# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mpm08299.fasta.nr -Q ../query/mKIAA4243.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA4243, 565 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7896283 sequences Expectation_n fit: rho(ln(x))= 7.0551+/-0.000217; mu= 4.5214+/- 0.012 mean_var=180.7354+/-33.913, 0's: 33 Z-trim: 87 B-trim: 0 in 0/66 Lambda= 0.095401 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|109492166|ref|XP_001081628.1| PREDICTED: simila ( 670) 3874 545.6 1.7e-152 gi|47117886|sp|Q04887.2|SOX9_MOUSE RecName: Full=T ( 507) 3530 498.1 2.5e-138 gi|26340712|dbj|BAC34018.1| unnamed protein produc ( 507) 3527 497.7 3.4e-138 gi|149054688|gb|EDM06505.1| rCG33659 [Rattus norve ( 507) 3488 492.4 1.4e-136 gi|1351096|sp|P48436.1|SOX9_HUMAN RecName: Full=Tr ( 509) 3423 483.4 6.8e-134 gi|30583965|gb|AAP36231.1| Homo sapiens SRY (sex d ( 510) 3423 483.4 6.9e-134 gi|61216727|sp|Q9BG91.1|SOX9_CALJA RecName: Full=T ( 509) 3419 482.9 1e-133 gi|12698702|gb|AAK01648.1| SOX9 [Hylobates sp. TIB ( 509) 3418 482.7 1.1e-133 gi|38503365|sp|Q9BG89.1|SOX9_PANTR RecName: Full=T ( 509) 3418 482.7 1.1e-133 gi|166078065|gb|ABY81084.1| SOX9 protein [Canis lu ( 513) 3350 473.4 7.3e-131 gi|61216612|sp|Q7YRJ7.1|SOX9_CANFA RecName: Full=T ( 513) 3339 471.9 2.1e-130 gi|3024633|sp|O18896.1|SOX9_PIG RecName: Full=Tran ( 509) 3321 469.4 1.2e-129 gi|126308526|ref|XP_001370056.1| PREDICTED: simila ( 512) 3185 450.7 5e-124 gi|149485783|ref|XP_001506094.1| PREDICTED: simila ( 508) 3035 430.0 8.1e-118 gi|117307493|dbj|BAF36483.1| SRY-box 9 [Trimeresur ( 463) 2804 398.2 2.8e-108 gi|194380472|dbj|BAG58389.1| unnamed protein produ ( 445) 2398 342.3 1.8e-91 gi|4336832|gb|AAD17974.1| SOX9 [Alligator mississi ( 495) 2322 331.9 2.8e-88 gi|196128947|gb|ACG70782.1| HMG-box containing pro ( 492) 2321 331.7 3e-88 gi|62860559|gb|AAY16521.1| SRY sex determining reg ( 489) 2306 329.7 1.3e-87 gi|2982740|dbj|BAA25296.1| SOX9 [Gallus gallus] ( 494) 2280 326.1 1.5e-86 gi|62860563|gb|AAY16523.1| SRY sex determining reg ( 495) 2276 325.5 2.2e-86 gi|2506521|sp|P48434.2|SOX9_CHICK RecName: Full=Tr ( 494) 2268 324.4 4.8e-86 gi|113367023|gb|ABI34568.1| sox9 [Bufo gargarizans ( 481) 2160 309.6 1.4e-81 gi|7707826|dbj|BAA95427.1| sox9 alpha [Rana rugosa ( 482) 2144 307.4 6.5e-81 gi|50253596|gb|AAT72000.1| sox9 [Xenopus tropicali ( 482) 2118 303.8 7.7e-80 gi|11526785|gb|AAG36779.1| Sox9 [Eublepharis macul ( 490) 2112 303.0 1.4e-79 gi|110835872|emb|CAH10150.1| transcription factor ( 481) 2109 302.5 1.8e-79 gi|213623669|gb|AAI70058.1| Transcription factor S ( 477) 2104 301.8 2.9e-79 gi|213626763|gb|AAI70060.1| Transcription factor S ( 477) 2095 300.6 6.9e-79 gi|49904068|gb|AAH76783.1| Sox9b protein [Xenopus ( 476) 2092 300.2 9.2e-79 gi|14581669|gb|AAK61366.1| transcription factor SO ( 477) 2078 298.3 3.5e-78 gi|195364277|gb|ACF95883.1| SOX9 [Pleurodeles walt ( 479) 2048 294.1 6.1e-77 gi|84380305|gb|ABC58685.1| HMG box protein SoxE3 [ ( 539) 1929 277.8 5.6e-72 gi|12003242|gb|AAG43497.1|AF209872_1 SOX9 alpha2 [ ( 492) 1914 275.7 2.2e-71 gi|146747219|gb|ABQ44208.1| SRY-box containing gen ( 321) 1909 274.8 2.7e-71 gi|195537625|dbj|BAG67029.1| SoxE protein [Lethent ( 446) 1903 274.1 5.9e-71 gi|58465464|gb|AAW78521.1| transcription factor So ( 432) 1890 272.3 2e-70 gi|47219061|emb|CAG00200.1| unnamed protein produc ( 484) 1876 270.5 8.2e-70 gi|2780750|dbj|BAA24365.1| SOX9 [Oncorhynchus myki ( 488) 1865 269.0 2.4e-69 