# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mpm06246.fasta.nr -Q ../query/mKIAA0102.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
mKIAA0102, 215 aa
vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library
2727779818 residues in 7921681 sequences
statistics sampled from 60000 to 7921146 sequences
Expectation_n fit: rho(ln(x))= 5.1207+/-0.000184; mu= 8.6329+/- 0.010
mean_var=68.8268+/-13.421, 0's: 30 Z-trim: 32 B-trim: 1698 in 1/67
Lambda= 0.154595
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 36, opt: 24, open/ext: -10/-2, width: 16
The best scores are: opt bits E(7921681)
gi|20140233|sp|Q9CYN2.1|SPCS2_MOUSE RecName: Full= ( 226) 1439 329.2 3e-88
gi|29747827|gb|AAH50150.1| Signal peptidase comple ( 226) 1433 327.9 7.6e-88
gi|109459108|ref|XP_214994.3| PREDICTED: similar t ( 226) 1432 327.7 8.9e-88
gi|12852073|dbj|BAB29262.1| unnamed protein produc ( 223) 1418 324.5 7.6e-87
gi|3183167|sp|Q28250|SPCS2_CANFA Signal peptidase ( 226) 1417 324.3 9e-87
gi|149719293|ref|XP_001498087.1| PREDICTED: simila ( 226) 1415 323.9 1.2e-86
gi|194673376|ref|XP_001254330.2| PREDICTED: simila ( 226) 1412 323.2 1.9e-86
gi|73919438|sp|Q4R512|SPCS2_MACFA Signal peptidase ( 226) 1393 319.0 3.7e-85
gi|109075548|ref|XP_001101980.1| PREDICTED: simila ( 226) 1392 318.7 4.3e-85
gi|6648110|sp|Q15005.3|SPCS2_HUMAN RecName: Full=S ( 226) 1386 317.4 1.1e-84
gi|194375470|dbj|BAG56680.1| unnamed protein produ ( 226) 1382 316.5 2e-84
gi|40787675|gb|AAH64957.1| SPCS2 protein [Homo sap ( 226) 1381 316.3 2.4e-84
gi|114639385|ref|XP_001174940.1| PREDICTED: hypoth ( 226) 1380 316.1 2.7e-84
gi|119628117|gb|EAX07712.1| hCG18930 [Homo sapiens ( 226) 1376 315.2 5.1e-84
gi|73919439|sp|Q5RAY6.1|SPCS2_PONAB RecName: Full= ( 226) 1374 314.7 6.9e-84
gi|126327888|ref|XP_001367075.1| PREDICTED: simila ( 441) 1234 283.7 3e-74
gi|224044123|ref|XP_002187525.1| PREDICTED: signal ( 201) 1218 279.9 1.9e-73
gi|118085355|ref|XP_417247.2| PREDICTED: similar t ( 245) 1207 277.5 1.2e-72
gi|149629672|ref|XP_001518483.1| PREDICTED: hypoth ( 214) 1164 267.9 8.4e-70
gi|73919440|sp|Q5M8Y1.1|SPCS2_XENTR RecName: Full= ( 201) 1152 265.2 5.1e-69
gi|146327088|gb|AAI41734.1| LOC100049747 protein [ ( 204) 1121 258.3 6.2e-67
gi|28174950|gb|AAH10547.2| Spcs2 protein [Mus musc ( 167) 1100 253.5 1.4e-65
gi|148684466|gb|EDL16413.1| mCG7038, isoform CRA_c ( 165) 1051 242.6 2.6e-62
gi|73919436|sp|Q5BJI9.1|SPCS2_DANRE RecName: Full= ( 201) 1026 237.1 1.5e-60
gi|209736478|gb|ACI69108.1| Probable signal peptid ( 201) 1010 233.5 1.7e-59
gi|223646806|gb|ACN10161.1| Probable signal peptid ( 201) 1001 231.5 7e-59
