# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -E0.01 -H -O./tmp/mpm06060.fasta.nr -Q ../query/mKIAA1367.ptfa /cdna4/rodent/rouge_util/new.rouge/nfasta/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 mKIAA1367, 809 aa vs /cdna4/rodent/rouge_util/new.rouge/nfasta/nr library 2727779818 residues in 7921681 sequences statistics sampled from 60000 to 7919602 sequences Expectation_n fit: rho(ln(x))= 5.4530+/-0.000186; mu= 12.4351+/- 0.010 mean_var=83.6818+/-16.277, 0's: 47 Z-trim: 53 B-trim: 94 in 1/66 Lambda= 0.140203 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7921681) gi|18202027|sp|O35218.1|CPSF2_MOUSE RecName: Full= ( 782) 5184 1058.8 0 gi|149025374|gb|EDL81741.1| cleavage and polyadeny ( 782) 5160 1054.0 0 gi|109084634|ref|XP_001092942.1| PREDICTED: simila ( 782) 5133 1048.5 0 gi|149737455|ref|XP_001497134.1| PREDICTED: simila ( 782) 5131 1048.1 0 gi|1706103|sp|Q10568.1|CPSF2_BOVIN RecName: Full=C ( 782) 5130 1047.9 0 gi|73962293|ref|XP_537353.2| PREDICTED: similar to ( 782) 5128 1047.5 0 gi|51338827|sp|Q9P2I0.2|CPSF2_HUMAN RecName: Full= ( 782) 5127 1047.3 0 gi|47125306|gb|AAH70095.1| Cleavage and polyadenyl ( 782) 5115 1044.9 0 gi|126282067|ref|XP_001365312.1| PREDICTED: simila ( 782) 5105 1042.8 0 gi|149531954|ref|XP_001507374.1| PREDICTED: simila ( 782) 5097 1041.2 0 gi|73962299|ref|XP_848582.1| PREDICTED: similar to ( 776) 5066 1034.9 0 gi|224051637|ref|XP_002200593.1| PREDICTED: cleava ( 782) 4994 1020.4 0 gi|60098929|emb|CAH65295.1| hypothetical protein [ ( 782) 4983 1018.2 0 gi|126282070|ref|XP_001365385.1| PREDICTED: simila ( 788) 4970 1015.5 0 gi|13938095|gb|AAH07163.1| Cpsf2 protein [Mus musc ( 732) 4854 992.0 0 gi|170285004|gb|AAI61233.1| LOC100145546 protein [ ( 783) 4846 990.4 0 gi|18203567|sp|Q9W799.1|CPSF2_XENLA RecName: Full= ( 783) 4796 980.3 0 gi|49903850|gb|AAH76029.1| Cleavage and polyadenyl ( 790) 4548 930.2 0 gi|193785772|dbj|BAG51207.1| unnamed protein produ ( 690) 4517 923.9 0 gi|223648270|gb|ACN10893.1| Cleavage and polyadeny ( 796) 3868 792.6 0 gi|67968123|dbj|BAE00542.1| unnamed protein produc ( 592) 3859 790.7 0 gi|209156194|gb|ACI34329.1| Cleavage and polyadeny ( 796) 3832 785.3 0 gi|193786016|dbj|BAG50992.1| unnamed protein produ ( 644) 3431 704.2 4.4e-200 gi|10241720|emb|CAC09445.1| hypothetical protein [ ( 504) 3304 678.4 2e-192 gi|74183852|dbj|BAE24504.1| unnamed protein produc ( 493) 3278 673.1 7.4e-191 gi|119601887|gb|EAW81481.1| cleavage and polyadeny ( 496) 3247 666.9 5.7e-189 gi|115762659|ref|XP_780045.2| PREDICTED: similar t ( 776) 3200 657.5 5.9e-186 gi|109084636|ref|XP_001092828.1| PREDICTED: simila ( 731) 3180 653.4 9.2e-185 gi|114654445|ref|XP_001147204.1| PREDICTED: cleava ( 731) 3180 653.4 9.2e-185 gi|73962297|ref|XP_856455.1| PREDICTED: similar to ( 731) 3175 652.4 1.9e-184 gi|47224566|emb|CAG03550.1| unnamed protein produc ( 765) 2888 594.4 5.8e-167 gi|198428144|ref|XP_002129804.1| PREDICTED: simila ( 784) 2869 590.6 8.4e-166 gi|73962295|ref|XP_856414.1| PREDICTED: similar to ( 741) 2736 563.6 1e-157 gi|74188762|dbj|BAE28111.1| unnamed protein produc ( 412) 2729 562.0 1.7e-157 gi|74194185|dbj|BAE24650.1| unnamed protein produc ( 396) 2637 543.4 6.7e-152 gi|119601889|gb|EAW81483.1| cleavage and polyadeny ( 690) 2591 534.3 6.5e-149 gi|156551217|ref|XP_001601407.1| PREDICTED: simila ( 738) 2564 528.8 3e-147 gi|108884656|gb|EAT48881.1| cleavage and polyadeny ( 744) 2547 525.4 3.3e-146 gi|167869453|gb|EDS32836.1| cleavage and polyadeny ( 747) 2540 524.0 8.8e-146 gi|157018137|gb|EAA08192.4| AGAP002474-PA [Anophel ( 745) 2528 521.6 4.7e-145 gi|194038276|ref|XP_001926907.1| PREDICTED: cleava ( 515) 2522 520.2 8.2e-145 gi|66508341|ref|XP_394940.2| PREDICTED: similar to ( 737) 2517 519.3 2.2e-144 gi|193916061|gb|EDW14928.1| GI23051 [Drosophila mo ( 754) 2463 508.4 4.3e-141 gi|193896140|gb|EDV95006.1| GH10247 [Drosophila gr ( 754) 2455 506.8 1.3e-140 gi|210122703|gb|EEA70408.1| hypothetical protein B ( 607) 2319 479.2 2.1e-132 gi|194131259|gb|EDW53302.1| GM12754 [Drosophila se ( 743) 2312 477.9 6.7e-132 gi|67968624|dbj|BAE00671.1| unnamed protein produc ( 341) 2232 461.4 2.7e-127 gi|198131825|gb|EDY67988.1| GA26549 [Drosophila ps ( 757) 2226 460.5 1.2e-126 gi|156225579|gb|EDO46395.1| predicted protein [Nem ( 737) 2184 452.0 4.1e-124 gi|194168064|gb|EDW82965.1| GK22564 [Drosophila wi ( 757) 2063 427.5 9.8e-117 >>gi|18202027|sp|O35218.1|CPSF2_MOUSE RecName: Full=Clea (782 aa) initn: 5184 init1: 5184 opt: 5184 Z-score: 5663.6 bits: 1058.8 E(): 0 Smith-Waterman score: 5184; 100.000% identity (100.000% similar) in 782 aa overlap (28-809:1-782) 10 20 30 40 50 60 mKIAA1 GLGRAADGAGGRLAWQALLATHYWTRKMTSIIKLTTLSGVQEESALCYLLQVDEFRFLLD ::::::::::::::::::::::::::::::::: gi|182 MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLD 10 20 30 70 80 90 100 110 120 mKIAA1 CGWDEHFSVDIIDSLRKHVHQIDAVLLSHPDPLHLGALPFAVGKLGLNCAIYATIPVYKM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|182 