FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0083.ptfa, 1078 aa vs ./tmplib.26680 library 1767939 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 4.5538+/-0.00449; mu= 18.0150+/- 0.302 mean_var=82.9833+/-18.718, 0's: 0 Z-trim: 5 B-trim: 67 in 1/35 Lambda= 0.1408 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0054 ( 1617 res) mbg06166 (1617) 186 49 7.4e-06 mKIAA1769 ( 1622 res) mtg00072 (1622) 181 48 1.5e-05 mKIAA0560 ( 1500 res) mbg02505 (1500) 180 48 1.6e-05 mKIAA0625 ( 778 res) mpm03100 ( 778) 168 45 5.9e-05 mKIAA1631 ( 1027 res) mej00871 (1027) 160 43 0.00022 >>mKIAA0054 ( 1617 res) mbg06166 (1617 aa) initn: 227 init1: 90 opt: 186 Z-score: 197.5 bits: 48.9 E(): 7.4e-06 Smith-Waterman score: 241; 25.056% identity (30.939% ungapped) in 447 aa overlap (643-1038:643-1055) 620 630 640 650 660 mKIAA0 IDFREPQFIAYLSSVLPHDAKDTVANILKGLNKPQRQAMKRVL--LSKDY--TLIVGMPG :: :..:. . :: . .::.: : mKIAA0 DNAVLFPDISMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQLPPVLIIGPYG 620 630 640 650 660 670 670 680 690 700 710 mKIAA0 TGKTTTIC-ALVRILSACGFSVLLTSYTHSAVDNILLK--LAKF-KVG---------FLR :::: :. : .::. .:. ....::.: . .: : . ..: ..: mKIAA0 TGKTFTLAQAAKHILQQQETRILICTHSNSAAD-LYIKDYLHPYVEAGNPQARPLRVYFR 680 690 700 710 720 730 720 730 740 750 760 mKIAA0 LGQSHKVHPDIQKFTEEEICRSRSIASLAHLEELYNSHPIVATT------CMGINHPIFS . ::: .... : ..: .. . :.. . . .:.: :. .: : mKIAA0 NRWVKTVHPVVHQYCL--ISSTQSTFQMPQKEDILKHRVVVVTLSTSQYLCQLDLEPGF- 740 750 760 770 780 770 780 790 800 810 820 mKIAA0 RKTFDFCIVDEASQISQPVCLGPLFFS---RRFVLVGDHQQLPPLVVNREARALGMSESL : ..:::.: . . :: .. :.::.:::.:: :.: .. :: .. :: mKIAA0 ---FTHVLLDEAAQAMECETIMPLALATKNTRIVLAGDHMQLSPFVYSEFARERNLHVSL 790 800 810 820 830 840 830 840 850 860 870 880 mKIAA0 FKRLERNESAV----VQLTVQYRMNRKIMSLSNKLTYAGKLECGSDRVANAVLALPNLKD . :: .. : . : .:: .. :.. ...: : ::: .. . : :: mKIAA0 LDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQ--------PAHKD 850 860 870 880 890 890 900 910 920 930 940 mKIAA0 ARLSLQLYADYSDSPWLAGVLEPDNPVCFLNTDKVPAPEQVENGGVSNVTEARLIVFLTS : ... ... : : .. . . :.. . :.:: : : .. mKIAA0 FY-PLTFFTARGED-----VQEKNSTAFYNNAEVFEVVERVE--------ELRRKWPVAW 900 910 920 930 940 950 960 970 980 990 1000 mKIAA0 TFIKAGCSPSDIGVIAPYRQQLRIISDLLARSSVGMVEVNTVDKYQGRDKSLILVSFVR- . : .:::..:: .:. : : .. .. :.:. : . ::.. ....: :: mKIAA0 GKLDDG----SIGVVTPYADQVFRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRT 950 960 970 980 990 1010 1020 1030 1040 mKIAA0 --------------------SNEDGTLGELLKDWRRLNVALTRAKHKLILLGSVSSLKRF :.:: : .:.... ::.:.:::. . ..:. .: mKIAA0 RHTCKHKQTPIKKKEQLLEDSTEDLDYG-FLSNYKLLNTAITRAQSLVAVVGDPVALCSI 1000 1010 1020 1030 1040 1050 1050 1060 1070 mKIAA0 