# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mpm06204.fasta.nr -Q ../query/mKIAA0617.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
mKIAA0617, 792 aa
vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library
2727779818 residues in 7921681 sequences
statistics sampled from 60000 to 7920409 sequences
Expectation_n fit: rho(ln(x))= 5.2333+/-0.000187; mu= 12.6892+/- 0.010
mean_var=76.5881+/-15.204, 0's: 36 Z-trim: 48 B-trim: 3123 in 1/65
Lambda= 0.146553
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 38, opt: 26, open/ext: -10/-2, width: 16
The best scores are: opt bits E(7921681)
gi|13124074|sp|Q9JLV5.1|CUL3_MOUSE RecName: Full=C ( 768) 5002 1067.6 0
gi|119888513|ref|XP_614056.3| PREDICTED: similar t ( 768) 4984 1063.8 0
gi|118095010|ref|XP_422620.2| PREDICTED: similar t ( 768) 4980 1062.9 0
gi|12643396|sp|Q13618.2|CUL3_HUMAN RecName: Full=C ( 768) 4970 1060.8 0
gi|134023875|gb|AAI35617.1| Cul3 protein [Xenopus ( 768) 4957 1058.1 0
gi|50418207|gb|AAH77239.1| Cul3-prov protein [Xeno ( 768) 4953 1057.2 0
gi|49116945|gb|AAH73186.1| MGC80402 protein [Xenop ( 768) 4942 1054.9 0
gi|119591235|gb|EAW70829.1| cullin 3, isoform CRA_ ( 766) 4941 1054.7 0
gi|190340239|gb|AAI63249.1| Cullin 3 [Danio rerio] ( 766) 4879 1041.6 0
gi|197246067|gb|AAI68969.1| Cullin 3 [Rattus norve ( 746) 4846 1034.6 0
gi|40807151|gb|AAH65357.1| Cullin 3 [Danio rerio] ( 766) 4843 1034.0 0
gi|73993846|ref|XP_534586.2| PREDICTED: similar to ( 746) 4842 1033.8 0
gi|194211375|ref|XP_001493416.2| PREDICTED: simila ( 746) 4841 1033.5 0
gi|114583658|ref|XP_001167451.1| PREDICTED: cullin ( 757) 4841 1033.5 0
gi|37682167|gb|AAQ98010.1| cullin 3 [Danio rerio] ( 766) 4841 1033.5 0
gi|149016247|gb|EDL75493.1| cullin 3 (predicted), ( 746) 4831 1031.4 0
gi|62702365|gb|AAX93287.1| unknown [Homo sapiens] ( 746) 4828 1030.8 0
gi|114583660|ref|XP_001167476.1| PREDICTED: cullin ( 774) 4828 1030.8 0
gi|114583662|ref|XP_001167503.1| PREDICTED: cullin ( 744) 4816 1028.3 0
gi|3139079|gb|AAC36682.1| cullin 3 [Homo sapiens] ( 768) 4806 1026.1 0
gi|33286088|gb|AAQ01660.1| cullin 3 isoform [Homo ( 744) 4796 1024.0 0
gi|73993854|ref|XP_860143.1| PREDICTED: similar to ( 750) 4728 1009.6 0
gi|67971438|dbj|BAE02061.1| unnamed protein produc ( 705) 4563 974.7 0
gi|73993856|ref|XP_860185.1| PREDICTED: similar to ( 696) 4422 944.9 0
gi|114583664|ref|XP_001167422.1| PREDICTED: cullin ( 704) 4408 942.0 0
gi|109101272|ref|XP_001109548.1| PREDICTED: cullin ( 653) 4222 902.6 0
gi|149502887|ref|XP_001512511.1| PREDICTED: simila ( 642) 4161 889.7 0
gi|110764722|ref|XP_625079.2| PREDICTED: similar t ( 767) 3906 835.9 0
gi|73993848|ref|XP_860035.1| PREDICTED: similar to ( 610) 3877 829.7 0
gi|91081955|ref|XP_967420.1| PREDICTED: similar to ( 771) 3876 829.5 0
gi|1381146|gb|AAC50546.1| Hs-CUL-3 ( 577) 3718 796.0 0
gi|193688102|ref|XP_001952384.1| PREDICTED: simila ( 764) 3558 762.3 0
gi|221042818|dbj|BAH13086.1| unnamed protein produ ( 550) 3541 758.6 1.5e-216
gi|73993850|ref|XP_860074.1| PREDICTED: similar to ( 723) 3488 747.5 4.4e-213
gi|73993852|ref|XP_860105.1| PREDICTED: similar to ( 726) 3485 746.8 6.9e-213
gi|7298217|gb|AAF53450.1| guftagu, isoform A [Dros ( 773) 3485 746.9 7.3e-213
gi|193913977|gb|EDW12844.1| GI22726 [Drosophila mo (1023) 3442 737.9 4.9e-210
gi|194148606|gb|EDW64304.1| GJ23288 [Drosophila vi ( 985) 3434 736.1 1.5e-209
gi|194176153|gb|EDW89764.1| GE19410 [Drosophila ya (1027) 3432 735.7 2.1e-209
gi|190660821|gb|EDV58013.1| GG24216 [Drosophila er (1027) 3432 735.7 2.1e-209
gi|194129772|gb|EDW51815.1| GM14478 [Drosophila se (1028) 3430 735.3 2.9e-209
gi|190615956|gb|EDV31480.1| GF14531 [Drosophila an ( 874) 3426 734.4 4.5e-209
gi|198139115|gb|EAL33085.2| GA16511 [Drosophila ps (1008) 3411 731.3 4.6e-208
gi|194103406|gb|EDW25449.1| GL26600 [Drosophila pe (1008) 3411 731.3 4.6e-208
gi|108876917|gb|EAT41142.1| cullin [Aedes aegypti] ( 772) 3260 699.3 1.5e-198
gi|210129815|gb|EEA77488.1| hypothetical protein B ( 753) 3205 687.6 4.7e-195
gi|194191537|gb|EDX05113.1| GD21965 [Drosophila si (1003) 2945 632.8 2.1e-178
gi|194162464|gb|EDW77365.1| GK18258 [Drosophila wi ( 775) 2940 631.6 3.5e-178
gi|156543826|ref|XP_001606614.1| PREDICTED: simila ( 774) 2922 627.8 5e-177
gi|193900394|gb|EDV99260.1| GH13125 [Drosophila gr ( 990) 2841 610.8 8.6e-172
>>gi|13124074|sp|Q9JLV5.1|CUL3_MOUSE RecName: Full=Culli (768 aa)
initn: 5002 init1: 5002 opt: 5002 Z-score: 5711.4 bits: 1067.6 E(): 0
