# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mpm06087.fasta.nr -Q ../query/mKIAA1286.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1286, 649 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7913993 sequences Expectation_n fit: rho(ln(x))= 6.1029+/-0.000197; mu= 8.9973+/- 0.011 mean_var=111.7539+/-21.102, 0's: 39 Z-trim: 63 B-trim: 0 in 0/66 Lambda= 0.121323 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|187465752|emb|CAQ51742.1| bromodomain and PHD f (1204) 4346 771.9 0 gi|148690644|gb|EDL22591.1| mCG18535 [Mus musculus (1199) 4300 763.9 0 gi|149043488|gb|EDL96939.1| bromodomain and PHD fi (1199) 4078 725.0 3.4e-206 gi|71153496|sp|Q9ULD4.2|BRPF3_HUMAN RecName: Full= (1205) 3960 704.4 5.6e-200 gi|168273214|dbj|BAG10446.1| bromodomain and PHD f (1205) 3955 703.5 1e-199 gi|114607125|ref|XP_518433.2| PREDICTED: bromodoma (1205) 3941 701.1 5.7e-199 gi|194677587|ref|XP_584708.4| PREDICTED: similar t (1207) 3930 699.1 2.2e-198 gi|73972700|ref|XP_538883.2| PREDICTED: similar to (1319) 3929 699.0 2.6e-198 gi|119624285|gb|EAX03880.1| bromodomain and PHD fi (1204) 3927 698.6 3.1e-198 gi|194223447|ref|XP_001918146.1| PREDICTED: bromod (1206) 3904 694.6 5e-197 gi|126309915|ref|XP_001378780.1| PREDICTED: simila (1184) 3518 627.0 1.1e-176 gi|194040396|ref|XP_001927497.1| PREDICTED: bromod (1065) 3370 601.1 6.3e-169 gi|114607133|ref|XP_001172802.1| PREDICTED: bromod (1004) 2961 529.5 2.1e-147 gi|149465920|ref|XP_001518528.1| PREDICTED: simila (1059) 2745 491.7 5.3e-136 gi|18676944|dbj|BAB85060.1| unnamed protein produc ( 424) 2445 438.8 1.7e-120 gi|189522204|ref|XP_001919047.1| PREDICTED: novel (1224) 2245 404.2 1.3e-109 gi|189525230|ref|XP_001922198.1| PREDICTED: simila (1213) 1992 359.9 2.8e-96 gi|118102292|ref|XP_419262.2| PREDICTED: similar t (1174) 1923 347.8 1.2e-92 gi|224093460|ref|XP_002187986.1| PREDICTED: bromod (1186) 1797 325.8 5.2e-86 gi|126338672|ref|XP_001363159.1| PREDICTED: simila (1185) 1759 319.1 5.2e-84 gi|112418528|gb|AAI21943.1| Bromodomain containing (1185) 1741 316.0 4.6e-83 gi|47213506|emb|CAF96088.1| unnamed protein produc (1198) 1740 315.8 5.3e-83 gi|224085193|ref|XP_002196597.1| PREDICTED: bromod (1118) 1723 312.8 3.9e-82 gi|47205952|emb|CAF90865.1| unnamed protein produc ( 744) 1629 296.2 2.6e-77 gi|28277047|gb|AAH46521.1| Bromodomain and PHD fin (1246) 1607 292.5 5.5e-76 gi|74224125|dbj|BAE33691.1| unnamed protein produc (1247) 1602 291.7 1e-75 gi|119584378|gb|EAW63974.1| bromodomain and PHD fi (1247) 1588 289.2 5.5e-75 gi|21619522|gb|AAH31594.1| Brpf1 protein [Mus musc ( 957) 1585 288.6 6.5e-75 gi|73984723|ref|XP_861841.1| PREDICTED: similar to (1247) 1573 286.6 3.4e-74 gi|169154412|emb|CAQ15286.1| novel protein similar ( 585) 1564 284.7 5.8e-74 gi|73984719|ref|XP_541782.2| PREDICTED: similar to (1253) 1551 282.7 4.9e-73 gi|219521531|gb|AAI43919.1| Unknown (protein for M ( 871) 1517 276.7 2.3e-71 gi|73968869|ref|XP_856168.1| PREDICTED: similar to (1187) 1516 276.6 3.3e-71 gi|197245583|gb|AAI68469.1| LOC779492 protein [Xen ( 983) 1490 272.0 6.8e-70 gi|109659078|gb|AAI17388.1| BRPF3 protein [Homo sa ( 935) 1487 271.4 9.4e-70 gi|114607131|ref|XP_001172809.1| PREDICTED: bromod ( 935) 1482 270.6 1.7e-69 gi|118082142|ref|XP_415977.2| PREDICTED: similar t (1058) 1383 253.3 3.1e-64 gi|224093462|ref|XP_002188050.1| PREDICTED: bromod (1058) 1377 252.2 6.4e-64 gi|126338670|ref|XP_001363073.1| PREDICTED: simila (1056) 1370 251.0 1.5e-63 gi|73968873|ref|XP_848502.1| PREDICTED: similar to (1189) 1361 249.5 4.9e-63 gi|149633033|ref|XP_001505961.1| PREDICTED: simila (1089) 1348 247.2 2.2e-62 gi|164698417|ref|NP_001028446.2| bromodomain conta (1189) 1339 245.6 7e-62 gi|114687003|ref|XP_001139344.1| PREDICTED: bromod (1189) 1334 244.7 1.3e-61 gi|119624286|gb|EAX03881.1| bromodomain and PHD fi ( 878) 1331 244.1 1.5e-61 gi|221044970|dbj|BAH14162.1| unnamed protein produ ( 784) 1330 243.9 1.5e-61 gi|119593879|gb|EAW73473.1| bromodomain containing (1189) 1332 244.4 1.6e-61 gi|28704033|gb|AAH47508.1| BRD1 protein [Homo sapi (1189) 1332 244.4 1.6e-61 gi|109094585|ref|XP_001111383.1| PREDICTED: simila (1190) 1325 243.2 3.8e-61 gi|109094589|ref|XP_001111274.1| PREDICTED: simila (1231) 1325 243.2 3.9e-61 gi|119624282|gb|EAX03877.1| bromodomain and PHD fi ( 453) 1316 241.2 5.6e-61 >>gi|187465752|emb|CAQ51742.1| bromodomain