Comparison of KIAA cDNA sequences between mouse and human (FLJ00241)

<< Original sequence data >>

mouse  mFLJ00241 (mpm05008)     length:   5210 bp
human     (sj07515)     length:   4437 bp


<< Aligned sequence information (excl. stop, if exists.) >>

----------------------------------------------------------
            length    #match  #mismatch   %diff
----------------------------------------------------------
DNA

  CDS1 :      264       203       61      23.11
  CDS2 :      372       298       74      19.89
  CDS3 :      849       734      115      13.55
  Total:     1485      1235      250      16.84

amino acid

  CDS1 :       88        62       26      29.55
  CDS2 :      124        97       27      21.77
  CDS3 :      283       255       28       9.89
  Total:      495       414       81      16.36
----------------------------------------------------------


<< Alignment region (incl. stop, if exists.) >>

----------------------------------------------------------
                    cDNA      cDNA original    amino acid
----------------------------------------------------------
  CDS1 : mouse   713 -   976    311 -  1156    135 -   222
         human  1246 -  1509   1123 -  1683     42 -   129
  CDS2 : mouse  1659 -  2030   1641 -  2048      1 -   124
         human  1709 -  2080   1508 -  2332     68 -   191
  CDS3 : mouse  3526 -  4374   3343 -  4713      1 -   283
         human  2292 -  3140   2289 -  3146      2 -   284
----------------------------------------------------------


<< Alignment >>

*--[ CDS1 ]--*
             1 ----+----*----+----*----+----*----+----*----+----* 50
           135 P  L  T  M  V  Y  V  P  D  G  G  Y  S  Y  M  T  T  151
mpm05008   713 CCCCTCACAATGGTGTATGTCCCTGACGGCGGCTACAGCTACATGACGAC 762
               ||   |      |  |||||| |   |||| ||||||||||||||||  |
sj07515   1246 CCGGCCTGTCCAGCCTATGTCTCCAGCGGCAGCTACAGCTACATGACCTC 1295
            42 P  A  C  P  A  Y  V  S  S  G  S  Y  S  Y  M  T  S  58

            51 ----+----*----+----*----+----*----+----*----+----* 100
           152  D  A  T  E  F  L  H  R  L  T  M  P  G  V  A  V  A 168
mpm05008   763 TGATGCCACCGAGTTCCTGCACAGACTCACGATGCCTGGAGTAGCTGTGG 812
                   ||||  |||||||||| ||| |||||  | || || |   ||| ||
sj07515   1296 CTCAGCCAGTGAGTTCCTGCTCAGCCTCACACTCCCCGGGGCTCCTGGGG 1345
            59  S  A  S  E  F  L  L  S  L  T  L  P  G  A  P  G  A 75

           101 ----+----*----+----*----+----*----+----*----+----* 150
           169   Q  I  V  H  S  Q  V  E  E  P  Q  L  L  E  A  T   184
mpm05008   813 CACAGATTGTTCACTCCCAGGTGGAGGAGCCACAGCTGCTAGAGGCTACG 862
               | |||||||| |||||||||||||||||||  ||||| || | |||   |
sj07515   1346 CCCAGATTGTGCACTCCCAGGTGGAGGAGCAGCAGCTTCTGGCGGCCGGG 1395
            76   Q  I  V  H  S  Q  V  E  E  Q  Q  L  L  A  A  G   91

           151 ----+----*----+----*----+----*----+----*----+----* 200
           185 C  S  V  V  S  C  L  L  E  G  P  V  H  L  G  P  R  201
mpm05008   863 TGCTCGGTGGTCAGCTGCCTGCTCGAGGGCCCTGTGCACCTGGGGCCTCG 912
                |||| ||||||||||||||||| ||||||||||| || ||||| ||| |
sj07515   1396 AGCTCTGTGGTCAGCTGCCTGCTGGAGGGCCCTGTCCAGCTGGGTCCTGG 1445
            92 S  S  V  V  S  C  L  L  E  G  P  V  Q  L  G  P  G  108