gi|164682555|gb|ABY66377.1| SOX9 [Oreochromis aure ( 500) 1860 268.3 3.9e-69 gi|13278540|gb|AAH04064.1| Sox9 protein [Mus muscu ( 262) 1852 266.9 5.4e-69 gi|33415942|gb|AAQ18508.1| transcription factor So ( 489) 1847 266.5 1.3e-68 gi|110611206|gb|ABG77973.1| Sox9 [Poecilia reticul ( 480) 1845 266.2 1.6e-68 gi|47215274|emb|CAF97001.1| unnamed protein produc ( 495) 1840 265.5 2.6e-68 gi|223648434|gb|ACN10975.1| Transcription factor S ( 490) 1839 265.4 2.8e-68 gi|16945893|gb|AAL32172.1|AF329945_3 transcription ( 484) 1835 264.8 4.1e-68 gi|14290107|gb|AAK59254.1| HMG box transcription f ( 482) 1833 264.6 5e-68 gi|193735434|gb|AAP84605.3| transcription factor S ( 479) 1820 262.8 1.7e-67 gi|62082628|gb|AAX62151.1| Sry-box containing prot ( 476) 1816 262.2 2.5e-67 gi|219567002|dbj|BAH05019.1| HMG box transcription ( 476) 1816 262.2 2.5e-67 >>gi|109492166|ref|XP_001081628.1| PREDICTED: similar to (670 aa) initn: 3874 init1: 3874 opt: 3874 Z-score: 2894.1 bits: 545.6 E(): 1.7e-152 Smith-Waterman score: 3874; 98.401% identity (99.112% similar) in 563 aa overlap (3-565:108-670) 10 20 30 mKIAA4 DPPPSASAKCPPPQPGDAPTSPGAVRSASASG :::::::: ::::::::::::::::::::: gi|109 SSPGFVLCFPSLLLRSDSPSPGLERATEHWPPSASAKCSPPQPGDAPTSPGAVRSASASG 80 90 100 110 120 130 40 50 60 70 80 90 mKIAA4 QLREEEPQPPRLLAFPGHPPPAPGSRMNLLDPFMKMTDEQEKGLSGAPSPTMSEDSAGSP :::::::: ::::.:::::::::::::::::::::::::::::::::::::::::::::: gi|109 QLREEEPQQPRLLSFPGHPPPAPGSRMNLLDPFMKMTDEQEKGLSGAPSPTMSEDSAGSP 140 150 160 170 180 190 100 110 120 130 140 150 mKIAA4 CPSGSGSDTENTRPQENTFPKGEPDLKKESEEDKFPVCIREAVSQVLKGYDWTLVPMPVR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 CPSGSGSDTENTRPQENTFPKGEPDLKKESEEDKFPVCIREAVSQVLKGYDWTLVPMPVR 200 210 220 230 240 250 160 170 180 190 200 210 mKIAA4 VNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESEKRPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESEKRPF 260 270 280 290 300 310 220 230 240 250 260 270 mKIAA4 VEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQAEAEEATEQTHISPNAIFKALQADSPHS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQAEAEEATEQTHISPNAIFKALQADSPHS 320 330 340 350 360 370 280 290 300 310 320 330 mKIAA4 SSGMSEVHSPGEHSGQSQGPPTPPTTPKTDVQAGKVDLKREGRPLAEGGRQPPIDFRDVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SSGMSEVHSPGEHSGQSQGPPTPPTTPKTDVQAGKVDLKREGRPLAEGGRQPPIDFRDVD 380 390 400 410 420 430 340 350 360 370 380 390 mKIAA4 IGELSSDVISNIETFDVNEFDQYLPPNGHPGVPATHGQVTYTGSYGISSTAPTPATAGHV :::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::: gi|109 IGELSSDVISNIETFDVNEFDQYLPPNGHPGVPATHGQVSYTGSYGISSTAPTPATAGHV 440 450 460 470 480 490 400 410 420 430 440 450 mKIAA4 WMSKQQAPPPPPQQPPQAPQAPQAPPQQQAPPQQPQAPQQQQAHTLTTLSSEPGQSQRTH ::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::: gi|109 WMSKQQAPPPPPQQPPQAPQAPQAPPQQQAPPQPQQAPQQQQAHTLTTLSSEPGQSQRTH 500 510 520 530 540 550 460 470 480 490 500 510 mKIAA4 IKTEQLSPSHYSEQQQHSPQQISYSPFNLPHYSPSYPPITRSQYDYADHQNSGSYYSHAA ::::::::::::::::::::::::::::::::.:::: ::::::::.::::::::::::: gi|109 IKTEQLSPSHYSEQQQHSPQQISYSPFNLPHYNPSYPTITRSQYDYTDHQNSGSYYSHAA 560 570 580 590 600 610 520 530 540 550 560 mKIAA4 GQGSGLYSTFTYMNPAQRPMYTPIADTSGVPSIPQTHSPQHWEQPVYTQLTRP ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GQGSGLYSTFTYMNPAQRPMYTPIADTSGVPSIPQTHSPQHWEQPVYTQLTRP 620 630 640 650 660 670 >>gi|47117886|sp|Q04887.2|SOX9_MOUSE RecName: Full=Trans (507 aa) initn: 3530 init1: 3530 opt: 3530 Z-score: 2639.7 bits: 498.1 E(): 2.5e-138 