and PHD finge (1204 aa) initn: 4346 init1: 4346 opt: 4346 Z-score: 4111.6 bits: 771.9 E(): 0 Smith-Waterman score: 4346; 100.000% identity (100.000% similar) in 649 aa overlap (1-649:496-1144) 10 20 30 mKIAA1 TQFMQRLHNYWLLKRQARNGVPLIRRLHSH :::::::::::::::::::::::::::::: gi|187 PSITLPMVTVPQIPSYRLNKICSGLSFQRKTQFMQRLHNYWLLKRQARNGVPLIRRLHSH 470 480 490 500 510 520 40 50 60 70 80 90 mKIAA1 LQSQRNAEQREQDEKTSAVKEELKYWQKLRHDLERARLLIELIRKREKLKREQVKVQQAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 LQSQRNAEQREQDEKTSAVKEELKYWQKLRHDLERARLLIELIRKREKLKREQVKVQQAA 530 540 550 560 570 580 100 110 120 130 140 150 mKIAA1 MELELMPFTVLLRTTLDLLQEKDSAHIFAEPVSLSEVPDYLEFISKPMDFSTMRRKLESH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 MELELMPFTVLLRTTLDLLQEKDSAHIFAEPVSLSEVPDYLEFISKPMDFSTMRRKLESH 590 600 610 620 630 640 160 170 180 190 200 210 mKIAA1 LYHTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVRLRDLGGAILRHARRQAENIGYDPER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 LYHTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVRLRDLGGAILRHARRQAENIGYDPER 650 660 670 680 690 700 220 230 240 250 260 270 mKIAA1 GTHLPESPRLEDFYRFSWEDVDNILIPENRAHLSPEAQLKELLEKLDLVSTMRSSGARTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 GTHLPESPRLEDFYRFSWEDVDNILIPENRAHLSPEAQLKELLEKLDLVSTMRSSGARTR 710 720 730 740 750 760 280 290 300 310 320 330 mKIAA1 RVRMLRREINALRQKLAQPPPPQLLSLNKTVPNGELPAGSRGDTAVLEQAQQEEPEEEGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 RVRMLRREINALRQKLAQPPPPQLLSLNKTVPNGELPAGSRGDTAVLEQAQQEEPEEEGD 770 780 790 800 810 820 340 350 360 370 380 390 mKIAA1 RDDSKLPAPPTLEPTGPAPSLSEQESPPDPPTLKPISDSKPSSRFLKSRKVEDEELLEKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 RDDSKLPAPPTLEPTGPAPSLSEQESPPDPPTLKPISDSKPSSRFLKSRKVEDEELLEKS 830 840 850 860 870 880 400 410 420 430 440 450 mKIAA1 ALQLGSEPLQCLLSDNGIDRLSLTNPDSHPDTPLGTVGRRTSVLFKKAKNGVKLQRGPDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 ALQLGSEPLQCLLSDNGIDRLSLTNPDSHPDTPLGTVGRRTSVLFKKAKNGVKLQRGPDG 890 900 910 920 930 940 460 470 480 490 500 510 mKIAA1 TLENGEDHGPEDDPASPASTEDEHYSRKRPRSRSCSDSEGERSPQQEEETGVTNGFGKHT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 TLENGEDHGPEDDPASPASTEDEHYSRKRPRSRSCSDSEGERSPQQEEETGVTNGFGKHT 950 960 970 980 990 1000 520 530 540 550 560 570 mKIAA1 ESGSDSECSLGLSGGLAFEAGSGLTPPKRSRGKPALSRVPFLEGVNGDSDHSGSGRSLLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 ESGSDSECSLGLSGGLAFEAGSGLTPPKRSRGKPALSRVPFLEGVNGDSDHSGSGRSLLM 1010 1020 1030 1040 1050 1060 580 590 600 610 620 630 mKIAA1 PFEDHGDLEPLELVWAKCRGYPSYPALIIDPKMPREGLLHNGVPIPVPPLDVLKLGEQKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 PFEDHGDLEPLELVWAKCRGYPSYPALIIDPKMPREGLLHNGVPIPVPPLDVLKLGEQKQ 1070 1080 1090 1100 1110 1120 640 mKIAA1 AEAGERLFLVLFFDNKRTW ::::::::::::::::::: gi|187 AEAGERLFLVLFFDNKRTWQWLPRDKVLPLGVEDTVDKLKMLEGRKTSIRKSVQVAYDRA 1130 1140 1150 1160 1170 1180 >>gi|148690644|gb|EDL22591.1| mCG18535 [Mus musculus] (1199 aa) initn: 3538 init1: 3538 opt: 4300 Z-score: 4068.2 bits: 763.9 E(): 0 Smith-Waterman score: 4300; 99.230% identity (99.230% similar) in 649 aa overlap (1-649:496-1139) 10 20 30 mKIAA1 TQFMQRLHNYWLLKRQARNGVPLIRRLHSH :::::::::::::::::::::::::::::: gi|148 PSITLPMVTVPQIPSYRLNKICSGLSFQRKTQFMQRLHNYWLLKRQARNGVPLIRRLHSH 470 480 490 500 510 520 40 50 60 70 80 90 mKIAA1 LQSQRNAEQREQDEKTSAVKEELKYWQKLRHDLERARLLIELIRKREKLKREQVKVQQAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LQSQRNAEQREQDEKTSAVKEELKYWQKLRHDLERARLLIELIRKREKLKREQVKVQQAA 530 540 550 560 570 580 100 110 120 130 140 150 mKIAA1 MELELMPFTVLLRTTLDLLQEKDSAHIFAEPVSLSEVPDYLEFISKPMDFSTMRRKLESH ::::::::::::::::::::::::::::::: :::::::::::::::::::::::: gi|148 MELELMPFTVLLRTTLDLLQEKDSAHIFAEP-----VPDYLEFISKPMDFSTMRRKLESH 590 600 610 620 630 640 160 170 180 190 200 210 mKIAA1 LYHTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVRLRDLGGAILRHARRQAENIGYDPER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 LYHTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVRLRDLGGAILRHARRQAENIGYDPER 650 660 670 680 690 700 220 230 240 250 260 270 mKIAA1 GTHLPESPRLEDFYRFSWEDVDNILIPENRAHLSPEAQLKELLEKLDLVSTMRSSGARTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GTHLPESPRLEDFYRFSWEDVDNILIPENRAHLSPEAQLKELLEKLDLVSTMRSSGARTR 710 720 730 740 750 760 280 290 300 310 320 330 mKIAA1 