           201 ----+----*----+----*----+----*----+----*----+----* 250
           202  S  V  L  Q  H  C  H  L  R  G  P  I  R  I  G  A  G 218
mpm05008   913 AAGTGTCCTGCAGCACTGTCACCTGAGGGGCCCCATTCGCATCGGCGCTG 962
                || |||||||||||||| ||||||  ||||||||||| ||| |||||||
sj07515   1446 GAGCGTCCTGCAGCACTGCCACCTGCAGGGCCCCATTCACATAGGCGCTG 1495
           109  S  V  L  Q  H  C  H  L  Q  G  P  I  H  I  G  A  G 125

           251 ----+----*---- 264
           219   C  F  V  S   222
mpm05008   963 GCTGCTTTGTGAGT 976
               ||||||| |||| |
sj07515   1496 GCTGCTTGGTGACT 1509
           126   C  L  V  T   129



*--[ CDS2 ]--*
             1 ----+----*----+----*----+----*----+----*----+----* 50
             1 R  D  W  D  L  W  D  P  D  T  P  P  S  D  R  C  L  17
mpm05008  1659 AGAGACTGGGACCTGTGGGACCCAGATACACCCCCCTCAGATCGATGCCT 1708
                ||| |||||||||||||||||| || || |  ||| ||||    |||||
sj07515   1709 CGAGCCTGGGACCTGTGGGACCCCGAGACGCTGCCCGCAGAGTACTGCCT 1758
            68 R  A  W  D  L  W  D  P  E  T  L  P  A  E  Y  C  L  84

            51 ----+----*----+----*----+----*----+----*----+----* 100
            18  L  T  A  R  L  F  P  V  L  H  P  T  R  A  L  G  P 34
mpm05008  1709 CCTCACTGCCCGCCTTTTCCCTGTGCTCCACCCCACGAGGGCCCTGGGGC 1758
                | ||  |||||||| || ||||||||||||||| ||||||  ||||| |
sj07515   1759 TCCCAGCGCCCGCCTCTTTCCTGTGCTCCACCCCTCGAGGGAGCTGGGAC 1808
            85  P  S  A  R  L  F  P  V  L  H  P  S  R  E  L  G  P 101

           101 ----+----*----+----*----+----*----+----*----+----* 150
            35   Q  D  V  L  W  M  L  H  P  R  K  H  R  G  E  A   50
mpm05008  1759 CCCAGGATGTGCTGTGGATGCTGCACCCCCGCAAACACAGAGGTGAGGCC 1808
               |||||||  |||||||||||||| ||| ||   |  |  | || ||||||
sj07515   1809 CCCAGGACCTGCTGTGGATGCTGGACCACCAGGAGGATGGGGGCGAGGCC 1858
           102   Q  D  L  L  W  M  L  D  H  Q  E  D  G  G  E  A   117

           151 ----+----*----+----*----+----*----+----*----+----* 200
            51 L  R  A  W  R  A  S  W  R  L  S  W  E  Q  L  Q  P  67
mpm05008  1809 CTTCGGGCCTGGCGAGCCTCCTGGCGTCTGTCCTGGGAGCAGCTGCAACC 1858
               || || |||||||| ||||||||||| |||||||||||||||||||| ||
sj07515   1859 CTGCGAGCCTGGCGGGCCTCCTGGCGCCTGTCCTGGGAGCAGCTGCAGCC 1908
           118 L  R  A  W  R  A  S  W  R  L  S  W  E  Q  L  Q  P  134

           201 ----+----*----+----*----+----*----+----*----+----* 250
            68  C  V  D  R  A  A  T  L  D  F  R  R  D  L  F  F  C 84
mpm05008  1859 TTGTGTGGACCGGGCTGCCACACTGGACTTCCGCCGAGATCTGTTCTTCT 1908
                ||  |||| ||||||||||| |||| ||  ||||| || ||||||||| 
sj07515   1909 GTGCCTGGATCGGGCTGCCACGCTGGCCTCTCGCCGGGACCTGTTCTTCC 1958
           135  C  L  D  R  A  A  T  L  A  S  R  R  D  L  F  F  R 151

           251 ----+----*----+----*----+----*----+----*----+----* 300
            85   Q  A  L  Q  K  A  R  H  V  L  E  A  R  Q  D  L   100
mpm05008  1909 GCCAGGCCTTGCAGAAGGCAAGGCATGTGTTAGAGGCGCGGCAGGACCTC 1958
               |||||||| |||| |||||  |||| ||| | ||||| ||||||||||||
sj07515   1959 GCCAGGCCCTGCATAAGGCGCGGCACGTGCTGGAGGCCCGGCAGGACCTC 2008
           152   Q  A  L  H  K  A  R  H  V  L  E  A  R  Q  D  L   167

           301 ----+----*----+----*----+----*----+----*----+----* 350
           101 C  L  R  P  L  I  R  A  A  V  G  E  G  C  S  G  P  117
mpm05008  1959 TGCCTACGTCCACTGATCCGGGCCGCTGTCGGGGAAGGTTGCTCTGGGCC 2008
                |||| || || |||||| |||| |||||| | || || ||| | |||||
sj07515   2009 AGCCTGCGCCCGCTGATCTGGGCTGCTGTCCGCGAGGGCTGCCCCGGGCC 2058
           168 S  L  R  P  L  I  W  A  A  V  R  E  G  C  P  G  P  184

           351 ----+----*----+----*-- 372
           118  L  L  A  T  L  D  K   124
mpm05008  2009 CCTGCTGGCCACACTTGACAAG 2030
               |||||||||||| || ||| ||
sj07515   2059 CCTGCTGGCCACGCTGGACCAG 2080
           185  L  L  A  T  L  D  Q   191



*--[ CDS3 ]--*
             1 ----+----*----+----*----+----*----+----*----+----* 50
             1 Q  P  V  E  L  P  A  P  G  Q  W  V  V  T  E  C  P  17
mpm05008  3526 CAGCCCGTGGAGCTGCCCGCACCCGGGCAGTGGGTGGTGACTGAGTGCCC 3575
                |||  ||||| ||||| | ||| ||||||||||||||| ||||||||||
sj07515   2292 GAGCAGGTGGAACTGCCGGGACCTGGGCAGTGGGTGGTGGCTGAGTGCCC 2341
             2 E  Q  V  E  L  P  G  P  G  Q  W  V  V  A  E  C  P  18

            51 ----+----*----+----*----+----*----+----*----+----* 100
            18  A  R  V  D  F  S  G  G  W  S  D  T  P  P  I  A  Y 34
mpm05008  3576 AGCCCGTGTGGATTTCTCTGGGGGCTGGAGTGACACACCGCCCATTGCCT 3625
                ||||||||||||||||||||||||||||||||||| || ||| ||||||
sj07515   2342 GGCCCGTGTGGATTTCTCTGGGGGCTGGAGTGACACGCCACCCCTTGCCT 2391
            19  A  R  V  D  F  S  G  G  W  S  D  T  P  P  L  A  Y 35

           101 ----+----*----+----*----+----*----+----*----+----* 150
            35   E  L  G  G  A  V  L  G  L  A  V  R  V  D  G  R   50
mpm05008  3626 ATGAGCTTGGTGGAGCAGTGTTGGGCCTGGCTGTGCGGGTGGATGGCCGC 3675
               |||||||||| || || ||| |||||||||||||||| ||||| ||||||
sj07515   2392 ATGAGCTTGGCGGGGCTGTGCTGGGCCTGGCTGTGCGAGTGGACGGCCGC 2441
            36   E  L  G  G  A  V  L  G  L  A  V  R  V  D  G  R   51

           151 ----+----*----+----*----+----*----+----*----+----* 200
            51 R  P  I  G  A  K  A  R  R  I  P  E  P  E  L  W  L  67
mpm05008  3676 CGGCCCATCGGGGCCAAAGCACGCCGCATCCCGGAGCCTGAGCTCTGGCT 3725
               ||||||||||| ||||  |||||||||||||||||||||||||| |||||
sj07515   2442 CGGCCCATCGGAGCCAGGGCACGCCGCATCCCGGAGCCTGAGCTGTGGCT 2491
            52 R  P  I  G  A  R  A  R  R  I  P  E  P  E  L  W  L  68

