# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mpm07344.fasta.nr -Q ../query/mKIAA1041.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1041, 595 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7894560 sequences Expectation_n fit: rho(ln(x))= 6.5292+/-0.000205; mu= 6.3327+/- 0.011 mean_var=141.6652+/-26.737, 0's: 35 Z-trim: 109 B-trim: 8 in 2/64 Lambda= 0.107756 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|122889954|emb|CAM14652.1| forkhead box J3 [Mus ( 589) 4123 652.8 8.8e-185 gi|109003250|ref|XP_001085670.1| PREDICTED: simila ( 588) 3854 610.9 3.4e-172 gi|47605695|sp|Q8BUR3.1|FOXJ3_MOUSE RecName: Full= ( 623) 2934 467.9 4e-129 gi|148698488|gb|EDL30435.1| forkhead box J3 [Mus m ( 623) 2929 467.2 6.9e-129 gi|149035427|gb|EDL90108.1| forkhead box J3 (predi ( 622) 2811 448.8 2.3e-123 gi|194207614|ref|XP_001503206.2| PREDICTED: simila ( 608) 2703 432.0 2.6e-118 gi|73976695|ref|XP_855802.1| PREDICTED: similar to ( 433) 2682 428.6 1.9e-117 gi|73976697|ref|XP_532540.2| PREDICTED: similar to ( 622) 2682 428.8 2.5e-117 gi|8134814|sp|Q9UPW0.1|FOXJ3_HUMAN RecName: Full=F ( 622) 2678 428.1 3.8e-117 gi|109003247|ref|XP_001085783.1| PREDICTED: simila ( 622) 2670 426.9 9.1e-117 gi|114555883|ref|XP_001172886.1| PREDICTED: forkhe ( 607) 2667 426.4 1.2e-116 gi|156230782|gb|AAI51829.1| Forkhead box J3 [Homo ( 622) 2667 426.4 1.3e-116 gi|119627567|gb|EAX07162.1| forkhead box J3, isofo ( 622) 2667 426.4 1.3e-116 gi|126330495|ref|XP_001381612.1| PREDICTED: simila ( 607) 2600 416.0 1.7e-113 gi|33874209|gb|AAH14182.1| FOXJ3 protein [Homo sap ( 382) 2439 390.8 4.2e-106 gi|119627571|gb|EAX07166.1| forkhead box J3, isofo ( 382) 2439 390.8 4.2e-106 gi|149712488|ref|XP_001498777.1| PREDICTED: simila ( 572) 1293 212.8 2.4e-52 gi|114643279|ref|XP_001166729.1| PREDICTED: forkhe ( 573) 1290 212.3 3.3e-52 gi|73997228|ref|XP_853187.1| PREDICTED: similar to ( 572) 1286 211.7 5e-52 gi|13626933|sp|Q9P0K8.1|FOXJ2_HUMAN RecName: Full= ( 574) 1279 210.6 1.1e-51 gi|189525242|ref|XP_001922273.1| PREDICTED: simila ( 592) 1229 202.9 2.4e-49 gi|55637805|ref|XP_522341.1| PREDICTED: similar to ( 525) 1226 202.3 3e-49 gi|47229824|emb|CAG07020.1| unnamed protein produc ( 609) 1226 202.4 3.4e-49 gi|73997232|ref|XP_543830.2| PREDICTED: similar to ( 523) 1218 201.1 7.2e-49 gi|13924465|gb|AAK49016.1|AF155133_1 FOXJ2 forkhea ( 526) 1216 200.8 9e-49 gi|74227353|dbj|BAE21762.1| unnamed protein produc ( 186) 1205 198.6 1.4e-48 gi|13626888|sp|Q9ES18.1|FOXJ2_MOUSE RecName: Full= ( 565) 1206 199.3 2.8e-48 gi|119627572|gb|EAX07167.1| forkhead box J3, isofo ( 188) 1194 196.9 4.7e-48 gi|88954261|gb|AAI14078.1| Forkhead box J3 [Bos ta ( 184) 1187 195.8 9.7e-48 gi|52545645|emb|CAB75651.2| hypothetical protein [ ( 173) 1146 189.4 7.7e-46 gi|157422824|gb|AAI53348.1| Foxj3 protein [Xenopus ( 603) 1124 186.5 2e-44 gi|149049525|gb|EDM01979.1| similar to fork head t ( 583) 1012 169.1 3.4e-39 gi|74143021|dbj|BAE42529.1| unnamed protein produc ( 155) 1000 166.7 4.9e-39 gi|126339947|ref|XP_001364301.1| PREDICTED: simila ( 561) 981 164.3 9.3e-38 gi|118083270|ref|XP_416484.2| PREDICTED: similar t ( 541) 948 159.1 3.2e-36 gi|194667445|ref|XP_612715.3| PREDICTED: similar t ( 560) 943 158.4 5.6e-36 gi|224043778|ref|XP_002190850.1| PREDICTED: simila ( 482) 939 157.7 7.7e-36 gi|82181765|sp|Q68EZ2.1|FOXJ2_XENLA RecName: Full= ( 512) 874 147.6 8.9e-33 gi|118574793|sp|Q28EM1.1|FOXJ2_XENTR RecName: Full ( 512) 858 145.1 5e-32 gi|109095525|ref|XP_001118419.1| PREDICTED: simila ( 520) 824 139.8 2e-30 gi|47211273|emb|CAF96645.1| unnamed protein produc ( 342) 794 135.0 3.7e-29 gi|149572739|ref|XP_001518586.1| PREDICTED: simila ( 147) 772 131.2 2.2e-28 gi|149555709|ref|XP_001516987.1| PREDICTED: simila ( 535) 772 131.8 5.4e-28 gi|115528269|gb|AAI24873.1| LOC100158348 protein [ ( 489) 766 130.8 9.8e-28 