CGWDEHFSVDIIDSLRKHVHQIDAVLLSHPDPLHLGALPFAVGKLGLNCAIYATIPVYKM 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 GQMFMYDLYQSRHNTEDFTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|182 GQMFMYDLYQSRHNTEDFTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGH 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 MIGGTIWKIVKDGEEEIVYAVDFNHKREIHLNGCSLEMLSRPSLLITDSFNATYVQPRRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|182 MIGGTIWKIVKDGEEEIVYAVDFNHKREIHLNGCSLEMLSRPSLLITDSFNATYVQPRRK 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 QRDEQLLTNVLETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVYSLALLNNVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|182 QRDEQLLTNVLETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVYSLALLNNVS 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA1 YNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQPDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|182 YNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQPDL 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA1 ECGFSRDLFIQWCQDPKNSIILTYRTTPGTLARFLIDNPTEKVTEIELRKRVKLEGKELE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|182 ECGFSRDLFIQWCQDPKNSIILTYRTTPGTLARFLIDNPTEKVTEIELRKRVKLEGKELE 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA1 EYVEKEKLKKEAAKKLEQSKEADIDSSDESDVEEDVDQPSAHKTKHDLMMKGEGSRKGSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|182 EYVEKEKLKKEAAKKLEQSKEADIDSSDESDVEEDVDQPSAHKTKHDLMMKGEGSRKGSF 400 410 420 430 440 450 490 500 510 520 530 540 mKIAA1 FKQAKKSYPMFPAPEERIKWDEYGEIIKPEDFLVPELQATEEEKSKLESGLTNGEEPMDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|182 FKQAKKSYPMFPAPEERIKWDEYGEIIKPEDFLVPELQATEEEKSKLESGLTNGEEPMDQ 460 470 480 490 500 510 550 560 570 580 590 600 mKIAA1 DLSDVPTKCVSATESIEIKARVTYIDYEGRSDGDSIKKIINQMKPRQLIIVHGPPEASQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|182 DLSDVPTKCVSATESIEIKARVTYIDYEGRSDGDSIKKIINQMKPRQLIIVHGPPEASQD 520 530 540 550 560 570 610 620 630 640 650 660 mKIAA1 LAECCRAFGGKDIKVYMPKLHETVDATSETHIYQVRLKDSLVSSLQFCKAKDAELAWIDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|182 LAECCRAFGGKDIKVYMPKLHETVDATSETHIYQVRLKDSLVSSLQFCKAKDAELAWIDG 580 590 600 610 620 630 670 680 690 700 710 720 mKIAA1 VLDMRVSKVDTGVILEEGELKDDGEDSEMQVDAPSDSSAMAQQKAMKSLFGEDEKELGEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|182 VLDMRVSKVDTGVILEEGELKDDGEDSEMQVDAPSDSSAMAQQKAMKSLFGEDEKELGEE 640 650 660 670 680 690 730 740 750 760 770 780 mKIAA1 TEIIPTLEPLPPHEVPGHQSVFMNEPRLSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|182 TEIIPTLEPLPPHEVPGHQSVFMNEPRLSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRT 700 710 720 730 740 750 790 800 mKIAA1 ETGRIGLEGCLCQDFYRIRDLLYEQYAIV ::::::::::::::::::::::::::::: gi|182 ETGRIGLEGCLCQDFYRIRDLLYEQYAIV 760 770 780 >>gi|149025374|gb|EDL81741.1| cleavage and polyadenylati (782 aa) initn: 5160 init1: 5160 opt: 5160 Z-score: 5637.4 bits: 1054.0 E(): 0 Smith-Waterman score: 5160; 99.105% identity (100.000% similar) in 782 aa overlap (28-809:1-782) 10 20 30 40 50 60 mKIAA1 GLGRAADGAGGRLAWQALLATHYWTRKMTSIIKLTTLSGVQEESALCYLLQVDEFRFLLD ::::::::::::::::::::::::::::::::: gi|149 MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLD 10 20 30 70 80 90 100 110 120 mKIAA1 CGWDEHFSVDIIDSLRKHVHQIDAVLLSHPDPLHLGALPFAVGKLGLNCAIYATIPVYKM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 CGWDEHFSVDIIDSLRKHVHQIDAVLLSHPDPLHLGALPFAVGKLGLNCAIYATIPVYKM 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 GQMFMYDLYQSRHNTEDFTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GQMFMYDLYQSRHNTEDFTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGH 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 MIGGTIWKIVKDGEEEIVYAVDFNHKREIHLNGCSLEMLSRPSLLITDSFNATYVQPRRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 MIGGTIWKIVKDGEEEIVYAVDFNHKREIHLNGCSLEMLSRPSLLITDSFNATYVQPRRK 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 QRDEQLLTNVLETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVYSLALLNNVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 QRDEQLLTNVLETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVYSLALLNNVS 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA1 YNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQPDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 YNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQPDL 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA1 ECGFSRDLFIQWCQDPKNSIILTYRTTPGTLARFLIDNPTEKVTEIELRKRVKLEGKELE :::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::: gi|149 ECGFSRDLFIQWCQDPKNSIILTYRTTPGTLARFLIDNPSEKVTEIELRKRVKLEGKELE 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA1 EYVEKEKLKKEAAKKLEQSKEADIDSSDESDVEEDVDQPSAHKTKHDLMMKGEGSRKGSF :::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::: gi|149 EYVEKEKLKKEAAKKLEQSKEADIDSSDESDVEEDVDQPTAHKTKHDLMMKGEGSRKGSF 