Smith-Waterman score: 3530; 100.000% identity (100.000% similar) in 507 aa overlap (59-565:1-507) 30 40 50 60 70 80 mKIAA4 SASGQLREEEPQPPRLLAFPGHPPPAPGSRMNLLDPFMKMTDEQEKGLSGAPSPTMSEDS :::::::::::::::::::::::::::::: gi|471 MNLLDPFMKMTDEQEKGLSGAPSPTMSEDS 10 20 30 90 100 110 120 130 140 mKIAA4 AGSPCPSGSGSDTENTRPQENTFPKGEPDLKKESEEDKFPVCIREAVSQVLKGYDWTLVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|471 AGSPCPSGSGSDTENTRPQENTFPKGEPDLKKESEEDKFPVCIREAVSQVLKGYDWTLVP 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA4 MPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|471 MPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESE 100 110 120 130 140 150 210 220 230 240 250 260 mKIAA4 KRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQAEAEEATEQTHISPNAIFKALQAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|471 KRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQAEAEEATEQTHISPNAIFKALQAD 160 170 180 190 200 210 270 280 290 300 310 320 mKIAA4 SPHSSSGMSEVHSPGEHSGQSQGPPTPPTTPKTDVQAGKVDLKREGRPLAEGGRQPPIDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|471 SPHSSSGMSEVHSPGEHSGQSQGPPTPPTTPKTDVQAGKVDLKREGRPLAEGGRQPPIDF 220 230 240 250 260 270 330 340 350 360 370 380 mKIAA4 RDVDIGELSSDVISNIETFDVNEFDQYLPPNGHPGVPATHGQVTYTGSYGISSTAPTPAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|471 RDVDIGELSSDVISNIETFDVNEFDQYLPPNGHPGVPATHGQVTYTGSYGISSTAPTPAT 280 290 300 310 320 330 390 400 410 420 430 440 mKIAA4 AGHVWMSKQQAPPPPPQQPPQAPQAPQAPPQQQAPPQQPQAPQQQQAHTLTTLSSEPGQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|471 AGHVWMSKQQAPPPPPQQPPQAPQAPQAPPQQQAPPQQPQAPQQQQAHTLTTLSSEPGQS 340 350 360 370 380 390 450 460 470 480 490 500 mKIAA4 QRTHIKTEQLSPSHYSEQQQHSPQQISYSPFNLPHYSPSYPPITRSQYDYADHQNSGSYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|471 QRTHIKTEQLSPSHYSEQQQHSPQQISYSPFNLPHYSPSYPPITRSQYDYADHQNSGSYY 400 410 420 430 440 450 510 520 530 540 550 560 mKIAA4 SHAAGQGSGLYSTFTYMNPAQRPMYTPIADTSGVPSIPQTHSPQHWEQPVYTQLTRP ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|471 SHAAGQGSGLYSTFTYMNPAQRPMYTPIADTSGVPSIPQTHSPQHWEQPVYTQLTRP 460 470 480 490 500 >>gi|26340712|dbj|BAC34018.1| unnamed protein product [M (507 aa) initn: 3527 init1: 3527 opt: 3527 Z-score: 2637.5 bits: 497.7 E(): 3.4e-138 Smith-Waterman score: 3527; 99.803% identity (100.000% similar) in 507 aa overlap (59-565:1-507) 30 40 50 60 70 80 mKIAA4 SASGQLREEEPQPPRLLAFPGHPPPAPGSRMNLLDPFMKMTDEQEKGLSGAPSPTMSEDS :::::::::::::::::::::::::::::: gi|263 MNLLDPFMKMTDEQEKGLSGAPSPTMSEDS 10 20 30 90 100 110 120 130 140 mKIAA4 AGSPCPSGSGSDTENTRPQENTFPKGEPDLKKESEEDKFPVCIREAVSQVLKGYDWTLVP :::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::: gi|263 AGSPCPSGSGSDTENTRPQENTFPKGEPDLKRESEEDKFPVCIREAVSQVLKGYDWTLVP 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA4 MPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 MPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESE 100 110 120 130 140 150 210 220 230 240 250 260 mKIAA4 KRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQAEAEEATEQTHISPNAIFKALQAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 KRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQAEAEEATEQTHISPNAIFKALQAD 160 170 180 190 200 210 270 280 290 300 310 320 mKIAA4 SPHSSSGMSEVHSPGEHSGQSQGPPTPPTTPKTDVQAGKVDLKREGRPLAEGGRQPPIDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 SPHSSSGMSEVHSPGEHSGQSQGPPTPPTTPKTDVQAGKVDLKREGRPLAEGGRQPPIDF 220 230 240 250 260 270 330 340 350 360 370 380 mKIAA4 