RVRMLRREINALRQKLAQPPPPQLLSLNKTVPNGELPAGSRGDTAVLEQAQQEEPEEEGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RVRMLRREINALRQKLAQPPPPQLLSLNKTVPNGELPAGSRGDTAVLEQAQQEEPEEEGD 770 780 790 800 810 820 340 350 360 370 380 390 mKIAA1 RDDSKLPAPPTLEPTGPAPSLSEQESPPDPPTLKPISDSKPSSRFLKSRKVEDEELLEKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RDDSKLPAPPTLEPTGPAPSLSEQESPPDPPTLKPISDSKPSSRFLKSRKVEDEELLEKS 830 840 850 860 870 880 400 410 420 430 440 450 mKIAA1 ALQLGSEPLQCLLSDNGIDRLSLTNPDSHPDTPLGTVGRRTSVLFKKAKNGVKLQRGPDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ALQLGSEPLQCLLSDNGIDRLSLTNPDSHPDTPLGTVGRRTSVLFKKAKNGVKLQRGPDG 890 900 910 920 930 940 460 470 480 490 500 510 mKIAA1 TLENGEDHGPEDDPASPASTEDEHYSRKRPRSRSCSDSEGERSPQQEEETGVTNGFGKHT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 TLENGEDHGPEDDPASPASTEDEHYSRKRPRSRSCSDSEGERSPQQEEETGVTNGFGKHT 950 960 970 980 990 1000 520 530 540 550 560 570 mKIAA1 ESGSDSECSLGLSGGLAFEAGSGLTPPKRSRGKPALSRVPFLEGVNGDSDHSGSGRSLLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ESGSDSECSLGLSGGLAFEAGSGLTPPKRSRGKPALSRVPFLEGVNGDSDHSGSGRSLLM 1010 1020 1030 1040 1050 1060 580 590 600 610 620 630 mKIAA1 PFEDHGDLEPLELVWAKCRGYPSYPALIIDPKMPREGLLHNGVPIPVPPLDVLKLGEQKQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PFEDHGDLEPLELVWAKCRGYPSYPALIIDPKMPREGLLHNGVPIPVPPLDVLKLGEQKQ 1070 1080 1090 1100 1110 1120 640 mKIAA1 AEAGERLFLVLFFDNKRTW ::::::::::::::::::: gi|148 AEAGERLFLVLFFDNKRTWQWLPRDKVLPLGVEDTVDKLKMLEGRKTSIRKSVQVAYDRA 1130 1140 1150 1160 1170 1180 >>gi|149043488|gb|EDL96939.1| bromodomain and PHD finger (1199 aa) initn: 2857 init1: 2857 opt: 4078 Z-score: 3858.2 bits: 725.0 E(): 3.4e-206 Smith-Waterman score: 4078; 94.599% identity (97.068% similar) in 648 aa overlap (2-649:497-1139) 10 20 30 mKIAA1 TQFMQRLHNYWLLKRQARNGVPLIRRLHSHL :::::::::::::::::::::::::::::: gi|149 SITVPMVTVPQIPSYRLNKICSGLSFQRKNQFMQRLHNYWLLKRQARNGVPLIRRLHSHL 470 480 490 500 510 520 40 50 60 70 80 90 mKIAA1 QSQRNAEQREQDEKTSAVKEELKYWQKLRHDLERARLLIELIRKREKLKREQVKVQQAAM ::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 QSQRNAEQREHDEKTSAVKEELKYWQKLRHDLERARLLIELIRKREKLKREQVKVQQAAM 530 540 550 560 570 580 100 110 120 130 140 150 mKIAA1 ELELMPFTVLLRTTLDLLQEKDSAHIFAEPVSLSEVPDYLEFISKPMDFSTMRRKLESHL :::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::: gi|149 ELELMPFTVLLRTTLDLLQEKDPAHIFAEPVSLSEVPDYLEFISKPMDFSTMRRKLESHL 590 600 610 620 630 640 160 170 180 190 200 210 mKIAA1 YHTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVRLRDLGGAILRHARRQAENIGYDPERG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 YHTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVRLRDLGGAILRHARRQAENIGYDPERG 650 660 670 680 690 700 220 230 240 250 260 270 mKIAA1 THLPESPRLEDFYRFSWEDVDNILIPENRAHLSPEAQLKELLEKLDLVSTMRSSGARTRR :::::::.:::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|149 THLPESPKLEDFYRFSWEDVDNILIPENRAHLSPEAQLKELLEKLDLVSAMRSSGARTRR 710 720 730 740 750 760 280 290 300 310 320 330 mKIAA1 VRMLRREINALRQKLAQPPPPQLLSLNKTVPNGELPAGSRGDTAVLEQAQQEEPEEEGDR ::::::::::::::::::::::::::.:::::::::::::::.: :::. :::::.:::: gi|149 VRMLRREINALRQKLAQPPPPQLLSLTKTVPNGELPAGSRGDAAGLEQTLQEEPEDEGDR 770 780 790 800 810 820 340 350 360 370 380 390 mKIAA1 DDSKLPAPPTLEPTGPAPSLSEQESPPDPPTLKPISDSKPSSRFLKSRKVEDEELLEKSA :::.:::::::::::::::::::::::::::::::::::::.:. : :::.::::: :: gi|149 DDSQLPAPPTLEPTGPAPSLSEQESPPDPPTLKPISDSKPSGRLPKPRKVDDEELLGDSA 830 840 850 860 870 880 400 410 420 430 440 450 mKIAA1 LQLGSEPLQCLLSDNGIDRLSLTNPDSHPDTPLGTVGRRTSVLFKKAKNGVKLQRGPDGT :::::::::::::::: ::: :::::: : ::::.::::::::::::::::::::::::: gi|149 LQLGSEPLQCLLSDNGADRLPLTNPDSPPGTPLGNVGRRTSVLFKKAKNGVKLQRGPDGT 890 900 910 920 930 940 460 470 480 490 500 510 mKIAA1 LENGEDHGPEDDPASPASTEDEHYSRKRPRSRSCSDSEGERSPQQEEETGVTNGFGKHTE ::::: : :::::: :.:: :::::::.:::::::::::::::::::::::::::: gi|149 LENGE-----DAPASPASMEEEHCSRKRPRSQSCSDSEGERSPQQEEETGVTNGFGKHTE 950 960 970 980 990 1000 520 530 540 550 560 570 mKIAA1 SGSDSECSLGLSGGLAFEAGSGLTPPKRSRGKPALSRVPFLEGVNGDSDHSGSGRSLLMP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SGSDSECSLGLSGGLAFEAGSGLTPPKRSRGKPALSRVPFLEGVNGDSDHSGSGRSLLMP 1010 1020 1030 1040 1050 1060 580 590 600 610 620 630 mKIAA1 FEDHGDLEPLELVWAKCRGYPSYPALIIDPKMPREGLLHNGVPIPVPPLDVLKLGEQKQA :::.::::::::::::::::::::::::::::::::::::::::::::::::.::::::: gi|149 FEDRGDLEPLELVWAKCRGYPSYPALIIDPKMPREGLLHNGVPIPVPPLDVLRLGEQKQA 1070 1080 1090 