gi|49257792|gb|AAH74713.1| Forkhead box J2 [Xenopu ( 489) 757 129.4 2.6e-27 gi|70569616|dbj|BAE06444.1| transcription factor p ( 560) 717 123.2 2.1e-25 gi|74185584|dbj|BAE32686.1| unnamed protein produc ( 150) 688 118.2 1.9e-24 gi|47229825|emb|CAG07021.1| unnamed protein produc ( 125) 650 112.2 1e-22 gi|82706182|gb|ABB89475.1| forkhead transcription ( 483) 628 109.3 2.8e-21 gi|190583907|gb|EDV23977.1| hypothetical protein T ( 174) 565 99.1 1.2e-18 >>gi|122889954|emb|CAM14652.1| forkhead box J3 [Mus musc (589 aa) initn: 4123 init1: 4123 opt: 4123 Z-score: 3473.7 bits: 652.8 E(): 8.8e-185 Smith-Waterman score: 4123; 100.000% identity (100.000% similar) in 589 aa overlap (7-595:1-589) 10 20 30 40 50 60 mKIAA1 DSLCGQMGLYGQACPSVTSLRMTSELESSLTSMDWLPQLTMRAAIQKSDATQNAHGTGIS :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 MGLYGQACPSVTSLRMTSELESSLTSMDWLPQLTMRAAIQKSDATQNAHGTGIS 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 KKNALLDPNTTLDQEEVQQHKDGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 KKNALLDPNTTLDQEEVQQHKDGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPY 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 YREAGSGWKNSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDTLPTRPKKRARSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 YREAGSGWKNSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDTLPTRPKKRARSV 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 ERVTLYNADQDGSDSPRSSLNNSLSDQSLASVNLNSVGSVHSYTPVTNHPEPVSQPLTPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 ERVTLYNADQDGSDSPRSSLNNSLSDQSLASVNLNSVGSVHSYTPVTNHPEPVSQPLTPQ 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 QQQQPQYNLPEREKQLLFTEYNFEDLSASFRSLYKSVFEQSLSQQGLMSIPSESSQQSHT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 QQQQPQYNLPEREKQLLFTEYNFEDLSASFRSLYKSVFEQSLSQQGLMSIPSESSQQSHT 240 250 260 270 280 290 310 320 330 340 350 360 mKIAA1 SCSYQHSPSSTVTSHPHSNQSSLPNNHSGLSATGSNSVAQVSLSHPQMHPQPSPHTPHRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 SCSYQHSPSSTVTSHPHSNQSSLPNNHSGLSATGSNSVAQVSLSHPQMHPQPSPHTPHRP 300 310 320 330 340 350 370 380 390 400 410 420 mKIAA1 HGLPQHPQRPQHPAPHPQQHSQLQPPHSQHPPPHQHIQHHPNHQHQTLAHQPPPPPQQVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 HGLPQHPQRPQHPAPHPQQHSQLQPPHSQHPPPHQHIQHHPNHQHQTLAHQPPPPPQQVS 360 370 380 390 400 410 430 440 450 460 470 480 mKIAA1 CNSGVSSDWYATLDMLKESCRIASSVNWSDVDLSQFQGLMESMRQADLKNWSLDQVQFAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 CNSGVSSDWYATLDMLKESCRIASSVNWSDVDLSQFQGLMESMRQADLKNWSLDQVQFAD 420 430 440 450 460 470 490 500 510 520 530 540 mKIAA1 LCSSLNQFFTQTGLIHSQSNVPQNVCHGAMHPAKPSQHIGAGNLYIDSRQSLPPSVMPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 LCSSLNQFFTQTGLIHSQSNVPQNVCHGAMHPAKPSQHIGAGNLYIDSRQSLPPSVMPPP 480 490 500 510 520 530 550 560 570 580 590 mKIAA1 GYPHIPQALNTPGTTMAGHHGAMNQQHMMPSQAFPMRRPLPPDDIQDDFDWDSIV ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 GYPHIPQALNTPGTTMAGHHGAMNQQHMMPSQAFPMRRPLPPDDIQDDFDWDSIV 540 550 560 570 580 >>gi|109003250|ref|XP_001085670.1| PREDICTED: similar to (588 aa) initn: 3356 init1: 1819 opt: 3854 Z-score: 3247.7 bits: 610.9 E(): 3.4e-172 Smith-Waterman score: 3854; 94.068% identity (96.949% similar) in 590 aa overlap (7-595:1-588) 10 20 30 40 50 60 mKIAA1 DSLCGQMGLYGQACPSVTSLRMTSELESSLTSMDWLPQLTMRAAIQKSDATQNAHGTGIS :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 MGLYGQACPSVTSLRMTSELESSLTSMDWLPQLTMRAAIQKSDATQNAHGTGIS 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 KKNALLDPNTTLDQEEVQQHKDGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 KKNALLDPNTTLDQEEVQQHKDGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPY 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 YREAGSGWKNSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDTLPTRPKKRARSV :::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::: gi|109 YREAGSGWKNSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALPTRPKKRARSV 120 130 140 150 160 170 190 200 210 220 230 240 mKIAA1 ERVTLYNADQDGSDSPRSSLNNSLSDQSLASVNLNSVGSVHSYTPVTNHPEPVSQPLTPQ :::::::.:::::::::::::::::::::::::::::::::::::::.::: ::: :::: gi|109 ERVTLYNTDQDGSDSPRSSLNNSLSDQSLASVNLNSVGSVHSYTPVTSHPESVSQSLTPQ 180 190 200 210 220 230 250 260 270 280 290 300 mKIAA1 QQQQPQYNLPEREKQLLFTEYNFEDLSASFRSLYKSVFEQSLSQQGLMSIPSESSQQSHT :: ::::::::.:::::.:::::::::::::::::::::::::::::.::::::::::: gi|109 QQ--PQYNLPERDKQLLFSEYNFEDLSASFRSLYKSVFEQSLSQQGLMNIPSESSQQSHT 240 250 260 270 280 290 310 320 330 340 350 mKIAA1 SCSYQHSPSSTVTSHPHSNQSSLPNNH-SGLSATGSNSVAQVSLSHPQMHPQPSPHTPHR ::::::::::::..::::::::: :.: :::..::::::::::::::::: ::::: ::: gi|109 SCSYQHSPSSTVSTHPHSNQSSLSNSHGSGLNTTGSNSVAQVSLSHPQMHTQPSPHPPHR 300 310 320 330 340 350 360 370 380 390 400 410 mKIAA1 PHGLPQHPQRPQHPAPHPQQHSQLQPPHSQHPPPHQHIQHHPNHQHQTLAHQPPPPPQQV :::::::::: ::::::::::::: :: ::: ::::::::::::::::.:: ::::::: gi|109 PHGLPQHPQRSPHPAPHPQQHSQLQSPHPQHPSPHQHIQHHPNHQHQTLTHQAPPPPQQV 360 370 380 390 400 410 420 430 440 450 460 470 mKIAA1 SCNSGVSSDWYATLDMLKESCRIASSVNWSDVDLSQFQGLMESMRQADLKNWSLDQVQFA :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SCNSGVSNDWYATLDMLKESCRIASSVNWSDVDLSQFQGLMESMRQADLKNWSLDQVQFA 420 430 440 450 460 470 480 490 500 510 520 530 mKIAA1 DLCSSLNQFFTQTGLIHSQSNVPQNVCHGAMHPAKPSQHIGAGNLYIDSRQSLPPSVMPP :::::::::::::::::::::: ::::::::::.:::::::.:::::::::.:::::::: gi|109 DLCSSLNQFFTQTGLIHSQSNVQQNVCHGAMHPTKPSQHIGTGNLYIDSRQNLPPSVMPP 480 490 500 510 520 530 540 550 560 570 580 590 mKIAA1 PGYPHIPQALNTPGTTMAGHHGAMNQQHMMPSQAFPMRRPLPPDDIQDDFDWDSIV ::::::::::.:::::::::: ::::::::::::: ::: :::::::::::::::: gi|109 PGYPHIPQALSTPGTTMAGHHRAMNQQHMMPSQAFQMRRSLPPDDIQDDFDWDSIV 540 550 560 570 580 >>gi|47605695|sp|Q8BUR3.1|FOXJ3_MOUSE RecName: Full=Fork (623 aa) initn: 2934 init1: 2934 opt: 2934 Z-score: 2474.4 bits: 467.9 E(): 4e-129 Smith-Waterman score: 4045; 94.543% identity (94.543% similar) in 623 aa overlap (7-595:1-623) 10 20 30 40 50 60 mKIAA1 DSLCGQMGLYGQACPSVTSLRMTSELESSLTSMDWLPQLTMRAAIQKSDATQNAHGTGIS :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 MGLYGQACPSVTSLRMTSELESSLTSMDWLPQLTMRAAIQKSDATQNAHGTGIS 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 KKNALLDPNTTLDQEEVQQHKDGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 KKNALLDPNTTLDQEEVQQHKDGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPY 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 YREAGSGWKNSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDTLPTRPKKRARSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 YREAGSGWKNSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDTLPTRPKKRARSV 120 130 140 150 160 170 190 200 mKIAA1 ER----------------------------------VTLYNADQDGSDSPRSSLNNSLSD :: :::::::::::::::::::::::: gi|476 ERASTPYSIDSDSLGMECIISGSASPTLAINTVTNKVTLYNADQDGSDSPRSSLNNSLSD 180 190 200 210 220 230 210 220 230 240 250 260 mKIAA1 QSLASVNLNSVGSVHSYTPVTNHPEPVSQPLTPQQQQQPQYNLPEREKQLLFTEYNFEDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 QSLASVNLNSVGSVHSYTPVTNHPEPVSQPLTPQQQQQPQYNLPEREKQLLFTEYNFEDL 240 250 260 270 280 290 270 280 290 300 310 320 mKIAA1 SASFRSLYKSVFEQSLSQQGLMSIPSESSQQSHTSCSYQHSPSSTVTSHPHSNQSSLPNN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 SASFRSLYKSVFEQSLSQQGLMSIPSESSQQSHTSCSYQHSPSSTVTSHPHSNQSSLPNN 300 310 320 330 340 350 330 340 350 360 370 380 mKIAA1 HSGLSATGSNSVAQVSLSHPQMHPQPSPHTPHRPHGLPQHPQRPQHPAPHPQQHSQLQPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 HSGLSATGSNSVAQVSLSHPQMHPQPSPHTPHRPHGLPQHPQRPQHPAPHPQQHSQLQPP 360 370 380 390 400 410 390 400 410 420 430 440 mKIAA1 HSQHPPPHQHIQHHPNHQHQTLAHQPPPPPQQVSCNSGVSSDWYATLDMLKESCRIASSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 HSQHPPPHQHIQHHPNHQHQTLAHQPPPPPQQVSCNSGVSSDWYATLDMLKESCRIASSV 420 430 440 450 