RDVDIGELSSDVISNIETFDVNEFDQYLPPNGHPGVPATHGQVTYTGSYGISSTAPTPAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 RDVDIGELSSDVISNIETFDVNEFDQYLPPNGHPGVPATHGQVTYTGSYGISSTAPTPAT 280 290 300 310 320 330 390 400 410 420 430 440 mKIAA4 AGHVWMSKQQAPPPPPQQPPQAPQAPQAPPQQQAPPQQPQAPQQQQAHTLTTLSSEPGQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 AGHVWMSKQQAPPPPPQQPPQAPQAPQAPPQQQAPPQQPQAPQQQQAHTLTTLSSEPGQS 340 350 360 370 380 390 450 460 470 480 490 500 mKIAA4 QRTHIKTEQLSPSHYSEQQQHSPQQISYSPFNLPHYSPSYPPITRSQYDYADHQNSGSYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 QRTHIKTEQLSPSHYSEQQQHSPQQISYSPFNLPHYSPSYPPITRSQYDYADHQNSGSYY 400 410 420 430 440 450 510 520 530 540 550 560 mKIAA4 SHAAGQGSGLYSTFTYMNPAQRPMYTPIADTSGVPSIPQTHSPQHWEQPVYTQLTRP ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 SHAAGQGSGLYSTFTYMNPAQRPMYTPIADTSGVPSIPQTHSPQHWEQPVYTQLTRP 460 470 480 490 500 >>gi|149054688|gb|EDM06505.1| rCG33659 [Rattus norvegicu (507 aa) initn: 3488 init1: 3488 opt: 3488 Z-score: 2608.5 bits: 492.4 E(): 1.4e-136 Smith-Waterman score: 3488; 98.817% identity (99.408% similar) in 507 aa overlap (59-565:1-507) 30 40 50 60 70 80 mKIAA4 SASGQLREEEPQPPRLLAFPGHPPPAPGSRMNLLDPFMKMTDEQEKGLSGAPSPTMSEDS :::::::::::::::::::::::::::::: gi|149 MNLLDPFMKMTDEQEKGLSGAPSPTMSEDS 10 20 30 90 100 110 120 130 140 mKIAA4 AGSPCPSGSGSDTENTRPQENTFPKGEPDLKKESEEDKFPVCIREAVSQVLKGYDWTLVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 AGSPCPSGSGSDTENTRPQENTFPKGEPDLKKESEEDKFPVCIREAVSQVLKGYDWTLVP 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA4 MPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 MPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESE 100 110 120 130 140 150 210 220 230 240 250 260 mKIAA4 KRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQAEAEEATEQTHISPNAIFKALQAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 KRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQAEAEEATEQTHISPNAIFKALQAD 160 170 180 190 200 210 270 280 290 300 310 320 mKIAA4 SPHSSSGMSEVHSPGEHSGQSQGPPTPPTTPKTDVQAGKVDLKREGRPLAEGGRQPPIDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SPHSSSGMSEVHSPGEHSGQSQGPPTPPTTPKTDVQAGKVDLKREGRPLAEGGRQPPIDF 220 230 240 250 260 270 330 340 350 360 370 380 mKIAA4 RDVDIGELSSDVISNIETFDVNEFDQYLPPNGHPGVPATHGQVTYTGSYGISSTAPTPAT :::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::: gi|149 RDVDIGELSSDVISNIETFDVNEFDQYLPPNGHPGVPATHGQVSYTGSYGISSTAPTPAT 280 290 300 310 320 330 390 400 410 420 430 440 mKIAA4 AGHVWMSKQQAPPPPPQQPPQAPQAPQAPPQQQAPPQQPQAPQQQQAHTLTTLSSEPGQS ::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::: gi|149 AGHVWMSKQQAPPPPPQQPPQAPQAPQAPPQQQAPPQPQQAPQQQQAHTLTTLSSEPGQS 340 350 360 370 380 390 450 460 470 480 490 500 mKIAA4 QRTHIKTEQLSPSHYSEQQQHSPQQISYSPFNLPHYSPSYPPITRSQYDYADHQNSGSYY ::::::::::::::::::::::::::::::::::::.:::: ::::::::.::::::::: gi|149 QRTHIKTEQLSPSHYSEQQQHSPQQISYSPFNLPHYNPSYPTITRSQYDYTDHQNSGSYY 400 410 420 430 440 450 510 520 530 540 550 560 mKIAA4 SHAAGQGSGLYSTFTYMNPAQRPMYTPIADTSGVPSIPQTHSPQHWEQPVYTQLTRP ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SHAAGQGSGLYSTFTYMNPAQRPMYTPIADTSGVPSIPQTHSPQHWEQPVYTQLTRP 460 470 480 490 500 >>gi|1351096|sp|P48436.1|SOX9_HUMAN RecName: Full=Transc (509 aa) initn: 2646 init1: 2506 opt: 3423 Z-score: 2560.1 bits: 483.4 E(): 6.8e-134 Smith-Waterman score: 3423; 97.053% identity (98.232% similar) in 509 aa overlap (59-565:1-509) 30 40 50 60 70 80 mKIAA4 SASGQLREEEPQPPRLLAFPGHPPPAPGSRMNLLDPFMKMTDEQEKGLSGAPSPTMSEDS :::::::::::::::::::::::::::::: gi|135 MNLLDPFMKMTDEQEKGLSGAPSPTMSEDS 10 20 30 90 100 110 120 130 140 mKIAA4 AGSPCPSGSGSDTENTRPQENTFPKGEPDLKKESEEDKFPVCIREAVSQVLKGYDWTLVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|135 AGSPCPSGSGSDTENTRPQENTFPKGEPDLKKESEEDKFPVCIREAVSQVLKGYDWTLVP 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA4 MPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|135 MPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESE 100 110 120 130 140 150 210 220 230 240 250 260 mKIAA4 KRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQAEAEEATEQTHISPNAIFKALQAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|135 KRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQAEAEEATEQTHISPNAIFKALQAD 160 170 180 190 200 210 270 280 290 300 310 320 mKIAA4 SPHSSSGMSEVHSPGEHSGQSQGPPTPPTTPKTDVQAGKVDLKREGRPLAEGGRQPPIDF :::::::::::::::::::::::::::::::::::: ::.::::::::: :::::::::: gi|135 SPHSSSGMSEVHSPGEHSGQSQGPPTPPTTPKTDVQPGKADLKREGRPLPEGGRQPPIDF 220 230 240 250 260 270 330 340 350 360 370 380 mKIAA4 RDVDIGELSSDVISNIETFDVNEFDQYLPPNGHPGVPATHGQVTYTGSYGISSTAPTPAT ::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::. gi|135 RDVDIGELSSDVISNIETFDVNEFDQYLPPNGHPGVPATHGQVTYTGSYGISSTAATPAS 280 290 300 310 320 330 390 400 410 420 430 440 mKIAA4 AGHVWMSKQQAPPPPPQQPPQAPQAPQAPPQQQA-PPQQPQAPQQQ-QAHTLTTLSSEPG ::::::::::::::::::::::: ::::::: :: ::::: :: :: ::::::::::::: gi|135 AGHVWMSKQQAPPPPPQQPPQAPPAPQAPPQPQAAPPQQPAAPPQQPQAHTLTTLSSEPG 340 350 360 370 380 390 450 460 470 480 490 500 mKIAA4 QSQRTHIKTEQLSPSHYSEQQQHSPQQISYSPFNLPHYSPSYPPITRSQYDYADHQNSGS ::::::::::::::::::::::::::::.:::::::::::::::::::::::.:::::.: gi|135 QSQRTHIKTEQLSPSHYSEQQQHSPQQIAYSPFNLPHYSPSYPPITRSQYDYTDHQNSSS 400 410 420 430 440 450 510 520 530 540 550 560 mKIAA4 YYSHAAGQGSGLYSTFTYMNPAQRPMYTPIADTSGVPSIPQTHSPQHWEQPVYTQLTRP :::::::::.::::::::::::::::::::::::::::::::::::::::::::::::: gi|135 YYSHAAGQGTGLYSTFTYMNPAQRPMYTPIADTSGVPSIPQTHSPQHWEQPVYTQLTRP 460 470 480 490 500 >>gi|30583965|gb|AAP36231.1| Homo sapiens SRY (sex deter (510 aa) initn: 2646 init1: 2506 opt: 3423 Z-score: 2560.1 bits: 483.4 E(): 6.9e-134 Smith-Waterman score: 3423; 97.053% identity (98.232% similar) in 509 aa overlap (59-565:1-509) 30 40 50 60 70 80 mKIAA4 SASGQLREEEPQPPRLLAFPGHPPPAPGSRMNLLDPFMKMTDEQEKGLSGAPSPTMSEDS :::::::::::::::::::::::::::::: gi|305 MNLLDPFMKMTDEQEKGLSGAPSPTMSEDS 10 20 30 90 100 110 120 130 140 mKIAA4 AGSPCPSGSGSDTENTRPQENTFPKGEPDLKKESEEDKFPVCIREAVSQVLKGYDWTLVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 AGSPCPSGSGSDTENTRPQENTFPKGEPDLKKESEEDKFPVCIREAVSQVLKGYDWTLVP 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA4 MPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 MPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESE 100 110 120 130 140 150 210 220 230 240 250 260 mKIAA4 KRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQAEAEEATEQTHISPNAIFKALQAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 KRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQAEAEEATEQTHISPNAIFKALQAD 160 170 180 190 200 210 270 280 290 300 310 320 mKIAA4 SPHSSSGMSEVHSPGEHSGQSQGPPTPPTTPKTDVQAGKVDLKREGRPLAEGGRQPPIDF :::::::::::::::::::::::::::::::::::: ::.::::::::: :::::::::: gi|305 SPHSSSGMSEVHSPGEHSGQSQGPPTPPTTPKTDVQPGKADLKREGRPLPEGGRQPPIDF 220 230 240 250 260 270 330 340 350 360 370 380 mKIAA4 RDVDIGELSSDVISNIETFDVNEFDQYLPPNGHPGVPATHGQVTYTGSYGISSTAPTPAT ::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::. gi|305 