400 410 420 430 440 450 490 500 510 520 530 540 mKIAA1 FKQAKKSYPMFPAPEERIKWDEYGEIIKPEDFLVPELQATEEEKSKLESGLTNGEEPMDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 FKQAKKSYPMFPAPEERIKWDEYGEIIKPEDFLVPELQATEEEKSKLESGLTNGEEPMDQ 460 470 480 490 500 510 550 560 570 580 590 600 mKIAA1 DLSDVPTKCVSATESIEIKARVTYIDYEGRSDGDSIKKIINQMKPRQLIIVHGPPEASQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 DLSDVPTKCVSATESIEIKARVTYIDYEGRSDGDSIKKIINQMKPRQLIIVHGPPEASQD 520 530 540 550 560 570 610 620 630 640 650 660 mKIAA1 LAECCRAFGGKDIKVYMPKLHETVDATSETHIYQVRLKDSLVSSLQFCKAKDAELAWIDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LAECCRAFGGKDIKVYMPKLHETVDATSETHIYQVRLKDSLVSSLQFCKAKDAELAWIDG 580 590 600 610 620 630 670 680 690 700 710 720 mKIAA1 VLDMRVSKVDTGVILEEGELKDDGEDSEMQVDAPSDSSAMAQQKAMKSLFGEDEKELGEE ::::::::::::::::::::::::::::::::::::::..:::::::::::.:::::::: gi|149 VLDMRVSKVDTGVILEEGELKDDGEDSEMQVDAPSDSSVIAQQKAMKSLFGDDEKELGEE 640 650 660 670 680 690 730 740 750 760 770 780 mKIAA1 TEIIPTLEPLPPHEVPGHQSVFMNEPRLSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRT .:.::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SEVIPTLEPLPPHEVPGHQSVFMNEPRLSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRT 700 710 720 730 740 750 790 800 mKIAA1 ETGRIGLEGCLCQDFYRIRDLLYEQYAIV ::::::::::::::::::::::::::::: gi|149 ETGRIGLEGCLCQDFYRIRDLLYEQYAIV 760 770 780 >>gi|109084634|ref|XP_001092942.1| PREDICTED: similar to (782 aa) initn: 5133 init1: 5133 opt: 5133 Z-score: 5607.9 bits: 1048.5 E(): 0 Smith-Waterman score: 5133; 98.082% identity (99.872% similar) in 782 aa overlap (28-809:1-782) 10 20 30 40 50 60 mKIAA1 GLGRAADGAGGRLAWQALLATHYWTRKMTSIIKLTTLSGVQEESALCYLLQVDEFRFLLD ::::::::::::::::::::::::::::::::: gi|109 MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLD 10 20 30 70 80 90 100 110 120 mKIAA1 CGWDEHFSVDIIDSLRKHVHQIDAVLLSHPDPLHLGALPFAVGKLGLNCAIYATIPVYKM ::::::::.::::::::::::::::::::::::::::::.:::::::::::::::::::: gi|109 CGWDEHFSMDIIDSLRKHVHQIDAVLLSHPDPLHLGALPYAVGKLGLNCAIYATIPVYKM 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 GQMFMYDLYQSRHNTEDFTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GQMFMYDLYQSRHNTEDFTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGH 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 MIGGTIWKIVKDGEEEIVYAVDFNHKREIHLNGCSLEMLSRPSLLITDSFNATYVQPRRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 MIGGTIWKIVKDGEEEIVYAVDFNHKREIHLNGCSLEMLSRPSLLITDSFNATYVQPRRK 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 QRDEQLLTNVLETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVYSLALLNNVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 QRDEQLLTNVLETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVYSLALLNNVS 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA1 YNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQPDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 YNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQPDL 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA1 ECGFSRDLFIQWCQDPKNSIILTYRTTPGTLARFLIDNPTEKVTEIELRKRVKLEGKELE :::::::::::::::::::::::::::::::::::::::.::.::::::::::::::::: gi|109 ECGFSRDLFIQWCQDPKNSIILTYRTTPGTLARFLIDNPSEKITEIELRKRVKLEGKELE 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA1 EYVEKEKLKKEAAKKLEQSKEADIDSSDESDVEEDVDQPSAHKTKHDLMMKGEGSRKGSF ::.::::::::::::::::::::::::::::.:::.:::::::::::::::::::::::: gi|109 EYLEKEKLKKEAAKKLEQSKEADIDSSDESDIEEDIDQPSAHKTKHDLMMKGEGSRKGSF 400 410 420 430 440 450 490 500 510 520 530 540 mKIAA1 FKQAKKSYPMFPAPEERIKWDEYGEIIKPEDFLVPELQATEEEKSKLESGLTNGEEPMDQ ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|109 FKQAKKSYPMFPAPEERIKWDEYGEIIKPEDFLVPELQATEEEKSKLESGLTNGDEPMDQ 460 470 480 490 500 510 550 560 570 580 590 600 mKIAA1 DLSDVPTKCVSATESIEIKARVTYIDYEGRSDGDSIKKIINQMKPRQLIIVHGPPEASQD :::::::::.:.:::::::::::::::::::::::::::::::::::::::::::::::: gi|109 DLSDVPTKCISTTESIEIKARVTYIDYEGRSDGDSIKKIINQMKPRQLIIVHGPPEASQD 520 530 540 550 560 570 610 620 630 640 650 660 mKIAA1 LAECCRAFGGKDIKVYMPKLHETVDATSETHIYQVRLKDSLVSSLQFCKAKDAELAWIDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LAECCRAFGGKDIKVYMPKLHETVDATSETHIYQVRLKDSLVSSLQFCKAKDAELAWIDG 580 590 600 610 620 630 670 680 690 700 710 720 mKIAA1 VLDMRVSKVDTGVILEEGELKDDGEDSEMQVDAPSDSSAMAQQKAMKSLFGEDEKELGEE ::::::::::::::::::::::::::::::::::::::..:::::::::::.:::: ::: gi|109 VLDMRVSKVDTGVILEEGELKDDGEDSEMQVDAPSDSSVIAQQKAMKSLFGDDEKETGEE 640 650 660 670 680 690 730 740 750 760 770 780 mKIAA1 TEIIPTLEPLPPHEVPGHQSVFMNEPRLSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRT .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SEIIPTLEPLPPHEVPGHQSVFMNEPRLSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRT 700 710 720 730 740 750 790 800 mKIAA1 ETGRIGLEGCLCQDFYRIRDLLYEQYAIV ::::::::::::::::::::::::::::: gi|109 ETGRIGLEGCLCQDFYRIRDLLYEQYAIV 760 770 780 >>gi|149737455|ref|XP_001497134.1| PREDICTED: similar to (782 aa) initn: 5131 init1: 5131 opt: 5131 Z-score: 5605.7 bits: 1048.1 E(): 0 Smith-Waterman score: 5131; 98.082% identity (99.872% similar) in 782 aa overlap (28-809:1-782) 10 20 30 40 50 60 mKIAA1 GLGRAADGAGGRLAWQALLATHYWTRKMTSIIKLTTLSGVQEESALCYLLQVDEFRFLLD ::::::::::::::::::::::::::::::::: gi|149 MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLD 10 20 30 70 80 90 100 110 120 mKIAA1 CGWDEHFSVDIIDSLRKHVHQIDAVLLSHPDPLHLGALPFAVGKLGLNCAIYATIPVYKM ::::::::.::::::::::::::::::::::::::::::.:::::::::::::::::::: gi|149 CGWDEHFSMDIIDSLRKHVHQIDAVLLSHPDPLHLGALPYAVGKLGLNCAIYATIPVYKM 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 GQMFMYDLYQSRHNTEDFTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GQMFMYDLYQSRHNTEDFTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGH 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 MIGGTIWKIVKDGEEEIVYAVDFNHKREIHLNGCSLEMLSRPSLLITDSFNATYVQPRRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 MIGGTIWKIVKDGEEEIVYAVDFNHKREIHLNGCSLEMLSRPSLLITDSFNATYVQPRRK 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 QRDEQLLTNVLETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVYSLALLNNVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 QRDEQLLTNVLETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVYSLALLNNVS 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA1 YNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQPDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 YNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQPDL 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA1 ECGFSRDLFIQWCQDPKNSIILTYRTTPGTLARFLIDNPTEKVTEIELRKRVKLEGKELE :::::::::::::::::::::::::::::::::::::::.::.::::::::::::::::: gi|149 ECGFSRDLFIQWCQDPKNSIILTYRTTPGTLARFLIDNPSEKITEIELRKRVKLEGKELE 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA1 EYVEKEKLKKEAAKKLEQSKEADIDSSDESDVEEDVDQPSAHKTKHDLMMKGEGSRKGSF ::.::::::::::::::::::::::::::::::::.:::::::::::::::::::::::: gi|149 EYLEKEKLKKEAAKKLEQSKEADIDSSDESDVEEDIDQPSAHKTKHDLMMKGEGSRKGSF 400 410 420 430 440 450 490 500 510 520 530 540 mKIAA1 FKQAKKSYPMFPAPEERIKWDEYGEIIKPEDFLVPELQATEEEKSKLESGLTNGEEPMDQ ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|149 FKQAKKSYPMFPAPEERIKWDEYGEIIKPEDFLVPELQATEEEKSKLESGLTNGDEPMDQ 460 470 480 490 500 510 550 560 570 580 590 600 mKIAA1 DLSDVPTKCVSATESIEIKARVTYIDYEGRSDGDSIKKIINQMKPRQLIIVHGPPEASQD :::::::::.:.:::::::::::::::::::::::::::::::::::::::::::::::: gi|149 DLSDVPTKCISTTESIEIKARVTYIDYEGRSDGDSIKKIINQMKPRQLIIVHGPPEASQD 520 530 540 550 560 570 610 620 630 640 650 660 mKIAA1 LAECCRAFGGKDIKVYMPKLHETVDATSETHIYQVRLKDSLVSSLQFCKAKDAELAWIDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LAECCRAFGGKDIKVYMPKLHETVDATSETHIYQVRLKDSLVSSLQFCKAKDAELAWIDG 580 590 600 610 620 630 670 680 690 700 710 720 mKIAA1 VLDMRVSKVDTGVILEEGELKDDGEDSEMQVDAPSDSSAMAQQKAMKSLFGEDEKELGEE ::::::::::::::::::::::::::::::::::::::..:::::::::::.:::. ::: gi|149 VLDMRVSKVDTGVILEEGELKDDGEDSEMQVDAPSDSSVLAQQKAMKSLFGDDEKDTGEE 640 650 660 670 680 690 730 740 750 760 770 780 mKIAA1 TEIIPTLEPLPPHEVPGHQSVFMNEPRLSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRT .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SEIIPTLEPLPPHEVPGHQSVFMNEPRLSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRT 700 710 720 730 740 750 790 800 mKIAA1 ETGRIGLEGCLCQDFYRIRDLLYEQYAIV ::::::::::::::::::::::::::::: gi|149 ETGRIGLEGCLCQDFYRIRDLLYEQYAIV 760 770 780 >>gi|1706103|sp|Q10568.1|CPSF2_BOVIN RecName: Full=Cleav (782 aa) initn: 5130 init1: 5130 opt: 5130 Z-score: 5604.6 bits: 1047.9 E(): 0 Smith-Waterman score: 5130; 98.210% identity (99.872% similar) in 782 aa overlap (28-809:1-782) 10 20 30 40 50 60 mKIAA1 GLGRAADGAGGRLAWQALLATHYWTRKMTSIIKLTTLSGVQEESALCYLLQVDEFRFLLD ::::::::::::::::::::::::::::::::: gi|170 MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLD 10 20 30 70 80 90 100 110 120 mKIAA1 CGWDEHFSVDIIDSLRKHVHQIDAVLLSHPDPLHLGALPFAVGKLGLNCAIYATIPVYKM ::::::::.::::::::::::::::::::::::::::::.:::::::::::::::::::: gi|170 CGWDEHFSMDIIDSLRKHVHQIDAVLLSHPDPLHLGALPYAVGKLGLNCAIYATIPVYKM 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 GQMFMYDLYQSRHNTEDFTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|170 GQMFMYDLYQSRHNTEDFTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGH 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 MIGGTIWKIVKDGEEEIVYAVDFNHKREIHLNGCSLEMLSRPSLLITDSFNATYVQPRRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|170 MIGGTIWKIVKDGEEEIVYAVDFNHKREIHLNGCSLEMLSRPSLLITDSFNATYVQPRRK 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 QRDEQLLTNVLETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVYSLALLNNVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|170 QRDEQLLTNVLETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVYSLALLNNVS 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA1 YNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQPDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|170 YNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQPDL 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA1 ECGFSRDLFIQWCQDPKNSIILTYRTTPGTLARFLIDNPTEKVTEIELRKRVKLEGKELE :::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::: gi|170 ECGFSRDLFIQWCQDPKNSIILTYRTTPGTLARFLIDNPSEKVTEIELRKRVKLEGKELE 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA1 EYVEKEKLKKEAAKKLEQSKEADIDSSDESDVEEDVDQPSAHKTKHDLMMKGEGSRKGSF ::.::::::::::::::::::::::::::::.:::.:::::::::::::::::::::::: gi|170 EYLEKEKLKKEAAKKLEQSKEADIDSSDESDAEEDIDQPSAHKTKHDLMMKGEGSRKGSF 400 410 420 430 440 450 490 500 510 520 530 540 mKIAA1 FKQAKKSYPMFPAPEERIKWDEYGEIIKPEDFLVPELQATEEEKSKLESGLTNGEEPMDQ ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|170 FKQAKKSYPMFPAPEERIKWDEYGEIIKPEDFLVPELQATEEEKSKLESGLTNGDEPMDQ 460 470 480 490 500 510 550 560 570 580 590 600 mKIAA1 DLSDVPTKCVSATESIEIKARVTYIDYEGRSDGDSIKKIINQMKPRQLIIVHGPPEASQD :::::::::.:.:::::::::::::::::::::::::::::::::::::::::::::::: gi|170 DLSDVPTKCISTTESIEIKARVTYIDYEGRSDGDSIKKIINQMKPRQLIIVHGPPEASQD 520 530 540 550 560 570 610 620 630 640 650 660 mKIAA1 LAECCRAFGGKDIKVYMPKLHETVDATSETHIYQVRLKDSLVSSLQFCKAKDAELAWIDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|170 LAECCRAFGGKDIKVYMPKLHETVDATSETHIYQVRLKDSLVSSLQFCKAKDAELAWIDG 580 590 600 610 620 630 670 680 690 700 710 720 mKIAA1 VLDMRVSKVDTGVILEEGELKDDGEDSEMQVDAPSDSSAMAQQKAMKSLFGEDEKELGEE ::::::::::::::::::::::::::::::::::::::..:::::::::::.:::: ::: gi|170 VLDMRVSKVDTGVILEEGELKDDGEDSEMQVDAPSDSSVIAQQKAMKSLFGDDEKETGEE 640 650 660 670 680 690 730 740 750 760 770 780 mKIAA1 TEIIPTLEPLPPHEVPGHQSVFMNEPRLSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRT .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|170 SEIIPTLEPLPPHEVPGHQSVFMNEPRLSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRT 700 710 720 730 740 750 790 800 mKIAA1 ETGRIGLEGCLCQDFYRIRDLLYEQYAIV ::::::::::::::::::::::::::::: gi|170 ETGRIGLEGCLCQDFYRIRDLLYEQYAIV 760 770 780 >>gi|73962293|ref|XP_537353.2| PREDICTED: similar to cle (782 aa) initn: 5128 init1: 5128 opt: 5128 Z-score: 5602.4 bits: 1047.5 E(): 0 Smith-Waterman score: 5128; 98.082% identity (99.744% similar) in 782 aa overlap (28-809:1-782) 10 20 30 40 50 60 mKIAA1 GLGRAADGAGGRLAWQALLATHYWTRKMTSIIKLTTLSGVQEESALCYLLQVDEFRFLLD ::::::::::::::::::::::::::::::::: gi|739 MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLD 10 20 30 70 80 90 100 110 120 mKIAA1 CGWDEHFSVDIIDSLRKHVHQIDAVLLSHPDPLHLGALPFAVGKLGLNCAIYATIPVYKM ::::::::.::::::::::::::::::::::::::::::.:::::::::::::::::::: gi|739 CGWDEHFSMDIIDSLRKHVHQIDAVLLSHPDPLHLGALPYAVGKLGLNCAIYATIPVYKM 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 GQMFMYDLYQSRHNTEDFTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 GQMFMYDLYQSRHNTEDFTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGH 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 MIGGTIWKIVKDGEEEIVYAVDFNHKREIHLNGCSLEMLSRPSLLITDSFNATYVQPRRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 MIGGTIWKIVKDGEEEIVYAVDFNHKREIHLNGCSLEMLSRPSLLITDSFNATYVQPRRK 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 QRDEQLLTNVLETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVYSLALLNNVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 QRDEQLLTNVLETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVYSLALLNNVS 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA1 YNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQPDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 YNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQPDL 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA1 ECGFSRDLFIQWCQDPKNSIILTYRTTPGTLARFLIDNPTEKVTEIELRKRVKLEGKELE :::::::::::::::::::::::::::::::::::::::.::.::::::::::::::::: gi|739 ECGFSRDLFIQWCQDPKNSIILTYRTTPGTLARFLIDNPSEKITEIELRKRVKLEGKELE 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA1 EYVEKEKLKKEAAKKLEQSKEADIDSSDESDVEEDVDQPSAHKTKHDLMMKGEGSRKGSF ::.::::::::::::::::::::::::::::::::.::::::: :::::::::::::::: gi|739 EYLEKEKLKKEAAKKLEQSKEADIDSSDESDVEEDIDQPSAHKMKHDLMMKGEGSRKGSF 400 410 420 430 440 450 490 500 510 520 530 540 mKIAA1 FKQAKKSYPMFPAPEERIKWDEYGEIIKPEDFLVPELQATEEEKSKLESGLTNGEEPMDQ ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|739 FKQAKKSYPMFPAPEERIKWDEYGEIIKPEDFLVPELQATEEEKSKLESGLTNGDEPMDQ 460 470 480 490 500 510 550 560 570 580 590 600 mKIAA1 DLSDVPTKCVSATESIEIKARVTYIDYEGRSDGDSIKKIINQMKPRQLIIVHGPPEASQD :::::::::.:.:::::::::::::::::::::::::::::::::::::::::::::::: gi|739 DLSDVPTKCISTTESIEIKARVTYIDYEGRSDGDSIKKIINQMKPRQLIIVHGPPEASQD 520 530 540 550 560 570 610 620 630 640 650 660 mKIAA1 LAECCRAFGGKDIKVYMPKLHETVDATSETHIYQVRLKDSLVSSLQFCKAKDAELAWIDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 LAECCRAFGGKDIKVYMPKLHETVDATSETHIYQVRLKDSLVSSLQFCKAKDAELAWIDG 580 590 600 610 620 630 670 680 690 700 710 720 mKIAA1 VLDMRVSKVDTGVILEEGELKDDGEDSEMQVDAPSDSSAMAQQKAMKSLFGEDEKELGEE ::::::::::::::::::::::::::::::::::::::..:::::::::::.:::: ::: gi|739 VLDMRVSKVDTGVILEEGELKDDGEDSEMQVDAPSDSSVIAQQKAMKSLFGDDEKETGEE 640 650 660 670 680 690 730 740 750 760 770 780 mKIAA1 TEIIPTLEPLPPHEVPGHQSVFMNEPRLSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRT .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SEIIPTLEPLPPHEVPGHQSVFMNEPRLSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRT 700 710 720 730 740 750 790 800 mKIAA1 ETGRIGLEGCLCQDFYRIRDLLYEQYAIV ::::::::::::::::::::::::::::: gi|739 ETGRIGLEGCLCQDFYRIRDLLYEQYAIV 760 770 780 >>gi|51338827|sp|Q9P2I0.2|CPSF2_HUMAN RecName: Full=Clea (782 aa) initn: 5127 init1: 5127 opt: 5127 Z-score: 5601.3 bits: 1047.3 E(): 0 Smith-Waterman score: 5127; 97.954% identity (99.872% similar) in 782 aa overlap (28-809:1-782) 10 20 30 40 50 60 mKIAA1 GLGRAADGAGGRLAWQALLATHYWTRKMTSIIKLTTLSGVQEESALCYLLQVDEFRFLLD ::::::::::::::::::::::::::::::::: gi|513 MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLD 10 20 30 70 80 90 100 110 120 mKIAA1 CGWDEHFSVDIIDSLRKHVHQIDAVLLSHPDPLHLGALPFAVGKLGLNCAIYATIPVYKM ::::::::.::::::::::::::::::::::::::::::.:::::::::::::::::::: gi|513 CGWDEHFSMDIIDSLRKHVHQIDAVLLSHPDPLHLGALPYAVGKLGLNCAIYATIPVYKM 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 GQMFMYDLYQSRHNTEDFTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|513 GQMFMYDLYQSRHNTEDFTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGH 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 MIGGTIWKIVKDGEEEIVYAVDFNHKREIHLNGCSLEMLSRPSLLITDSFNATYVQPRRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|513 MIGGTIWKIVKDGEEEIVYAVDFNHKREIHLNGCSLEMLSRPSLLITDSFNATYVQPRRK 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 QRDEQLLTNVLETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVYSLALLNNVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|513 QRDEQLLTNVLETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVYSLALLNNVS 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA1 YNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQPDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|513 YNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQPDL 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA1 ECGFSRDLFIQWCQDPKNSIILTYRTTPGTLARFLIDNPTEKVTEIELRKRVKLEGKELE :::::::::::::::::::::::::::::::::::::::.::.::::::::::::::::: gi|513 ECGFSRDLFIQWCQDPKNSIILTYRTTPGTLARFLIDNPSEKITEIELRKRVKLEGKELE 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA1 EYVEKEKLKKEAAKKLEQSKEADIDSSDESDVEEDVDQPSAHKTKHDLMMKGEGSRKGSF ::.::::::::::::::::::::::::::::.:::.:::::::::::::::::::::::: gi|513 EYLEKEKLKKEAAKKLEQSKEADIDSSDESDIEEDIDQPSAHKTKHDLMMKGEGSRKGSF 400 410 420 430 440 450 490 500 510 520 530 540 mKIAA1 FKQAKKSYPMFPAPEERIKWDEYGEIIKPEDFLVPELQATEEEKSKLESGLTNGEEPMDQ ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|513 FKQAKKSYPMFPAPEERIKWDEYGEIIKPEDFLVPELQATEEEKSKLESGLTNGDEPMDQ 460 470 480 490 500 510 550 560 570 580 590 600 mKIAA1 DLSDVPTKCVSATESIEIKARVTYIDYEGRSDGDSIKKIINQMKPRQLIIVHGPPEASQD :::::::::.:.:::::::::::::::::::::::::::::::::::::::::::::::: gi|513 DLSDVPTKCISTTESIEIKARVTYIDYEGRSDGDSIKKIINQMKPRQLIIVHGPPEASQD 520 530 540 550 560 570 610 620 630 640 650 660 mKIAA1 LAECCRAFGGKDIKVYMPKLHETVDATSETHIYQVRLKDSLVSSLQFCKAKDAELAWIDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|513 LAECCRAFGGKDIKVYMPKLHETVDATSETHIYQVRLKDSLVSSLQFCKAKDAELAWIDG 580 590 600 610 620 630 670 680 690 700 710 720 mKIAA1 VLDMRVSKVDTGVILEEGELKDDGEDSEMQVDAPSDSSAMAQQKAMKSLFGEDEKELGEE :::::::::::::::::::::::::::::::.::::::..:::::::::::.:::: ::: gi|513 VLDMRVSKVDTGVILEEGELKDDGEDSEMQVEAPSDSSVIAQQKAMKSLFGDDEKETGEE 640 650 660 670 680 690 730 740 750 760 770 780 mKIAA1 TEIIPTLEPLPPHEVPGHQSVFMNEPRLSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRT .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|513 SEIIPTLEPLPPHEVPGHQSVFMNEPRLSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRT 700 710 720 730 740 750 790 800 mKIAA1 ETGRIGLEGCLCQDFYRIRDLLYEQYAIV ::::::::::::::::::::::::::::: gi|513 ETGRIGLEGCLCQDFYRIRDLLYEQYAIV 760 770 780 >>gi|47125306|gb|AAH70095.1| Cleavage and polyadenylatio (782 aa) initn: 5115 init1: 5115 opt: 5115 Z-score: 5588.2 bits: 1044.9 E(): 0 Smith-Waterman score: 5115; 97.698% identity (99.744% similar) in 782 aa overlap (28-809:1-782) 10 20 30 40 50 60 mKIAA1 GLGRAADGAGGRLAWQALLATHYWTRKMTSIIKLTTLSGVQEESALCYLLQVDEFRFLLD ::::::::::::::::::::::::::::::::: gi|471 MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLD 10 20 30 70 80 90 100 110 120 mKIAA1 CGWDEHFSVDIIDSLRKHVHQIDAVLLSHPDPLHLGALPFAVGKLGLNCAIYATIPVYKM ::::::::.::::::::::::::::::::::::::::::.:::::::::::::::::::: gi|471 CGWDEHFSMDIIDSLRKHVHQIDAVLLSHPDPLHLGALPYAVGKLGLNCAIYATIPVYKM 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 GQMFMYDLYQSRHNTEDFTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|471 GQMFMYDLYQSRHNTEDFTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGH 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 MIGGTIWKIVKDGEEEIVYAVDFNHKREIHLNGCSLEMLSRPSLLITDSFNATYVQPRRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|471 MIGGTIWKIVKDGEEEIVYAVDFNHKREIHLNGCSLEMLSRPSLLITDSFNATYVQPRRK 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 QRDEQLLTNVLETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVYSLALLNNVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|471 QRDEQLLTNVLETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVYSLALLNNVS 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA1 YNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQPDL ::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::: gi|471 YNVVEFSKSQVEWMSGKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQPDL 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA1 ECGFSRDLFIQWCQDPKNSIILTYRTTPGTLARFLIDNPTEKVTEIELRKRVKLEGKELE :::::::::::::::::::::::::::::::::::::::.::.::::::::::::::::: gi|471 ECGFSRDLFIQWCQDPKNSIILTYRTTPGTLARFLIDNPSEKITEIELRKRVKLEGKELE 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA1 EYVEKEKLKKEAAKKLEQSKEADIDSSDESDVEEDVDQPSAHKTKHDLMMKGEGSRKGSF ::.::::::::::::::::::::::::::::.:::.:::::::::::::::::::::::: gi|471 EYLEKEKLKKEAAKKLEQSKEADIDSSDESDIEEDIDQPSAHKTKHDLMMKGEGSRKGSF 400 410 420 430 440 450 490 500 510 520 530 540 mKIAA1 FKQAKKSYPMFPAPEERIKWDEYGEIIKPEDFLVPELQATEEEKSKLESGLTNGEEPMDQ ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|471 FKQAKKSYPMFPAPEERIKWDEYGEIIKPEDFLVPELQATEEEKSKLESGLTNGDEPMDQ 460 470 480 490 500 510 550 560 570 580 590 600 mKIAA1 DLSDVPTKCVSATESIEIKARVTYIDYEGRSDGDSIKKIINQMKPRQLIIVHGPPEASQD :::::::::.:.:::::::::::::::::::::::::::::::::::::::::::::::: gi|471 DLSDVPTKCISTTESIEIKARVTYIDYEGRSDGDSIKKIINQMKPRQLIIVHGPPEASQD 520 530 540 550 560 570 610 620 630 640 650 660 mKIAA1 LAECCRAFGGKDIKVYMPKLHETVDATSETHIYQVRLKDSLVSSLQFCKAKDAELAWIDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|471 LAECCRAFGGKDIKVYMPKLHETVDATSETHIYQVRLKDSLVSSLQFCKAKDAELAWIDG 580 590 600 610 620 630 670 680 690 700 710 720 mKIAA1 VLDMRVSKVDTGVILEEGELKDDGEDSEMQVDAPSDSSAMAQQKAMKSLFGEDEKELGEE ::::::::::::::::::::.::::::::::.::::::..:::::::::::.:::: ::: gi|471 VLDMRVSKVDTGVILEEGELRDDGEDSEMQVEAPSDSSVIAQQKAMKSLFGDDEKETGEE 640 650 660 670 680 690 730 740 750 760 770 780 mKIAA1 TEIIPTLEPLPPHEVPGHQSVFMNEPRLSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRT .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|471 SEIIPTLEPLPPHEVPGHQSVFMNEPRLSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRT 700 710 720 730 740 750 790 800 mKIAA1 ETGRIGLEGCLCQDFYRIRDLLYEQYAIV ::::::::::::::::::::::::::::: gi|471 ETGRIGLEGCLCQDFYRIRDLLYEQYAIV 760 770 780 >>gi|126282067|ref|XP_001365312.1| PREDICTED: similar to (782 aa) initn: 5105 init1: 5105 opt: 5105 Z-score: 5577.3 bits: 1042.8 E(): 0 Smith-Waterman score: 5105; 97.570% identity (99.616% similar) in 782 aa overlap (28-809:1-782) 10 20 30 40 50 60 mKIAA1 GLGRAADGAGGRLAWQALLATHYWTRKMTSIIKLTTLSGVQEESALCYLLQVDEFRFLLD ::::::::::::::::::::::::::::::::: gi|126 MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLD 10 20 30 70 80 90 100 110 120 mKIAA1 CGWDEHFSVDIIDSLRKHVHQIDAVLLSHPDPLHLGALPFAVGKLGLNCAIYATIPVYKM ::::::::.::::::::::::.:::::::::::::::::.:::::::::::::::::::: gi|126 CGWDEHFSMDIIDSLRKHVHQVDAVLLSHPDPLHLGALPYAVGKLGLNCAIYATIPVYKM 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 GQMFMYDLYQSRHNTEDFTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 GQMFMYDLYQSRHNTEDFTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGH 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 MIGGTIWKIVKDGEEEIVYAVDFNHKREIHLNGCSLEMLSRPSLLITDSFNATYVQPRRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 MIGGTIWKIVKDGEEEIVYAVDFNHKREIHLNGCSLEMLSRPSLLITDSFNATYVQPRRK 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 QRDEQLLTNVLETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVYSLALLNNVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 QRDEQLLTNVLETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVYSLALLNNVS 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA1 YNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQPDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 YNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQPDL 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA1 ECGFSRDLFIQWCQDPKNSIILTYRTTPGTLARFLIDNPTEKVTEIELRKRVKLEGKELE ::::::::::::::: :::::::::::::::::::::::.::.::::::::::::::::: gi|126 ECGFSRDLFIQWCQDSKNSIILTYRTTPGTLARFLIDNPSEKITEIELRKRVKLEGKELE 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA1 EYVEKEKLKKEAAKKLEQSKEADIDSSDESDVEEDVDQPSAHKTKHDLMMKGEGSRKGSF ::.::::::::::::::::::::::::::::::::.:::::::::::::::::::::::: gi|126 EYLEKEKLKKEAAKKLEQSKEADIDSSDESDVEEDIDQPSAHKTKHDLMMKGEGSRKGSF 400 410 420 430 440 450 490 500 510 520 530 540 mKIAA1 FKQAKKSYPMFPAPEERIKWDEYGEIIKPEDFLVPELQATEEEKSKLESGLTNGEEPMDQ ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|126 