKCTVCKKNGASIGCVVPTCKRSYHLP :.::.. . ...:.. :: :::..::..:..:: :..:. ::.::: : ::.:.:: mKIAA1 LFSSALVSSHSDNESLGGFSIEDVQKEIKRGTKLMCSLCHCPGATIGCDVKTCHRTYHYH 60 70 80 90 100 110 130 140 150 160 170 mKIAA1 CGLQKECIFQFTDN---FASFCWKHRPVQAITSNKYSSSLPCTICLEFVEPIPTYNILQS :.:. . .. . . .: ::. mKIAA1 CALHDKAQIREKPSQGIYMVYCRKHKKTAHNSEADLEESFNEHELEPSSPKTKKKSRKGR 120 130 140 150 160 170 >>mKIAA4050 ( 762 res) mbg07005 (762 aa) initn: 139 init1: 109 opt: 229 Z-score: 231.5 bits: 53.5 E(): 9.4e-08 Smith-Waterman score: 229; 27.536% identity (29.921% ungapped) in 138 aa overlap (7-143:447-574) 10 20 30 mKIAA1 RRARGQTEVSRAAGKMNENKPDNSQSLACVFC-RKN :. :: . . : ... :..: . mKIAA4 KKIIPAPKPKGPGEPDSPTPLHPPTPPILSTDRSREDSPELNPPPGIDDNRQCALCLMYG 420 430 440 450 460 470 40 50 60 70 80 90 mKIAA1 DDCPNKYGEKKTYEKWNFSVHYYCLLMSSGIWQRGKEEEGVYGFLIEDIRKEVQRASKLK :: : : . : : .: : : :. ... ...: ..... : :...:. mKIAA4 DDSANDAG-RLLYIGQNEWTHVNCALWSAEVFE---DDDGS----LKNVHMAVIRGKQLR 480 490 500 510 520 100 110 120 130 140 150 mKIAA1 CTVCKKNGASIGCVVPTCKRSYHLPCGLQKECIFQFTDNFASFCWKHRPVQAITSNKYSS : :.: ::..:: . .: .::. :. :.:.: :. .: .:: mKIAA4 CEFCQKPGATVGCCLTSCTSNYHFMCSRAKNCVF--LDDKKVYCQRHRDLIKGEVVPENG 530 540 550 560 570 580 160 170 180 190 200 210 mKIAA1 SLPCTICLEFVEPIPTYNILQSPCCKNAWFHRDCLQVQAINAGVFFFRCTLCNNTDIFQK mKIAA4 FEVFRRVFVDFEGISLRRKFLNGLEPENIHMMIGSMTIDCLGILNDLSDCEDKLFPIGYQ 590 600 610 620 630 640 >>mKIAA0304 ( 1744 res) mbg06324 (1744 aa) initn: 155 init1: 155 opt: 224 Z-score: 222.6 bits: 53.1 E(): 3e-07 Smith-Waterman score: 224; 28.947% identity (31.429% ungapped) in 114 aa overlap (29-142:636-740) 10 20 30 40 50 mKIAA1 RRARGQTEVSRAAGKMNENKPDNSQSLACVFCRKNDDCPNKYGEKKTYEKWNFSVHYY :..: : : .: . . : : .: mKIAA0 PESGQPPADPSAAFQSKDPAAFSHLDDPRQCALCLKYGDADSKEAGRLLYIGQNEWTHVN 610 620 630 640 650 660 60 70 80 90 100 110 mKIAA1 CLLMSSGIWQRGKEEEGVYGFLIEDIRKEVQRASKLKCTVCKKNGASIGCVVPTCKRSYH : . :. ... :..: ..... : :. ...: .: : ::..:: . .: ..: mKIAA0 CAIWSAEVFE---ENDGS----LKNVHAAVARGRQMRCELCLKPGATVGCCLSSCLSNFH 670 680 690 700 710 120 130 140 150 160 170 mKIAA1 LPCGLQKECIFQFTDNFASFCWKHRPVQAITSNKYSSSLPCTICLEFVEPIPTYNILQSP . :. . :::: :. :: :: mKIAA0 FMCARASYCIFQ--DDKKVFCQKHTDLLDGKEIVTPDGFDVLRRVYVDFEGINFKRKFLT 720 730 740 750 760 770 >>mKIAA0292 ( 1725 res) mbg10230 (1725 aa) initn: 132 init1: 132 opt: 202 Z-score: 200.7 bits: 49.0 E(): 4.9e-06 Smith-Waterman score: 203; 32.258% identity (36.585% ungapped) in 93 aa overlap (53-144:1617-1699) 30 40 50 60 70 80 mKIAA1 NSQSLACVFCRKNDDCPNKYGEKKTYEKWNFSVHYYCLLMSSGIWQR-GKEEEGVYGFLI : :: :.: ..::. :. .:: mKIAA0 