RDVDIGELSSDVISNIETFDVNEFDQYLPPNGHPGVPATHGQVTYTGSYGISSTAATPAS 280 290 300 310 320 330 390 400 410 420 430 440 mKIAA4 AGHVWMSKQQAPPPPPQQPPQAPQAPQAPPQQQA-PPQQPQAPQQQ-QAHTLTTLSSEPG ::::::::::::::::::::::: ::::::: :: ::::: :: :: ::::::::::::: gi|305 AGHVWMSKQQAPPPPPQQPPQAPPAPQAPPQPQAAPPQQPAAPPQQPQAHTLTTLSSEPG 340 350 360 370 380 390 450 460 470 480 490 500 mKIAA4 QSQRTHIKTEQLSPSHYSEQQQHSPQQISYSPFNLPHYSPSYPPITRSQYDYADHQNSGS ::::::::::::::::::::::::::::.:::::::::::::::::::::::.:::::.: gi|305 QSQRTHIKTEQLSPSHYSEQQQHSPQQIAYSPFNLPHYSPSYPPITRSQYDYTDHQNSSS 400 410 420 430 440 450 510 520 530 540 550 560 mKIAA4 YYSHAAGQGSGLYSTFTYMNPAQRPMYTPIADTSGVPSIPQTHSPQHWEQPVYTQLTRP :::::::::.::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 YYSHAAGQGTGLYSTFTYMNPAQRPMYTPIADTSGVPSIPQTHSPQHWEQPVYTQLTRPL 460 470 480 490 500 510 >>gi|61216727|sp|Q9BG91.1|SOX9_CALJA RecName: Full=Trans (509 aa) initn: 2642 init1: 2502 opt: 3419 Z-score: 2557.1 bits: 482.9 E(): 1e-133 Smith-Waterman score: 3419; 97.053% identity (98.035% similar) in 509 aa overlap (59-565:1-509) 30 40 50 60 70 80 mKIAA4 SASGQLREEEPQPPRLLAFPGHPPPAPGSRMNLLDPFMKMTDEQEKGLSGAPSPTMSEDS :::::::::::::::::::::::::::::: gi|612 MNLLDPFMKMTDEQEKGLSGAPSPTMSEDS 10 20 30 90 100 110 120 130 140 mKIAA4 AGSPCPSGSGSDTENTRPQENTFPKGEPDLKKESEEDKFPVCIREAVSQVLKGYDWTLVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|612 AGSPCPSGSGSDTENTRPQENTFPKGEPDLKKESEEDKFPVCIREAVSQVLKGYDWTLVP 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA4 MPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|612 MPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESE 100 110 120 130 140 150 210 220 230 240 250 260 mKIAA4 KRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQAEAEEATEQTHISPNAIFKALQAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|612 KRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQAEAEEATEQTHISPNAIFKALQAD 160 170 180 190 200 210 270 280 290 300 310 320 mKIAA4 SPHSSSGMSEVHSPGEHSGQSQGPPTPPTTPKTDVQAGKVDLKREGRPLAEGGRQPPIDF :::::::::::::::::::::::::::::::::::: ::.::::::::: :::::::::: gi|612 SPHSSSGMSEVHSPGEHSGQSQGPPTPPTTPKTDVQPGKADLKREGRPLPEGGRQPPIDF 220 230 240 250 260 270 330 340 350 360 370 380 mKIAA4 RDVDIGELSSDVISNIETFDVNEFDQYLPPNGHPGVPATHGQVTYTGSYGISSTAPTPAT ::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::: gi|612 RDVDIGELSSDVISNIETFDVNEFDQYLPPNGHPGVPATHGQVTYTGSYGISSTAATPAG 280 290 300 310 320 330 390 400 410 420 430 440 mKIAA4 AGHVWMSKQQAPPPPPQQPPQAPQAPQAPPQQQA-PPQQPQAPQQQ-QAHTLTTLSSEPG ::::::::::::::::::::::: ::::::: :: ::::: :: :: ::::::::::::: gi|612 AGHVWMSKQQAPPPPPQQPPQAPPAPQAPPQPQAAPPQQPAAPPQQPQAHTLTTLSSEPG 340 350 360 370 380 390 450 460 470 480 490 500 mKIAA4 QSQRTHIKTEQLSPSHYSEQQQHSPQQISYSPFNLPHYSPSYPPITRSQYDYADHQNSGS ::::::::::::::::::::::::::::.:::::::::::::::::::::::.:::::.: gi|612 QSQRTHIKTEQLSPSHYSEQQQHSPQQIAYSPFNLPHYSPSYPPITRSQYDYTDHQNSSS 400 410 420 430 440 450 510 520 530 540 550 560 mKIAA4 YYSHAAGQGSGLYSTFTYMNPAQRPMYTPIADTSGVPSIPQTHSPQHWEQPVYTQLTRP :::::::::.::::::::::::::::::::::::::::::::::::::::::::::::: gi|612 YYSHAAGQGTGLYSTFTYMNPAQRPMYTPIADTSGVPSIPQTHSPQHWEQPVYTQLTRP 460 470 480 490 500 >>gi|12698702|gb|AAK01648.1| SOX9 [Hylobates sp. TIB-201 (509 aa) initn: 2641 init1: 2501 opt: 3418 Z-score: 2556.4 bits: 482.7 E(): 1.1e-133 Smith-Waterman score: 3418; 96.857% identity (98.232% similar) in 509 aa overlap (59-565:1-509) 30 40 50 60 70 80 mKIAA4 SASGQLREEEPQPPRLLAFPGHPPPAPGSRMNLLDPFMKMTDEQEKGLSGAPSPTMSEDS ::::::::::::::.::::::::::::::: gi|126 MNLLDPFMKMTDEQKKGLSGAPSPTMSEDS 10 20 30 90 100 110 120 130 140 mKIAA4 AGSPCPSGSGSDTENTRPQENTFPKGEPDLKKESEEDKFPVCIREAVSQVLKGYDWTLVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 AGSPCPSGSGSDTENTRPQENTFPKGEPDLKKESEEDKFPVCIREAVSQVLKGYDWTLVP 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA4 MPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 MPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESE 100 110 120 130 140 150 210 220 230 240 250 260 mKIAA4 KRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQAEAEEATEQTHISPNAIFKALQAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 KRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQAEAEEATEQTHISPNAIFKALQAD 160 170 180 190 200 210 270 280 290 300 310 320 mKIAA4 SPHSSSGMSEVHSPGEHSGQSQGPPTPPTTPKTDVQAGKVDLKREGRPLAEGGRQPPIDF :::::::::::::::::::::::::::::::::::: ::.::::::::: :::::::::: gi|126 SPHSSSGMSEVHSPGEHSGQSQGPPTPPTTPKTDVQPGKADLKREGRPLPEGGRQPPIDF 220 230 240 250 260 270 330 340 350 360 370 380 mKIAA4 RDVDIGELSSDVISNIETFDVNEFDQYLPPNGHPGVPATHGQVTYTGSYGISSTAPTPAT ::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::. gi|126 RDVDIGELSSDVISNIETFDVNEFDQYLPPNGHPGVPATHGQVTYTGSYGISSTAATPAS 280 290 300 310 320 330 390 400 410 420 430 440 mKIAA4 AGHVWMSKQQAPPPPPQQPPQAPQAPQAPPQQQA-PPQQPQAPQQQ-QAHTLTTLSSEPG ::::::::::::::::::::::: ::::::: :: ::::: :: :: ::::::::::::: gi|126 AGHVWMSKQQAPPPPPQQPPQAPPAPQAPPQPQAAPPQQPAAPPQQPQAHTLTTLSSEPG 340 350 360 370 380 390 450 460 470 480 490 500 mKIAA4 QSQRTHIKTEQLSPSHYSEQQQHSPQQISYSPFNLPHYSPSYPPITRSQYDYADHQNSGS ::::::::::::::::::::::::::::.:::::::::::::::::::::::.:::::.: gi|126 QSQRTHIKTEQLSPSHYSEQQQHSPQQIAYSPFNLPHYSPSYPPITRSQYDYTDHQNSSS 400 410 420 430 440 450 510 520 530 540 550 560 mKIAA4 YYSHAAGQGSGLYSTFTYMNPAQRPMYTPIADTSGVPSIPQTHSPQHWEQPVYTQLTRP :::::::::.::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 YYSHAAGQGTGLYSTFTYMNPAQRPMYTPIADTSGVPSIPQTHSPQHWEQPVYTQLTRP 460 470 480 490 500 >>gi|38503365|sp|Q9BG89.1|SOX9_PANTR RecName: Full=Trans (509 aa) initn: 2641 init1: 2501 opt: 3418 Z-score: 2556.4 bits: 482.7 E(): 1.1e-133 Smith-Waterman score: 3418; 96.857% identity (98.232% similar) in 509 aa overlap (59-565:1-509) 30 40 50 60 70 80 mKIAA4 SASGQLREEEPQPPRLLAFPGHPPPAPGSRMNLLDPFMKMTDEQEKGLSGAPSPTMSEDS :::::::::::::::::::::::::::::: gi|385 MNLLDPFMKMTDEQEKGLSGAPSPTMSEDS 10 20 30 90 100 110 120 130 140 mKIAA4 AGSPCPSGSGSDTENTRPQENTFPKGEPDLKKESEEDKFPVCIREAVSQVLKGYDWTLVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|385 AGSPCPSGSGSDTENTRPQENTFPKGEPDLKKESEEDKFPVCIREAVSQVLKGYDWTLVP 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA4 MPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESE :::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|385 MPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLGDQYPHLHNAELSKTLGKLWRLLNESE 100 110 120 130 140 150 210 220 230 240 250 260 mKIAA4 KRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQAEAEEATEQTHISPNAIFKALQAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|385 KRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQAEAEEATEQTHISPNAIFKALQAD 160 170 180 190 200 210 270 280 290 300 310 320 mKIAA4 SPHSSSGMSEVHSPGEHSGQSQGPPTPPTTPKTDVQAGKVDLKREGRPLAEGGRQPPIDF :::::::::::::::::::::::::::::::::::: ::.::::::::: :::::::::: gi|385 SPHSSSGMSEVHSPGEHSGQSQGPPTPPTTPKTDVQPGKADLKREGRPLPEGGRQPPIDF 220 230 240 250 260 270 330 340 350 360 370 380 mKIAA4 