# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mpm08036.fasta.nr -Q ../query/mKIAA1008.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1008, 451 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7919512 sequences Expectation_n fit: rho(ln(x))= 4.8594+/-0.000182; mu= 12.3859+/- 0.010 mean_var=67.9303+/-13.270, 0's: 44 Z-trim: 62 B-trim: 0 in 0/66 Lambda= 0.155612 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|148668130|gb|EDL00460.1| RIKEN cDNA 2810028N01, ( 946) 2621 597.7 4e-168 gi|166231533|sp|Q9CSH3.4|RRP44_MOUSE RecName: Full ( 958) 2621 597.7 4.1e-168 gi|148668131|gb|EDL00461.1| RIKEN cDNA 2810028N01, ( 781) 2613 595.8 1.2e-167 gi|149050096|gb|EDM02420.1| similar to mitotic con ( 939) 2585 589.6 1.1e-165 gi|187469071|gb|AAI66824.1| Dis3 protein [Rattus n ( 957) 2585 589.6 1.1e-165 gi|168278787|dbj|BAG11273.1| exosome complex exonu ( 928) 2489 568.1 3.3e-159 gi|33440520|gb|AAH56143.1| DIS3 mitotic control ho ( 958) 2489 568.1 3.4e-159 gi|159149063|dbj|BAF92610.1| DIS3 [Homo sapiens] ( 958) 2487 567.6 4.6e-159 gi|52545700|emb|CAH56266.1| hypothetical protein [ ( 958) 2481 566.3 1.2e-158 gi|71296758|gb|AAH38101.1| DIS3 protein [Homo sapi ( 796) 2468 563.3 7.7e-158 gi|149730276|ref|XP_001495267.1| PREDICTED: DIS3 m ( 958) 2467 563.1 1e-157 gi|75775553|gb|AAI04535.1| DIS3 protein [Bos tauru ( 628) 2450 559.2 1.1e-156 gi|20071792|gb|AAH27357.1| DIS3 mitotic control ho ( 566) 2436 556.0 8.7e-156 gi|148668132|gb|EDL00462.1| RIKEN cDNA 2810028N01, ( 588) 2436 556.0 8.9e-156 gi|126337588|ref|XP_001365109.1| PREDICTED: simila ( 959) 2402 548.5 2.6e-153 gi|171847251|gb|AAI61523.1| Dis3 protein [Xenopus ( 951) 2196 502.3 2.1e-139 gi|54035109|gb|AAH84092.1| LOC495005 protein [Xeno ( 953) 2186 500.0 1e-138 gi|194672086|ref|XP_001249406.2| PREDICTED: DIS3 m ( 940) 2132 487.9 4.5e-135 gi|26327903|dbj|BAC27692.1| unnamed protein produc ( 687) 2120 485.1 2.3e-134 gi|125804058|ref|XP_001336850.1| PREDICTED: DIS3 m ( 950) 2077 475.6 2.3e-131 gi|210131741|gb|EEA79409.1| hypothetical protein B ( 625) 1723 395.9 1.4e-107 gi|5262619|emb|CAB45749.1| hypothetical protein [H ( 632) 1706 392.1 2e-106 gi|215506779|gb|EEC16273.1| salivary protein Is3, ( 956) 1692 389.1 2.5e-105 gi|190585024|gb|EDV25093.1| hypothetical protein T ( 931) 1615 371.8 3.9e-100 gi|194185352|gb|EDW98963.1| GE23472 [Drosophila ya ( 982) 1588 365.8 2.7e-98 gi|156553452|ref|XP_001601829.1| PREDICTED: simila ( 985) 1588 365.8 2.7e-98 gi|194151385|gb|EDW66819.1| GJ23805 [Drosophila vi ( 979) 1586 365.3 3.7e-98 gi|194168510|gb|EDW83411.1| GK22331 [Drosophila wi ( 981) 1586 365.3 3.7e-98 gi|194121434|gb|EDW43477.1| GM26588 [Drosophila se ( 989) 1584 364.9 5e-98 gi|193893646|gb|EDV92512.1| GH18811 [Drosophila gr ( 979) 1582 364.5 6.8e-98 gi|194200634|gb|EDX14210.1| GD21090 [Drosophila si ( 957) 1580 364.0 9.1e-98 gi|190656642|gb|EDV53874.1| GG11280 [Drosophila er ( 982) 1577 363.3 1.5e-97 gi|15292611|gb|AAK93574.1| SD10981p [Drosophila me ( 982) 1574 362.7 2.4e-97 gi|193916738|gb|EDW15605.1| GI10069 [Drosophila mo ( 979) 1571 362.0 3.8e-97 gi|7301148|gb|AAF56281.1| Dis3 [Drosophila melanog ( 982) 1570 361.8 4.4e-97 gi|190618480|gb|EDV34004.1| GF20740 [Drosophila an ( 983) 1569 361.5 5.2e-97 gi|194111906|gb|EDW33949.1| GL21852 [Drosophila pe ( 978) 1549 357.0 1.2e-95 gi|198132293|gb|EAL28283.2| GA19573 [Drosophila ps ( 978) 1549 357.0 1.2e-95 gi|110761130|ref|XP_397381.3| PREDICTED: similar t ( 980) 1538 354.6 6.4e-95 gi|13446610|emb|CAC35051.1| putative exoribonuclea ( 983) 1509 348.1 5.9e-93 gi|167877510|gb|EDS40893.1| mitotic control protei ( 970) 1468 338.9 3.4e-90 gi|91088779|ref|XP_967442.1| PREDICTED: similar to ( 943) 1449 334.6 6.4e-89 gi|116128315|gb|EAA09476.3| AGAP005191-PA [Anophel ( 967) 1446 333.9 1e-88 gi|115660722|ref|XP_787332.2| PREDICTED: hypotheti (1412) 1393 322.1 5.3e-85 gi|108871997|gb|EAT36222.1| mitotic control protei ( 970) 1385 320.2 1.4e-84 gi|187028531|emb|CAP32286.1| C. briggsae CBR-DIS-3 (1019) 1332 308.3 5.5e-81 gi|163777265|gb|EDQ90882.1| predicted protein [Mon ( 951) 1327 307.2 1.1e-80 gi|221222479|sp|Q17632.2|RRP44_CAEEL RecName: Full ( 961) 1320 305.6 3.4e-80 gi|210105397|gb|EEA53409.1| hypothetical protein B ( 893) 1309 303.1 1.8e-79 gi|60462398|gb|EAL60619.1| putative exoribonucleas (1006) 1226 284.5 8e-74 >>gi|148668130|gb|EDL00460.1| RIKEN cDNA 2810028N01, iso (946 aa) initn: 2613 init1: 2613 opt: 2621 Z-score: 3174.6 bits: 597.7 E(): 4e-168 Smith-Waterman score: 2621; 98.250% identity (99.250% similar) in 400 aa overlap (52-451:177-576) 30 40 50 60 70 80 mKIAA1 KKKWQVSCQKTTIHVSSRLNTVPRYLNLKIVTYFSGEEYVKSLTANPELIDRLAYLSDEM . :. :::::::::::::::::::::::: gi|148 HLKRVAADSQLQVILITNDRKNKEKAVQEGIPAFTCEEYVKSLTANPELIDRLAYLSDEM 150 160 170 180 190 200 90 100 110 120 130 140 mKIAA1 NEIESGKIIFSEHLPLSKLQQGIKSGSYLQGTFRASRENYLEATVWIHGDKEEEKEILIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 NEIESGKIIFSEHLPLSKLQQGIKSGSYLQGTFRASRENYLEATVWIHGDKEEEKEILIQ 210 220 230 240 250 260 150 160 170 180 190 200 mKIAA1 GIKHLNRAVHEDIVAVELLPRSQWVAPSSVVLDDEGQNEDDVEKDEERELLLKTAVSEKM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GIKHLNRAVHEDIVAVELLPRSQWVAPSSVVLDDEGQNEDDVEKDEERELLLKTAVSEKM 270 280 290 300 310 320 210 220 230 240 250 260 mKIAA1 LRPTGRVVGIIKRNWRPYCGMLSKSDIKESRRHLFTPADKRIPRIRIETRQASALEGRRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LRPTGRVVGIIKRNWRPYCGMLSKSDIKESRRHLFTPADKRIPRIRIETRQASALEGRRI 330 340 350 360 370 380 270 280 290 300 310 320 mKIAA1 IVAIDGWPRNSRYPNGHFVKNLGDVGEKETETEVLLLEHDVPHQPFSQAVLSFLPRMPWS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 IVAIDGWPRNSRYPNGHFVKNLGDVGEKETETEVLLLEHDVPHQPFSQAVLSFLPRMPWS 390 400 410 420 430 440 330 340 350 360 370 380 mKIAA1 ITEEDMKNREDLRHLCVCSVDPPGCTDIDDALHCRELSNGNLEVGVHIADVSHFIRPGNA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ITEEDMKNREDLRHLCVCSVDPPGCTDIDDALHCRELSNGNLEVGVHIADVSHFIRPGNA 450 460 470 480 490 500 390 400 410 420 430 440 mKIAA1 LDQESARRGTTVYLCEKRIDMVPELLSSNLCSLRSNVDRLAFSCIWEMNHNAEILKTRFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LDQESARRGTTVYLCEKRIDMVPELLSSNLCSLRSNVDRLAFSCIWEMNHNAEILKTRFT 510 520 530 540 550 560 450 mKIAA1 KSVINSKVSV :::::::.:. gi|148 KSVINSKASLTYAEAQMRIDSAAMNDDITTSLRGLNQLAKILKKGRIEKGALTLSSPEIR 570 580 590 600 610 620 >>gi|166231533|sp|Q9CSH3.4|RRP44_MOUSE RecName: Full=Exo (958 aa) initn: 2613 