460 470 450 460 470 480 490 500 mKIAA1 NWSDVDLSQFQGLMESMRQADLKNWSLDQVQFADLCSSLNQFFTQTGLIHSQSNVPQNVC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 NWSDVDLSQFQGLMESMRQADLKNWSLDQVQFADLCSSLNQFFTQTGLIHSQSNVPQNVC 480 490 500 510 520 530 510 520 530 540 550 560 mKIAA1 HGAMHPAKPSQHIGAGNLYIDSRQSLPPSVMPPPGYPHIPQALNTPGTTMAGHHGAMNQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 HGAMHPAKPSQHIGAGNLYIDSRQSLPPSVMPPPGYPHIPQALNTPGTTMAGHHGAMNQQ 540 550 560 570 580 590 570 580 590 mKIAA1 HMMPSQAFPMRRPLPPDDIQDDFDWDSIV ::::::::::::::::::::::::::::: gi|476 HMMPSQAFPMRRPLPPDDIQDDFDWDSIV 600 610 620 >>gi|148698488|gb|EDL30435.1| forkhead box J3 [Mus muscu (623 aa) initn: 2929 init1: 2929 opt: 2929 Z-score: 2470.2 bits: 467.2 E(): 6.9e-129 Smith-Waterman score: 4040; 94.382% identity (94.543% similar) in 623 aa overlap (7-595:1-623) 10 20 30 40 50 60 mKIAA1 DSLCGQMGLYGQACPSVTSLRMTSELESSLTSMDWLPQLTMRAAIQKSDATQNAHGTGIS :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 MGLYGQACPSVTSLRMTSELESSLTSMDWLPQLTMRAAIQKSDATQNAHGTGIS 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 KKNALLDPNTTLDQEEVQQHKDGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 KKNALLDPNTTLDQEEVQQHKDGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPY 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 YREAGSGWKNSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDTLPTRPKKRARSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 YREAGSGWKNSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDTLPTRPKKRARSV 120 130 140 150 160 170 190 200 mKIAA1 ER----------------------------------VTLYNADQDGSDSPRSSLNNSLSD :: :::::.:::::::::::::::::: gi|148 ERASTPYSIDSDSLGMECIISGSASPTLAINTVTNKVTLYNTDQDGSDSPRSSLNNSLSD 180 190 200 210 220 230 210 220 230 240 250 260 mKIAA1 QSLASVNLNSVGSVHSYTPVTNHPEPVSQPLTPQQQQQPQYNLPEREKQLLFTEYNFEDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 QSLASVNLNSVGSVHSYTPVTNHPEPVSQPLTPQQQQQPQYNLPEREKQLLFTEYNFEDL 240 250 260 270 280 290 270 280 290 300 310 320 mKIAA1 SASFRSLYKSVFEQSLSQQGLMSIPSESSQQSHTSCSYQHSPSSTVTSHPHSNQSSLPNN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SASFRSLYKSVFEQSLSQQGLMSIPSESSQQSHTSCSYQHSPSSTVTSHPHSNQSSLPNN 300 310 320 330 340 350 330 340 350 360 370 380 mKIAA1 HSGLSATGSNSVAQVSLSHPQMHPQPSPHTPHRPHGLPQHPQRPQHPAPHPQQHSQLQPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 HSGLSATGSNSVAQVSLSHPQMHPQPSPHTPHRPHGLPQHPQRPQHPAPHPQQHSQLQPP 360 370 380 390 400 410 390 400 410 420 430 440 mKIAA1 HSQHPPPHQHIQHHPNHQHQTLAHQPPPPPQQVSCNSGVSSDWYATLDMLKESCRIASSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 HSQHPPPHQHIQHHPNHQHQTLAHQPPPPPQQVSCNSGVSSDWYATLDMLKESCRIASSV 420 430 440 450 460 470 450 460 470 480 490 500 mKIAA1 NWSDVDLSQFQGLMESMRQADLKNWSLDQVQFADLCSSLNQFFTQTGLIHSQSNVPQNVC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 NWSDVDLSQFQGLMESMRQADLKNWSLDQVQFADLCSSLNQFFTQTGLIHSQSNVPQNVC 480 490 500 510 520 530 510 520 530 540 550 560 mKIAA1 HGAMHPAKPSQHIGAGNLYIDSRQSLPPSVMPPPGYPHIPQALNTPGTTMAGHHGAMNQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 HGAMHPAKPSQHIGAGNLYIDSRQSLPPSVMPPPGYPHIPQALNTPGTTMAGHHGAMNQQ 540 550 560 570 580 590 570 580 590 mKIAA1 HMMPSQAFPMRRPLPPDDIQDDFDWDSIV ::::::::::::::::::::::::::::: gi|148 HMMPSQAFPMRRPLPPDDIQDDFDWDSIV 600 610 620 >>gi|149035427|gb|EDL90108.1| forkhead box J3 (predicted (622 aa) initn: 3219 init1: 2039 opt: 2811 Z-score: 2371.1 bits: 448.8 E(): 2.3e-123 Smith-Waterman score: 3922; 92.468% identity (93.109% similar) in 624 aa overlap (7-595:1-622) 10 20 30 40 50 60 mKIAA1 DSLCGQMGLYGQACPSVTSLRMTSELESSLTSMDWLPQLTMRAAIQKSDATQNAHGTGIS :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 MGLYGQACPSVTSLRMTSELESSLTSMDWLPQLTMRAAIQKSDATQNAHGTGIS 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 KKNALLDPNTTLDQEEVQQHKDGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 