           201 ----+----*----+----*----+----*----+----*----+----* 250
            68  A  V  G  P  R  Q  D  E  M  T  M  R  I  V  C  R  S 84
mpm05008  3726 GGCAGTGGGACCTCGGCAGGATGAGATGACCATGAGGATAGTGTGCCGGA 3775
               ||| ||||| ||||||||||||||||||||  ||| ||||||||||||| 
sj07515   2492 GGCGGTGGGGCCTCGGCAGGATGAGATGACTGTGAAGATAGTGTGCCGGT 2541
            69  A  V  G  P  R  Q  D  E  M  T  V  K  I  V  C  R  C 85

           251 ----+----*----+----*----+----*----+----*----+----* 300
            85   L  D  D  L  R  D  Y  C  Q  P  H  A  P  G  A  L   100
mpm05008  3776 GCCTGGATGACCTGCGGGATTACTGCCAGCCTCATGCCCCAGGGGCCTTG 3825
               |||||| |||||||||||| ||||||||||||||||||||||||||| ||
sj07515   2542 GCCTGGCTGACCTGCGGGACTACTGCCAGCCTCATGCCCCAGGGGCCCTG 2591
            86   L  A  D  L  R  D  Y  C  Q  P  H  A  P  G  A  L   101

           301 ----+----*----+----*----+----*----+----*----+----* 350
           101 L  K  A  A  F  I  C  A  G  I  V  H  L  H  S  E  L  117
mpm05008  3826 CTGAAGGCAGCCTTTATCTGTGCTGGCATTGTGCATCTCCACTCAGAGCT 3875
               |||||||| ||||| |||||||| || || |||||| ||||||| || ||
sj07515   2592 CTGAAGGCGGCCTTCATCTGTGCAGGGATCGTGCATGTCCACTCGGAACT 2641
           102 L  K  A  A  F  I  C  A  G  I  V  H  V  H  S  E  L  118

           351 ----+----*----+----*----+----*----+----*----+----* 400
           118  P  L  L  E  Q  L  L  H  S  F  N  G  G  F  E  L  H 134
mpm05008  3876 CCCTCTGCTTGAACAGTTGTTACACTCCTTTAATGGTGGCTTTGAGCTGC 3925
               ||  |||  ||| ||| || | | | ||||    || |||||||||||||
sj07515   2642 CCAGCTGAGTGAGCAGCTGCTCCGCACCTTCGGGGGCGGCTTTGAGCTGC 2691
           119  Q  L  S  E  Q  L  L  R  T  F  G  G  G  F  E  L  H 135

           401 ----+----*----+----*----+----*----+----*----+----* 450
           135   T  W  S  E  L  P  H  G  S  G  L  G  T  S  S  I   150
mpm05008  3926 ACACGTGGTCAGAGCTGCCGCACGGCTCTGGTCTTGGCACCAGCAGCATC 3975
               |||| ||||| |||||||| ||||||||||| || |||||||||||||||
sj07515   2692 ACACCTGGTCTGAGCTGCCCCACGGCTCTGGCCTGGGCACCAGCAGCATC 2741
           136   T  W  S  E  L  P  H  G  S  G  L  G  T  S  S  I   151

           451 ----+----*----+----*----+----*----+----*----+----* 500
           151 L  A  G  A  A  L  A  A  L  Q  R  A  A  G  R  A  V  167
mpm05008  3976 CTGGCAGGGGCTGCCCTGGCTGCCTTACAGCGGGCTGCAGGCCGGGCAGT 4025
               ||||||||  |||||||||||||||| ||||| || ||||||||||  ||
sj07515   2742 CTGGCAGGCACTGCCCTGGCTGCCTTGCAGCGAGCCGCAGGCCGGGTGGT 2791
           152 L  A  G  T  A  L  A  A  L  Q  R  A  A  G  R  V  V  168

           501 ----+----*----+----*----+----*----+----*----+----* 550
           168  G  T  E  A  L  I  H  A  V  L  H  L  E  Q  V  L  T 184
mpm05008  4026 GGGCACGGAGGCTCTCATCCACGCAGTGCTGCACCTGGAGCAGGTGCTCA 4075
               ||||||||| || || ||||||||||||||||||||||||||||||||||
sj07515   2792 GGGCACGGAAGCCCTGATCCACGCAGTGCTGCACCTGGAGCAGGTGCTCA 2841
           169  G  T  E  A  L  I  H  A  V  L  H  L  E  Q  V  L  T 185