gi|47216502|emb|CAG02153.1| unnamed protein produc (1253) 1006 233.2 1.4e-58
gi|28195697|gb|AAO27767.1| signal peptidase 25 kDA ( 186) 964 223.2 2e-56
gi|148684464|gb|EDL16411.1| mCG7038, isoform CRA_a ( 123) 808 188.3 4.3e-46
gi|210107725|gb|EEA55651.1| hypothetical protein B ( 203) 801 186.9 1.9e-45
gi|210122510|gb|EEA70216.1| hypothetical protein B ( 203) 801 186.9 1.9e-45
gi|215501946|gb|EEC11440.1| signal peptidase compl ( 203) 800 186.7 2.2e-45
gi|149068822|gb|EDM18374.1| rCG40120, isoform CRA_ ( 134) 740 173.2 1.7e-41
gi|156222479|gb|EDO43323.1| predicted protein [Nem ( 203) 709 166.4 2.8e-39
gi|72103997|ref|XP_796295.1| PREDICTED: similar to ( 195) 685 161.0 1.1e-37
gi|48097144|ref|XP_393701.1| PREDICTED: similar to ( 192) 678 159.5 3.3e-37
gi|198428217|ref|XP_002126209.1| PREDICTED: simila ( 228) 658 155.0 8.2e-36
gi|169208178|ref|XP_001719080.1| PREDICTED: hypoth ( 108) 633 149.2 2.2e-34
gi|169208806|ref|XP_001717543.1| PREDICTED: hypoth ( 106) 625 147.5 7.4e-34
gi|212508302|gb|EEB12041.1| microsomal signal pept ( 195) 625 147.6 1.2e-33
gi|109075550|ref|XP_001101882.1| PREDICTED: simila ( 157) 594 140.7 1.2e-31
gi|167870256|gb|EDS33639.1| signal peptidase compl ( 193) 573 136.0 3.7e-30
gi|193671699|ref|XP_001950753.1| PREDICTED: simila ( 193) 573 136.0 3.7e-30
gi|118429519|gb|ABK91807.1| signal peptidase 25 KD ( 190) 572 135.8 4.2e-30
gi|94468468|gb|ABF18083.1| signal peptidase comple ( 194) 563 133.8 1.7e-29
gi|194149542|gb|EDW65233.1| GJ19154 [Drosophila vi ( 193) 559 132.9 3.2e-29
gi|157013363|gb|EAA00503.4| AGAP011842-PA [Anophel ( 196) 559 132.9 3.2e-29
gi|193908770|gb|EDW07637.1| GI14750 [Drosophila mo ( 193) 555 132.0 5.9e-29
gi|87248409|gb|ABD36257.1| signal peptidase comple ( 184) 549 130.7 1.4e-28
gi|190625789|gb|EDV41313.1| GF23480 [Drosophila an ( 193) 543 129.3 3.8e-28
>>gi|20140233|sp|Q9CYN2.1|SPCS2_MOUSE RecName: Full=Sign (226 aa)
initn: 1439 init1: 1439 opt: 1439 Z-score: 1740.7 bits: 329.2 E(): 3e-88
Smith-Waterman score: 1439; 100.000% identity (100.000% similar) in 215 aa overlap (1-215:12-226)
10 20 30 40
mKIAA0 GGGGGSSGAGGGPSCGTSSSRSGLLDKWKIDDKPVKIDKWDGSAVKNSL
:::::::::::::::::::::::::::::::::::::::::::::::::
gi|201 MAASASQGGRSGGGGGSSGAGGGPSCGTSSSRSGLLDKWKIDDKPVKIDKWDGSAVKNSL
10 20 30 40 50 60
50 60 70 80 90 100
mKIAA0 DDSAKKVLLEKYKYVENFGLIDGRLTICTISCFFAIVALIWDYMHPFPESKPVLALCVIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|201 DDSAKKVLLEKYKYVENFGLIDGRLTICTISCFFAIVALIWDYMHPFPESKPVLALCVIS
70 80 90 100 110 120
110 120 130 140 150 160