PPLGTLFDHLNAEQLILDLPSREHESLSHILGDCQRD mKIAA0 GRCRKFWERFIALCHENHSLHGITFEQIKAQLEALELKKTYVLNPLAPEFIPRALRLQHS 1060 1070 1080 1090 1100 1110 >>mKIAA1769 ( 1622 res) mtg00072 (1622 aa) initn: 147 init1: 118 opt: 181 Z-score: 192.0 bits: 47.8 E(): 1.5e-05 Smith-Waterman score: 207; 26.545% identity (34.434% ungapped) in 275 aa overlap (795-1055:1379-1604) 770 780 790 800 810 820 mKIAA0 HPIFSRKTFDFCIVDEASQISQPVCLGPLFFSRR--FVLVGDHQQLPPLVVNREARALGM ::.. ::.:::.:: :.: ... ..::: mKIAA1 ITLHHRIRQAPNPYAAEIRKFDAQLREGKIFSKEDLVVLLGDHKQLRPVVKSEQLQSLGM 1350 1360 1370 1380 1390 1400 830 840 850 860 870 880 mKIAA0 SESLFKRLERNESAVVQLTVQYRMNRKIMSLSNKLTYAGKLECGSDRVANAVLALPNLKD ..:::.: .:. ...: .::::.. : :. . :.:::. :: :. mKIAA1 DRSLFERYHRD---AIMLDTQYRMHKDICSFPSVEFYGGKLKTWSD-----------LR- 1410 1420 1430 1440 1450 890 900 910 920 930 940 mKIAA0 ARLSLQLYADYSDSPWLAGVLEPDNPVCFLNTDKVPAPEQVENGGVSNVTEARLIVFLTS :: : . : . .: : . .: . :: .:.: . mKIAA1 -RL-----------PSILG--HTGKPSCSVIFGSVQGHEQ------------KLLVSTED 1460 1470 1480 950 960 970 980 990 1000 mKIAA0 TFIKAGCSPSDIGVIAPYRQQLRIISDLLARSSVGMVEVNTVDKYQGRDKSLILVSFVRS .. .: .. .. : :. :. .: : :... : :: . ..:: ::. mKIAA1 GNENSRANPEEVTQVVSVR-------GLMQRGVTG-VTVTSITKSQGSEWRYVIVSTVRT 1490 1500 1510 1520 1530 1010 1020 1030 1040 1050 mKIAA0 NEDGTLGEL-LKDW-----------RRLNVALTRAKHKLILLGSVSSLKRFPPLGTLFDH . . . :.: ...:::.:::.. : ..:. :. : :.: mKIAA1 CPRSDVDQRPTKSWLKKFLGFVVDPHQVNVAITRAQEALCIIGDHLLLRCCPLWHRLLDF 1540 1550 1560 1570 1580 1590 1060 1070 mKIAA0 LNAEQLILDLPSREHESLSHILGDCQRD .:.. mKIAA1 CEAQHSLVSAEKVRVQRKSALSS 1600 1610 1620 >>mKIAA0560 ( 1500 res) mbg02505 (1500 aa) initn: 236 init1: 71 opt: 180 Z-score: 191.3 bits: 47.6 E(): 1.6e-05 Smith-Waterman score: 300; 27.249% identity (32.188% ungapped) in 378 aa overlap (721-1074:1026-1369) 700 710 720 730 740 750 mKIAA0 LTSYTHSAVDNILLKLAKFKVGFLRLGQSHKVHPDIQKFTEEEICRSRSIASLAHLEELY :. ....: :. :: .. .: : mKIAA0 YFANAPQPIFKGRSYEEDMEIAEGCFRHIKKIFTQLEEFRASELLRS-GLDRSKYL--LV 1000 1010 1020 1030 1040 1050 760 770 780 790 mKIAA0 NSHPIVATTCMGINHPIFSRK-------TFDFCIVDEASQISQPVCLGPLF-------FS . :.: :: .: ..:. .: ...::.:: . . ::. :: mKIAA0 KEAKIIAMTC---THAALKRHDLVKLGFKYDNILMEEAAQILEIETFIPLLLQNPQDGFS 1060 1070 1080 1090 1100 800 810 820 830 840 850 mKIAA0 R--RFVLVGDHQQLPPLVVNRE-ARALGMSESLFKRLERNESAVVQLTVQYRMNRKIMSL : :....:::.::::.. : . .: .::: :. : .:.: .: : .. .: mKIAA0 RLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRVGVPTVDLDAQGRARASLCNL 1110 1120 1130 1140 1150 1160 860 870 880 890 900 910 mKIAA0 SN-KLTYAGKLECGSDRVANAVLALPNLKDARLSLQLYADYSDSPWLAGVLEPDNPVCFL : . :.: : ::... : .: . . . :: : . mKIAA0 YNWRYKNLGNLP--------HVQLLPEFSTANAGLLYDFQLINVEDFQGVGESE------ 1170 