FASTA searches a protein or DNA sequence data bank version 3.4t11 Apr 17, 2002 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ../query/mKIAA0075.ptfa, 321 aa vs ./tmplib.26680 library 1768696 residues in 2168 sequences Expectation_n fit: rho(ln(x))= 6.0854+/-0.00515; mu= 7.2772+/- 0.344 mean_var=119.3309+/-27.305, 0's: 0 Z-trim: 1 B-trim: 0 in 0/36 Lambda= 0.1174 FASTA (3.45 Mar 2002) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2168) mKIAA4009 ( 381 res) mnh05011 ( 381) 791 144 9.3e-36 >>mKIAA4009 ( 381 res) mnh05011 (381 aa) initn: 887 init1: 400 opt: 791 Z-score: 734.3 bits: 144.4 E(): 9.3e-36 Smith-Waterman score: 864; 45.217% identity (49.840% ungapped) in 345 aa overlap (2-318:41-381) 10 20 30 mKIAA0 GESGHQYLSDGLKTPKGKGRAALRSPDSPKK :. ::::. . .:.:: .. :: . mKIAA4 FELMSAGLLQNLWLGSAHSCLLEVKRRLDLETDHQYLAGSSGPFRGRGRHPGKGVKSPGE 20 30 40 50 60 70 40 50 60 70 80 90 mKIAA0 KTRYDTSLGLLTKKFIQLLSQSPDGVLDLNKAAEVLKVQKRRIYDITNVLEGIHLIKKKS :.::.:::.: ::.:..:::.: :::.::: ::::::::::::::::::::::.:: ::: mKIAA4 KSRYETSLNLTTKRFLELLSRSADGVVDLNWAAEVLKVQKRRIYDITNVLEGIQLIAKKS 80 90 100 110 120 130 100 110 120 130 140 150 mKIAA0 KNNVQWMGCSLSEDGGMLAQCQGLSKEVTELSQEEKKLDELIQSCTLDLKLLTEDSENQR ::..::.: :. . .::.... .:.. :..::.:.. :: .:.::.:::..:: mKIAA4 KNHIQWLGSHTMV--GIGKRLEGLTQDLQQLQESEQQLDHLMHICTTQLQLLSEDSDTQR 140 150 160 170 180 160 170 180 190 200 210 mKIAA0 LAYVTYQDIRKISGLKDQTVIVVKAPPETRLEVPDSIESLQIHLASTQGPIEVYLCPEET ::::: ::.:.:. .: :::.::::::.:.. :: :..:: : : ::::.:.:::::. mKIAA4 LAYVTCQDLRSIADPAEQMVIVIKAPPETQLQAVDSSETFQISLKSKQGPIDVFLCPEES 190 200 210 220 230 240 220 230 240 mKIAA0 -ETHRPMKTNNQDHN------------GNIPKPTSKDLASNNS---------------GH . : ::. :. . : :.: : . : . : :: mKIAA4 ADGISPGKTSCQETSSGEDRTADSGPAGPPPSPPSTSPALDPSQSLLGLEQEAVLPRMGH 250 260 270 280 290 300 250 260 270 280 290 300 mKIAA0 SDCSVSTANLSPLASPANLLQQTEDQIPSNLEGPFVNLLPPLLQEDYLLSLGEEEGISDL . .::::.. .::....... . : : :..: :: :: ..: : ::: :: mKIAA4 LRVPMEEDQLSPLVAADSLLEHVKEDFSGLLPGEFISLSPPHEALDYHFGLEEGEGIRDL 310 320 330 340 350 360 310 320 mKIAA0 FDAYDLEKLPLVEDFMCS :: . :: :: mKIAA4 FDCDFGDLTPL--DF 370 380 321 residues in 1 query sequences 1768696 residues in 2168 library sequences Scomplib [34t11] start: Mon Mar 27 10:11:42 2006 done: Mon Mar 27 10:11:43 2006 Scan time: 0.550 Display time: 0.010 Function used was FASTA [version 3.4t11 Apr 17, 2002]