mKIAA0 YFVMMGILTIYTSYKEKSIFLVAHRKDPTGMDPDDIWQLSSSLKRFDDKYTLKLTFISGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|201 YFVMMGILTIYTSYKEKSIFLVAHRKDPTGMDPDDIWQLSSSLKRFDDKYTLKLTFISGR
130 140 150 160 170 180
170 180 190 200 210
mKIAA0 TKQQREAEFTKSIAKFFDHSGTLVMDAYEPEISRLHDSLATERKIK
::::::::::::::::::::::::::::::::::::::::::::::
gi|201 TKQQREAEFTKSIAKFFDHSGTLVMDAYEPEISRLHDSLATERKIK
190 200 210 220
>>gi|29747827|gb|AAH50150.1| Signal peptidase complex su (226 aa)
initn: 1433 init1: 1433 opt: 1433 Z-score: 1733.4 bits: 327.9 E(): 7.6e-88
Smith-Waterman score: 1433; 99.535% identity (99.535% similar) in 215 aa overlap (1-215:12-226)
10 20 30 40
mKIAA0 GGGGGSSGAGGGPSCGTSSSRSGLLDKWKIDDKPVKIDKWDGSAVKNSL
:::::::::::::::::::::::::::::::::::::::::::::::::
gi|297 MAASASQGGRSGGGGGSSGAGGGPSCGTSSSRSGLLDKWKIDDKPVKIDKWDGSAVKNSL
10 20 30 40 50 60
50 60 70 80 90 100
mKIAA0 DDSAKKVLLEKYKYVENFGLIDGRLTICTISCFFAIVALIWDYMHPFPESKPVLALCVIS
::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::
gi|297 DDSAKKVLLEKYKYVENFGLIDGRLTICTISCFFAIVALIWDYMHPFPEPKPVLALCVIS
70 80 90 100 110 120
110 120 130 140 150 160
mKIAA0 YFVMMGILTIYTSYKEKSIFLVAHRKDPTGMDPDDIWQLSSSLKRFDDKYTLKLTFISGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|297 YFVMMGILTIYTSYKEKSIFLVAHRKDPTGMDPDDIWQLSSSLKRFDDKYTLKLTFISGR
130 140 150 160 170 180
170 180 190 200 210
mKIAA0 TKQQREAEFTKSIAKFFDHSGTLVMDAYEPEISRLHDSLATERKIK
::::::::::::::::::::::::::::::::::::::::::::::
gi|297 TKQQREAEFTKSIAKFFDHSGTLVMDAYEPEISRLHDSLATERKIK
190 200 210 220
>>gi|109459108|ref|XP_214994.3| PREDICTED: similar to si (226 aa)
initn: 1432 init1: 1432 opt: 1432 Z-score: 1732.2 bits: 327.7 E(): 8.9e-88
Smith-Waterman score: 1432; 99.070% identity (99.535% similar) in 215 aa overlap (1-215:12-226)
10 20 30 40
mKIAA0 GGGGGSSGAGGGPSCGTSSSRSGLLDKWKIDDKPVKIDKWDGSAVKNSL
:::::::: ::::::::::::::::::::::::::::::::::::::::
gi|109 MAAAASQGGRSGGGGGSSGPGGGPSCGTSSSRSGLLDKWKIDDKPVKIDKWDGSAVKNSL
10 20 30 40 50 60
50 60 70 80 90 100
mKIAA0 DDSAKKVLLEKYKYVENFGLIDGRLTICTISCFFAIVALIWDYMHPFPESKPVLALCVIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:
gi|109 DDSAKKVLLEKYKYVENFGLIDGRLTICTISCFFAIVALIWDYMHPFPESKPVLALCVVS
70 80 90 100 110 120
110 120 130 140 150 160
mKIAA0 YFVMMGILTIYTSYKEKSIFLVAHRKDPTGMDPDDIWQLSSSLKRFDDKYTLKLTFISGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 YFVMMGILTIYTSYKEKSIFLVAHRKDPTGMDPDDIWQLSSSLKRFDDKYTLKLTFISGR
130 140 150 160 170 180
170 180 190 200 210
mKIAA0 TKQQREAEFTKSIAKFFDHSGTLVMDAYEPEISRLHDSLATERKIK
::::::::::::::::::::::::::::::::::::::::::::::
gi|109 TKQQREAEFTKSIAKFFDHSGTLVMDAYEPEISRLHDSLATERKIK
190 200 210 220
>>gi|12852073|dbj|BAB29262.1| unnamed protein product [M (223 aa)