           551 ----+----*----+----*----+----*----+----*----+----* 600
           185   T  G  G  G  W  Q  D  Q  V  S  G  L  M  P  G  I   200
mpm05008  4076 CCACAGGAGGTGGCTGGCAGGACCAAGTCAGTGGCCTAATGCCTGGCATC 4125
               |||| |||||||||||||||||||||||  ||||||||||||||||||||
sj07515   2842 CCACTGGAGGTGGCTGGCAGGACCAAGTAGGTGGCCTAATGCCTGGCATC 2891
           186   T  G  G  G  W  Q  D  Q  V  G  G  L  M  P  G  I   201

           601 ----+----*----+----*----+----*----+----*----+----* 650
           201 K  V  G  R  S  R  A  Q  L  P  L  K  V  E  V  E  E  217
mpm05008  4126 AAAGTGGGGCGCTCCCGGGCCCAGCTGCCCCTCAAGGTGGAGGTGGAGGA 4175
               || ||||||||||||||||| |||||||| || ||||||||||| || ||
sj07515   2892 AAGGTGGGGCGCTCCCGGGCTCAGCTGCCACTGAAGGTGGAGGTAGAAGA 2941
           202 K  V  G  R  S  R  A  Q  L  P  L  K  V  E  V  E  E  218

           651 ----+----*----+----*----+----*----+----*----+----* 700
           218  I  T  V  P  E  G  F  V  Q  K  I  N  D  H  L  L  L 234
mpm05008  4176 AATCACTGTGCCTGAGGGCTTTGTCCAGAAGATCAATGACCATCTGCTCC 4225
                 |||| |||||||||||||||||||||||| |||||||||| |||||| 
sj07515   2942 GGTCACGGTGCCTGAGGGCTTTGTCCAGAAGCTCAATGACCACCTGCTCT 2991
           219  V  T  V  P  E  G  F  V  Q  K  L  N  D  H  L  L  L 235

           701 ----+----*----+----*----+----*----+----*----+----* 750
           235   V  Y  T  G  K  T  R  L  A  R  N  L  L  Q  D  V   250
mpm05008  4226 TGGTTTATACCGGCAAGACCCGATTGGCCCGGAATCTGCTGCAGGACGTG 4275
               |||| || || |||||||||||  |||| ||||| ||||||||||| |||
sj07515   2992 TGGTGTACACTGGCAAGACCCGCCTGGCTCGGAACCTGCTGCAGGATGTG 3041
           236   V  Y  T  G  K  T  R  L  A  R  N  L  L  Q  D  V   251

           751 ----+----*----+----*----+----*----+----*----+----* 800
           251 L  R  N  W  Y  A  R  L  P  V  V  V  Q  N  A  R  R  267
mpm05008  4276 CTGAGGAACTGGTACGCTCGGTTGCCCGTTGTGGTACAGAATGCCCGCAG 4325
               ||||||| |||||| || ||  | || | |||||| |||||||||| |||
sj07515   3042 CTGAGGAGCTGGTATGCCCGACTTCCTGCTGTGGTGCAGAATGCCCACAG 3091
           252 L  R  S  W  Y  A  R  L  P  A  V  V  Q  N  A  H  S  268

           801 ----+----*----+----*----+----*----+----*----+---- 849
           268  L  V  R  Q  T  E  K  C  A  E  A  F  R  Q  G  N   283
mpm05008  4326 ACTGGTGCGACAGACCGAGAAGTGCGCTGAAGCTTTCCGCCAAGGAAAC 4374
                ||||| || || || ||| |||| |||||||  |||||||||||    
sj07515   3092 CCTGGTACGGCAAACTGAGGAGTGTGCTGAAGGCTTCCGCCAAGGGTCT 3140
           269  L  V  R  Q  T  E  E  C  A  E  G  F  R  Q  G  S   284