FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA1718.ptfa, 433 aa vs ./tmplib.26680 library 1768584 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 6.9598+/-0.00596; mu= 5.6514+/- 0.398 mean_var=167.4266+/-39.084, 0's: 0 Z-trim: 3 B-trim: 0 in 0/36 Lambda= 0.0991 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA0662 ( 1038 res) mth02305 (1038) 183 38 0.0034 >>mKIAA0662 ( 1038 res) mth02305 (1038 aa) initn: 272 init1: 160 opt: 183 Z-score: 149.7 bits: 38.1 E(): 0.0034 Smith-Waterman score: 203; 24.742% identity (34.867% ungapped) in 582 aa overlap (1-427:467-1034) 10 20 30 mKIAA1 RRKMRKLRDHNVRTPSNLDILELHTREVLK ..: .: .. : :::.:: ::.:.: mKIAA0 KTVKMPKPSKIPKPPKSPKPPKTLKLKDGSKKKGKKCKESASPTIPNLDLLEAHTKEALT 440 450 460 470 480 490 40 50 60 70 mKIAA1 RLEMCPWEEDLLSSKLN--GKFNKHLQ------------PSSTVPEWRAKDNDLRLLLT- ..: : . .: :. .: . : : :.. .:. :.. :: mKIAA0 KMEP-PKKGKTPKSVLSVPNKDTVHTQNDMERLEIREQTKSKSEAKWKYKNSKPDSLLKM 500 510 520 530 540 550 80 90 100 mKIAA1 --NGRI-------IKDE-------RQLFADRSLYTADSEN--------EEDK-KP----- . :. ::. :.:.....: .: . .::: :: mKIAA0 EEEQRLEKSPLAGNKDKFSFSFSNRKLLGSKALRPPSSPGVFGALQSFKEDKAKPVRDEY 560 570 580 590 600 610 110 120 130 140 150 mKIAA1 ---TQNANMKTEQSSGREEAESQGSPK-PLNRIFTSVRSEL--RSRPSEYSDGSDSEDSG ......: .. :.. ...:: :. .. . .. : :.:. : :.::. mKIAA0 EYVSDDGELKIDEFPIRRK---KSAPKRDLSFLLDKKEALLMPTSKPKLDSAVYKSDDSS 620 630 640 650 660 670 160 170 180 190 200 210 mKIAA1 PDCTALKINFATEDSESSGDEKKHEITSHFKEESDIVRNLLQKSQKPSRQEIPVKRECPT : .:.:. :. .... ::. .: . . .::: :.. . : . . :. mKIAA0 -DEGSLHIDTDTKPGRNA-KVKKESGSS-----AAGILDLLQASEEVGALEYNPNSQPPA 680 690 700 710 720 220 230 240 250 260 270 mKIAA1 STSTEEEAIQGMLSMAGLHYS-SCLQRQIQSTDCSGEKNSLQDPSSCHGSNP-------- : ::.: :::::::::.:. : :::: . . .: . . . . :.: mKIAA0 SPSTQE-AIQGMLSMANLQASDSCLQTTWGTGQAKGGSLAAHGARKIGGGNKGTGKRLLK 730 740 750 760 770 780 280 290 300 mKIAA1 -------------EFRQLYRCNKPVEFGYHAKTEDQD---LMTSSWNKQ------FDRTS : .: : : .. : . :.: . . : ... .. :. mKIAA0 RTAKNSVDLEDYEEQDHLDACFKDSDYVYPSLESDEDNPVFKSRSKKRKGSDDAPYSPTA 790 800 810 820 830 840 310 320 330 mKIAA1 RFNA----QD----------------------LS-------RSQKHIK-KESSSEINQKA : . :: :: :..:. : : .:. . . mKIAA0 RVGPSVPRQDRPVREGTRVASIETGLAAAAAKLSQQEEQKNRKKKNTKRKPASNTASPSI 850 860 870 880 890 900 340 350 360 370 380 mKIAA1 QSRHCVDSNSSSIQNGKYTLNP-------------SLVSCQISNGSLSPERPIGETSFSM .. ......: .. . .: : .: : :. . ::: : : :. mKIAA0 STSASASTGTTSASTTPASTTPASTTPASTTPASTSTASSQASQEGSSPEPPPESHSSSL 910 920 930 940 950 960 390 400 410 mKIAA1 ---------------------PLHP-----TKRPASNPPPISNQATKGKRPKKGMATAKQ :. : .::... : .: :.:::: ::::::::: mKIAA0 ADHEYTAAGTFSGSQAGRASQPMAPGVFLTQRRPSASSP--NNTAAKGKRTKKGMATAKQ 970 980 990 1000 1010 1020 420 430 mKIAA1 RLGKILKLNRNGHARFFV :::::::..:::. mKIAA0 RLGKILKIHRNGKLLL 1030 433 residues in 1 query sequences 1768584 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:51:34 2006 done: Mon Mar 27 10:51:35 2006 Scan time: 0.630 Display time: 0.040 Function used was FASTA [version 3.4t11 Apr 17, 2002]