init1: 2613 opt: 2621 Z-score: 3174.6 bits: 597.7 E(): 4.1e-168 Smith-Waterman score: 2621; 98.250% identity (99.250% similar) in 400 aa overlap (52-451:189-588) 30 40 50 60 70 80 mKIAA1 KKKWQVSCQKTTIHVSSRLNTVPRYLNLKIVTYFSGEEYVKSLTANPELIDRLAYLSDEM . :. :::::::::::::::::::::::: gi|166 HLKRVAADSQLQVILITNDRKNKEKAVQEGIPAFTCEEYVKSLTANPELIDRLAYLSDEM 160 170 180 190 200 210 90 100 110 120 130 140 mKIAA1 NEIESGKIIFSEHLPLSKLQQGIKSGSYLQGTFRASRENYLEATVWIHGDKEEEKEILIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 NEIESGKIIFSEHLPLSKLQQGIKSGSYLQGTFRASRENYLEATVWIHGDKEEEKEILIQ 220 230 240 250 260 270 150 160 170 180 190 200 mKIAA1 GIKHLNRAVHEDIVAVELLPRSQWVAPSSVVLDDEGQNEDDVEKDEERELLLKTAVSEKM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 GIKHLNRAVHEDIVAVELLPRSQWVAPSSVVLDDEGQNEDDVEKDEERELLLKTAVSEKM 280 290 300 310 320 330 210 220 230 240 250 260 mKIAA1 LRPTGRVVGIIKRNWRPYCGMLSKSDIKESRRHLFTPADKRIPRIRIETRQASALEGRRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 LRPTGRVVGIIKRNWRPYCGMLSKSDIKESRRHLFTPADKRIPRIRIETRQASALEGRRI 340 350 360 370 380 390 270 280 290 300 310 320 mKIAA1 IVAIDGWPRNSRYPNGHFVKNLGDVGEKETETEVLLLEHDVPHQPFSQAVLSFLPRMPWS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 IVAIDGWPRNSRYPNGHFVKNLGDVGEKETETEVLLLEHDVPHQPFSQAVLSFLPRMPWS 400 410 420 430 440 450 330 340 350 360 370 380 mKIAA1 ITEEDMKNREDLRHLCVCSVDPPGCTDIDDALHCRELSNGNLEVGVHIADVSHFIRPGNA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 ITEEDMKNREDLRHLCVCSVDPPGCTDIDDALHCRELSNGNLEVGVHIADVSHFIRPGNA 460 470 480 490 500 510 390 400 410 420 430 440 mKIAA1 LDQESARRGTTVYLCEKRIDMVPELLSSNLCSLRSNVDRLAFSCIWEMNHNAEILKTRFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 LDQESARRGTTVYLCEKRIDMVPELLSSNLCSLRSNVDRLAFSCIWEMNHNAEILKTRFT 520 530 540 550 560 570 450 mKIAA1 KSVINSKVSV :::::::.:. gi|166 KSVINSKASLTYAEAQMRIDSAAMNDDITTSLRGLNQLAKILKKGRIEKGALTLSSPEIR 580 590 600 610 620 630 >>gi|148668131|gb|EDL00461.1| RIKEN cDNA 2810028N01, iso (781 aa) initn: 2613 init1: 2613 opt: 2613 Z-score: 3166.1 bits: 595.8 E(): 1.2e-167 Smith-Waterman score: 2613; 99.492% identity (100.000% similar) in 394 aa overlap (58-451:18-411) 30 40 50 60 70 80 mKIAA1 SCQKTTIHVSSRLNTVPRYLNLKIVTYFSGEEYVKSLTANPELIDRLAYLSDEMNEIESG :::::::::::::::::::::::::::::: gi|148 PITRKSISIPSLMSTISEEYVKSLTANPELIDRLAYLSDEMNEIESG 10 20 30 40 90 100 110 120 130 140 mKIAA1 KIIFSEHLPLSKLQQGIKSGSYLQGTFRASRENYLEATVWIHGDKEEEKEILIQGIKHLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 KIIFSEHLPLSKLQQGIKSGSYLQGTFRASRENYLEATVWIHGDKEEEKEILIQGIKHLN 50 60 70 80 90 100 150 160 170 180 190 200 mKIAA1 RAVHEDIVAVELLPRSQWVAPSSVVLDDEGQNEDDVEKDEERELLLKTAVSEKMLRPTGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RAVHEDIVAVELLPRSQWVAPSSVVLDDEGQNEDDVEKDEERELLLKTAVSEKMLRPTGR 110 120 130 140 150 160 210 220 230 240 250 260 mKIAA1 VVGIIKRNWRPYCGMLSKSDIKESRRHLFTPADKRIPRIRIETRQASALEGRRIIVAIDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VVGIIKRNWRPYCGMLSKSDIKESRRHLFTPADKRIPRIRIETRQASALEGRRIIVAIDG 170 180 190 200 210 220 270 280 290 300 310 320 mKIAA1 WPRNSRYPNGHFVKNLGDVGEKETETEVLLLEHDVPHQPFSQAVLSFLPRMPWSITEEDM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 WPRNSRYPNGHFVKNLGDVGEKETETEVLLLEHDVPHQPFSQAVLSFLPRMPWSITEEDM 