KKNALLDPNTTLDQEEVQQHKDGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPY 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 YREAGSGWKNSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDTLPTRPKKRARSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 YREAGSGWKNSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDTLPTRPKKRARSV 120 130 140 150 160 170 190 200 mKIAA1 ER----------------------------------VTLYNADQDGSDSPRSSLNNSLSD :: :::::.:::::::::::::::::: gi|149 ERASTPYSIDSDSLGMECIISGSASPTLAINTVTNKVTLYNTDQDGSDSPRSSLNNSLSD 180 190 200 210 220 230 210 220 230 240 250 260 mKIAA1 QSLASVNLNSVGSVHSYTPVTNHPEPVSQPLTPQQQQQPQYNLPEREKQLLFTEYNFEDL ::::::::::::::::::::::::::::: :::::: ::::::::.::::::::::::: gi|149 QSLASVNLNSVGSVHSYTPVTNHPEPVSQSLTPQQQ--PQYNLPERDKQLLFTEYNFEDL 240 250 260 270 280 290 270 280 290 300 310 320 mKIAA1 SASFRSLYKSVFEQSLSQQGLMSIPSESSQQSHTSCSYQHSPSSTVTSHPHSNQSSLPNN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SASFRSLYKSVFEQSLSQQGLMSIPSESSQQSHTSCSYQHSPSSTVTSHPHSNQSSLPNN 300 310 320 330 340 350 330 340 350 360 370 380 mKIAA1 HSGLSATGSNSVAQVSLSHPQMHPQPSPHTPHRPHGLPQHPQRPQHPAPHPQQHSQLQPP ::::::::::::::::::::::: :::::::::::::::::::::::: ::::::::::: gi|149 HSGLSATGSNSVAQVSLSHPQMHTQPSPHTPHRPHGLPQHPQRPQHPASHPQQHSQLQPP 360 370 380 390 400 410 390 400 410 420 430 440 mKIAA1 HSQHPPPHQHIQHHPNHQHQTLAHQPPPPPQQVSCNSGVSSDWYATLDMLKESCRIASSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 HSQHPPPHQHIQHHPNHQHQTLAHQPPPPPQQVSCNSGVSSDWYATLDMLKESCRIASSV 420 430 440 450 460 470 450 460 470 480 490 500 mKIAA1 NWSDVDLSQFQGLMESMRQADLKNWSLDQVQFADLCSSLNQFFTQTGLIHSQSNVPQNVC ::::::::::::::::::::::::::::::::::::::::::::::::::::::. :::: gi|149 NWSDVDLSQFQGLMESMRQADLKNWSLDQVQFADLCSSLNQFFTQTGLIHSQSNAQQNVC 480 490 500 510 520 530 510 520 530 540 550 560 mKIAA1 HGAMHPAKPSQHIGAGNLYIDSRQS-LPPSVMPPPGYPHIPQALNTPGTTMAGHHGAMNQ ::::::::::::::::::::::::: .::::::::::::::::::::::::::::::::: gi|149 HGAMHPAKPSQHIGAGNLYIDSRQSGIPPSVMPPPGYPHIPQALNTPGTTMAGHHGAMNQ 540 550 560 570 580 590 570 580 590 mKIAA1 QHMMPSQAFPMRRPLPPDDIQDDFDWDSIV ::::::::: ::: :::::::::::::::: gi|149 QHMMPSQAFQMRRSLPPDDIQDDFDWDSIV 600 610 620 >>gi|194207614|ref|XP_001503206.2| PREDICTED: similar to (608 aa) initn: 2136 init1: 2136 opt: 2703 Z-score: 2280.5 bits: 432.0 E(): 2.6e-118 Smith-Waterman score: 3706; 89.344% identity (91.967% similar) in 610 aa overlap (22-595:1-608) 10 20 30 40 50 60 mKIAA1 DSLCGQMGLYGQACPSVTSLRMTSELESSLTSMDWLPQLTMRAAIQKSDATQNAHGTGIS ::::::::::::::::::::::::::::::::::::::: gi|194 MTSELESSLTSMDWLPQLTMRAAIQKSDATQNAHGTGIS 10 20 30 70 80 90 100 110 120 mKIAA1 KKNALLDPNTTLDQEEVQQHKDGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 KKNALLDPNTTLDQEEVQQHKDGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPY 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 YREAGSGWKNSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDTLPTRPKKRARSV :::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::: gi|194 YREAGSGWKNSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALPTRPKKRARSV 100 110 120 130 140 150 190 200 mKIAA1 ER----------------------------------VTLYNADQDGSDSPRSSLNNSLSD :: :::::.:::::::::::::::::: gi|194 ERASTPYSIDSDSLGMECIISGSASPTLAINTVTNKVTLYNTDQDGSDSPRSSLNNSLSD 160 170 180 190 200 210 210 220 230 240 250 260 mKIAA1 QSLASVNLNSVGSVHSYTPVTNHPEPVSQPLTPQQQQQPQYNLPEREKQLLFTEYNFEDL ::::::::::::::::::::::::::::: :::::: ::::::::.:::::.::::::: gi|194 QSLASVNLNSVGSVHSYTPVTNHPEPVSQSLTPQQQ--PQYNLPERDKQLLFSEYNFEDL 220 230 240 250 260 270 270 280 290 300 310 320 mKIAA1 SASFRSLYKSVFEQSLSQQGLMSIPSESSQQSHTSCSYQHSPSSTVTSHPHSNQSSLPNN ::::::::::::::::::::::.:::::::::::::::::::::::.:::::::::: :. gi|194 SASFRSLYKSVFEQSLSQQGLMNIPSESSQQSHTSCSYQHSPSSTVSSHPHSNQSSLSNS 280 290 300 310 320 330 330 340 350 360 370 380 mKIAA1 HSG-LSATGSNS-VAQVSLSHPQMHPQPSPHTPHRPHGLPQHPQRPQHPAPHPQQHSQLQ :.: :..::::: :::::::::::: ::::: :::::::::::::::::::::::::::: gi|194 HGGGLNTTGSNSSVAQVSLSHPQMHTQPSPHPPHRPHGLPQHPQRPQHPAPHPQQHSQLQ 340 350 360 370 380 390 390 400 410 420 430 440 mKIAA1 PPHSQHPPPHQHIQHHPNHQHQTLAHQPPPPPQQVSCNSGVSSDWYATLDMLKESCRIAS :: ::: ::::::::::::::::::: ::::::::::::::.::::::::::::::::: gi|194 SPHPQHPSPHQHIQHHPNHQHQTLAHQAPPPPQQVSCNSGVSNDWYATLDMLKESCRIAS 400 410 420 430 440 450 450 460 470 480 490 500 mKIAA1 SVNWSDVDLSQFQGLMESMRQADLKNWSLDQVQFADLCSSLNQFFTQTGLIHSQSNVPQN ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :: gi|194 SVNWSDVDLSQFQGLMESMRQADLKNWSLDQVQFADLCSSLNQFFTQTGLIHSQSNVQQN 460 470 480 490 500 510 510 520 530 540 550 560 mKIAA1 VCHGAMHPAKPSQHIGAGNLYIDSRQSLPPSVMPPPGYPHIPQALNTPGTTMAGHHGAMN ::::::::.:::::::.:::::::::.::::::::::::::::::.:::::.:::::::: gi|194 VCHGAMHPTKPSQHIGTGNLYIDSRQNLPPSVMPPPGYPHIPQALSTPGTTIAGHHGAMN 520 530 540 550 560 570 570 580 590 mKIAA1 QQHMMPSQAFPMRRPLPPDDIQDDFDWDSIV :::::::::: ::: :::::::::::::::: gi|194 QQHMMPSQAFQMRRSLPPDDIQDDFDWDSIV 580 590 600 >>gi|73976695|ref|XP_855802.1| PREDICTED: similar to for (433 aa) initn: 2180 init1: 1810 opt: 2682 Z-score: 2264.7 bits: 428.6 E(): 1.9e-117 Smith-Waterman score: 2682; 92.048% identity (95.663% similar) in 415 aa overlap (182-595:21-433) 160 170 180 190 200 210 mKIAA1 PGKGSYWAIDTNPKEDTLPTRPKKRARSVERVTLYNADQDGSDSPRSSLNNSLSDQSLAS .:::::.::::::::::::::::::::::: gi|739 MECIISGSASPTLAINTVTNKVTLYNTDQDGSDSPRSSLNNSLSDQSLAS 10 20 30 40 50 220 230 240 250 260 270 mKIAA1 VNLNSVGSVHSYTPVTNHPEPVSQPLTPQQQQQPQYNLPEREKQLLFTEYNFEDLSASFR :::::::::::::::::::::::: ::::: :::::::::.:::::.:::::::::::: gi|739 VNLNSVGSVHSYTPVTNHPEPVSQSLTPQQ--QPQYNLPERDKQLLFSEYNFEDLSASFR 60 70 80 90 100 280 290 300 310 320 330 mKIAA1 SLYKSVFEQSLSQQGLMSIPSESSQQSHTSCSYQHSPSSTVTSHPHSNQSSLPNNHSG-L :::::::::::::::::.:::::::::::::::::::::::.:::::::::: :::.: : gi|739 SLYKSVFEQSLSQQGLMTIPSESSQQSHTSCSYQHSPSSTVSSHPHSNQSSLSNNHGGGL 110 120 130 140 150 160 340 350 360 370 380 390 mKIAA1 SATGSNSVAQVSLSHPQMHPQPSPHTPHRPHGLPQHPQRPQHPAPHPQQHSQLQPPHSQH :.::::::::::: : ::: ::::: ::::::::::::::::: :::::::::::: :: gi|739 STTGSNSVAQVSLPHSQMHTQPSPHPSHRPHGLPQHPQRPQHPASHPQQHSQLQPPHPQH 170 180 190 200 210 220 400 410 420 430 440 450 mKIAA1 PPPHQHIQHHPNHQHQTLAHQPPPPPQQVSCNSGVSSDWYATLDMLKESCRIASSVNWSD : ::::::::::::::::.:: :: :::::::::::.::::::::::::::::::::::: gi|739 PSPHQHIQHHPNHQHQTLTHQAPPTPQQVSCNSGVSNDWYATLDMLKESCRIASSVNWSD 230 240 250 260 270 280 460 470 480 490 500 510 mKIAA1 VDLSQFQGLMESMRQADLKNWSLDQVQFADLCSSLNQFFTQTGLIHSQSNVPQNVCHGAM ::::::::::::::::::::::::::::::::::::::::::::::::::: :::::::: gi|739 VDLSQFQGLMESMRQADLKNWSLDQVQFADLCSSLNQFFTQTGLIHSQSNVQQNVCHGAM 290 300 310 320 330 340 520 530 540 550 560 570 mKIAA1 HPAKPSQHIGAGNLYIDSRQSLPPSVMPPPGYPHIPQALNTPGTTMAGHHGAMNQQHMMP ::.:::::::.:::::::::.::::::::::::::::::.:::::.:::::::::::::: gi|739 HPTKPSQHIGTGNLYIDSRQNLPPSVMPPPGYPHIPQALSTPGTTIAGHHGAMNQQHMMP 350 360 370 380 390 400 580 590 mKIAA1 SQAFPMRRPLPPDDIQDDFDWDSIV :::: ::: :::::::::::::::: gi|739 SQAFQMRRSLPPDDIQDDFDWDSIV 410 420 430 >>gi|73976697|ref|XP_532540.2| PREDICTED: similar to for (622 aa) initn: 2985 init1: 1810 opt: 2682 Z-score: 2262.7 bits: 428.8 E(): 2.5e-117 Smith-Waterman score: 3788; 89.263% identity (91.667% similar) in 624 aa overlap (7-595:1-622) 10 20 30 40 50 60 mKIAA1 DSLCGQMGLYGQACPSVTSLRMTSELESSLTSMDWLPQLTMRAAIQKSDATQNAHGTGIS :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 MGLYGQACPSVTSLRMTSELESSLTSMDWLPQLTMRAAIQKSDATQNAHGTGIS 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 KKNALLDPNTTLDQEEVQQHKDGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 KKNALLDPNTTLDQEEVQQHKDGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPY 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 YREAGSGWKNSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDTLPTRPKKRARSV :::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::: gi|739 YREAGSGWKNSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALPTRPKKRARSV 120 130 140 150 160 170 190 200 mKIAA1 ER----------------------------------VTLYNADQDGSDSPRSSLNNSLSD :: :::::.:::::::::::::::::: gi|739 ERASTPYSIDSDSLGMECIISGSASPTLAINTVTNKVTLYNTDQDGSDSPRSSLNNSLSD 180 190 200 210 220 230 210 220 230 240 250 260 mKIAA1 QSLASVNLNSVGSVHSYTPVTNHPEPVSQPLTPQQQQQPQYNLPEREKQLLFTEYNFEDL ::::::::::::::::::::::::::::: :::::: ::::::::.:::::.::::::: gi|739 QSLASVNLNSVGSVHSYTPVTNHPEPVSQSLTPQQQ--PQYNLPERDKQLLFSEYNFEDL 240 250 260 270 280 290 270 280 290 300 310 320 mKIAA1 SASFRSLYKSVFEQSLSQQGLMSIPSESSQQSHTSCSYQHSPSSTVTSHPHSNQSSLPNN ::::::::::::::::::::::.:::::::::::::::::::::::.:::::::::: :: gi|739 SASFRSLYKSVFEQSLSQQGLMTIPSESSQQSHTSCSYQHSPSSTVSSHPHSNQSSLSNN 300 310 320 330 340 350 330 340 350 360 370 380 mKIAA1 HSG-LSATGSNSVAQVSLSHPQMHPQPSPHTPHRPHGLPQHPQRPQHPAPHPQQHSQLQP :.: ::.::::::::::: : ::: ::::: ::::::::::::::::: :::::::::: gi|739 HGGGLSTTGSNSVAQVSLPHSQMHTQPSPHPSHRPHGLPQHPQRPQHPASHPQQHSQLQP 360 370 380 390 400 410 390 400 410 420 430 440 mKIAA1 PHSQHPPPHQHIQHHPNHQHQTLAHQPPPPPQQVSCNSGVSSDWYATLDMLKESCRIASS :: ::: ::::::::::::::::.:: :: :::::::::::.:::::::::::::::::: gi|739 PHPQHPSPHQHIQHHPNHQHQTLTHQAPPTPQQVSCNSGVSNDWYATLDMLKESCRIASS 420 430 440 450 460 470 450 460 470 480 490 500 mKIAA1 VNWSDVDLSQFQGLMESMRQADLKNWSLDQVQFADLCSSLNQFFTQTGLIHSQSNVPQNV :::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::: gi|739 VNWSDVDLSQFQGLMESMRQADLKNWSLDQVQFADLCSSLNQFFTQTGLIHSQSNVQQNV 480 490 500 510 520 530 510 520 530 540 550 560 mKIAA1 CHGAMHPAKPSQHIGAGNLYIDSRQSLPPSVMPPPGYPHIPQALNTPGTTMAGHHGAMNQ :::::::.:::::::.:::::::::.::::::::::::::::::.:::::.::::::::: gi|739 CHGAMHPTKPSQHIGTGNLYIDSRQNLPPSVMPPPGYPHIPQALSTPGTTIAGHHGAMNQ 540 550 560 570 580 590 570 580 590 mKIAA1 QHMMPSQAFPMRRPLPPDDIQDDFDWDSIV ::::::::: ::: :::::::::::::::: gi|739 QHMMPSQAFQMRRSLPPDDIQDDFDWDSIV 600 610 620 >>gi|8134814|sp|Q9UPW0.1|FOXJ3_HUMAN RecName: Full=Forkh (622 aa) initn: 3525 init1: 1830 opt: 2678 Z-score: 2259.4 bits: 428.1 E(): 3.8e-117 Smith-Waterman score: 3784; 88.942% identity (91.827% similar) in 624 aa overlap (7-595:1-622) 10 20 30 40 50 60 mKIAA1 DSLCGQMGLYGQACPSVTSLRMTSELESSLTSMDWLPQLTMRAAIQKSDATQNAHGTGIS :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|813 MGLYGQACPSVTSLRMTSELESSLTSMDWLPQLTMRAAIQKSDATQNAHGTGIS 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 KKNALLDPNTTLDQEEVQQHKDGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|813 KKNALLDPNTTLDQEEVQQHKDGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPY 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 YREAGSGWKNSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDTLPTRPKKRARSV :::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::: gi|813 YREAGSGWKNSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALPTRPKKRARSV 120 130 140 150 160 170 190 200 mKIAA1 ER----------------------------------VTLYNADQDGSDSPRSSLNNSLSD :: :::::.:::::::::::::::::: gi|813 ERASTPYSIDSDSLGMECIISGSASPTLAINTVTNKVTLYNTDQDGSDSPRSSLNNSLSD 180 190 200 210 220 230 210 220 230 240 250 260 mKIAA1 QSLASVNLNSVGSVHSYTPVTNHPEPVSQPLTPQQQQQPQYNLPEREKQLLFTEYNFEDL :::::::::::::::::::::.::: ::: :::::: ::::::::.:::::.::::::: gi|813 QSLASVNLNSVGSVHSYTPVTSHPESVSQSLTPQQQ--PQYNLPERDKQLLFSEYNFEDL 240 250 260 270 280 290 270 280 290 300 310 320 mKIAA1 SASFRSLYKSVFEQSLSQQGLMSIPSESSQQSHTSCSYQHSPSSTVTSHPHSNQSSLPNN ::::::::::::::::::::::.:::::::::::::.:::::::::..::::::::: :. gi|813 SASFRSLYKSVFEQSLSQQGLMNIPSESSQQSHTSCTYQHSPSSTVSTHPHSNQSSLSNS 300 310 320 330 340 350 330 340 350 360 370 380 mKIAA1 H-SGLSATGSNSVAQVSLSHPQMHPQPSPHTPHRPHGLPQHPQRPQHPAPHPQQHSQLQP : :::..::::::::::::::::::::::: ::::::::::::: ::::::::::::: gi|813 HGSGLNTTGSNSVAQVSLSHPQMHPQPSPHPPHRPHGLPQHPQRSPHPAPHPQQHSQLQS 360 370 380 390 400 410 390 