Smith-Waterman score: 5002; 100.000% identity (100.000% similar) in 768 aa overlap (25-792:1-768)
10 20 30 40 50 60
mKIAA0 HRRLRVRAAAAAAVSAAAGEGPSTMSNLSKGTGSRKDTKMRIRAFPMTMDEKYVNSIWDL
::::::::::::::::::::::::::::::::::::
gi|131 MSNLSKGTGSRKDTKMRIRAFPMTMDEKYVNSIWDL
10 20 30
70 80 90 100 110 120
mKIAA0 LKNAIQEIQRKNNSGLSFEELYRNAYTMVLHKHGEKLYTGLREVVTEHLINKVREDVLNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|131 LKNAIQEIQRKNNSGLSFEELYRNAYTMVLHKHGEKLYTGLREVVTEHLINKVREDVLNS
40 50 60 70 80 90
130 140 150 160 170 180
mKIAA0 LNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|131 LNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGC
100 110 120 130 140 150
190 200 210 220 230 240
mKIAA0 IRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|131 IRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEF
160 170 180 190 200 210
250 260 270 280 290 300
mKIAA0 FQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|131 FQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTI
220 230 240 250 260 270
310 320 330 340 350 360
mKIAA0 VEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSCYLREQGKALVSEEGEGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|131 VEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSCYLREQGKALVSEEGEGK
280 290 300 310 320 330
370 380 390 400 410 420
mKIAA0 NPVDYIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|131 NPVDYIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKL
340 350 360 370 380 390
430 440 450 460 470 480
mKIAA0 KKGVKGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|131 KKGVKGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMIS
400 410 420 430 440 450
490 500 510 520 530 540
mKIAA0 KLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQATGVSLGGVDLTVRVLTTGYWPTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|131 KLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQATGVSLGGVDLTVRVLTTGYWPTQ
460 470 480 490 500 510
550 560 570 580 590 600
mKIAA0 SATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|131 SATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVG
520 530 540 550 560 570
610 620 630 640 650 660
mKIAA0 VGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|131 VGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLAC
580 590 600 610 620 630
670 680 690 700 710 720
mKIAA0 GKPTQRVLTKEPKSKEIESGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|131 GKPTQRVLTKEPKSKEIESGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVD
640 650 660 670 680 690
730 740 750 760 770 780
mKIAA0 DDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|131 DDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLAR
700 710 720 730 740 750
790
mKIAA0 TPEDRKVYTYVA
::::::::::::
gi|131 TPEDRKVYTYVA
760
>>gi|119888513|ref|XP_614056.3| PREDICTED: similar to Cu (768 aa)
initn: 4984 init1: 4984 opt: 4984 Z-score: 5690.8 bits: 1063.8 E(): 0
Smith-Waterman score: 4984; 99.740% identity (99.870% similar) in 768 aa overlap (25-792:1-768)
10 20 30 40 50 60
mKIAA0 HRRLRVRAAAAAAVSAAAGEGPSTMSNLSKGTGSRKDTKMRIRAFPMTMDEKYVNSIWDL
::::::::::::::::::::::::::::::::::::
gi|119 MSNLSKGTGSRKDTKMRIRAFPMTMDEKYVNSIWDL
10 20 30
70 80 90 100 110 120
mKIAA0 LKNAIQEIQRKNNSGLSFEELYRNAYTMVLHKHGEKLYTGLREVVTEHLINKVREDVLNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 LKNAIQEIQRKNNSGLSFEELYRNAYTMVLHKHGEKLYTGLREVVTEHLINKVREDVLNS
40 50 60 70 80 90
130 140 150 160 170 180
mKIAA0 LNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 LNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGC
100 110 120 130 140 150
190 200 210 220 230 240
mKIAA0 IRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 IRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEF
160 170 180 190 200 210
250 260 270 280 290 300
mKIAA0 FQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 FQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTI
220 230 240 250 260 270
310 320 330 340 350 360
mKIAA0 VEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSCYLREQGKALVSEEGEGK
:::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::
gi|119 VEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSSYLREQGKALVSEEGEGK
280 290 300 310 320 330
370 380 390 400 410 420
mKIAA0 NPVDYIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 NPVDYIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKL
340 350 360 370 380 390
430 440 450 460 470 480
mKIAA0 KKGVKGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 KKGVKGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMIS
400 410 420 430 440 450
490 500 510 520 530 540
mKIAA0 KLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQATGVSLGGVDLTVRVLTTGYWPTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 KLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQATGVSLGGVDLTVRVLTTGYWPTQ
460 470 480 490 500 510
550 560 570 580 590 600
mKIAA0 SATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 SATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVG
520 530 540 550 560 570
610 620 630 640 650 660
mKIAA0 VGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 VGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLAC
580 590 600 610 620 630
670 680 690 700 710 720
mKIAA0 GKPTQRVLTKEPKSKEIESGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVD
::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::
gi|119 GKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVD
640 650 660 670 680 690
730 740 750 760 770 780
mKIAA0 DDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 DDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLAR
700 710 720 730 740 750
790
mKIAA0 TPEDRKVYTYVA
::::::::::::
gi|119 TPEDRKVYTYVA
760
>>gi|118095010|ref|XP_422620.2| PREDICTED: similar to cu (768 aa)
initn: 4980 init1: 4980 opt: 4980 Z-score: 5686.2 bits: 1062.9 E(): 0
Smith-Waterman score: 4980; 99.609% identity (99.870% similar) in 768 aa overlap (25-792:1-768)
10 20 30 40 50 60
mKIAA0 HRRLRVRAAAAAAVSAAAGEGPSTMSNLSKGTGSRKDTKMRIRAFPMTMDEKYVNSIWDL
::::::::::::::::::::::::::::::::::::
gi|118 MSNLSKGTGSRKDTKMRIRAFPMTMDEKYVNSIWDL
10 20 30
70 80 90 100 110 120
mKIAA0 LKNAIQEIQRKNNSGLSFEELYRNAYTMVLHKHGEKLYTGLREVVTEHLINKVREDVLNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|118 LKNAIQEIQRKNNSGLSFEELYRNAYTMVLHKHGEKLYTGLREVVTEHLINKVREDVLNS
40 50 60 70 80 90
130 140 150 160 170 180
mKIAA0 LNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|118 LNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGC
100 110 120 130 140 150
190 200 210 220 230 240
mKIAA0 IRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|118 IRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEF
160 170 180 190 200 210
250 260 270 280 290 300
mKIAA0 FQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|118 FQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTI
220 230 240 250 260 270
310 320 330 340 350 360
mKIAA0 VEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSCYLREQGKALVSEEGEGK
:::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::
gi|118 VEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSSYLREQGKALVSEEGEGK
280 290 300 310 320 330
370 380 390 400 410 420
mKIAA0 NPVDYIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|118 NPVDYIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKL
340 350 360 370 380 390
430 440 450 460 470 480
mKIAA0 KKGVKGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|118 KKGVKGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMIS
400 410 420 430 440 450
490 500 510 520 530 540
mKIAA0 KLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQATGVSLGGVDLTVRVLTTGYWPTQ
::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::
gi|118 KLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQSTGVSLGGVDLTVRVLTTGYWPTQ
460 470 480 490 500 510
550 560 570 580 590 600
mKIAA0 SATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|118 SATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVG
520 530 540 550 560 570
610 620 630 640 650 660
mKIAA0 VGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|118 VGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLAC
580 590 600 610 620 630
670 680 690 700 710 720
mKIAA0 GKPTQRVLTKEPKSKEIESGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVD
::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::
gi|118 GKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVD
640 650 660 670 680 690
730 740 750 760 770 780
mKIAA0 DDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|118 DDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLAR
700 710 720 730 740 750
790
mKIAA0 TPEDRKVYTYVA
::::::::::::
gi|118 TPEDRKVYTYVA
760
>>gi|12643396|sp|Q13618.2|CUL3_HUMAN RecName: Full=Culli (768 aa)
initn: 4970 init1: 4970 opt: 4970 Z-score: 5674.8 bits: 1060.8 E(): 0
Smith-Waterman score: 4970; 99.479% identity (99.740% similar) in 768 aa overlap (25-792:1-768)
10 20 30 40 50 60
mKIAA0 HRRLRVRAAAAAAVSAAAGEGPSTMSNLSKGTGSRKDTKMRIRAFPMTMDEKYVNSIWDL