SDTKPSVPTTSEGGPELELQIPELPLDSNEFWVHEGCILWANGIYLVCGR----LYG--- 1590 1600 1610 1620 1630 90 100 110 120 130 140 mKIAA1 EDIRKEVQRASKLKCTVCKKNGASIGCVVPTCKRSYHLPCGLQKECIFQFTDNFASFCWK ... .. : ..::. :.. ::..:: :. :: ::... .:... .::. : : mKIAA0 --LQEALEIAREMKCSHCQEAGATLGCYNKGCSFRYHYPCAIDADCLLH-EENFSVRCPK 1640 1650 1660 1670 1680 1690 150 160 170 180 190 200 mKIAA1 HRPVQAITSNKYSSSLPCTICLEFVEPIPTYNILQSPCCKNAWFHRDCLQVQAINAGVFF :.: mKIAA0 HKPPLPCPLPPLQNKTAKGSLSTEQSERG 1700 1710 1720 >>mKIAA1506 ( 1520 res) mbg19167 (1520 aa) initn: 153 init1: 122 opt: 192 Z-score: 191.2 bits: 47.1 E(): 1.7e-05 Smith-Waterman score: 192; 28.346% identity (31.034% ungapped) in 127 aa overlap (20-144:1004-1121) 10 20 30 40 mKIAA1 RRARGQTEVSRAAGKMNENKPD--NSQSLACVFCRKNDDCPNKYGEKKT ::: .. : ::... : . . mKIAA1 SIHIVIPKGTFKPPCEDEIDEFLKKLGTCLKPDPVPKDCRKCCFCHEEGDGLTDGPARLL 980 990 1000 1010 1020 1030 50 60 70 80 90 100 mKIAA1 YEKWNFSVHYYCLLMSSGIWQRGKEEEGVYGFLIEDIRKEVQRASKLKCTVCKKNGASIG .. :: : : :. .. : : :: ... ..:. ..::. :.:.::. : mKIAA1 NLDLDLWVHLNCALWSTEVY------ETQAGALI-NVELALRRGLQMKCVFCHKTGATSG 1040 1050 1060 1070 1080 110 120 130 140 150 160 mKIAA1 CVVPTCKRSYHLPCGLQKECIFQFTDNFASFCWKHRPVQAITSNKYSSSLPCTICLEFVE : : ::. :. . .:.: : :. . .: :.: mKIAA1 CHRFRCTNIYHFTCATKAQCMF-FKDK-TMLCPMHKPKGIHEQQLSYFAVFRRVYVQRDE 1090 1100 1110 1120 1130 1140 170 180 190 200 210 220 mKIAA1 PIPTYNILQSPCCKNAWFHRDCLQVQAINAGVFFFRCTLCNNTDIFQKEMLRMGIHIPEK mKIAA1 VRQIASIVQRGERDHTFRVGSLIFHTIGQLLPQQMQAFHSPKALFPVGYEASRLYWSTRY 1150 1160 1170 1180 1190 1200 >>mKIAA1820 ( 1518 res) mpm10033 (1518 aa) initn: 114 init1: 114 opt: 174 Z-score: 173.2 bits: 43.7 E(): 0.00017 Smith-Waterman score: 182; 30.973% identity (36.458% ungapped) in 113 aa overlap (32-143:1418-1514) 10 20 30 40 50 60 mKIAA1 RARGQTEVSRAAGKMNENKPDNSQSLACVFCRKNDDCPNKYGEKKTYEKWNFSVHYYCLL : : . :.. : : :.: :: : . mKIAA1 SRRLQSCYCCDGQGDGGEEVAQADKSRKHECSK--EAPTEPG-GDTQEHW---VHEACAV 1390 1400 1410 1420 1430 1440 70 80 90 100 110 120 mKIAA1 MSSGIWQ-RGKEEEGVYGFLIEDIRKEVQRASKLKCTVCKKNGASIGCVVPTCKRSYHLP .::.. :: ..: ... .. : . :: :.. ::.:.: : ..:: : mKIAA1 WTSGVYLVAGK----LFG-----LQEAMKVAVDMPCTSCHEPGATISCSYKGCIHTYHYP 1450 1460 1470 1480 1490 130 140 150 160 170 180 mKIAA1 CGLQKECIFQFTDNFASFCWKHRPVQAITSNKYSSSLPCTICLEFVEPIPTYNILQSPCC :. . : : . .::. : ::. mKIAA1 CANDTGCTF-IEENFTLKCPKHKRLPL 1500 1510 >>mKIAA0317 ( 826 res) mbg01653 (826 aa) initn: 120 init1: 64 opt: 164 Z-score: 166.1 bits: 41.5 E(): 0.00041 Smith-Waterman score: 164; 25.281% identity (27.439% ungapped) in 178 aa overlap (536-704:646-818) 510 520 530 540 550 560 mKIAA1 DVAQIIIKIDSATDLNILNSVISQHYNYLEVSGCLRLTTSLSDKFMLVKDILFYHVINRV ..: . .. ..:.. .. . :.. ..: mKIAA0 ILNNDMSEMELVFAEEKYNKSGQLDKIVELMTGGAQTPVTNANKIFYLNLLAQYRLASQV 620 630 640 650 660 670 570 580 590 600 610 620 mKIAA1 KAPFESFKQGLKTLGVLEKIQTYPEAFYKIL-CHKPENLSAKNLSDLFTIHSVADVQTLR : : : .::. : . . . : ..: : . :.:: : :.:. . . mKIAA0 KEEVEHFLKGLNELVPENLLAIFDENELELLMCGTGDI----NVSD-FKAHAVVVGGSWH 680 690 700 710 720 730 630 640 650 660 670 mKIAA1 FWNSYLKAIEDGKSATTMEDI---LIFATGCSSVPPTGFK---PSLSVEC--LHVDFPVA : .. .. . :. :.:.. : :.:: :..:: :: ::... : .:.: mKIAA0 FREKVMRWFWAVVSSLTQEELARLLQFTTGSSQLPPGGFAALCPSFQIIAAPTHSTLPTA 740 750 760 770 780 790 680 690 700 710 720 730 mKIAA1 DKYRNHLVLPATNTYEEFQENMDFTIRDTLRLEKEERSHILPRTLNVSSNEEMLI :.: ::. ..::: .. ....: . mKIAA0 HTCFNQLCLPTYDSYEEVHRMLQLAISEGCEGFGML 800 810 820 >>mKIAA0010 ( 1086 res) mbg01752 (1086 aa) initn: 131 init1: 74 opt: 145 Z-score: 145.8 bits: 38.2 E(): 0.0056 Smith-Waterman score: 151; 23.279% identity (26.692% ungapped) in 305 aa overlap (412-686:766-1061) 390 400 410 420 430 mKIAA1 KANVWRSALEQFQSQKFNPSCSIDVVYVNGNEVGSQHLGSKQEFLSHLMHHL--ENSSVF .:.: . : .:::..:.. :.. : mKIAA0 YEDAYDKLSPENEPDLKKRIRVHLLNAHGLDEAGIDGGGIFREFLNELLKSGFNPNQGFF 740 750 760 770 780 790 440 450 460 470 480 mKIAA1 ----EGSLAKNLSLNSQAVKENL---YYEVGKMLAISLVHGG----PSPGFFSETLFNCL :: : : . .. : ... :: .:.::. .: .. : ::: :.. mKIAA0 KTTNEGLLYPNPA-AQMLVGDSFARHYYFLGRMLGKALYENMLVELPFAGFFLSKLLGTS 800 810 820 830 840 850 490 500 510 520 530 540 mKIAA1 AYGPENTLPTLDDVSDIDVAQIIIKI--DSATDLNILNSVISQHYNYLEVS----GCLRL : . : .:: .. ...: ... .:.. .:... . .: : . mKIAA0 ADVDIHHLASLDP--EVYRNLLFLKSYEEDVEELGLNFTVVNNDLGEAQVVELKFGGKDI 860 870 880 890 900 910 550 560 570 580 590 600 mKIAA1 TTSLSDKFMLVKDILFYHVINRVKAPFESFKQGLKTLGVLEKIQTYPEAFYKILCHKPE- .. .... .. . :.. .... .:.::: .. :: .. . . ..: . mKIAA0 PVTGANRIAYIHLVADYRLNKQIRPHCLAFRQGLANVVSLEWLRMFDQQEIQVLISGAQV 920 930 940 950 960 970 610 620 630 640 650 mKIAA1 NLSAKNLSDLFTIHS---VADVQTLR-FWNSYLKAIEDGKSATTMEDILIFATGCSSVPP .: ..:.. :: .: :: ... :: ...: : . . .: :.:.:: : mKIAA0 PVSLEDLKS-FTNYSGGYSADHPVIKIFW----RVVE-GFTDEEKRKLLKFVTSCSRPPL 980 990 1000 1010 1020 660 670 680 690 700 710 mKIAA1 TGFKPSLSVECLH---VDF---PVADKYRNHLVLPATNTYEEFQENMDFTIRDTLRLEKE ::: . :.: :. :.:. : : :: mKIAA0 LGFKELYPAFCIHNGGSDLERLPTASTCMNLLKLPEFYDEALLRSKLLYAIECAAGFELS 1030 1040 1050 1060 1070 1080 720 730 mKIAA1 ERSHILPRTLNVSSNEEMLI 731 residues in 1 query sequences 1768286 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:41:22 2006 done: Mon Mar 27 10:41:23 2006 Scan time: 0.850 Display time: 0.200 Function used was FASTA [version 3.4t11 Apr 17, 2002]