initn: 1418 init1: 1418 opt: 1418 Z-score: 1715.4 bits: 324.5 E(): 7.6e-87
Smith-Waterman score: 1418; 99.528% identity (100.000% similar) in 212 aa overlap (1-212:12-223)
10 20 30 40
mKIAA0 GGGGGSSGAGGGPSCGTSSSRSGLLDKWKIDDKPVKIDKWDGSAVKNSL
:::::::::::::::::::::::::::::::::::::::::::::::::
gi|128 MAASASQGGRSGGGGGSSGAGGGPSCGTSSSRSGLLDKWKIDDKPVKIDKWDGSAVKNSL
10 20 30 40 50 60
50 60 70 80 90 100
mKIAA0 DDSAKKVLLEKYKYVENFGLIDGRLTICTISCFFAIVALIWDYMHPFPESKPVLALCVIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|128 DDSAKKVLLEKYKYVENFGLIDGRLTICTISCFFAIVALIWDYMHPFPESKPVLALCVIS
70 80 90 100 110 120
110 120 130 140 150 160
mKIAA0 YFVMMGILTIYTSYKEKSIFLVAHRKDPTGMDPDDIWQLSSSLKRFDDKYTLKLTFISGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|128 YFVMMGILTIYTSYKEKSIFLVAHRKDPTGMDPDDIWQLSSSLKRFDDKYTLKLTFISGR
130 140 150 160 170 180
170 180 190 200 210
mKIAA0 TKQQREAEFTKSIAKFFDHSGTLVMDAYEPEISRLHDSLATERKIK
::::::::::::::::::::::::::::.::::::::::::::
gi|128 TKQQREAEFTKSIAKFFDHSGTLVMDAYDPEISRLHDSLATER
190 200 210 220
>>gi|3183167|sp|Q28250|SPCS2_CANFA Signal peptidase comp (226 aa)
initn: 1417 init1: 1417 opt: 1417 Z-score: 1714.1 bits: 324.3 E(): 9e-87
Smith-Waterman score: 1417; 97.674% identity (99.535% similar) in 215 aa overlap (1-215:12-226)
10 20 30 40
mKIAA0 GGGGGSSGAGGGPSCGTSSSRSGLLDKWKIDDKPVKIDKWDGSAVKNSL
:::::::: ::::.::..:.:::::::::::::::::::::::::::::
gi|318 MAAASAQGGRTGGGGGSSGPGGGPTCGSGSGRSGLLDKWKIDDKPVKIDKWDGSAVKNSL
10 20 30 40 50 60
50 60 70 80 90 100
mKIAA0 DDSAKKVLLEKYKYVENFGLIDGRLTICTISCFFAIVALIWDYMHPFPESKPVLALCVIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|318 DDSAKKVLLEKYKYVENFGLIDGRLTICTISCFFAIVALIWDYMHPFPESKPVLALCVIS
70 80 90 100 110 120
110 120 130 140 150 160
mKIAA0 YFVMMGILTIYTSYKEKSIFLVAHRKDPTGMDPDDIWQLSSSLKRFDDKYTLKLTFISGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|318 YFVMMGILTIYTSYKEKSIFLVAHRKDPTGMDPDDIWQLSSSLKRFDDKYTLKLTFISGR
130 140 150 160 170 180
170 180 190 200 210
mKIAA0 TKQQREAEFTKSIAKFFDHSGTLVMDAYEPEISRLHDSLATERKIK
::::::::::::::::::::::::::::::::::::::::::::::
gi|318 TKQQREAEFTKSIAKFFDHSGTLVMDAYEPEISRLHDSLATERKIK
190 200 210 220
>>gi|149719293|ref|XP_001498087.1| PREDICTED: similar to (226 aa)
initn: 1415 init1: 1415 opt: 1415 Z-score: 1711.7 bits: 323.9 E(): 1.2e-86
Smith-Waterman score: 1415; 98.605% identity (99.535% similar) in 215 aa overlap (1-215:12-226)
10 20 30 40
mKIAA0 GGGGGSSGAGGGPSCGTSSSRSGLLDKWKIDDKPVKIDKWDGSAVKNSL
:::::::::::: ::.:.:::::::::::::::::::::::::::::::
gi|149 MAAAAAQGGRTGGGGGSSGAGGGSSCATGSSRSGLLDKWKIDDKPVKIDKWDGSAVKNSL
10 20 30 40 50 60
50 60 70 80 90 100