::::::::::::::::::::::::::::::::::::
gi|126 MSNLSKGTGSRKDTKMRIRAFPMTMDEKYVNSIWDL
10 20 30
70 80 90 100 110 120
mKIAA0 LKNAIQEIQRKNNSGLSFEELYRNAYTMVLHKHGEKLYTGLREVVTEHLINKVREDVLNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|126 LKNAIQEIQRKNNSGLSFEELYRNAYTMVLHKHGEKLYTGLREVVTEHLINKVREDVLNS
40 50 60 70 80 90
130 140 150 160 170 180
mKIAA0 LNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|126 LNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGC
100 110 120 130 140 150
190 200 210 220 230 240
mKIAA0 IRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|126 IRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEF
160 170 180 190 200 210
250 260 270 280 290 300
mKIAA0 FQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|126 FQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTI
220 230 240 250 260 270
310 320 330 340 350 360
mKIAA0 VEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSCYLREQGKALVSEEGEGK
::::::::::::::::::::.::::::::::::::::::::: :::::::::::::::::
gi|126 VEMENSGLVHMLKNGKTEDLGCMYKLFSRVPNGLKTMCECMSSYLREQGKALVSEEGEGK
280 290 300 310 320 330
370 380 390 400 410 420
mKIAA0 NPVDYIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKL
:::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::
gi|126 NPVDYIQGLLDLKSRFDRFLLESFNNDRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKL
340 350 360 370 380 390
430 440 450 460 470 480
mKIAA0 KKGVKGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|126 KKGVKGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMIS
400 410 420 430 440 450
490 500 510 520 530 540
mKIAA0 KLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQATGVSLGGVDLTVRVLTTGYWPTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|126 KLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQATGVSLGGVDLTVRVLTTGYWPTQ
460 470 480 490 500 510
550 560 570 580 590 600
mKIAA0 SATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|126 SATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVG
520 530 540 550 560 570
610 620 630 640 650 660
mKIAA0 VGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|126 VGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLAC
580 590 600 610 620 630
670 680 690 700 710 720
mKIAA0 GKPTQRVLTKEPKSKEIESGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVD
::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::
gi|126 GKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVD
640 650 660 670 680 690
730 740 750 760 770 780
mKIAA0 DDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|126 DDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLAR
700 710 720 730 740 750
790
mKIAA0 TPEDRKVYTYVA
::::::::::::
gi|126 TPEDRKVYTYVA
760
>>gi|134023875|gb|AAI35617.1| Cul3 protein [Xenopus trop (768 aa)
initn: 4957 init1: 4957 opt: 4957 Z-score: 5660.0 bits: 1058.1 E(): 0
Smith-Waterman score: 4957; 99.089% identity (99.870% similar) in 768 aa overlap (25-792:1-768)
10 20 30 40 50 60
mKIAA0 HRRLRVRAAAAAAVSAAAGEGPSTMSNLSKGTGSRKDTKMRIRAFPMTMDEKYVNSIWDL
::::.:.:::::::::::::::::::::::::::::
gi|134 MSNLGKSTGSRKDTKMRIRAFPMTMDEKYVNSIWDL
10 20 30
70 80 90 100 110 120
mKIAA0 LKNAIQEIQRKNNSGLSFEELYRNAYTMVLHKHGEKLYTGLREVVTEHLINKVREDVLNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|134 LKNAIQEIQRKNNSGLSFEELYRNAYTMVLHKHGEKLYTGLREVVTEHLINKVREDVLNS
40 50 60 70 80 90
130 140 150 160 170 180
mKIAA0 LNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|134 LNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGC
100 110 120 130 140 150
190 200 210 220 230 240
mKIAA0 IRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|134 IRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEF
160 170 180 190 200 210
250 260 270 280 290 300
mKIAA0 FQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|134 FQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTI
220 230 240 250 260 270
310 320 330 340 350 360
mKIAA0 VEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSCYLREQGKALVSEEGEGK
:::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::
gi|134 VEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSLYLREQGKALVSEEGEGK
280 290 300 310 320 330
370 380 390 400 410 420
mKIAA0 NPVDYIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKL
::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::
gi|134 NPVDYIQGLLDLKSRFDRFLQESFSNDRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKL
340 350 360 370 380 390
430 440 450 460 470 480
mKIAA0 KKGVKGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMIS
:::::::::::::.::::::::::::::::::::::::::::::::::::::::::::::
gi|134 KKGVKGLTEQEVESILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMIS
400 410 420 430 440 450
490 500 510 520 530 540
mKIAA0 KLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQATGVSLGGVDLTVRVLTTGYWPTQ
::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::
gi|134 KLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQTTGVSLGGVDLTVRVLTTGYWPTQ
460 470 480 490 500 510
550 560 570 580 590 600
mKIAA0 SATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|134 SATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVG
520 530 540 550 560 570
610 620 630 640 650 660
mKIAA0 VGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|134 VGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLAC
580 590 600 610 620 630
670 680 690 700 710 720
mKIAA0 GKPTQRVLTKEPKSKEIESGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVD
:::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::
gi|134 GKPTQRVLTKEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVD
640 650 660 670 680 690
730 740 750 760 770 780
mKIAA0 DDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|134 DDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLAR
700 710 720 730 740 750
790
mKIAA0 TPEDRKVYTYVA
::::::::::::
gi|134 TPEDRKVYTYVA
760
>>gi|50418207|gb|AAH77239.1| Cul3-prov protein [Xenopus (768 aa)
initn: 4953 init1: 4953 opt: 4953 Z-score: 5655.4 bits: 1057.2 E(): 0
Smith-Waterman score: 4953; 98.958% identity (99.870% similar) in 768 aa overlap (25-792:1-768)
10 20 30 40 50 60
mKIAA0 HRRLRVRAAAAAAVSAAAGEGPSTMSNLSKGTGSRKDTKMRIRAFPMTMDEKYVNSIWDL
::::.:.:::::::::::::::::::::::::::::
gi|504 MSNLGKSTGSRKDTKMRIRAFPMTMDEKYVNSIWDL
10 20 30
70 80 90 100 110 120
mKIAA0 LKNAIQEIQRKNNSGLSFEELYRNAYTMVLHKHGEKLYTGLREVVTEHLINKVREDVLNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|504 LKNAIQEIQRKNNSGLSFEELYRNAYTMVLHKHGEKLYTGLREVVTEHLINKVREDVLNS
40 50 60 70 80 90
130 140 150 160 170 180
mKIAA0 LNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|504 LNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGC
100 110 120 130 140 150
190 200 210 220 230 240
mKIAA0 IRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|504 IRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEF
160 170 180 190 200 210
250 260 270 280 290 300
mKIAA0 FQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|504 FQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTI
220 230 240 250 260 270
310 320 330 340 350 360
mKIAA0 VEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSCYLREQGKALVSEEGEGK
:::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::
gi|504 VEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSLYLREQGKALVSEEGEGK
280 290 300 310 320 330
370 380 390 400 410 420
mKIAA0 NPVDYIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKL
::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::
gi|504 NPVDYIQGLLDLKSRFDRFLQESFSNDRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKL
340 350 360 370 380 390
430 440 450 460 470 480
mKIAA0 KKGVKGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMIS
:::::::::::::.::::::::::::::::::::::::::::::::::::::::::::::
gi|504 KKGVKGLTEQEVESILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMIS
400 410 420 430 440 450
490 500 510 520 530 540
mKIAA0 KLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQATGVSLGGVDLTVRVLTTGYWPTQ
::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::
gi|504 KLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQTTGVSLGGVDLTVRVLTTGYWPTQ
460 470 480 490 500 510
550 560 570 580 590 600
mKIAA0 SATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|504 SATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVG
520 530 540 550 560 570
610 620 630 640 650 660
mKIAA0 VGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLAC
::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::
gi|504 VGGAQVTGSNTRKHILQVSTFQMTILMLFNNRDKYTFEEIQQETDIPERELVRALQSLAC
580 590 600 610 620 630
670 680 690 700 710 720
mKIAA0 GKPTQRVLTKEPKSKEIESGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVD
:::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::
gi|504 GKPTQRVLTKEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVD
640 650 660 670 680 690
730 740 750 760 770 780
mKIAA0 DDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|504 DDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLAR
700 710 720 730 740 750
790