400 410 420 430 440 mKIAA1 PHSQHPPPHQHIQHHPNHQHQTLAHQPPPPPQQVSCNSGVSSDWYATLDMLKESCRIASS :: ::: ::::::::::::::::.:: ::::::::::::::.:::::::::::::::::: gi|813 PHPQHPSPHQHIQHHPNHQHQTLTHQAPPPPQQVSCNSGVSNDWYATLDMLKESCRIASS 420 430 440 450 460 470 450 460 470 480 490 500 mKIAA1 VNWSDVDLSQFQGLMESMRQADLKNWSLDQVQFADLCSSLNQFFTQTGLIHSQSNVPQNV :::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::: gi|813 VNWSDVDLSQFQGLMESMRQADLKNWSLDQVQFADLCSSLNQFFTQTGLIHSQSNVQQNV 480 490 500 510 520 530 510 520 530 540 550 560 mKIAA1 CHGAMHPAKPSQHIGAGNLYIDSRQSLPPSVMPPPGYPHIPQALNTPGTTMAGHHGAMNQ :::::::.:::::::.:::::::::.::::::::::::::::::.:::::::::: :::: gi|813 CHGAMHPTKPSQHIGTGNLYIDSRQNLPPSVMPPPGYPHIPQALSTPGTTMAGHHRAMNQ 540 550 560 570 580 590 570 580 590 mKIAA1 QHMMPSQAFPMRRPLPPDDIQDDFDWDSIV ::::::::: ::: :::::::::::::::: gi|813 QHMMPSQAFQMRRSLPPDDIQDDFDWDSIV 600 610 620 >>gi|109003247|ref|XP_001085783.1| PREDICTED: similar to (622 aa) initn: 3517 init1: 1819 opt: 2670 Z-score: 2252.7 bits: 426.9 E(): 9.1e-117 Smith-Waterman score: 3776; 88.942% identity (91.667% similar) in 624 aa overlap (7-595:1-622) 10 20 30 40 50 60 mKIAA1 DSLCGQMGLYGQACPSVTSLRMTSELESSLTSMDWLPQLTMRAAIQKSDATQNAHGTGIS :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 MGLYGQACPSVTSLRMTSELESSLTSMDWLPQLTMRAAIQKSDATQNAHGTGIS 10 20 30 40 50 70 80 90 100 110 120 mKIAA1 KKNALLDPNTTLDQEEVQQHKDGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 KKNALLDPNTTLDQEEVQQHKDGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPY 60 70 80 90 100 110 130 140 150 160 170 180 mKIAA1 YREAGSGWKNSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDTLPTRPKKRARSV :::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::: gi|109 YREAGSGWKNSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDTNPKEDALPTRPKKRARSV 120 130 140 150 160 170 190 200 mKIAA1 ER----------------------------------VTLYNADQDGSDSPRSSLNNSLSD :: :::::.:::::::::::::::::: gi|109 ERASTPYSIDSDSLGMECIISGSASPTLAINTVTNKVTLYNTDQDGSDSPRSSLNNSLSD 180 190 200 210 220 230 210 220 230 240 250 260 mKIAA1 QSLASVNLNSVGSVHSYTPVTNHPEPVSQPLTPQQQQQPQYNLPEREKQLLFTEYNFEDL :::::::::::::::::::::.::: ::: :::::: ::::::::.:::::.::::::: gi|109 QSLASVNLNSVGSVHSYTPVTSHPESVSQSLTPQQQ--PQYNLPERDKQLLFSEYNFEDL 240 250 260 270 280 290 270 280 290 300 310 320 mKIAA1 SASFRSLYKSVFEQSLSQQGLMSIPSESSQQSHTSCSYQHSPSSTVTSHPHSNQSSLPNN ::::::::::::::::::::::.:::::::::::::::::::::::..::::::::: :. gi|109 SASFRSLYKSVFEQSLSQQGLMNIPSESSQQSHTSCSYQHSPSSTVSTHPHSNQSSLSNS 300 310 320 330 340 350 330 340 350 360 370 380 mKIAA1 H-SGLSATGSNSVAQVSLSHPQMHPQPSPHTPHRPHGLPQHPQRPQHPAPHPQQHSQLQP : :::..::::::::::::::::: ::::: ::::::::::::: ::::::::::::: gi|109 HGSGLNTTGSNSVAQVSLSHPQMHTQPSPHPPHRPHGLPQHPQRSPHPAPHPQQHSQLQS 360 370 380 390 400 410 390 400 410 420 430 440 mKIAA1 PHSQHPPPHQHIQHHPNHQHQTLAHQPPPPPQQVSCNSGVSSDWYATLDMLKESCRIASS :: ::: ::::::::::::::::.:: ::::::::::::::.:::::::::::::::::: gi|109 PHPQHPSPHQHIQHHPNHQHQTLTHQAPPPPQQVSCNSGVSNDWYATLDMLKESCRIASS 420 430 440 450 460 470 450 460 470 480 490 500 mKIAA1 VNWSDVDLSQFQGLMESMRQADLKNWSLDQVQFADLCSSLNQFFTQTGLIHSQSNVPQNV :::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::: gi|109 VNWSDVDLSQFQGLMESMRQADLKNWSLDQVQFADLCSSLNQFFTQTGLIHSQSNVQQNV 480 490 500 510 520 530 510 520 530 540 550 560 mKIAA1 CHGAMHPAKPSQHIGAGNLYIDSRQSLPPSVMPPPGYPHIPQALNTPGTTMAGHHGAMNQ :::::::.:::::::.:::::::::.::::::::::::::::::.:::::::::: :::: gi|109 CHGAMHPTKPSQHIGTGNLYIDSRQNLPPSVMPPPGYPHIPQALSTPGTTMAGHHRAMNQ 540 550 560 570 580 590 570 580 590 mKIAA1 QHMMPSQAFPMRRPLPPDDIQDDFDWDSIV ::::::::: ::: :::::::::::::::: gi|109 QHMMPSQAFQMRRSLPPDDIQDDFDWDSIV 600 610 620 595 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Tue Mar 17 17:07:30 2009 done: Tue Mar 17 17:14:51 2009 Total Scan time: 980.980 Total Display time: 0.210 Function used was FASTA [version 34.26.5 April 26, 2007]