1180 1190 1200 1210 920 930 940 950 960 970 mKIAA0 NTDKVPAPEQVENGGVSNVTEARLIVFLTSTFIKAGCSPSDIGVIAPYRQQLRIISDLLA : : .: : ::. .: : . : . :.... : : ..: :.. mKIAA0 -----PNPYFYQNLG-----EAEYVVALFMYMCLLGYPADKISILTTYNGQKHLIRDIIN 1220 1230 1240 1250 1260 980 990 1000 1010 1020 mKIAA0 RSS-----VGMV-EVNTVDKYQGRDKSLILVSFVRSNEDGTLGELLKDWRRLNVALTRAK : .: .:.:::..::.... ::.:.::. : : .: ::: ::..::. mKIAA0 RRCGNNPLIGRPNKVTTVDRFQGQQNDYILLSLVRTRAVGHL----RDVRRLVVAMSRAR 1270 1280 1290 1300 1310 1320 1030 1040 1050 1060 1070 mKIAA0 HKLILLGSVSSLKRFPPLGTLFDHLNAEQLILDLPSREHESLSHILGDCQRD : ... :: .. : :..:.:. : : . : :. :. mKIAA0 LGLYIFARVSLFQNCFELTPAFSQLTARPLHLHIIPTEPFPTSRKNGERPPHEVQVIKNM 1330 1340 1350 1360 1370 1380 mKIAA0 PQMANFVYNMYMHLIQTTHHYHQTFLQLPPAMVEEGEEGQSQETEMEAEEETVSAQGNLT 1390 1400 1410 1420 1430 1440 >>mKIAA0625 ( 778 res) mpm03100 (778 aa) initn: 361 init1: 148 opt: 168 Z-score: 181.4 bits: 44.8 E(): 5.9e-05 Smith-Waterman score: 259; 28.846% identity (34.221% ungapped) in 312 aa overlap (773-1038:237-545) 750 760 770 780 790 800 mKIAA0 LAHLEELYNSHPIVATTCMGINHPIFSRKTFDFCIVDEASQISQPVCLGPLFFS-RRFVL :. :::::.: . :.::. ...: mKIAA0 ILESHVICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEVETLSPLIHRCNKLIL 210 220 230 240 250 260 810 820 830 840 850 mKIAA0 VGDHQQLPPLVVNREARALGMSESLFKR----LERN-------ESAVVQLTVQYRMNRKI ::: .:::: :.. .:. :...:.. : ::.: . :.:::.::::. : mKIAA0 VGDPKQLPPTVISMKAQEYGYDQSMMARFCKLLEENVEQNMIGRLPVLQLTIQYRMHPDI 270 280 290 300 310 320 860 870 880 890 900 mKIAA0 MSLSNKLTYAGKLECGSDRVANAV---LALPNLKDARLSLQLYADYSDSPWLAGVLEPDN . .. .: .:. ..:..... : ... .. :. .: : mKIAA0 CLFPSNYVYNKNLK--TNRLTESIRCSSEWPFQPYLVFDVGDGSERRDNDSYINVQEIKL 330 340 350 360 370 380 910 920 930 940 950 mKIAA0 PVCFLNTDKVPAPE-QVENGGVSNVTEARLIVF---LTSTFIKAGC-SPSDIGVI----- . ... : . . .: :. . .:. .. : . : : : .: .: mKIAA0 VMEIIKLIKEKRKDISFRNIGIITHYKAQKTMIQKDLEKEFDKKGLLQPIMMGESRQQDS 390 400 410 420 430 440 960 970 980 990 mKIAA0 -APYRQQ----LRIISDLLARSSV---------------GMVEVNTVDKYQGRDKSLILV : .:: . :: :. :.: : .::.::: .:::.:. :.: mKIAA0 EASKQQQKSSEFMHASDELGSSTVTQSGISSLENGATHTGPAEVDTVDAFQGRQKDCIIV 450 460 470 480 490 500 1000 1010 1020 1030 1040 1050 mKIAA0 SFVR-SNEDGTLGELLKDWRRLNVALTRAKHKLILLGSVSSLKRFPPLGTLFDHLNAEQL . :: : .:..: .: . .::::..::::..:..:: . .: mKIAA0 TCVRASAVQGSIG-FLASLQRLNVTITRAKYSLFILGHLRTLMENQHWYELIQDAQKRGA 510 520 530 540 550 560 1060 1070 mKIAA0 ILDLPSREHESLSHILGDCQRD mKIAA0 IIKTSDPNYRHDAMKILKTHPPATAPEAPRPQGGLPSNRLDSGLATTSFAASLYHTPSDT 570 580 590 600 610 620 >>mKIAA1631 ( 1027 res) mej00871 (1027 aa) initn: 302 init1: 82 opt: 160 Z-score: 171.2 bits: 43.3 E(): 0.00022 Smith-Waterman score: 316; 25.345% identity (30.061% ungapped) in 