mKIAA0 TPEDRKVYTYVA
::::::::::::
gi|504 TPEDRKVYTYVA
760
>>gi|49116945|gb|AAH73186.1| MGC80402 protein [Xenopus l (768 aa)
initn: 4942 init1: 4942 opt: 4942 Z-score: 5642.8 bits: 1054.9 E(): 0
Smith-Waterman score: 4942; 98.828% identity (99.740% similar) in 768 aa overlap (25-792:1-768)
10 20 30 40 50 60
mKIAA0 HRRLRVRAAAAAAVSAAAGEGPSTMSNLSKGTGSRKDTKMRIRAFPMTMDEKYVNSIWDL
::::.:.:::::::::::::::::::::::::::::
gi|491 MSNLGKSTGSRKDTKMRIRAFPMTMDEKYVNSIWDL
10 20 30
70 80 90 100 110 120
mKIAA0 LKNAIQEIQRKNNSGLSFEELYRNAYTMVLHKHGEKLYTGLREVVTEHLINKVREDVLNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|491 LKNAIQEIQRKNNSGLSFEELYRNAYTMVLHKHGEKLYTGLREVVTEHLINKVREDVLNS
40 50 60 70 80 90
130 140 150 160 170 180
mKIAA0 LNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|491 LNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGC
100 110 120 130 140 150
190 200 210 220 230 240
mKIAA0 IRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|491 IRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEF
160 170 180 190 200 210
250 260 270 280 290 300
mKIAA0 FQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|491 FQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTI
220 230 240 250 260 270
310 320 330 340 350 360
mKIAA0 VEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSCYLREQGKALVSEEGEGK
:::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::
gi|491 VEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSLYLREQGKALVSEEGEGK
280 290 300 310 320 330
370 380 390 400 410 420
mKIAA0 NPVDYIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKL
::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::
gi|491 NPVDYIQGLLDLKSRFDRFLQESFSNDRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKL
340 350 360 370 380 390
430 440 450 460 470 480
mKIAA0 KKGVKGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMIS
:::::::::::::.::::::::::::::::::::::::::::::::::::::::::::::
gi|491 KKGVKGLTEQEVESILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMIS
400 410 420 430 440 450
490 500 510 520 530 540
mKIAA0 KLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQATGVSLGGVDLTVRVLTTGYWPTQ
::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::
gi|491 KLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQTTGVSLGGVDLTVRVLTTGYWPTQ
460 470 480 490 500 510
550 560 570 580 590 600
mKIAA0 SATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVG
::::::::::.:::::::::::::::::::::::::::::::::::::: ::::::::::
gi|491 SATPKCNIPPSPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGAVKKEDGSEVG
520 530 540 550 560 570
610 620 630 640 650 660
mKIAA0 VGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|491 VGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLAC
580 590 600 610 620 630
670 680 690 700 710 720
mKIAA0 GKPTQRVLTKEPKSKEIESGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVD
:::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::
gi|491 GKPTQRVLTKEPKSKEIESGHMFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVD
640 650 660 670 680 690
730 740 750 760 770 780
mKIAA0 DDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|491 DDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLAR
700 710 720 730 740 750
790
mKIAA0 TPEDRKVYTYVA
::::::::::::
gi|491 TPEDRKVYTYVA
760
>>gi|119591235|gb|EAW70829.1| cullin 3, isoform CRA_b [H (766 aa)
initn: 4941 init1: 3794 opt: 4941 Z-score: 5641.7 bits: 1054.7 E(): 0
Smith-Waterman score: 4941; 99.219% identity (99.479% similar) in 768 aa overlap (25-792:1-766)
10 20 30 40 50 60
mKIAA0 HRRLRVRAAAAAAVSAAAGEGPSTMSNLSKGTGSRKDTKMRIRAFPMTMDEKYVNSIWDL
::::::::::::::::::::::::::::::::::::
gi|119 MSNLSKGTGSRKDTKMRIRAFPMTMDEKYVNSIWDL
10 20 30
70 80 90 100 110 120
mKIAA0 LKNAIQEIQRKNNSGLSFEELYRNAYTMVLHKHGEKLYTGLREVVTEHLINKVREDVLNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 LKNAIQEIQRKNNSGLSFEELYRNAYTMVLHKHGEKLYTGLREVVTEHLINKVREDVLNS
40 50 60 70 80 90
130 140 150 160 170 180
mKIAA0 LNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 LNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGC
100 110 120 130 140 150
190 200 210 220 230 240
mKIAA0 IRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEF
:::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::
gi|119 IRDHLRQTLLDMIARERKGEVV--GAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEF
160 170 180 190 200 210
250 260 270 280 290 300
mKIAA0 FQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 FQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTI
220 230 240 250 260 270
310 320 330 340 350 360
mKIAA0 VEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSCYLREQGKALVSEEGEGK
::::::::::::::::::::.::::::::::::::::::::: :::::::::::::::::
gi|119 VEMENSGLVHMLKNGKTEDLGCMYKLFSRVPNGLKTMCECMSSYLREQGKALVSEEGEGK
280 290 300 310 320 330
370 380 390 400 410 420
mKIAA0 NPVDYIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKL
:::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::
gi|119 NPVDYIQGLLDLKSRFDRFLLESFNNDRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKL
340 350 360 370 380 390
430 440 450 460 470 480
mKIAA0 KKGVKGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMIS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 KKGVKGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMIS
400 410 420 430 440 450
490 500 510 520 530 540
mKIAA0 KLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQATGVSLGGVDLTVRVLTTGYWPTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 KLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQATGVSLGGVDLTVRVLTTGYWPTQ
460 470 480 490 500 510
550 560 570 580 590 600
mKIAA0 SATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 SATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVG
520 530 540 550 560 570
610 620 630 640 650 660
mKIAA0 VGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLAC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 VGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLAC
580 590 600 610 620 630
670 680 690 700 710 720
mKIAA0 GKPTQRVLTKEPKSKEIESGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVD
::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::
gi|119 GKPTQRVLTKEPKSKEIENGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVD
640 650 660 670 680 690
730 740 750 760 770 780
mKIAA0 DDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 DDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLAR
700 710 720 730 740 750
790
mKIAA0 TPEDRKVYTYVA
::::::::::::
gi|119 TPEDRKVYTYVA
760
>>gi|190340239|gb|AAI63249.1| Cullin 3 [Danio rerio] (766 aa)
initn: 4875 init1: 3665 opt: 4879 Z-score: 5570.9 bits: 1041.6 E(): 0
Smith-Waterman score: 4879; 97.266% identity (99.219% similar) in 768 aa overlap (25-792:1-766)
10 20 30 40 50 60
mKIAA0 HRRLRVRAAAAAAVSAAAGEGPSTMSNLSKGTGSRKDTKMRIRAFPMTMDEKYVNSIWDL
::::::: :..::::::::::::::::::::.::::
gi|190 MSNLSKG-GTKKDTKMRIRAFPMTMDEKYVNNIWDL
10 20 30
70 80 90 100 110 120
mKIAA0 LKNAIQEIQRKNNSGLSFEELYRNAYTMVLHKHGEKLYTGLREVVTEHLINKVREDVLNS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|190 LKNAIQEIQRKNNSGLSFEELYRNAYTMVLHKHGEKLYTGLREVVTEHLINKVREDVLNS
40 50 60 70 80 90
130 140 150 160 170 180
mKIAA0 LNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|190 LNNNFLQTLNQAWNDHQTAMVMIRDILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGC
100 110 120 130 140 150
190 200 210 220 230 240
mKIAA0 IRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|190 IRDHLRQTLLDMIARERKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEF
160 170 180 190 200 210
250 260 270 280 290 300
mKIAA0 FQMESQKFLAENSASVYIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTI
::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::
gi|190 FQMESQKFLAENSASVYIKKVEARINEEIERVIHCLDKSTEEPIVKVVERELISKHMKTI
220 230 240 250 260 270
310 320 330 340 350 360
mKIAA0 VEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSCYLREQGKALVSEEGEGK
:::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::
gi|190 VEMENSGLVHMLKNGKTEDLACMYKLFSRVPNGLKTMCECMSSYLREQGKALVSEEGEGK
280 290 300 310 320 330
370 380 390 400 410 420
mKIAA0 NPVDYIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|190 NPVDYIQGLLDLKSRFDRFLQESFNNDRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKL
340 350 360 370 380 390
430 440 450 460 470 480
mKIAA0 KKGVKGLTEQEVETILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMIS
:::::::::::::.::::::::::::::::::::::::::::::::::::::::::::::
gi|190 KKGVKGLTEQEVESILDKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMIS
400 410 420 430 440 450
490 500 510 520 530 540
mKIAA0 KLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLQATGVSLGGVDLTVRVLTTGYWPTQ
::::::::::::::::::::::::::::::::::: .:::::::::: ::::::::::::
gi|190 KLKTECGCQFTSKLEGMFRDMSISNTTMDEFRQHLTSTGVSLGGVDLIVRVLTTGYWPTQ
460 470 480 490 500 510
550 560 570 580 590 600
mKIAA0 SATPKCNIPPAPRHAFEIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVG
::::::::::.::::::.::::::::::::::::::::::::::::::::.::::::..