230 240 250 260 270 280 330 340 350 360 370 380 mKIAA1 KNREDLRHLCVCSVDPPGCTDIDDALHCRELSNGNLEVGVHIADVSHFIRPGNALDQESA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 KNREDLRHLCVCSVDPPGCTDIDDALHCRELSNGNLEVGVHIADVSHFIRPGNALDQESA 290 300 310 320 330 340 390 400 410 420 430 440 mKIAA1 RRGTTVYLCEKRIDMVPELLSSNLCSLRSNVDRLAFSCIWEMNHNAEILKTRFTKSVINS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RRGTTVYLCEKRIDMVPELLSSNLCSLRSNVDRLAFSCIWEMNHNAEILKTRFTKSVINS 350 360 370 380 390 400 450 mKIAA1 KVSV :.:. gi|148 KASLTYAEAQMRIDSAAMNDDITTSLRGLNQLAKILKKGRIEKGALTLSSPEIRFHMDSE 410 420 430 440 450 460 >>gi|149050096|gb|EDM02420.1| similar to mitotic control (939 aa) initn: 2577 init1: 2577 opt: 2585 Z-score: 3131.0 bits: 589.6 E(): 1.1e-165 Smith-Waterman score: 2585; 96.500% identity (98.750% similar) in 400 aa overlap (52-451:170-569) 30 40 50 60 70 80 mKIAA1 KKKWQVSCQKTTIHVSSRLNTVPRYLNLKIVTYFSGEEYVKSLTANPELIDRLAYLSDEM . :. :::::::::::::::::: ::::: gi|149 EHLKMSAENQLQVILITNDKKNKEKAAEEGIPAFTCEEYVKSLTANPELIDRLACLSDEM 140 150 160 170 180 190 90 100 110 120 130 140 mKIAA1 NEIESGKIIFSEHLPLSKLQQGIKSGSYLQGTFRASRENYLEATVWIHGDKEEEKEILIQ ::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::: gi|149 NEIESGKIIFSEHLPLSKLQQGIKSGSYLQGTFRASRENYLEATVWIHGDKEDEKEILIQ 200 210 220 230 240 250 150 160 170 180 190 200 mKIAA1 GIKHLNRAVHEDIVAVELLPRSQWVAPSSVVLDDEGQNEDDVEKDEERELLLKTAVSEKM :.::::::.:::::::::::.::::::::::: ::::::::::::::::::::::::::: gi|149 GLKHLNRAIHEDIVAVELLPKSQWVAPSSVVLHDEGQNEDDVEKDEERELLLKTAVSEKM 260 270 280 290 300 310 210 220 230 240 250 260 mKIAA1 LRPTGRVVGIIKRNWRPYCGMLSKSDIKESRRHLFTPADKRIPRIRIETRQASALEGRRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LRPTGRVVGIIKRNWRPYCGMLSKSDIKESRRHLFTPADKRIPRIRIETRQASALEGRRI 320 330 340 350 360 370 270 280 290 300 310 320 mKIAA1 IVAIDGWPRNSRYPNGHFVKNLGDVGEKETETEVLLLEHDVPHQPFSQAVLSFLPRMPWS :::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::: gi|149 IVAIDGWPRNSRYPNGHFVKNLGDVGEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWS 380 390 400 410 420 430 330 340 350 360 370 380 mKIAA1 ITEEDMKNREDLRHLCVCSVDPPGCTDIDDALHCRELSNGNLEVGVHIADVSHFIRPGNA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 ITEEDMKNREDLRHLCVCSVDPPGCTDIDDALHCRELSNGNLEVGVHIADVSHFIRPGNA 440 450 460 470 480 490 390 400 410 420 430 440 mKIAA1 LDQESARRGTTVYLCEKRIDMVPELLSSNLCSLRSNVDRLAFSCIWEMNHNAEILKTRFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LDQESARRGTTVYLCEKRIDMVPELLSSNLCSLRSNVDRLAFSCIWEMNHNAEILKTRFT 500 510 520 530 540 550 450 mKIAA1 KSVINSKVSV :::::::.:. gi|149 KSVINSKASLTYAEAQMRIDSAAMNDDITTSLRGLNKLAKILKRGRIEKGALTLSSPEIR 560 570 580 590 600 610 >>gi|187469071|gb|AAI66824.1| Dis3 protein [Rattus norve (957 aa) initn: 2577 init1: 2577 opt: 2585 Z-score: 3130.9 bits: 589.6 E(): 1.1e-165 Smith-Waterman score: 2585; 96.500% identity (98.750% similar) in 400 aa overlap (52-451:188-587) 30 40 50 60 70 80 mKIAA1 KKKWQVSCQKTTIHVSSRLNTVPRYLNLKIVTYFSGEEYVKSLTANPELIDRLAYLSDEM . :. :::::::::::::::::: ::::: gi|187 EHLKMSAENQLQVILITNDKKNKEKAAEEGIPAFTCEEYVKSLTANPELIDRLACLSDEM 160 170 180 190 200 210 90 100 110 120 130 140 mKIAA1 NEIESGKIIFSEHLPLSKLQQGIKSGSYLQGTFRASRENYLEATVWIHGDKEEEKEILIQ ::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::: gi|187 NEIESGKIIFSEHLPLSKLQQGIKSGSYLQGTFRASRENYLEATVWIHGDKEDEKEILIQ 220 230 240 250 260 270 150 160 170 180 190 200 mKIAA1 GIKHLNRAVHEDIVAVELLPRSQWVAPSSVVLDDEGQNEDDVEKDEERELLLKTAVSEKM :.::::::.:::::::::::.::::::::::: ::::::::::::::::::::::::::: gi|187 GLKHLNRAIHEDIVAVELLPKSQWVAPSSVVLHDEGQNEDDVEKDEERELLLKTAVSEKM 280 290 300 310 320 330 210 220 230 240 250 260 mKIAA1 LRPTGRVVGIIKRNWRPYCGMLSKSDIKESRRHLFTPADKRIPRIRIETRQASALEGRRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 LRPTGRVVGIIKRNWRPYCGMLSKSDIKESRRHLFTPADKRIPRIRIETRQASALEGRRI 340 350 360 370 380 390 270 280 290 300 310 320 mKIAA1 IVAIDGWPRNSRYPNGHFVKNLGDVGEKETETEVLLLEHDVPHQPFSQAVLSFLPRMPWS :::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::: gi|187 IVAIDGWPRNSRYPNGHFVKNLGDVGEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWS 400 410 420 430 440 450 330 340 350 360 370 380 mKIAA1 ITEEDMKNREDLRHLCVCSVDPPGCTDIDDALHCRELSNGNLEVGVHIADVSHFIRPGNA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 ITEEDMKNREDLRHLCVCSVDPPGCTDIDDALHCRELSNGNLEVGVHIADVSHFIRPGNA 460 470 480 490 500 510 390 400 410 420 430 440 mKIAA1 LDQESARRGTTVYLCEKRIDMVPELLSSNLCSLRSNVDRLAFSCIWEMNHNAEILKTRFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 LDQESARRGTTVYLCEKRIDMVPELLSSNLCSLRSNVDRLAFSCIWEMNHNAEILKTRFT 520 530 540 550 560 570 450 mKIAA1 KSVINSKVSV :::::::.:. gi|187 KSVINSKASLTYAEAQMRIDSAAMNDDITTSLRGLNKLAKILKRGRIEKGALTLSSPEIR 580 590 600 610 620 630 >>gi|168278787|dbj|BAG11273.1| exosome complex exonuclea (928 aa) initn: 2480 init1: 2480 opt: 2489 Z-score: 3014.6 bits: 568.1 E(): 3.3e-159 Smith-Waterman score: 2489; 86.480% identity (94.872% similar) in 429 aa overlap (23-451:131-558) 10 20 30 40 50 mKIAA1 SPLLVHLKTATVYLNIINKSFKKKWQVSCQKTTIHVSSRLNTVPRYLNLKIV :: ... : .: ... . . .. . . gi|168 TYVEQEQGENANDRNDRAIRVAAKWYNEHLKKMSADNQLQVIFITNDRRNKEKAIE-EGI 110 120 130 140 150 60 70 80 90 100 110 mKIAA1 TYFSGEEYVKSLTANPELIDRLAYLSDEMNEIESGKIIFSEHLPLSKLQQGIKSGSYLQG :. :::::::::::::::::: ::.: ::::::::::::::::::::::::::.:::: gi|168 PAFTCEEYVKSLTANPELIDRLACLSEEGNEIESGKIIFSEHLPLSKLQQGIKSGTYLQG 160 170 180 190 200 210 120 130 140 150 160 170 mKIAA1 TFRASRENYLEATVWIHGDKEEEKEILIQGIKHLNRAVHEDIVAVELLPRSQWVAPSSVV :::::::::::::::::::.::.:::..::.::::::::::::::::::.:::::::::: gi|168 TFRASRENYLEATVWIHGDNEENKEIILQGLKHLNRAVHEDIVAVELLPKSQWVAPSSVV 220 230 240 250 260 270 180 190 200 210 220 230 mKIAA1 LDDEGQNEDDVEKDEERELLLKTAVSEKMLRPTGRVVGIIKRNWRPYCGMLSKSDIKESR : ::::::.::::.:::: .::::::::::.::::::::::::::::::::::::::::: gi|168 LHDEGQNEEDVEKEEERERMLKTAVSEKMLKPTGRVVGIIKRNWRPYCGMLSKSDIKESR 280 290 300 310 320 330 240 250 260 270 280 290 mKIAA1 RHLFTPADKRIPRIRIETRQASALEGRRIIVAIDGWPRNSRYPNGHFVKNLGDVGEKETE ::::::::::::::::::::::.:::::::::::::::::::::::::.::::::::::: gi|168 RHLFTPADKRIPRIRIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDVGEKETE 340 350 360 370 380 390 300 310 320 330 340 350 mKIAA1 TEVLLLEHDVPHQPFSQAVLSFLPRMPWSITEEDMKNREDLRHLCVCSVDPPGCTDIDDA ::::::::::::::::::::::::.:::::::.::::::::::::.:::::::::::::: gi|168 TEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGCTDIDDA 400 410 420 430 