1100 1110 1120 640 mKIAA1 EAGERLFLVLFFDNKRTW :::::::::::::::::: gi|149 EAGERLFLVLFFDNKRTWQWLPRDKVLPLGVEDTVDKLKMLEGRKTSIRKSVQVAYDRAM 1130 1140 1150 1160 1170 1180 >>gi|71153496|sp|Q9ULD4.2|BRPF3_HUMAN RecName: Full=Brom (1205 aa) initn: 3960 init1: 3960 opt: 3960 Z-score: 3746.5 bits: 704.4 E(): 5.6e-200 Smith-Waterman score: 3960; 91.512% identity (96.451% similar) in 648 aa overlap (2-649:498-1145) 10 20 30 mKIAA1 TQFMQRLHNYWLLKRQARNGVPLIRRLHSHL :::::::::::::::::::::::::::::: gi|711 PSTLPMLAVPQIPSYRLNKICSGLSFQRKNQFMQRLHNYWLLKRQARNGVPLIRRLHSHL 470 480 490 500 510 520 40 50 60 70 80 90 mKIAA1 QSQRNAEQREQDEKTSAVKEELKYWQKLRHDLERARLLIELIRKREKLKREQVKVQQAAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|711 QSQRNAEQREQDEKTSAVKEELKYWQKLRHDLERARLLIELIRKREKLKREQVKVQQAAM 530 540 550 560 570 580 100 110 120 130 140 150 mKIAA1 ELELMPFTVLLRTTLDLLQEKDSAHIFAEPVSLSEVPDYLEFISKPMDFSTMRRKLESHL :::::::.:::::::::::::: ::::::::.:::::::::::::::::::::::::::: gi|711 ELELMPFNVLLRTTLDLLQEKDPAHIFAEPVNLSEVPDYLEFISKPMDFSTMRRKLESHL 590 600 610 620 630 640 160 170 180 190 200 210 mKIAA1 YHTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVRLRDLGGAILRHARRQAENIGYDPERG :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|711 YRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVRLRDLGGAILRHARRQAENIGYDPERG 650 660 670 680 690 700 220 230 240 250 260 270 mKIAA1 THLPESPRLEDFYRFSWEDVDNILIPENRAHLSPEAQLKELLEKLDLVSTMRSSGARTRR :::::::.:::::::::::::::::::::::::::.:::::::::::::.:::::::::: gi|711 THLPESPKLEDFYRFSWEDVDNILIPENRAHLSPEVQLKELLEKLDLVSAMRSSGARTRR 710 720 730 740 750 760 280 290 300 310 320 330 mKIAA1 VRMLRREINALRQKLAQPPPPQLLSLNKTVPNGELPAGSRGDTAVLEQAQQEEPEEEGDR ::.::::::::::::::::::: :::::: ::::::: .::.:::::: :::::..::: gi|711 VRLLRREINALRQKLAQPPPPQPPSLNKTVSNGELPAGPQGDAAVLEQALQEEPEDDGDR 770 780 790 800 810 820 340 350 360 370 380 390 mKIAA1 DDSKLPAPPTLEPTGPAPSLSEQESPPDPPTLKPISDSKPSSRFLKSRKVEDEELLEKSA :::::: ::::::::::::::::::::.:::::::.:::: ::::: ::::..:::::: gi|711 DDSKLPPPPTLEPTGPAPSLSEQESPPEPPTLKPINDSKPPSRFLKPRKVEEDELLEKSP 830 840 850 860 870 880 400 410 420 430 440 450 mKIAA1 LQLGSEPLQCLLSDNGIDRLSLTNPDSHPDTPLGTVGRRTSVLFKKAKNGVKLQRGPDGT ::::.:::: :::::::.:::: ::. :::. ::::::::::::::::::::.:: . gi|711 LQLGNEPLQRLLSDNGINRLSLMAPDTPAGTPLSGVGRRTSVLFKKAKNGVKLQRSPDRV 890 900 910 920 930 940 460 470 480 490 500 510 mKIAA1 LENGEDHGPEDDPASPASTEDEHYSRKRPRSRSCSDSEGERSPQQEEETGVTNGFGKHTE :::::::: .:::::: :.:..:::::::::::.::::::::::::::.::::::::: gi|711 LENGEDHGVAGSPASPASIEEERHSRKRPRSRSCSESEGERSPQQEEETGMTNGFGKHTE 950 960 970 980 990 1000 520 530 540 550 560 570 mKIAA1 SGSDSECSLGLSGGLAFEAGSGLTPPKRSRGKPALSRVPFLEGVNGDSDHSGSGRSLLMP ::::::::::::::::::: :::::::::::::::::::::::::::::..:::::::.: gi|711 SGSDSECSLGLSGGLAFEACSGLTPPKRSRGKPALSRVPFLEGVNGDSDYNGSGRSLLLP 1010 1020 1030 1040 1050 1060 580 590 600 610 620 630 mKIAA1 FEDHGDLEPLELVWAKCRGYPSYPALIIDPKMPREGLLHNGVPIPVPPLDVLKLGEQKQA :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|711 FEDRGDLEPLELVWAKCRGYPSYPALIIDPKMPREGLLHNGVPIPVPPLDVLKLGEQKQA 1070 1080 1090 1100 1110 1120 640 mKIAA1 EAGERLFLVLFFDNKRTW ::::.::::::::::::: gi|711 EAGEKLFLVLFFDNKRTWQWLPRDKVLPLGVEDTVDKLKMLEGRKTSIRKSVQVAYDRAM 1130 1140 1150 1160 1170 1180 >>gi|168273214|dbj|BAG10446.1| bromodomain and PHD finge (1205 aa) initn: 3955 init1: 3955 opt: 3955 Z-score: 3741.8 bits: 703.5 E(): 1e-199 Smith-Waterman score: 3955; 91.358% identity (96.451% similar) in 648 aa overlap (2-649:498-1145) 10 20 30 mKIAA1 TQFMQRLHNYWLLKRQARNGVPLIRRLHSHL :::::::::::::::::::::::::::::: gi|168 PSTLPMLAVPQIPSYRLNKICSGLSFQRKNQFMQRLHNYWLLKRQARNGVPLIRRLHSHL 470 480 490 500 510 520 40 50 60 70 80 90 mKIAA1 QSQRNAEQREQDEKTSAVKEELKYWQKLRHDLERARLLIELIRKREKLKREQVKVQQAAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 QSQRNAEQREQDEKTSAVKEELKYWQKLRHDLERARLLIELIRKREKLKREQVKVQQAAM 530 540 550 560 570 580 100 110 120 130 140 150 mKIAA1 ELELMPFTVLLRTTLDLLQEKDSAHIFAEPVSLSEVPDYLEFISKPMDFSTMRRKLESHL :::::::.:::::::::::::: ::::::::.:::::::::::::::::::::::::::: gi|168 ELELMPFNVLLRTTLDLLQEKDPAHIFAEPVNLSEVPDYLEFISKPMDFSTMRRKLESHL 590 600 610 620 630 640 160 170 180 190 200 210 mKIAA1 YHTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVRLRDLGGAILRHARRQAENIGYDPERG :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 YRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVRLRDLGGAILRHARRQAENIGYDPERG 