580 aa overlap (528-1049:414-960) 500 510 520 530 540 550 mKIAA0 NLVRTEPVSRVCDGQYLHNFQRKNGPMPATNLMAGDRI--ILSGEERKLFALS-KGYVKK ... ::.. .::.: .. .. ::.:.: mKIAA1 LDSVPMTWDPVDQNPRLLTLEVPGVAESRPSVLRGDHLFALLSSETQQDDPVTYKGFVHK 390 400 410 420 430 440 560 570 580 590 600 mKIAA0 MNKAAV-----TCLLDRNLSTLPATTVFRLDREERHGDISTPLGNLSKLMESTDPSKRLR .. : : ::.: .. : . : ..:. :: . .: : : mKIAA1 VELDRVKLSFSTSLLSRFVDGLTFKVNFTFNRQ--------PLRVQHRALELTG-----R 450 460 470 480 490 610 620 630 640 650 660 mKIAA0 ELIIDFREPQFIAYLSSVLPHDAKDTVANILKGLNKPQRQAMKRVLLSKDYT---LIVGM .. . : . :.:: :.: . . : : ::::... . .: : mKIAA1 WVLWPMLFP-VASRGVSLLPSDVKFKLYDRSLESNPEQLQAMKHIVRGTTRPAPYIIFGP 500 510 520 530 540 670 680 690 700 710 720 mKIAA0 PGTGKTTTICALVR--ILSACGFSVLLTSYTHSAVDNILLKL-AKFKVGFLRLGQSHK-- ::::::.:. .. . .: . ..:..: . .: ... .. :: . mKIAA1 PGTGKTVTLVEAIKQVVKHLPKAHILACAPSNSGADLLCQRLRVHLPSSIYRLLAPSRDI 550 560 570 580 590 600 730 740 750 760 770 mKIAA0 --VHPDIQKFTEEEICRSRSI-ASLAHLEE--LYNSHPIVATTCMGINHPIFSRKTFDFC : ::. . . ... . . ::.. . . :.:. .. . :: : mKIAA1 RMVPEDIKTCCNWDAKKGEYVYPAKKHLQQYRVLITTLITASRLVSAQFPI---DHFTHI 610 620 630 640 650 660 780 790 800 810 820 mKIAA0 IVDEASQISQP---VCLGPLFFSR-------RFVLVGDHQQLPPLVVNREARALGMSESL ..:::.. .: : .. :. . ..::.:: .:: :.. . : :.. :: mKIAA1 FIDEAGHCMEPESLVAIAGLMDVKETGNPGGQLVLAGDPRQLGPVLRSPLALKHGLGYSL 670 680 690 700 710 720 830 840 850 860 870 mKIAA0 FKRLERNESA------------VVQLTVQYRMNRKIMSLSNKLTYAGKLECGSDRVANAV ..:: .: ...: .:: . :... :.: : :.:. .: : mKIAA1 LERLLAYNSLYKKGPNGYDPQFITKLLRNYRSHPTILDIPNQLYYDGELQACADVVDRER 730 740 750 760 770 780 880 890 900 910 920 930 mKIAA0 LALPNLKDARLSLQLYADYSDSPWLAGVLEPDNPVCFLNTDKVPAPEQVENGGVSNVTEA . . : : . . : ..: :.: :: : . :.. . mKIAA1 FC----RWEGLPQQGFPIIFHGVMGKDEREGNSP-SFFN------PE--EAATVTSYLKQ 790 800 810 820 830 940 950 960 970 980 mKIAA0 RLIVFLTSTFIKAGCSPSDIGVIAPYRQQ---LRIISDLLARSSVGM-----VEVNTVDK : .: :: :: ..:::.:::.: .: : : :. ..:..:.. mKIAA1 LLAP--SSKKGKARLSPRNVGVISPYRKQVEKIRYCITKLDRELRGLDDIKDLKVGSVEE 840 850 860 870 880 890 990 1000 1010 1020 1030 mKIAA0 YQGRDKSLILVSFVRSNE-------DGTLGELLKDWRRLNVALTRAKHKLILLGSVSSLK .::...:.::.: :::.. : .:: .::. .:.:::.:::: ::..:. : mKIAA1 FQGQERSVILISTVRSSQSFVQLDLDFNLG-FLKNPKRFNVAVTRAKALLIVVGNPLLLG 900 910 920 930 940 950 1040 1050 1060 1070 mKIAA0 RFPPLGTLFDHLNAEQLILDLPSREHESLSHILGDCQRD . : :... mKIAA1 HDPDWKTFLEFCKENGGYTGCPFPAKLDLQQGQDLLQGLSKLSPSTSGPRRHQNLPQERE 960 970 980 990 1000 1010 1078 residues in 1 query sequences 1767939 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:11:52 2006 done: Mon Mar 27 10:11:53 2006 Scan time: 1.050 Display time: 0.280 Function used was FASTA [version 3.4t11 Apr 17, 2002]