440 450 360 370 380 390 400 410 mKIAA1 LHCRELSNGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPELLSSNLC :::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 LHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPELLSSNLC 460 470 480 490 500 510 420 430 440 450 mKIAA1 SLRSNVDRLAFSCIWEMNHNAEILKTRFTKSVINSKVSV ::. .:::::::::::::::::::::.:::::::::.:. gi|168 SLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRIDSANMNDDITTS 520 530 540 550 560 570 gi|168 LRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSETHDPIDLQTKELRETNSMVEEFMLL 580 590 600 610 620 630 >>gi|33440520|gb|AAH56143.1| DIS3 mitotic control homolo (958 aa) initn: 2480 init1: 2480 opt: 2489 Z-score: 3014.4 bits: 568.1 E(): 3.4e-159 Smith-Waterman score: 2489; 86.480% identity (94.872% similar) in 429 aa overlap (23-451:161-588) 10 20 30 40 50 mKIAA1 SPLLVHLKTATVYLNIINKSFKKKWQVSCQKTTIHVSSRLNTVPRYLNLKIV :: ... : .: ... . . .. . . gi|334 TYVEQEQGENANDRNDRAIRVAAKWYNEHLKKMSADNQLQVIFITNDRRNKEKAIE-EGI 140 150 160 170 180 60 70 80 90 100 110 mKIAA1 TYFSGEEYVKSLTANPELIDRLAYLSDEMNEIESGKIIFSEHLPLSKLQQGIKSGSYLQG :. :::::::::::::::::: ::.: ::::::::::::::::::::::::::.:::: gi|334 PAFTCEEYVKSLTANPELIDRLACLSEEGNEIESGKIIFSEHLPLSKLQQGIKSGTYLQG 190 200 210 220 230 240 120 130 140 150 160 170 mKIAA1 TFRASRENYLEATVWIHGDKEEEKEILIQGIKHLNRAVHEDIVAVELLPRSQWVAPSSVV :::::::::::::::::::.::.:::..::.::::::::::::::::::.:::::::::: gi|334 TFRASRENYLEATVWIHGDNEENKEIILQGLKHLNRAVHEDIVAVELLPKSQWVAPSSVV 250 260 270 280 290 300 180 190 200 210 220 230 mKIAA1 LDDEGQNEDDVEKDEERELLLKTAVSEKMLRPTGRVVGIIKRNWRPYCGMLSKSDIKESR : ::::::.::::.:::: .::::::::::.::::::::::::::::::::::::::::: gi|334 LHDEGQNEEDVEKEEERERMLKTAVSEKMLKPTGRVVGIIKRNWRPYCGMLSKSDIKESR 310 320 330 340 350 360 240 250 260 270 280 290 mKIAA1 RHLFTPADKRIPRIRIETRQASALEGRRIIVAIDGWPRNSRYPNGHFVKNLGDVGEKETE ::::::::::::::::::::::.:::::::::::::::::::::::::.::::::::::: gi|334 RHLFTPADKRIPRIRIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDVGEKETE 370 380 390 400 410 420 300 310 320 330 340 350 mKIAA1 TEVLLLEHDVPHQPFSQAVLSFLPRMPWSITEEDMKNREDLRHLCVCSVDPPGCTDIDDA ::::::::::::::::::::::::.:::::::.::::::::::::.:::::::::::::: gi|334 TEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGCTDIDDA 430 440 450 460 470 480 360 370 380 390 400 410 mKIAA1 LHCRELSNGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPELLSSNLC :::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|334 LHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPELLSSNLC 490 500 510 520 530 540 420 430 440 450 mKIAA1 SLRSNVDRLAFSCIWEMNHNAEILKTRFTKSVINSKVSV ::. .:::::::::::::::::::::.:::::::::.:. gi|334 SLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRIDSANMNDDITTS 550 560 570 580 590 600 gi|334 LRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSETHDPIDLQTKELRETNSMVEEFMLL 610 620 630 640 650 660 >>gi|159149063|dbj|BAF92610.1| DIS3 [Homo sapiens] (958 aa) initn: 2478 init1: 2478 opt: 2487 Z-score: 3012.0 bits: 567.6 E(): 4.6e-159 Smith-Waterman score: 2487; 86.480% identity (94.872% similar) in 429 aa overlap (23-451:161-588) 10 20 30 40 50 mKIAA1 SPLLVHLKTATVYLNIINKSFKKKWQVSCQKTTIHVSSRLNTVPRYLNLKIV :: ... : .: ... . . .. . . gi|159 