650 660 670 680 690 700 220 230 240 250 260 270 mKIAA1 THLPESPRLEDFYRFSWEDVDNILIPENRAHLSPEAQLKELLEKLDLVSTMRSSGARTRR :::::::.:::::::::::::::::::::::::::.:::::::::::::.:::::::::: gi|168 THLPESPKLEDFYRFSWEDVDNILIPENRAHLSPEVQLKELLEKLDLVSAMRSSGARTRR 710 720 730 740 750 760 280 290 300 310 320 330 mKIAA1 VRMLRREINALRQKLAQPPPPQLLSLNKTVPNGELPAGSRGDTAVLEQAQQEEPEEEGDR ::.::::::::::::::::::: :::::: ::::::: .::.:::::: :::::..::: gi|168 VRLLRREINALRQKLAQPPPPQPPSLNKTVSNGELPAGPQGDAAVLEQALQEEPEDDGDR 770 780 790 800 810 820 340 350 360 370 380 390 mKIAA1 DDSKLPAPPTLEPTGPAPSLSEQESPPDPPTLKPISDSKPSSRFLKSRKVEDEELLEKSA :::::: ::::::::::::::::::::.:::::::.:::: ::::: ::::..:::::: gi|168 DDSKLPPPPTLEPTGPAPSLSEQESPPEPPTLKPINDSKPPSRFLKPRKVEEDELLEKSP 830 840 850 860 870 880 400 410 420 430 440 450 mKIAA1 LQLGSEPLQCLLSDNGIDRLSLTNPDSHPDTPLGTVGRRTSVLFKKAKNGVKLQRGPDGT ::::.:::: :::::::.:::: ::. :::. ::::::::::::::::::::.:: . gi|168 LQLGNEPLQRLLSDNGINRLSLMAPDTPAGTPLSGVGRRTSVLFKKAKNGVKLQRSPDRV 890 900 910 920 930 940 460 470 480 490 500 510 mKIAA1 LENGEDHGPEDDPASPASTEDEHYSRKRPRSRSCSDSEGERSPQQEEETGVTNGFGKHTE :::::::: .:::::: :.:..:::::::::::.::::::::::::::.::::::::: gi|168 LENGEDHGVAGSPASPASIEEERHSRKRPRSRSCSESEGERSPQQEEETGMTNGFGKHTE 950 960 970 980 990 1000 520 530 540 550 560 570 mKIAA1 SGSDSECSLGLSGGLAFEAGSGLTPPKRSRGKPALSRVPFLEGVNGDSDHSGSGRSLLMP ::::::::::::::::::: :::::::::::::::::::::::::::::..:::::::.: gi|168 SGSDSECSLGLSGGLAFEACSGLTPPKRSRGKPALSRVPFLEGVNGDSDYNGSGRSLLLP 1010 1020 1030 1040 1050 1060 580 590 600 610 620 630 mKIAA1 FEDHGDLEPLELVWAKCRGYPSYPALIIDPKMPREGLLHNGVPIPVPPLDVLKLGEQKQA :::.:::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 FEDRGDLKPLELVWAKCRGYPSYPALIIDPKMPREGLLHNGVPIPVPPLDVLKLGEQKQA 1070 1080 1090 1100 1110 1120 640 mKIAA1 EAGERLFLVLFFDNKRTW ::::.::::::::::::: gi|168 EAGEKLFLVLFFDNKRTWQWLPRDKVLPLGVEDTVDKLKMLEGRKTSIRKSVQVAYDRAM 1130 1140 1150 1160 1170 1180 >>gi|114607125|ref|XP_518433.2| PREDICTED: bromodomain a (1205 aa) initn: 3941 init1: 3941 opt: 3941 Z-score: 3728.5 bits: 701.1 E(): 5.7e-199 Smith-Waterman score: 3941; 91.204% identity (96.296% similar) in 648 aa overlap (2-649:498-1145) 10 20 30 mKIAA1 TQFMQRLHNYWLLKRQARNGVPLIRRLHSHL :::::::::::::::::::::::::::::: gi|114 PSTLPMLAVPQIPSYRLNKICSGLSFQRKNQFMQRLHNYWLLKRQARNGVPLIRRLHSHL 470 480 490 500 510 520 40 50 60 70 80 90 mKIAA1 QSQRNAEQREQDEKTSAVKEELKYWQKLRHDLERARLLIELIRKREKLKREQVKVQQAAM :::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 QSQRNTEQREQDEKTSAVKEELKYWQKLRHDLERARLLIELIRKREKLKREQVKVQQAAM 530 540 550 560 570 580 100 110 120 130 140 150 mKIAA1 ELELMPFTVLLRTTLDLLQEKDSAHIFAEPVSLSEVPDYLEFISKPMDFSTMRRKLESHL :::::::.:::::::::::::: ::::::::.:::::::::::::::::::::::::::: gi|114 ELELMPFNVLLRTTLDLLQEKDPAHIFAEPVNLSEVPDYLEFISKPMDFSTMRRKLESHL 590 600 610 620 630 640 160 170 180 190 200 210 mKIAA1 YHTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVRLRDLGGAILRHARRQAENIGYDPERG :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 YRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVRLRDLGGAILRHARRQAENIGYDPERG 650 660 670 680 690 700 220 230 240 250 260 270 mKIAA1 THLPESPRLEDFYRFSWEDVDNILIPENRAHLSPEAQLKELLEKLDLVSTMRSSGARTRR :::::::.:::::::::::::::::::::::::::.:::::::::::::.:::::::::: gi|114 THLPESPKLEDFYRFSWEDVDNILIPENRAHLSPEVQLKELLEKLDLVSAMRSSGARTRR 710 720 730 740 750 760 280 290 300 310 320 330 mKIAA1 VRMLRREINALRQKLAQPPPPQLLSLNKTVPNGELPAGSRGDTAVLEQAQQEEPEEEGDR ::.::::::::::::::: ::: :::::: ::::::: .::.:::::: :::::..::: gi|114 VRLLRREINALRQKLAQPLPPQPPSLNKTVSNGELPAGPQGDAAVLEQALQEEPEDDGDR 770 780 790 800 810 820 340 350 360 370 380 390 mKIAA1 DDSKLPAPPTLEPTGPAPSLSEQESPPDPPTLKPISDSKPSSRFLKSRKVEDEELLEKSA :::::: ::::::::::::::::::::.:::::::.:::: ::::: ::::..:::::: gi|114 DDSKLPPPPTLEPTGPAPSLSEQESPPEPPTLKPINDSKPPSRFLKPRKVEEDELLEKSP 830 840 850 860 870 880 400 410 420 430 440 450 mKIAA1 LQLGSEPLQCLLSDNGIDRLSLTNPDSHPDTPLGTVGRRTSVLFKKAKNGVKLQRGPDGT ::::.:::: :::::::.:::: ::. :::. ::::::::::::::::::::.:: . gi|114 LQLGNEPLQRLLSDNGINRLSLMAPDTPAGTPLSGVGRRTSVLFKKAKNGVKLQRSPDRV 890 900 910 920 930 940 460 470 480 490 500 510 mKIAA1 LENGEDHGPEDDPASPASTEDEHYSRKRPRSRSCSDSEGERSPQQEEETGVTNGFGKHTE :::::::: .:::::: :.:..:::::::::::.::::::::::::::.::::::::: gi|114 LENGEDHGVAGSPASPASIEEERHSRKRPRSRSCSESEGERSPQQEEETGMTNGFGKHTE 950 960 970 980 990 1000 520 530 540 550 560 570 mKIAA1 