mKIAA0 DDSAKKVLLEKYKYVENFGLIDGRLTICTISCFFAIVALIWDYMHPFPESKPVLALCVIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|149 DDSAKKVLLEKYKYVENFGLIDGRLTICTISCFFAIVALIWDYMHPFPESKPVLALCVIS
70 80 90 100 110 120
110 120 130 140 150 160
mKIAA0 YFVMMGILTIYTSYKEKSIFLVAHRKDPTGMDPDDIWQLSSSLKRFDDKYTLKLTFISGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|149 YFVMMGILTIYTSYKEKSIFLVAHRKDPTGMDPDDIWQLSSSLKRFDDKYTLKLTFISGR
130 140 150 160 170 180
170 180 190 200 210
mKIAA0 TKQQREAEFTKSIAKFFDHSGTLVMDAYEPEISRLHDSLATERKIK
::::::::::::::::::::::::::::::::::::::::::::::
gi|149 TKQQREAEFTKSIAKFFDHSGTLVMDAYEPEISRLHDSLATERKIK
190 200 210 220
>>gi|194673376|ref|XP_001254330.2| PREDICTED: similar to (226 aa)
initn: 1412 init1: 1412 opt: 1412 Z-score: 1708.1 bits: 323.2 E(): 1.9e-86
Smith-Waterman score: 1412; 98.140% identity (99.070% similar) in 215 aa overlap (1-215:12-226)
10 20 30 40
mKIAA0 GGGGGSSGAGGGPSCGTSSSRSGLLDKWKIDDKPVKIDKWDGSAVKNSL
:::::::::::: .:::.:::::::::::::::::::::::::::::::
gi|194 MAAAASQGGRAGGGGGSSGAGGGSGCGTGSSRSGLLDKWKIDDKPVKIDKWDGSAVKNSL
10 20 30 40 50 60
50 60 70 80 90 100
mKIAA0 DDSAKKVLLEKYKYVENFGLIDGRLTICTISCFFAIVALIWDYMHPFPESKPVLALCVIS
::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::
gi|194 DDSAKKVLLEKYKYVENFGLIDGRLIICTISCFFAIVALIWDYMHPFPESKPVLALCVIS
70 80 90 100 110 120
110 120 130 140 150 160
mKIAA0 YFVMMGILTIYTSYKEKSIFLVAHRKDPTGMDPDDIWQLSSSLKRFDDKYTLKLTFISGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|194 YFVMMGILTIYTSYKEKSIFLVAHRKDPTGMDPDDIWQLSSSLKRFDDKYTLKLTFISGR
130 140 150 160 170 180
170 180 190 200 210
mKIAA0 TKQQREAEFTKSIAKFFDHSGTLVMDAYEPEISRLHDSLATERKIK
::::::::::::::::::::::::::::::::::::::::::::::
gi|194 TKQQREAEFTKSIAKFFDHSGTLVMDAYEPEISRLHDSLATERKIK
190 200 210 220
>>gi|73919438|sp|Q4R512|SPCS2_MACFA Signal peptidase com (226 aa)
initn: 1393 init1: 1393 opt: 1393 Z-score: 1685.2 bits: 319.0 E(): 3.7e-85
Smith-Waterman score: 1393; 96.744% identity (99.070% similar) in 215 aa overlap (1-215:12-226)
10 20 30 40
mKIAA0 GGGGGSSGAGGGPSCGTSSSRSGLLDKWKIDDKPVKIDKWDGSAVKNSL
:: ::.:::::: .:::.:.:::::::::::::::::::::::::::::
gi|739 MAAAATQGGRSGGLGGNSGAGGGSNCGTGSGRSGLLDKWKIDDKPVKIDKWDGSAVKNSL
10 20 30 40 50 60
50 60 70 80 90 100
mKIAA0 DDSAKKVLLEKYKYVENFGLIDGRLTICTISCFFAIVALIWDYMHPFPESKPVLALCVIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|739 DDSAKKVLLEKYKYVENFGLIDGRLTICTISCFFAIVALIWDYMHPFPESKPVLALCVIS
70 80 90 100 110 120
110 120 130 140 150 160
mKIAA0 YFVMMGILTIYTSYKEKSIFLVAHRKDPTGMDPDDIWQLSSSLKRFDDKYTLKLTFISGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|739 YFVMMGILTIYTSYKEKSIFLVAHRKDPTGMDPDDIWQLSSSLKRFDDKYTLKLTFISGR
130 140 150 160 170 180
170 180 190 200 210