TYVEQEQGENANDRNDRAIRVAAKWYNEHLKKMSADNQLQVIFITNDRRNKEKAIE-EGI 140 150 160 170 180 60 70 80 90 100 110 mKIAA1 TYFSGEEYVKSLTANPELIDRLAYLSDEMNEIESGKIIFSEHLPLSKLQQGIKSGSYLQG :. :::::::::::::::::: ::.: ::::::::::::::::::::::::::.:::: gi|159 PAFTCEEYVKSLTANPELIDRLACLSEEGNEIESGKIIFSEHLPLSKLQQGIKSGTYLQG 190 200 210 220 230 240 120 130 140 150 160 170 mKIAA1 TFRASRENYLEATVWIHGDKEEEKEILIQGIKHLNRAVHEDIVAVELLPRSQWVAPSSVV :::::::::::::::::::.::.:::..::.::::::::::::::::::.:::::::::: gi|159 TFRASRENYLEATVWIHGDNEENKEIILQGLKHLNRAVHEDIVAVELLPKSQWVAPSSVV 250 260 270 280 290 300 180 190 200 210 220 230 mKIAA1 LDDEGQNEDDVEKDEERELLLKTAVSEKMLRPTGRVVGIIKRNWRPYCGMLSKSDIKESR : ::::::.::::.:::: .::::::::::.::::::::::::::::::::::::::::: gi|159 LHDEGQNEEDVEKEEERERMLKTAVSEKMLKPTGRVVGIIKRNWRPYCGMLSKSDIKESR 310 320 330 340 350 360 240 250 260 270 280 290 mKIAA1 RHLFTPADKRIPRIRIETRQASALEGRRIIVAIDGWPRNSRYPNGHFVKNLGDVGEKETE ::::::::::::::::::::::.:::::::::::::::::::::::::.::::::::::: gi|159 RHLFTPADKRIPRIRIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDVGEKETE 370 380 390 400 410 420 300 310 320 330 340 350 mKIAA1 TEVLLLEHDVPHQPFSQAVLSFLPRMPWSITEEDMKNREDLRHLCVCSVDPPGCTDIDDA ::::::::::::::::::::::::.:::::::.::::::::::::.:::::::::::::: gi|159 TEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGCTDIDDA 430 440 450 460 470 480 360 370 380 390 400 410 mKIAA1 LHCRELSNGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPELLSSNLC :::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|159 LHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPELLSSNLC 490 500 510 520 530 540 420 430 440 450 mKIAA1 SLRSNVDRLAFSCIWEMNHNAEILKTRFTKSVINSKVSV ::. .:::::::::::::::::::::.:::::::::.:. gi|159 SLQCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRIDSANMNDDITTS 550 560 570 580 590 600 gi|159 LRGLNKLAKILKKRRIEKGALTLSSPEVRFHMDSETHDPIDLQTKELRETNSMVEEFMLL 610 620 630 640 650 660 >>gi|52545700|emb|CAH56266.1| hypothetical protein [Homo (958 aa) initn: 2497 init1: 2472 opt: 2481 Z-score: 3004.7 bits: 566.3 E(): 1.2e-158 Smith-Waterman score: 2481; 86.247% identity (94.639% similar) in 429 aa overlap (23-451:161-588) 10 20 30 40 50 mKIAA1 SPLLVHLKTATVYLNIINKSFKKKWQVSCQKTTIHVSSRLNTVPRYLNLKIV :: ... : .: ... . . .. . . gi|525 TYVEQEQGENANDRNDRAIRVAAKWYNEHLKKMSADNQLQVIFITNDRRNKEKAIE-EGI 140 150 160 170 180 60 70 80 90 100 110 mKIAA1 TYFSGEEYVKSLTANPELIDRLAYLSDEMNEIESGKIIFSEHLPLSKLQQGIKSGSYLQG :. :::::::::::::::::: ::.: ::::::::::::::::::::::::::.:::: gi|525 PAFTCEEYVKSLTANPELIDRLACLSEEGNEIESGKIIFSEHLPLSKLQQGIKSGTYLQG 190 200 210 220 230 240 120 130 140 150 160 170 mKIAA1 TFRASRENYLEATVWIHGDKEEEKEILIQGIKHLNRAVHEDIVAVELLPRSQWVAPSSVV :::::::::::::::::::.::.:::..::.::::::::::::::::::.:::::::::: gi|525 TFRASRENYLEATVWIHGDSEENKEIILQGLKHLNRAVHEDIVAVELLPKSQWVAPSSVV 250 260 270 280 290 300 180 190 200 210 220 230 mKIAA1 LDDEGQNEDDVEKDEERELLLKTAVSEKMLRPTGRVVGIIKRNWRPYCGMLSKSDIKESR : ::::::.::::.:: : .::::::::::.::::::::::::::::::::::::::::: gi|525 LHDEGQNEEDVEKEEETERMLKTAVSEKMLKPTGRVVGIIKRNWRPYCGMLSKSDIKESR 310 320 330 340 350 360 240 250 260 270 280 290 mKIAA1 RHLFTPADKRIPRIRIETRQASALEGRRIIVAIDGWPRNSRYPNGHFVKNLGDVGEKETE ::::::::::::::::::::::.:::::::::::::::::::::::::.::::::::::: gi|525 RHLFTPADKRIPRIRIETRQASTLEGRRIIVAIDGWPRNSRYPNGHFVRNLGDVGEKETE 370 380 390 400 410 420 300 310 320 330 340 350 mKIAA1 TEVLLLEHDVPHQPFSQAVLSFLPRMPWSITEEDMKNREDLRHLCVCSVDPPGCTDIDDA ::::::::::::::::::::::::.:::::::.::::::::::::.:::::::::::::: gi|525 TEVLLLEHDVPHQPFSQAVLSFLPKMPWSITEKDMKNREDLRHLCICSVDPPGCTDIDDA 430 440 450 460 470 480 360 370 380 390 400 410 mKIAA1 LHCRELSNGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPELLSSNLC :::::: ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|525 LHCRELENGNLEVGVHIADVSHFIRPGNALDQESARRGTTVYLCEKRIDMVPELLSSNLC 490 500 510 520 530 540 420 430 440 450 mKIAA1 SLRSNVDRLAFSCIWEMNHNAEILKTRFTKSVINSKVSV ::. .:::::::::::::::::::::.:::::::::.:. gi|525 SLKCDVDRLAFSCIWEMNHNAEILKTKFTKSVINSKASLTYAEAQLRIDSANMNDDITTS 550 560 570 580 590 600 gi|525 LRGLNKLAKILKKRRIEKGALTLSSSEVRFHMDSETHDPIDLQTKELRETNSMVEEFMLL 610 620 630 640 650 660 >>gi|71296758|gb|AAH38101.1| DIS3 protein [Homo sapiens] (796 aa) initn: 2485 init1: 2460 opt: 2468 Z-score: 2990.0 bits: 563.3 E(): 7.7e-158 Smith-Waterman score: 2468; 91.250% identity (97.250% similar) in 400 aa overlap (52-451:27-426) 30 40 50 60 70 80 mKIAA1 KKKWQVSCQKTTIHVSSRLNTVPRYLNLKIVTYFSGEEYVKSLTANPELIDRLAYLSDEM . :. :::::::::::::::::: ::.: gi|712 MSADNQLQVIFITNDRRNKEKAIEEGIPAFTCEEYVKSLTANPELIDRLACLSEEG 10 20 30 40 50 90 100 110 120 130 140 mKIAA1 NEIESGKIIFSEHLPLSKLQQGIKSGSYLQGTFRASRENYLEATVWIHGDKEEEKEILIQ ::::::::::::::::::::::::::.:::::::::::::::::::::::.::.:::..: gi|712 NEIESGKIIFSEHLPLSKLQQGIKSGTYLQGTFRASRENYLEATVWIHGDSEENKEIILQ 60 70 80 90 100 110 150 160 170 180 190 200 mKIAA1 GIKHLNRAVHEDIVAVELLPRSQWVAPSSVVLDDEGQNEDDVEKDEERELLLKTAVSEKM :.::::::::::::::::::.::::::::::: ::::::.::::.:: : .::::::::: gi|712 GLKHLNRAVHEDIVAVELLPKSQWVAPSSVVLHDEGQNEEDVEKEEETERMLKTAVSEKM 120 130 140 150 160 170 210 220 230 240 250 260 mKIAA1 LRPTGRVVGIIKRNWRPYCGMLSKSDIKESRRHLFTPADKRIPRIRIETRQASALEGRRI :.:::::: ::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|712 LKPTGRVVVIIKRNWRPYCGMLSKSDIKESRRHLFTPADKRIPRIRIETRQASTLEGRRI 180 190 200 210 220 230 270 280 290 300 310 320 mKIAA1 IVAIDGWPRNSRYPNGHFVKNLGDVGEKETETEVLLLEHDVPHQPFSQAVLSFLPRMPWS :::::::::::::::::::.:::::::::::::::::::::::::::::::::::.:::: gi|712 IVAIDGWPRNSRYPNGHFVRNLGDVGEKETETEVLLLEHDVPHQPFSQAVLSFLPKMPWS 240 250 260 270 280 290 330 340 350 360 370 380 mKIAA1 ITEEDMKNREDLRHLCVCSVDPPGCTDIDDALHCRELSNGNLEVGVHIADVSHFIRPGNA :::.::::::::::::.:::::::::::::::::::: :::::::::::::::::::::: gi|712 ITEKDMKNREDLRHLCICSVDPPGCTDIDDALHCRELENGNLEVGVHIADVSHFIRPGNA 300 310 320 330 340 350 390 400 410 420 430 440 mKIAA1 LDQESARRGTTVYLCEKRIDMVPELLSSNLCSLRSNVDRLAFSCIWEMNHNAEILKTRFT :::::::::::::::::::::::::::::::::. .:::::::::::::::::::::.:: gi|712 LDQESARRGTTVYLCEKRIDMVPELLSSNLCSLKCDVDRLAFSCIWEMNHNAEILKTKFT 360 370 380 390 400 410 450 mKIAA1 KSVINSKVSV :::::::.:. gi|712 KSVINSKASLTYAEAQLRIDSANMNDDITTSLRGLNKLAKILKKRRIEKGALTLSSPEVR 420 430 440 450 460 470 451 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Tue Mar 17 12:49:46 2009 done: Tue Mar 17 12:56:38 2009 Total Scan time: 927.330 Total Display time: 0.150 Function used was FASTA [version 34.26.5 April 26, 2007]