FKQAKKSYPMFPAPEERIKWDEYGEIIKPEDFLVPELQATEEEKSKLESGLTNGDEPMDQ 460 470 480 490 500 510 550 560 570 580 590 600 mKIAA1 DLSDVPTKCVSATESIEIKARVTYIDYEGRSDGDSIKKIINQMKPRQLIIVHGPPEASQD :::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 DLSDVPTKCISATESIEIKARVTYIDYEGRSDGDSIKKIINQMKPRQLIIVHGPPEASQD 520 530 540 550 560 570 610 620 630 640 650 660 mKIAA1 LAECCRAFGGKDIKVYMPKLHETVDATSETHIYQVRLKDSLVSSLQFCKAKDAELAWIDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 LAECCRAFGGKDIKVYMPKLHETVDATSETHIYQVRLKDSLVSSLQFCKAKDAELAWIDG 580 590 600 610 620 630 670 680 690 700 710 720 mKIAA1 VLDMRVSKVDTGVILEEGELKDDGEDSEMQVDAPSDSSAMAQQKAMKSLFGEDEKELGEE ::::::::::::::::::::::::::::::::.:::.:..:::::::::::.:.:: ::: gi|126 VLDMRVSKVDTGVILEEGELKDDGEDSEMQVDTPSDASVIAQQKAMKSLFGDDDKETGEE 640 650 660 670 680 690 730 740 750 760 770 780 mKIAA1 TEIIPTLEPLPPHEVPGHQSVFMNEPRLSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRT .:::::::::::::::::::::::::::::::::::::::::::::::::::: :::::: gi|126 SEIIPTLEPLPPHEVPGHQSVFMNEPRLSDFKQVLLREGIQAEFVGGVLVCNNLVAVRRT 700 710 720 730 740 750 790 800 mKIAA1 ETGRIGLEGCLCQDFYRIRDLLYEQYAIV ::::::::::::::::::::::::::::: gi|126 ETGRIGLEGCLCQDFYRIRDLLYEQYAIV 760 770 780 >>gi|149531954|ref|XP_001507374.1| PREDICTED: similar to (782 aa) initn: 5097 init1: 5097 opt: 5097 Z-score: 5568.5 bits: 1041.2 E(): 0 Smith-Waterman score: 5097; 97.187% identity (99.616% similar) in 782 aa overlap (28-809:1-782) 10 20 30 40 50 60 mKIAA1 GLGRAADGAGGRLAWQALLATHYWTRKMTSIIKLTTLSGVQEESALCYLLQVDEFRFLLD ::::::::::::::::::::::::::::::::: gi|149 MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLD 10 20 30 70 80 90 100 110 120 mKIAA1 CGWDEHFSVDIIDSLRKHVHQIDAVLLSHPDPLHLGALPFAVGKLGLNCAIYATIPVYKM ::::::::.::::::.:::::.:::::::::::::::::.:::::::::::::::::::: gi|149 CGWDEHFSMDIIDSLKKHVHQVDAVLLSHPDPLHLGALPYAVGKLGLNCAIYATIPVYKM 40 50 60 70 80 90 130 140 150 160 170 180 mKIAA1 GQMFMYDLYQSRHNTEDFTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GQMFMYDLYQSRHNTEDFTLFTLDDVDAAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGH 100 110 120 130 140 150 190 200 210 220 230 240 mKIAA1 MIGGTIWKIVKDGEEEIVYAVDFNHKREIHLNGCSLEMLSRPSLLITDSFNATYVQPRRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 MIGGTIWKIVKDGEEEIVYAVDFNHKREIHLNGCSLEMLSRPSLLITDSFNATYVQPRRK 160 170 180 190 200 210 250 260 270 280 290 300 mKIAA1 QRDEQLLTNVLETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVYSLALLNNVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 QRDEQLLTNVLETLRGDGNVLIAVDTAGRVLELAQLLDQIWRTKDAGLGVYSLALLNNVS 220 230 240 250 260 270 310 320 330 340 350 360 mKIAA1 YNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQPDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 YNVVEFSKSQVEWMSDKLMRCFEDKRNNPFQFRHLSLCHGLSDLARVPSPKVVLASQPDL 280 290 300 310 320 330 370 380 390 400 410 420 mKIAA1 ECGFSRDLFIQWCQDPKNSIILTYRTTPGTLARFLIDNPTEKVTEIELRKRVKLEGKELE :::::::::::::::::::::::::::::::::::::::.::.::::::::::::::::: gi|149 ECGFSRDLFIQWCQDPKNSIILTYRTTPGTLARFLIDNPSEKITEIELRKRVKLEGKELE 340 350 360 370 380 390 430 440 450 460 470 480 mKIAA1 EYVEKEKLKKEAAKKLEQSKEADIDSSDESDVEEDVDQPSAHKTKHDLMMKGEGSRKGSF ::.::::::::::::::::::::::::::::::::.:::::::::::::::::::::::: gi|149 EYLEKEKLKKEAAKKLEQSKEADIDSSDESDVEEDIDQPSAHKTKHDLMMKGEGSRKGSF 400 410 420 430 440 450 490 500 510 520 530 540 mKIAA1 FKQAKKSYPMFPAPEERIKWDEYGEIIKPEDFLVPELQATEEEKSKLESGLTNGEEPMDQ :::::::::::::::::::::::::::::::::::::::.::::::::::::::.::::: gi|149 FKQAKKSYPMFPAPEERIKWDEYGEIIKPEDFLVPELQAAEEEKSKLESGLTNGDEPMDQ 460 470 480 490 500 510 550 560 570 580 590 600 mKIAA1 DLSDVPTKCVSATESIEIKARVTYIDYEGRSDGDSIKKIINQMKPRQLIIVHGPPEASQD :::::::::.:.:::.:::::::::::::::::::::::::::::::::::::::::::: gi|149 DLSDVPTKCISTTESLEIKARVTYIDYEGRSDGDSIKKIINQMKPRQLIIVHGPPEASQD 520 530 540 550 560 570 610 620 630 640 650 660 mKIAA1 LAECCRAFGGKDIKVYMPKLHETVDATSETHIYQVRLKDSLVSSLQFCKAKDAELAWIDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LAECCRAFGGKDIKVYMPKLHETVDATSETHIYQVRLKDSLVSSLQFCKAKDAELAWIDG 580 590 600 610 620 630 670 680 690 700 710 720 mKIAA1 VLDMRVSKVDTGVILEEGELKDDGEDSEMQVDAPSDSSAMAQQKAMKSLFGEDEKELGEE :::::::::::::::::::::::::.:::::: :::::..:::::::::::.:.:: ::: gi|149 VLDMRVSKVDTGVILEEGELKDDGEESEMQVDPPSDSSTLAQQKAMKSLFGDDDKETGEE 640 650 660 670 680 690 730 740 750 760 770 780 mKIAA1 TEIIPTLEPLPPHEVPGHQSVFMNEPRLSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRT .:::::::::::::::::::::::::::::::::::::::::::::::::::: :::::: gi|149 SEIIPTLEPLPPHEVPGHQSVFMNEPRLSDFKQVLLREGIQAEFVGGVLVCNNLVAVRRT 700 710 720 730 740 750 790 800 mKIAA1 ETGRIGLEGCLCQDFYRIRDLLYEQYAIV ::::::::::::::::::::::::::::: gi|149 ETGRIGLEGCLCQDFYRIRDLLYEQYAIV 760 770 780 809 residues in 1 query sequences 2727779818 residues in 7921681 library sequences Tcomplib [34.26] (2 proc) start: Fri Mar 13 22:49:25 2009 done: Fri Mar 13 22:57:48 2009 Total Scan time: 1103.800 Total Display time: 0.370 Function used was FASTA [version 34.26.5 April 26, 2007]