mKIAA0 TKQQREAEFTKSIAKFFDHSGTLVMDAYEPEISRLHDSLATERKIK
::::::::::::::::::::::::::::::::::::::::.:::::
gi|739 TKQQREAEFTKSIAKFFDHSGTLVMDAYEPEISRLHDSLAVERKIK
190 200 210 220
>>gi|109075548|ref|XP_001101980.1| PREDICTED: similar to (226 aa)
initn: 1392 init1: 1392 opt: 1392 Z-score: 1684.0 bits: 318.7 E(): 4.3e-85
Smith-Waterman score: 1392; 96.744% identity (98.605% similar) in 215 aa overlap (1-215:12-226)
10 20 30 40
mKIAA0 GGGGGSSGAGGGPSCGTSSSRSGLLDKWKIDDKPVKIDKWDGSAVKNSL
:: ::.:::::: .:::.:.:::::::::::::::::::::::::::::
gi|109 MAAAAAQGGRSGGLGGNSGAGGGSNCGTGSGRSGLLDKWKIDDKPVKIDKWDGSAVKNSL
10 20 30 40 50 60
50 60 70 80 90 100
mKIAA0 DDSAKKVLLEKYKYVENFGLIDGRLTICTISCFFAIVALIWDYMHPFPESKPVLALCVIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 DDSAKKVLLEKYKYVENFGLIDGRLTICTISCFFAIVALIWDYMHPFPESKPVLALCVIS
70 80 90 100 110 120
110 120 130 140 150 160
mKIAA0 YFVMMGILTIYTSYKEKSIFLVAHRKDPTGMDPDDIWQLSSSLKRFDDKYTLKLTFISGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 YFVMMGILTIYTSYKEKSIFLVAHRKDPTGMDPDDIWQLSSSLKRFDDKYTLKLTFISGR
130 140 150 160 170 180
170 180 190 200 210
mKIAA0 TKQQREAEFTKSIAKFFDHSGTLVMDAYEPEISRLHDSLATERKIK
:::::::::::::::::::::::::::::::::::::::: :::::
gi|109 TKQQREAEFTKSIAKFFDHSGTLVMDAYEPEISRLHDSLAIERKIK
190 200 210 220
>>gi|6648110|sp|Q15005.3|SPCS2_HUMAN RecName: Full=Signa (226 aa)
initn: 1386 init1: 1386 opt: 1386 Z-score: 1676.8 bits: 317.4 E(): 1.1e-84
Smith-Waterman score: 1386; 96.279% identity (98.605% similar) in 215 aa overlap (1-215:12-226)
10 20 30 40
mKIAA0 GGGGGSSGAGGGPSCGTSSSRSGLLDKWKIDDKPVKIDKWDGSAVKNSL
::.:: :::::. .:::.:.:::::::::::::::::::::::::::::
gi|664 MAAAAVQGGRSGGSGGCSGAGGASNCGTGSGRSGLLDKWKIDDKPVKIDKWDGSAVKNSL
10 20 30 40 50 60
50 60 70 80 90 100
mKIAA0 DDSAKKVLLEKYKYVENFGLIDGRLTICTISCFFAIVALIWDYMHPFPESKPVLALCVIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|664 DDSAKKVLLEKYKYVENFGLIDGRLTICTISCFFAIVALIWDYMHPFPESKPVLALCVIS
70 80 90 100 110 120
110 120 130 140 150 160
mKIAA0 YFVMMGILTIYTSYKEKSIFLVAHRKDPTGMDPDDIWQLSSSLKRFDDKYTLKLTFISGR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|664 YFVMMGILTIYTSYKEKSIFLVAHRKDPTGMDPDDIWQLSSSLKRFDDKYTLKLTFISGR
130 140 150 160 170 180
170 180 190 200 210
mKIAA0 TKQQREAEFTKSIAKFFDHSGTLVMDAYEPEISRLHDSLATERKIK
:::::::::::::::::::::::::::::::::::::::: :::::
gi|664 TKQQREAEFTKSIAKFFDHSGTLVMDAYEPEISRLHDSLAIERKIK
190 200 210 220
215 residues in 1 query sequences
2727779818 residues in 7921681 library sequences
Tcomplib [34.26] (2 proc)
start: Thu Mar 12 21:35:25 2009 done: Thu Mar 12 21:40:13 2009
Total Scan time: 685.040 Total Display time: 0.030
Function used was FASTA [version 34.26.5 April 26, 2007]