gi|190 SATPKCNIPPSPRHAFEVFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPIKKEDGSDM-
520 530 540 550 560 570
610 620 630 640 650 660
mKIAA0 VGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLAC
:::::::::::::::::::::::::::::::::: :::::::::::::::::::::::::
gi|190 VGGAQVTGSNTRKHILQVSTFQMTILMLFNNREKSTFEEIQQETDIPERELVRALQSLAC
580 590 600 610 620 630
670 680 690 700 710 720
mKIAA0 GKPTQRVLTKEPKSKEIESGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVD
::::::::::::::::::.::.:::::::::.::::::::::::::::::::::::::::
gi|190 GKPTQRVLTKEPKSKEIENGHVFTVNDQFTSRLHRVKIQTVAAKQGESDPERKETRQKVD
640 650 660 670 680 690
730 740 750 760 770 780
mKIAA0 DDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLAR
::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::
gi|190 DDRKHEIEAAIVRIMKSRKKMQHNVLVAEVTQQLRARFLPSPVVIKKRIEGLIEREYLAR
700 710 720 730 740 750
790
mKIAA0 TPEDRKVYTYVA
::::::::::::
gi|190 TPEDRKVYTYVA
760
>>gi|197246067|gb|AAI68969.1| Cullin 3 [Rattus norvegicu (746 aa)
initn: 4846 init1: 4846 opt: 4846 Z-score: 5533.3 bits: 1034.6 E(): 0
Smith-Waterman score: 4846; 99.866% identity (99.866% similar) in 746 aa overlap (47-792:1-746)
20 30 40 50 60 70
mKIAA0 AAGEGPSTMSNLSKGTGSRKDTKMRIRAFPMTMDEKYVNSIWDLLKNAIQEIQRKNNSGL
::::::::::::::::::::::::::::::
gi|197 MTMDEKYVNSIWDLLKNAIQEIQRKNNSGL
10 20 30
80 90 100 110 120 130
mKIAA0 SFEELYRNAYTMVLHKHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|197 SFEELYRNAYTMVLHKHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDH
40 50 60 70 80 90
140 150 160 170 180 190
mKIAA0 QTAMVMIRDILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|197 QTAMVMIRDILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARE
100 110 120 130 140 150
200 210 220 230 240 250
mKIAA0 RKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|197 RKGEVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASV
160 170 180 190 200 210
260 270 280 290 300 310
mKIAA0 YIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|197 YIKKVEARINEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGK
220 230 240 250 260 270
320 330 340 350 360 370
mKIAA0 TEDLACMYKLFSRVPNGLKTMCECMSCYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRF
:::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::
gi|197 TEDLACMYKLFSRVPNGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKSRF
280 290 300 310 320 330
380 390 400 410 420 430
mKIAA0 DRFLQESFNNDRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVETIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|197 DRFLQESFNNDRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVETIL
340 350 360 370 380 390
440 450 460 470 480 490
mKIAA0 DKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|197 DKAMVLFRFMQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEG
400 410 420 430 440 450
500 510 520 530 540 550
mKIAA0 MFRDMSISNTTMDEFRQHLQATGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|197 MFRDMSISNTTMDEFRQHLQATGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPAPRHAF
460 470 480 490 500 510
560 570 580 590 600 610
mKIAA0 EIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTRKHIL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|197 EIFRRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTRKHIL
520 530 540 550 560 570
620 630 640 650 660 670
mKIAA0 QVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|197 QVSTFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKE
580 590 600 610 620 630
680 690 700 710 720 730
mKIAA0 IESGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|197 IESGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMK
640 650 660 670 680 690
740 750 760 770 780 790
mKIAA0 SRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|197 SRKKMQHNVLVAEVTQQLKARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA
700 710 720 730 740
792 residues in 1 query sequences
2727779818 residues in 7921681 library sequences
Tcomplib [34.26] (2 proc)
start: Sun Mar 15 12:30:43 2009 done: Sun Mar 15 12:38:58 2009
Total Scan time: 1086.910 Total Display time: 0.350
Function used was FASTA [version 34.26.5 April 26, 2007]