SGSDSECSLGLSGGLAFEAGSGLTPPKRSRGKPALSRVPFLEGVNGDSDHSGSGRSLLMP ::::::::::::::::::: :::::::::::::::::::::::::::::..:::::::.: gi|114 SGSDSECSLGLSGGLAFEACSGLTPPKRSRGKPALSRVPFLEGVNGDSDYNGSGRSLLLP 1010 1020 1030 1040 1050 1060 580 590 600 610 620 630 mKIAA1 FEDHGDLEPLELVWAKCRGYPSYPALIIDPKMPREGLLHNGVPIPVPPLDVLKLGEQKQA :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 FEDRGDLEPLELVWAKCRGYPSYPALIIDPKMPREGLLHNGVPIPVPPLDVLKLGEQKQA 1070 1080 1090 1100 1110 1120 640 mKIAA1 EAGERLFLVLFFDNKRTW ::::.::::::::::::: gi|114 EAGEKLFLVLFFDNKRTWQWLPRDKVLPLGVEDTVDKLKMLEGRKTSIRKSVQVAYDRAM 1130 1140 1150 1160 1170 1180 >>gi|194677587|ref|XP_584708.4| PREDICTED: similar to br (1207 aa) initn: 2547 init1: 2547 opt: 3930 Z-score: 3718.1 bits: 699.1 E(): 2.2e-198 Smith-Waterman score: 3930; 90.308% identity (96.154% similar) in 650 aa overlap (1-649:498-1147) 10 20 30 mKIAA1 TQFMQRLHNYWLLKRQARNGVPLIRRLHSH :::::::::::::::::::::::::::::: gi|194 MTSTVPMVTVPRIPSYRLNKICSGLSFQRKTQFMQRLHNYWLLKRQARNGVPLIRRLHSH 470 480 490 500 510 520 40 50 60 70 80 90 mKIAA1 LQSQRNAEQREQDEKTSAVKEELKYWQKLRHDLERARLLIELIRKREKLKREQVKVQQAA :::::::::::::::::::::::::::::::::::::::::::::::::::::.:.:::: gi|194 LQSQRNAEQREQDEKTSAVKEELKYWQKLRHDLERARLLIELIRKREKLKREQIKIQQAA 530 540 550 560 570 580 100 110 120 130 140 150 mKIAA1 MELELMPFTVLLRTTLDLLQEKDSAHIFAEPVSLSEVPDYLEFISKPMDFSTMRRKLESH ::::::::.:::::::::::::: ::::::::.::::::::::::::::::::::::::: gi|194 MELELMPFNVLLRTTLDLLQEKDPAHIFAEPVNLSEVPDYLEFISKPMDFSTMRRKLESH 590 600 610 620 630 640 160 170 180 190 200 210 mKIAA1 LYHTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVRLRDLGGAILRHARRQAENIGYDPER ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LYHTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVRLRDLGGAILRHARRQAENIGYDPET 650 660 670 680 690 700 220 230 240 250 260 270 mKIAA1 GTHLPESPRLEDFYRFSWEDVDNILIPENRAHLSPEAQLKELLEKLDLVSTMRSSGARTR ::::::::. ::::::::::::::::::::::::::.::::::::::::::::::::::: gi|194 GTHLPESPKSEDFYRFSWEDVDNILIPENRAHLSPEVQLKELLEKLDLVSTMRSSGARTR 710 720 730 740 750 760 280 290 300 310 320 330 mKIAA1 RVRMLRREINALRQKLAQPPPPQLLSLNKTVPNGELPAGSRGDTAVLEQAQQEEPEEEGD :::.:::::::.::::::::::: :::::: .:::::: :::.:::::: :::::..:: gi|194 RVRLLRREINAVRQKLAQPPPPQPPSLNKTVSSGELPAGPRGDVAVLEQAPQEEPEDNGD 770 780 790 800 810 820 340 350 360 370 380 390 mKIAA1 RDDSKLPAPPTLEPTGPAPSLSEQESPPDPPTLKPISDSKPSSRFLKSRKVEDEELLEKS :::::.: ::::::::::::::::::::::::::::.:::: ::.:: ::.:..:::::: gi|194 RDDSKMPPPPTLEPTGPAPSLSEQESPPDPPTLKPINDSKPPSRLLKPRKAEEDELLEKS 830 840 850 860 870 880 400 410 420 430 440 mKIAA1 ALQLGSEPLQCLLSDNGIDRLSLTNPDSHPD-TPLGTVGRRTSVLFKKAKNGVKLQRGPD ::::::::: :::::::.:.:: ::. : .::. ::::::::::::.:::::::.:: gi|194 PLQLGSEPLQRLLSDNGINRVSLMAPDTSPTGAPLSGVGRRTSVLFKKARNGVKLQRSPD 890 900 910 920 930 940 450 460 470 480 490 500 mKIAA1 GTLENGEDHGPEDDPASPASTEDEHYSRKRPRSRSCSDSEGERSPQQEEETGVTNGFGKH .:::::::: :.:.:::: :::..:::::::::::.:::::::::::::::::::::: gi|194 RALENGEDHGTADSPVSPASIEDERHSRKRPRSRSCSQSEGERSPQQEEETGVTNGFGKH 950 960 970 980 990 1000 510 520 530 540 550 560 mKIAA1 TESGSDSECSLGLSGGLAFEAGSGLTPPKRSRGKPALSRVPFLEGVNGDSDHSGSGRSLL :::::::::::::..:::::: :: ::::::::::::::::::::::::::...:::::: gi|194 TESGSDSECSLGLGSGLAFEACSGRTPPKRSRGKPALSRVPFLEGVNGDSDYNSSGRSLL 1010 1020 1030 1040 1050 1060 570 580 590 600 610 620 mKIAA1 MPFEDHGDLEPLELVWAKCRGYPSYPALIIDPKMPREGLLHNGVPIPVPPLDVLKLGEQK :::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 MPFEDRGDLEPLELVWAKCRGYPSYPALIIDPKMPREGLLHNGVPIPVPPLDVLKLGEQK 1070 1080 1090 1100 1110 1120 630 640 mKIAA1 QAEAGERLFLVLFFDNKRTW ::::::.::::::::::::: gi|194 QAEAGEKLFLVLFFDNKRTWQWLPRDKVLPLGVEDTVDKLKMLEGRKTSIRKSVQVAYDR 1130 1140 1150 1160 1170 1180 >>gi|73972700|ref|XP_538883.2| PREDICTED: similar to Bro (1319 aa) initn: 2118 init1: 2118 opt: 3929 Z-score: 3716.7 bits: 699.0 E(): 2.6e-198 Smith-Waterman score: 3929; 90.909% identity (96.148% similar) in 649 aa overlap (2-649:611-1259) 10 20 30 mKIAA1 TQFMQRLHNYWLLKRQARNGVPLIRRLHSHL ::.::::::::::::::::::::::::::: gi|739 PSTVPMVTVPQIPSYRLNKICSGLSFQRKNQFIQRLHNYWLLKRQARNGVPLIRRLHSHL 590 600 610 620 630 640 40 50 60 70 80 90 mKIAA1 QSQRNAEQREQDEKTSAVKEELKYWQKLRHDLERARLLIELIRKREKLKREQVKVQQAAM ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|739 QSQRNAEQREQDEKTSAVKEELKYWQKLRHDLERARLLIELIRKREKLKREQVKIQQAAM 650 660 670 680 690 700 100 110 120 130 140 150 mKIAA1 