RDVDIGELSSDVISNIETFDVNEFDQYLPPNGHPGVPATHGQVTYTGSYGISSTAPTPAT ::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::. gi|385 RDVDIGELSSDVISNIETFDVNEFDQYLPPNGHPGVPATHGQVTYTGSYGISSTAATPAS 280 290 300 310 320 330 390 400 410 420 430 440 mKIAA4 AGHVWMSKQQAPPPPPQQPPQAPQAPQAPPQQQA-PPQQPQAPQQQ-QAHTLTTLSSEPG ::::::::::::::::::::::: ::::::: :: ::::: :: :: ::::::::::::: gi|385 AGHVWMSKQQAPPPPPQQPPQAPPAPQAPPQPQAAPPQQPAAPPQQPQAHTLTTLSSEPG 340 350 360 370 380 390 450 460 470 480 490 500 mKIAA4 QSQRTHIKTEQLSPSHYSEQQQHSPQQISYSPFNLPHYSPSYPPITRSQYDYADHQNSGS ::::::::::::::::::::::::::::.:::::::::::::::::::::::.:::::.: gi|385 QSQRTHIKTEQLSPSHYSEQQQHSPQQIAYSPFNLPHYSPSYPPITRSQYDYTDHQNSSS 400 410 420 430 440 450 510 520 530 540 550 560 mKIAA4 YYSHAAGQGSGLYSTFTYMNPAQRPMYTPIADTSGVPSIPQTHSPQHWEQPVYTQLTRP :::::::::.::::::::::::::::::::::::::::::::::::::::::::::::: gi|385 YYSHAAGQGTGLYSTFTYMNPAQRPMYTPIADTSGVPSIPQTHSPQHWEQPVYTQLTRP 460 470 480 490 500 >>gi|166078065|gb|ABY81084.1| SOX9 protein [Canis lupus (513 aa) initn: 2775 init1: 2421 opt: 3350 Z-score: 2505.7 bits: 473.4 E(): 7.3e-131 Smith-Waterman score: 3350; 95.127% identity (96.491% similar) in 513 aa overlap (59-565:1-513) 30 40 50 60 70 80 mKIAA4 SASGQLREEEPQPPRLLAFPGHPPPAPGSRMNLLDPFMKMTDEQEKGLSGAPSPTMSEDS :::::::::::::::::::::::::::::: gi|166 MNLLDPFMKMTDEQEKGLSGAPSPTMSEDS 10 20 30 90 100 110 120 130 140 mKIAA4 AGSPCPSGSGSDTENTRPQENTFPKGEPDLKKESEEDKFPVCIREAVSQVLKGYDWTLVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 AGSPCPSGSGSDTENTRPQENTFPKGEPDLKKESEEDKFPVCIREAVSQVLKGYDWTLVP 40 50 60 70 80 90 150 160 170 180 190 200 mKIAA4 MPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 MPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESE 100 110 120 130 140 150 210 220 230 240 250 260 mKIAA4 KRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQAEAEEATEQTHISPNAIFKALQAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 KRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQAEAEEATEQTHISPNAIFKALQAD 160 170 180 190 200 210 270 280 290 300 310 320 mKIAA4 SPHSSSGMSEVHSPGEHSGQSQGPPTPPTTPKTDVQAGKVDLKREGRPLAEGGRQPPIDF :::::::::::::::.:::::::::::::::::::: ::.::::::::: :::::::::: gi|166 SPHSSSGMSEVHSPGKHSGQSQGPPTPPTTPKTDVQPGKADLKREGRPLPEGGRQPPIDF 220 230 240 250 260 270 330 340 350 360 370 380 mKIAA4 RDVDIGELSSDVISNIETFDVNEFDQYLPPNGHPGVPATHGQVTYTGSYGISSTAPTPAT ::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::: gi|166 RDVDIGELSSDVISNIETFDVNEFDQYLPPNGHPGVPATHGQVTYTGSYGISSTAATPAG 280 290 300 310 320 330 390 400 410 420 430 440 mKIAA4 AGHVWMSKQQAPPPPP---QQPPQAP-QAPQAPPQQ-QAPPQ-QPQAPQQQQAHTLTTLS :::::::::::::::: :: :::: : :::::: ::::: :: :: : ::::: :: gi|166 AGHVWMSKQQAPPPPPPPPQQSPQAPPQPPQAPPQAPQAPPQPQPAPPQPQAAHTLTPLS 340 350 360 370 380 390 450 460 470 480 490 500 mKIAA4 SEPGQSQRTHIKTEQLSPSHYSEQQQHSPQQISYSPFNLPHYSPSYPPITRSQYDYADHQ :::::.::::::::::::::::::::::::::.::::.::::::::::::::::::.::: gi|166 SEPGQAQRTHIKTEQLSPSHYSEQQQHSPQQIAYSPFSLPHYSPSYPPITRSQYDYTDHQ 400 410 420 430 440 450 510 520 530 540 550 560 mKIAA4 NSGSYYSHAAGQGSGLYSTFTYMNPAQRPMYTPIADTSGVPSIPQTHSPQHWEQPVYTQL ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::: gi|166 NSGSYYSHAAGQGSSLYSTFTYMNPAQRPMYTPIADTSGVPSIPQTHSPQHWEQPVYTQL 460 470 480 490 500 510 mKIAA4 TRP ::: gi|166 TRP 565 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Wed Mar 18 07:09:53 2009 done: Wed Mar 18 07:17:08 2009 Total Scan time: 971.040 Total Display time: 0.170 Function used was FASTA [version 34.26.5 April 26, 2007]