ELELMPFTVLLRTTLDLLQEKDSAHIFAEPVSLSEVPDYLEFISKPMDFSTMRRKLESHL :::::::.:::::::::::::: ::::::::.:::::::::::::::::::::::::::: gi|739 ELELMPFNVLLRTTLDLLQEKDPAHIFAEPVNLSEVPDYLEFISKPMDFSTMRRKLESHL 710 720 730 740 750 760 160 170 180 190 200 210 mKIAA1 YHTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVRLRDLGGAILRHARRQAENIGYDPERG :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 YRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVRLRDLGGAILRHARRQAENIGYDPERG 770 780 790 800 810 820 220 230 240 250 260 270 mKIAA1 THLPESPRLEDFYRFSWEDVDNILIPENRAHLSPEAQLKELLEKLDLVSTMRSSGARTRR :::::::.:::::::::::::::::::::::::::.:::::::::::::.:::::::::: gi|739 THLPESPKLEDFYRFSWEDVDNILIPENRAHLSPEVQLKELLEKLDLVSAMRSSGARTRR 830 840 850 860 870 880 280 290 300 310 320 330 mKIAA1 VRMLRREINALRQKLAQPPPP-QLLSLNKTVPNGELPAGSRGDTAVLEQAQQEEPEEEGD ::.:::::::::::::::::: : :::::: :::::: ..::..::::: :::::..:: gi|739 VRLLRREINALRQKLAQPPPPPQPPSLNKTVSNGELPAEAQGDVTVLEQAPQEEPEDDGD 890 900 910 920 930 940 340 350 360 370 380 390 mKIAA1 RDDSKLPAPPTLEPTGPAPSLSEQESPPDPPTLKPISDSKPSSRFLKSRKVEDEELLEKS ::::::: ::::::::::::::::.:::::::::::.:::: ::::: ::::..:::::: gi|739 RDDSKLPPPPTLEPTGPAPSLSEQDSPPDPPTLKPINDSKPPSRFLKPRKVEEDELLEKS 950 960 970 980 990 1000 400 410 420 430 440 450 mKIAA1 ALQLGSEPLQCLLSDNGIDRLSLTNPDSHPDTPLGTVGRRTSVLFKKAKNGVKLQRGPDG ::.:::::: :::::::.:.:: :: :::. ::::::::::::::::::::.:: gi|739 PLQIGSEPLQRLLSDNGINRVSLMAPDVPAGTPLSGVGRRTSVLFKKAKNGVKLQRSPDR 1010 1020 1030 1040 1050 1060 460 470 480 490 500 510 mKIAA1 TLENGEDHGPEDDPASPASTEDEHYSRKRPRSRSCSDSEGERSPQQEEETGVTNGFGKHT .:::::::: .:::::: :::..:::::::::::.:::::::.::::::::::::::: gi|739 ALENGEDHGAVGSPASPASIEDEQHSRKRPRSRSCSESEGERSPRQEEETGVTNGFGKHT 1070 1080 1090 1100 1110 1120 520 530 540 550 560 570 mKIAA1 ESGSDSECSLGLSGGLAFEAGSGLTPPKRSRGKPALSRVPFLEGVNGDSDHSGSGRSLLM :::::::::::::::::::: :::::::::::::::::::::::::::::.:.::::::: gi|739 ESGSDSECSLGLSGGLAFEACSGLTPPKRSRGKPALSRVPFLEGVNGDSDYSSSGRSLLM 1130 1140 1150 1160 1170 1180 580 590 600 610 620 630 mKIAA1 PFEDHGDLEPLELVWAKCRGYPSYPALIIDPKMPREGLLHNGVPIPVPPLDVLKLGEQKQ ::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 PFEDRGDLEPLELVWAKCRGYPSYPALIIDPKMPREGLLHNGVPIPVPPLDVLKLGEQKQ 1190 1200 1210 1220 1230 1240 640 mKIAA1 AEAGERLFLVLFFDNKRTW :::::.::::::::::::: gi|739 AEAGEKLFLVLFFDNKRTWQWLPRDKVLPLGVEDTVDKLKMLEGRKTSIRKSVQVAYDRA 1250 1260 1270 1280 1290 1300 >>gi|119624285|gb|EAX03880.1| bromodomain and PHD finger (1204 aa) initn: 3925 init1: 3151 opt: 3927 Z-score: 3715.3 bits: 698.6 E(): 3.1e-198 Smith-Waterman score: 3927; 91.049% identity (96.296% similar) in 648 aa overlap (2-649:498-1144) 10 20 30 mKIAA1 TQFMQRLHNYWLLKRQARNGVPLIRRLHSHL :::::::::::::::::::::::::::::: gi|119 PSTLPMLAVPQIPSYRLNKICSGLSFQRKNQFMQRLHNYWLLKRQARNGVPLIRRLHSHL 470 480 490 500 510 520 40 50 60 70 80 90 mKIAA1 QSQRNAEQREQDEKTSAVKEELKYWQKLRHDLERARLLIELIRKREKLKREQVKVQQAAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QSQRNAEQREQDEKTSAVKEELKYWQKLRHDLERARLLIELIRKREKLKREQVKVQQAAM 530 540 550 560 570 580 100 110 120 130 140 150 mKIAA1 ELELMPFTVLLRTTLDLLQEKDSAHIFAEPVSLSEVPDYLEFISKPMDFSTMRRKLESHL :::::::.:::::::::::::: ::::::::.:::. .:::::::::::::::::::::: gi|119 ELELMPFNVLLRTTLDLLQEKDPAHIFAEPVNLSEA-NYLEFISKPMDFSTMRRKLESHL 590 600 610 620 630 640 160 170 180 190 200 210 mKIAA1 YHTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVRLRDLGGAILRHARRQAENIGYDPERG :.:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 YRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVRLRDLGGAILRHARRQAENIGYDPERG 650 660 670 680 690 700 220 230 240 250 260 270 mKIAA1 THLPESPRLEDFYRFSWEDVDNILIPENRAHLSPEAQLKELLEKLDLVSTMRSSGARTRR :::::::.:::::::::::::::::::::::::::.:::::::::::::.:::::::::: gi|119 THLPESPKLEDFYRFSWEDVDNILIPENRAHLSPEVQLKELLEKLDLVSAMRSSGARTRR 710 720 730 740 750 760 280 290 300 310 320 330 mKIAA1 VRMLRREINALRQKLAQPPPPQLLSLNKTVPNGELPAGSRGDTAVLEQAQQEEPEEEGDR ::.::::::::::::::::::: :::::: ::::::: .::.:::::: :::::..::: gi|119 VRLLRREINALRQKLAQPPPPQPPSLNKTVSNGELPAGPQGDAAVLEQALQEEPEDDGDR 770 780 790 800 810 820 340 350 360 370 380 390 mKIAA1 DDSKLPAPPTLEPTGPAPSLSEQESPPDPPTLKPISDSKPSSRFLKSRKVEDEELLEKSA :::::: ::::::::::::::::::::.:::::::.:::: ::::: ::::..:::::: gi|119 DDSKLPPPPTLEPTGPAPSLSEQESPPEPPTLKPINDSKPPSRFLKPRKVEEDELLEKSP 830 840 850 860 870 880 400 410 420 430 440 450 mKIAA1 LQLGSEPLQCLLSDNGIDRLSLTNPDSHPDTPLGTVGRRTSVLFKKAKNGVKLQRGPDGT ::::.:::: :::::::.:::: ::. :::. ::::::::::::::::::::.:: . gi|119 LQLGNEPLQRLLSDNGINRLSLMAPDTPAGTPLSGVGRRTSVLFKKAKNGVKLQRSPDRV 890 900 910 920 930 940 460 470 480 490 500 510 mKIAA1 LENGEDHGPEDDPASPASTEDEHYSRKRPRSRSCSDSEGERSPQQEEETGVTNGFGKHTE :::::::: .:::::: :.:..:::::::::::.::::::::::::::.::::::::: gi|119 LENGEDHGVAGSPASPASIEEERHSRKRPRSRSCSESEGERSPQQEEETGMTNGFGKHTE 950 960 970 980 990 1000 520 530 540 550 560 570 mKIAA1 SGSDSECSLGLSGGLAFEAGSGLTPPKRSRGKPALSRVPFLEGVNGDSDHSGSGRSLLMP ::::::::::::::::::: :::::::::::::::::::::::::::::..:::::::.: gi|119 SGSDSECSLGLSGGLAFEACSGLTPPKRSRGKPALSRVPFLEGVNGDSDYNGSGRSLLLP 1010 1020 1030 1040 1050 1060 580 590 600 610 620 630 mKIAA1 FEDHGDLEPLELVWAKCRGYPSYPALIIDPKMPREGLLHNGVPIPVPPLDVLKLGEQKQA :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FEDRGDLEPLELVWAKCRGYPSYPALIIDPKMPREGLLHNGVPIPVPPLDVLKLGEQKQA 1070 1080 1090 1100 1110 1120 640 mKIAA1 EAGERLFLVLFFDNKRTW ::::.::::::::::::: gi|119 EAGEKLFLVLFFDNKRTWQWLPRDKVLPLGVEDTVDKLKMLEGRKTSIRKSVQVAYDRAM 1130 1140 1150 1160 1170 1180 >>gi|194223447|ref|XP_001918146.1| PREDICTED: bromodomai (1206 aa) initn: 3902 init1: 3628 opt: 3904 Z-score: 3693.5 bits: 694.6 E(): 5e-197 Smith-Waterman score: 3904; 90.586% identity (95.679% similar) in 648 aa overlap (2-649:500-1146) 10 20 30 mKIAA1 TQFMQRLHNYWLLKRQARNGVPLIRRLHSHL :::::::::::::::::::::::::::::: gi|194 PSTLPMVTVPQIPSYRLNKICSGLSFQRKNQFMQRLHNYWLLKRQARNGVPLIRRLHSHL 470 480 490 500 510 520 40 50 60 70 80 90 mKIAA1 QSQRNAEQREQDEKTSAVKEELKYWQKLRHDLERARLLIELIRKREKLKREQVKVQQAAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 QSQRNAEQREQDEKTSAVKEELKYWQKLRHDLERARLLIELIRKREKLKREQVKVQQAAM 530 540 550 560 570 580 100 110 120 130 140 150 mKIAA1 ELELMPFTVLLRTTLDLLQEKDSAHIFAEPVSLSEVPDYLEFISKPMDFSTMRRKLESHL :::::::.:::::::::::::: ::::::::.:::::::::::::::::::::::::::: gi|194 ELELMPFNVLLRTTLDLLQEKDPAHIFAEPVNLSEVPDYLEFISKPMDFSTMRRKLESHL 590 600 610 620 630 640 160 170 180 190 200 210 mKIAA1 YHTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVRLRDLGGAILRHARRQAENIGYDPERG :.:::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|194 YRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVRLRDLGGAVLRHARRQAENIGYDPERG 650 660 670 680 690 700 220 230 240 250 260 270 mKIAA1 THLPESPRLEDFYRFSWEDVDNILIPENRAHLSPEAQLKELLEKLDLVSTMRSSGARTRR :::::::.:::::::::::::::::::::::::::.:::::::::::::.:::::::::: gi|194 THLPESPKLEDFYRFSWEDVDNILIPENRAHLSPEVQLKELLEKLDLVSAMRSSGARTRR 710 720 730 740 750 760 280 290 300 310 320 330 mKIAA1 VRMLRREINALRQKLAQPPPPQLLSLNKTVPNGELPAGSRGDTAVLEQAQQEEPEEEGDR ::.::::::::::::::::: : :::::: ::::::: :::.:: : : :::::..::: gi|194 VRLLRREINALRQKLAQPPPSQPPSLNKTVSNGELPAGPRGDSAVPEPAPQEEPEDDGDR 770 780 790 800 810 820 340 350 360 370 380 390 mKIAA1 DDSKLPAPPTLEPTGPAPSLSEQESPPDPPTLKPISDSKPSSRFLKSRKVEDEELLEKSA :::::: ::::::::::::::::: ::::::::::..::: ::.:: ::::..:::::: gi|194 DDSKLPPPPTLEPTGPAPSLSEQEFPPDPPTLKPINESKPLSRYLKPRKVEEDELLEKSP 830 840 850 860 870 880 400 410 420 430 440 450 mKIAA1 LQLGSEPLQCLLSDNGIDRLSLTNPDSHPDTPLGTVGRRTSVLFKKAKNGVKLQRGPDGT ::::::::: :::::::.:.:: ::. ..::. ::::::::::::::::::::.:::. gi|194 LQLGSEPLQRLLSDNGINRVSLMAPDTPTSAPLSGVGRRTSVLFKKAKNGVKLQRSPDGA 890 900 910 920 930 940 460 470 480 490 500 510 mKIAA1 LENGEDHGPEDDPASPASTEDEHYSRKRPRSRSCSDSEGERSPQQEEETGVTNGFGKHTE :::::::: .:::::: :::..::::::::: :.::::.::::::::::::::::: : gi|194 LENGEDHGAVGSPASPASIEDERHSRKRPRSRSGSESEGEKSPQQEEETGVTNGFGKHPE 950 960 970 980 990 1000 520 530 540 550 560 570 mKIAA1 SGSDSECSLGLSGGLAFEAGSGLTPPKRSRGKPALSRVPFLEGVNGDSDHSGSGRSLLMP ::::::::::::::::::: :::::::::::::::::::::::::::::.:::::::::: gi|194 SGSDSECSLGLSGGLAFEACSGLTPPKRSRGKPALSRVPFLEGVNGDSDYSGSGRSLLMP 1010 1020 1030 1040 1050 1060 580 590 600 610 620 630 mKIAA1 FEDHGDLEPLELVWAKCRGYPSYPALIIDPKMPREGLLHNGVPIPVPPLDVLKLGEQKQA :::.:::::::::::::::::::::::::::::: ::::::::::::::::::::::.:: gi|194 FEDRGDLEPLELVWAKCRGYPSYPALIIDPKMPR-GLLHNGVPIPVPPLDVLKLGEQRQA 1070 1080 1090 1100 1110 1120 640 mKIAA1 EAGERLFLVLFFDNKRTW ::::.::::::::::::: gi|194 EAGEKLFLVLFFDNKRTWQWLPRDKVLPLGVEDTVDKLKMLEGRKTSIRKSVQVAYDRAM 1130 1140 1150 1160 1170 1180 649 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Fri Mar 13 13:35:18 2009 done: Fri Mar 13 13:43:12 2009 Total Scan time: 1048.140 Total Display time: 0.320 Function used was FASTA [version 34.26.5 April 26, 2007]